BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G01060.1 Length=1500 Score E Sequences producing significant alignments: (Bits) Value Ahg486973 jgi|Araly1|486973|fgenesh2_kg.6__107__AT5G01060.1 2418 0.0 Ahg317726 jgi|Araly1|317726|fgenesh1_pm.C_scaffold_3000742 1146 0.0 Ahg333388 jgi|Araly1|333388|fgenesh1_pm.C_scaffold_710000001 869 0.0 Ahg921006 jgi|Araly1|921006|scaffold_102287.1 291 1e-77 > Ahg486973 jgi|Araly1|486973|fgenesh2_kg.6__107__AT5G01060.1 Length=1497 Score = 2418 bits (1309), Expect = 0.0 Identities = 1438/1501 (96%), Gaps = 5/1501 (0%) Strand=Plus/Plus Query 1 ATGGGATGCATTTGCTTCAAGTCTTGGCGCCGATCATCTTCTTCACCGTCGATTACGTCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1 ATGGGATGCATTTGCTTCAAGTCTTGGCGCCGATCATCTTCTTCACCGTCGATTACATCA 60 Query 61 ACGGTCATAGATGATCTCGAAAACGTCAGAGAGTACGATGCCGACGACGACGGAGGACAT 120 |||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||| Sbjct 61 ACGGTCATTGATGATCTAGAAAACGTC--AGAG-ACGATGTCGACGACGACGGAGGACAT 117 Query 121 TATCCGTTGATTTTCCGTGAGTTCAGTTTAGAACAGCTGAGAATCGCCACCGACGGTTTC 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 118 TATCCGTTGATTTTCCGTGAGTTCAGTTTAGAGCAGCTGAGAATCGCCACCGACGGTTTC 177 Query 181 TCCGCCGGAAACATCGTATCGGAGCACAACGATTCGGTACCAAACATCGTCTACAAAGGA 240 |||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct 178 TCCGCCGGAAACGTCGTCTCGGAGCACAATGATTCCGTACCAAACATCGTCTACAAGGGA 237 Query 241 AAACTCGGCGATGGTCGTCGCATCGCCGTCAAACGGTTTCAAAGACTTTCTTGGCCTGAT 300 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 AAACTCGGAGACGGTCGTCGCATCGCCGTCAAACGGTTTCAAAGACTTTCTTGGCCTGAT 297 Query 301 CCTTTCGAATTCATCAATGAAGCACAAGCTGTTGGGAGATTGAGGAGTGAACATATGGCG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 CCTTTCGAATTCATCAATGAAGCACAAGCTGTTGGGAGATTGAGGAGTGAACATATGGCG 357 Query 361 AATTTGATCGGTTGTTGTTGTGATGACAACGAGAGATTACTTGTTGCTGAGTATATGCCT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 AATTTGATCGGTTGTTGTTGTGATGACAACGAGAGATTACTTGTTGCTGAGTATATGCCT 417 Query 421 AATGGAACATTAGCAAAACATCTTTTTCACTGGGAGAAAAGACCCATGAAATGGGAAATG 480 ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 418 AATGGAACACTAGCAAAGCATCTTTTTCACTGGGAGAAAAGACCGATGAAATGGGAAATG 477 Query 481 AGGTTGAAAGTTGCTCTGCATACTGCAAGAGCTTTGGAGTATTGTAATGATAAAGGAATT 540 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 478 AGGTTGAAAGTTGCTCTGCATACCGCAAGAGCTTTGGAGTATTGTAATGATAAAGGAATA 537 Query 541 GATTTATACCATGATCTTAATCCTTACAGGATTATGTTTGATAAGACAGGGATTCCTAAG 600 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 538 GATTTATACCATGATCTTAATCCTTACAGGATTATGTTTGATAAGACGGGGAATCCTAAG 597 Query 601 CTTTCTTGCTTTGGTCTCATGAAGAATAGCCATGAAGGGAAGATTTATAGCACCAACTTA 660 ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| Sbjct 598 CTTTCTTGCTTTGGTCTCATGAAGAATAGTCATGAAGGAAAGAATTATAGCACCAACTTA 657 Query 661 GCTTTTGCTCCTCCCGAGTATTTGCGCCTTGGTACTGTGATAGCGGAGAGCGTCACATTT 720 || |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| Sbjct 658 GCATTTGCTCCTCCCGAGTATTTGCGCCTTGGTACCGTGATACCGGAGAGCGTCCCATTT 717 Query 721 AGCTTTGGAAC-CTTGTTATTGGATCTTATGAGCGGCAGACATATTCCTCCAAACCATGC 779 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 AGCTTTGGAACTCT-GTTATTGGATCTTATGAGCGGCAGACATATTCCTCCAAACCATGC 776 Query 780 ACTTGATTTGTTCCGTGGCAAAAACTATTTGGTGCTAATGGATTCAGCTCTTGATGGTCA 839 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 ACTTGATTTGTTCAGAGGCAAAAACTATTTGGTGCTAATGGATTCAGCTCTTGATGGTCA 836 Query 840 GTTCTCTGATGAAGACAGGACAGAACTAATACACGTAGCTTCTCGATGTTTCAAGACTGA 899 |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| Sbjct 837 GTTCTCTGATGAAGACAGGACAGAACTAATACACATAGCTTCTCGATGTTTGAAGAGTGA 896 Query 900 ACCAGAAGAGAGGCCAAGTATAAAGTTTCTTAAGGCGACTCTTTCTAGACTTCAGAAACG 959 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 ACCTGAAGAGAGGCCAAGTATAAAGTTTCTTAAGGCGACTCTTTCTAGACTTCAGAAACG 956 Query 960 GGCCAAGTTGTGCCCTATTAATGTCAAAAGACCTATGTCTCCTCCATCAAAAAATCTGCC 1019 |||||||| || |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 957 AGCCAAGTTATGTCCTATTAATGTCAAAAGACCTATGTCTCCTCCATCAAACAATCTGCC 1016 Query 1020 TGAAAAGACTAAACCTGCAACAGAGTCATTGAAGTTGACTCCTTTCGGAGATGCATGTTC 1079 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 1017 TGAAAAGACTAAATCTGCAAAAGAGTCATTGAAGTTGACTCCTTTCGGAGATGCGTGTTC 1076 Query 1080 TAGAGCGGATCTAAGTAGTATACATGAACTACTAGAGAAACTAGGGTATGAAGAAGATAA 1139 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct 1077 GAGAGCAGATCTAAGTAGTATACATGAACTGCTAGAGAAACTTGGGTATGAAGAAGATGA 1136 Query 1140 TGGGGTTGGTAACGAGTTTTCATTCCAAATGTGGACCGGCGAAATGCAAGAGAATATGGA 1199 |||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1137 TGGGGTCGGTAACGAGTTTTCATTCCAAATGTGGACGGGTGAAATGCAAGAGAATATGGA 1196 Query 1200 CTACAAGAAGCATGGAGATGCCGCGTTTCTTGCGAAAGATTTTGATACTGCCATTGAATT 1259 |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct 1197 CTACAAGAAGCATGGAGATGTCGCGTTTCTTGCAAAAGATTTTGATACCGCCATTGAATT 1256 Query 1260 CTACACAGAGTTCATGACTGGAGCTCCTACGGTATCACCAACAGTATTGGCAAGAAGGTG 1319 ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| Sbjct 1257 CTACACAGAGTTCATGAGTGGAGCTCCTGCGGTGTCACCAACAGTATTGGCAAGAAGGTG 1316 Query 1320 TCTTTGTTACCTAATGACTGAAATGTTCAGCGAGGCTCTAAGCGATGCGATGCAAGCGCA 1379 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1317 TCTTTGTTACCTAATGACTGAAATGTTCAGCGAGGCTCTAAGTGATGCGATGCAAGCGCA 1376 Query 1380 AGTAGCTTCACCGGAATGGCCAATTCCTCTTTACTTACAAGCGGCTTGTCTCTTCAAGCT 1439 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1377 AGTAGCTTCACCTGAATGGCCAATCCCTCTTTACTTACAAGCAGCTTGTCTCTTCAAGCT 1436 Query 1440 AGAGATGGAAGCTGAAGCTAAAGAAGCACTTAGACATGGTTCTGCTCTTGAGGCTTATTA 1499 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1437 AGAGATGGAAGCTGAAGCTAAAGAAGCAGTTAGACATGGTTCTGCTCTTGAGGCTTATTA 1496 Query 1500 G 1500 | Sbjct 1497 G 1497 > Ahg317726 jgi|Araly1|317726|fgenesh1_pm.C_scaffold_3000742 Length=1521 Score = 1146 bits (620), Expect = 0.0 Identities = 1153/1402 (82%), Gaps = 69/1402 (5%) Strand=Plus/Plus Query 129 GATTTTCCGTGAGTTCAGTTTAGAACAGCTGAGAATCGCCACCGACGGTTTCTCCGCCGG 188 ||||||||| || ||||| || |||||| ||||| |||| || ||||| ||||||||||| Sbjct 159 GATTTTCCGGGAATTCAGCTTGGAACAGTTGAGAGTCGCAACTGACGGATTCTCCGCCGG 218 Query 189 AAACATCGTATCGGAGCACAACGATTCGGTACCAAACATCGTCTACAAAGGAAAACTCGG 248 |||||||| |||||||||||||| ||| || ||||||||||||||||| || ||| Sbjct 219 CAACATCGTGTCGGAGCACAACGAGAGGGTTCCTAACATCGTCTACAAAGGGAAGCTCAA 278 Query 249 CGATGGTCG-TCGCATCGCCGTCAAACGGTTTCAAAGACTTTCTTGGCCTGATCCTTTCG 307 || || | | ||||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct 279 AGACGGAAGAAAG-ATCGCCGTCAAACGGTTTCAAAGGCTTTCATGGCCTGATTCTTTCG 337 Query 308 AATTCATC-AATGAAGCACAAGCTGTTGGGAGATTG-AGGAGTGAACATATGGCGAATTT 365 |||||| | || |||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct 338 AATTCACCGAA-GAAGCACAAGCTGTTGGGAG-GTGTAGGAGTGAGCATATGGCCAATTT 395 Query 366 GATCGGTTGTTGTTGTG-ATGACAACGAGAGATTACTTGTTGCTGAGTATATGCCTAATG 424 |||||||||||| | | | | | ||||||| || || ||||||||||| |||||||||| Sbjct 396 GATCGGTTGTTGCTCAGAAGGTC-ACGAGAGGTTGCTCGTTGCTGAGTACATGCCTAATG 454 Query 425 GAACA-TTAGCAAAACATCTTTTTCACTGGGAGAAAAGACCCATGAAATGGGAAATGAGG 483 ||||| || || || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 455 GAACACTT-GCTAAGCATCTCTTTCACTGGGAGAAAAGACCAATGAAATGGGAAATGAGA 513 Query 484 TTGAA-AGTTGC-TCTGCATACTGCAAGAGCTTTGGAGTATTGTAATGATAAAGGAATTG 541 || || ||||| | | |||||||||| ||| |||||||| |||||||||| ||||| | Sbjct 514 TT-AAGGGTTGCGT-TACATACTGCAACAGCCTTGGAGTACTGTAATGATATGGGAATAG 571 Query 542 ATTTATACCATGATCTTAATC-CTTACAGGATTA-TGTTTGATAAGACAGGGATTCCTAA 599 |||| || || |||||||| | | |||| || || ||||||||||| |||| ||||| Sbjct 572 ATTTGTATCACGATCTTAA-CACCTACA-GAATATTGTTTGATAAGGTTGGGAATCCTAG 629 Query 600 GCTTTCTTGCTTT-GGTCTCATGAAGAATAGCCATGA-AGGG-AAGATTTATAGCACCAA 656 ||| ||||| ||| |||||||||||| ||||| || |||| |||| ||||| ||||| Sbjct 630 GCTGTCTTG-TTTCGGTCTCATGAAGTGTAGCC--GAGAGGGAAAGAGCTATAGTACCAA 686 Query 657 CTTAGCTTTTGCTCCTCCCGAGTATTTGCGCCTTGGTACTGTGATAGCGGAGAGCGTCAC 716 ||| || ||||||||||| || ||||| || || |||||||||||| ||||||| ||||| Sbjct 687 CTTGGCATTTGCTCCTCCTGAATATTTACGTCTAGGTACTGTGATACCGGAGAGTGTCAC 746 Query 717 ATTTAGCTTTGGAACCTTGTTATTGGATCTTATGAGCGGCAGACATATTCCTCCAAACCA 776 ||||||||| || ||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct 747 ATTTAGCTTCGGGACCTTGTTACTGGATCTTATGAGCGGCAGACATATTCCACCTAACCA 806 Query 777 TGCACTTGATTTGTTCCGTGGCAAAAACTATTTGGTGCTAATGGATTCAGCTCTTGATGG 836 |||||||||| | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 807 TGCACTTGATCTATTCCGTGGTAAAAACTATTTGGTGCTAATGGATTCAGCTCTGGATGG 866 Query 837 TCAGTTCTCTGATGAAGACAGGACAGAACTAATACA-CGTAGCTTCTCGATGTTTCAAGA 895 ||| ||||||||||| || || ||||||||||| || | ||||||| || |||||| | Sbjct 867 TCAATTCTCTGATGAGGATAGAACAGAACTAATCCATC-TAGCTTCCCGCTGTTTCCGGC 925 Query 896 CTGAACCAGAAGAGAGGCCAAGTATAAAGTTTCTTAAGGC-GACTCTTTCTAGACTTCAG 954 || ||||||| ||||| ||||||||||||||||||| | | | ||||||| |||||| || Sbjct 926 CTAAACCAGACGAGAGACCAAGTATAAAGTTTCTTATGTCTG-CTCTTTCAAGACTTGAG 984 Query 955 AAACGGGCCAAGTTGTG-CCCTATTAATGTCAA--AAGACCTATGTCTCCTCCATCAAAA 1011 ||||| || |||| || ||| | | ||||| |||| | | |||| | || | Sbjct 985 AAACGAGCTGAGTTATGGCCC-A--AC-GTCAACGAAGAAA-ACAT-TCCTAC-TCCA-- 1035 Query 1012 AATCTGCCTGAAAAGACTAAACCTGCAACA--G-AGTCATTGAAG-TTGACTCCTTTCGG 1067 || | | | |||||||||||||| | || ||||| | ||||| |||||||| Sbjct 1036 --TCAGAC--A-----CTAAACCTGCAACAAAGGAGCCATTGC-GCTTGACCCCTTTCGG 1085 Query 1068 AGATGCATGTTCTAGAGCGGATCTAAGTAGTATACATGAACTACTAGAGAAACTAGGGTA 1127 ||| ||||| | |||| |||||| ||| ||||||| |||||||| |||||||| ||||| Sbjct 1086 AGAAGCATGCTGGAGAGTGGATCTGAGTGGTATACACGAACTACTCGAGAAACTCGGGTA 1145 Query 1128 TGAAGAAGATAATGGGGTTGGTAAC----GAGTTTTCATTCCAAATGTGGACCGG-CGAA 1182 || ||| ||| ||| ||| ||| || ||||| ||||||||||||||||| || | || Sbjct 1146 TGGAGAGGATGATGTGGT-GGTCACAAATGAGTTCTCATTCCAAATGTGGACGGGTC-AA 1203 Query 1183 ATGCAAGAGAATATGGACTACAAGAAGCATGGAGATGCCGCGTTTCTTGCGAAAGATTTT 1242 ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||| Sbjct 1204 ATGCAAGAGAATATGGATTACAAGAAGCATGGAGATGCCGCATTTCGTGCTAAAGATTTT 1263 Query 1243 GATACTGCCATTGAATTCTACACAGAGTTCATGACTGGAGCTCCTAC-GGTATCACCAAC 1301 || || || || ||||| |||||||||||||||| |||||| || | |||||||||||| Sbjct 1264 GAAACAGCAATCGAATTTTACACAGAGTTCATGAGTGGAGCACC-AGTGGTATCACCAAC 1322 Query 1302 AGTATTGGCAAGAAGGTGTCTTTGTTACCTAATGA-CTGAAATGTTCAGCGAGGCTCTAA 1360 |||||| || ||| ||||||| ||||||||||||| || | |||||| |||||||||||| Sbjct 1323 AGTATTAGCCAGACGGTGTCTATGTTACCTAATGAGCT-ATATGTTCCGCGAGGCTCTAA 1381 Query 1361 GCGATGCGATGCAAGCGCAAGTAGCTTCACCGGAATGGCCAATTC-CTCTTTACTTACAA 1419 | |||||||||||||| || || || || || || | |||| | |||| ||||||||| Sbjct 1382 GTGATGCGATGCAAGCTCAGGTCGCATCGCCAGAGTTTTCAAT-CGCTCTCTACTTACAA 1440 Query 1420 GCGGCTTGTCTCTTCAAGCTAGAGA-TGGAAGCTGAAGCTAAAGAAGCACTTAGACATGG 1478 |||||||||| || ||||| | || |||| ||||||||||||||||| ||||||||||| Sbjct 1441 TCGGCTTGTCTTTTAAAGCTTG-GAATGGAGGCTGAAGCTAAAGAAGCTCTTAGACATGG 1499 Query 1479 TTCTGCTCTTGAGGCTTATTAG 1500 ||| |||| || |||| |||| Sbjct 1500 CTCTTCTCTCGAAGCTTTTTAG 1521 > Ahg333388 jgi|Araly1|333388|fgenesh1_pm.C_scaffold_710000001 Length=1407 Score = 869 bits (470), Expect = 0.0 Identities = 1024/1277 (80%), Gaps = 96/1277 (8%) Strand=Plus/Plus Query 129 GATTTTCCGTGAGTTCAGTTTAGAACAGCTGAGAATCGCCACCGACGGTTTCTCCGCCGG 188 ||||||||| || || || || |||||| ||||| |||| || ||||| ||||||||||| Sbjct 117 GATTTTCCGGGAATTTAGCTTGGAACAGTTGAGAGTCGCAACTGACGGATTCTCCGCCGG 176 Query 189 AAACATCGTATCGGAGCACAACGATTCGGTACCAAACATCGTCTACAAAGGAAAACTCGG 248 |||||||| |||||||||||||| ||| || ||||||||||||||||| | ||| Sbjct 177 CAACATCGTGTCGGAGCACAACGAAAGGGTTCCTAACATCGTCTACAAAGGGCAGCTCAA 236 Query 249 CGATGGTCG-TCGCATCGCCGTCAAACGGTTTCAAAGACTTTCTTGGCCTGATCCTTTCG 307 ||| || | | ||||| ||||| |||||| |||| ||||| ||||||||| |||||| Sbjct 237 CGACGGAAGAAAG-ATCGCTGTCAAGCGGTTTAAAAGGCTTTCATGGCCTGATTCTTTCG 295 Query 308 AATTCATC-AATGAAGCACAAGCTGTTGGGAGATTG-AGGAGTGAACATATGGCGAATTT 365 |||||||| || ||||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct 296 AATTCATCGAA-GAAGCACAAGCTGTTGGGAGA-TGTAGGAGTGAGCATATGGCTAATTT 353 Query 366 GATCGGTTGTTGTTGTG-ATGACAACGAGAGATTACTTGTTGCTGAGTATATGCCTAATG 424 |||||||||||| | | | | | ||||||| || || ||||||||||| |||||||||| Sbjct 354 GATCGGTTGTTGCTCAGAAGGTC-ACGAGAGGTTGCTCGTTGCTGAGTACATGCCTAATG 412 Query 425 GAACA-TTAGCAAAACATCTTTTTCACTGGGAGAAAAGACCCATGAAATGGGAAATGAGG 483 ||||| || || || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 413 GAACACTT-GCTAAGCATCTCTTTCACTGGGAGAAAAGACCAATGAAATGGGAAATGAGA 471 Query 484 TTGAA-AGTTGC-TCTGCATACTGCAAGAGCTTTGGAGTATTGTAATGATAAAGGAATTG 541 || || ||||| | | |||||||||| ||| |||||||| |||||||||| ||||| | Sbjct 472 TT-AAGGGTTGCGT-TACATACTGCAACAGCCTTGGAGTACTGTAATGATATGGGAATAG 529 Query 542 ATTTATACCATGATCTTAATC-CTTACAGGATTA-TGTTTGATAAGACAGGGATTCCTAA 599 |||| || ||||||||||| | | |||| || || ||||||||||| |||| ||||| Sbjct 530 ATTTGTATCATGATCTTAA-CACCTACA-GAATATTGTTTGATAAGGTTGGGAATCCTAG 587 Query 600 GCTTTCTTGCTTT-GGTCTCATGAAGAATAGCCATGA-AGGG-AAGATTTATAGCACCAA 656 ||| ||||| ||| |||||||||||| ||||| || |||| |||| ||||| ||||| Sbjct 588 GCTGTCTTG-TTTCGGTCTCATGAAGTGTAGCC--GAGAGGGAAAGAGCTATAGTACCAA 644 Query 657 CTTAGCTTTTGCTCCTCCCGAGTATTTGCGCCTTGGTACTGTGATAGCGGAGAGCGTCAC 716 ||| || ||||||||||| || ||||| || || |||||||||||| ||||||| ||||| Sbjct 645 CTTGGCATTTGCTCCTCCTGAATATTTACGTCTAGGTACTGTGATACCGGAGAGTGTCAC 704 Query 717 ATTTAGCTTTGGAACCTTGTTATTGGATCTTATGAGCGGCAGACATATTCCTCCAAACCA 776 ||||||||| || ||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct 705 ATTTAGCTTCGGGACCTTGTTACTGGATCTTATGAGCGGCAGACATATTCCACCTAACCA 764 Query 777 TGCACTTGATTTGTTCCGTGGCAAAAACTATTTGGTGCTAATGGATTCAGCTCTTGATGG 836 |||||||||| | ||||||| | || |||| | ||| | | ||| |||| Sbjct 765 TGCACTTGATCTATTCCGTG-CT----CTGGATGGT-C-AAT---T-C---TCT-GATG- 808 Query 837 TCAGTTCTCTGATGAAGACAGGACAGAACTAATACA-CGTAGCTTCTCGATGTTTCAAGA 895 || ||| | || | |||||||||| || | ||||||| || |||||| | Sbjct 809 --AG------GAT-A-GA-A---CAGAACTAATCCATC-TAGCTTCCCGCTGTTTCCGGC 853 Query 896 CTGAACCAGAAGAGAGGCCAAGTATAAAGTTTCTTAAGGC-GACTCTTTCTAGACTTCAG 954 || ||||||| ||||| ||||||||||||||||||| | | | ||||||| |||||| || Sbjct 854 CTAAACCAGACGAGAGACCAAGTATAAAGTTTCTTATGTCTG-CTCTTTCAAGACTTGAG 912 Query 955 AAACGGGCCAAGTTGTG-CCCTATTAATGTCAA--AAGACCTATGTCTCCTCCATCAAAA 1011 ||||| || |||| || ||| | | ||||| |||| | | |||| | || | Sbjct 913 AAACGAGCTGAGTTATGGCCC-A--AC-GTCAACGAAGAAA-ACAT-TCCTAC-TCCA-- 963 Query 1012 AATCTGCCTGAAAAGACTAAACCTGCAACA--G-AGTCATTGAAGTT-GACTCCTTTCGG 1067 || | | | |||||||||||||| | || ||||| ||| ||| |||||||| Sbjct 964 --TCAGAC--A-----CTAAACCTGCAACAAAGGAGCCATTGC-GTTTGACCCCTTTCGG 1013 Query 1068 AGATGCATGTTCTAGAGCGGATCTAAGTAGTATACATGAACTACTAGAGAAACTAGGGTA 1127 ||| ||||| | |||| |||||| ||| ||||||| |||||||| |||||||| ||||| Sbjct 1014 AGAAGCATGCTGGAGAGTGGATCTGAGTGGTATACACGAACTACTCGAGAAACTCGGGTA 1073 Query 1128 TGAAGAAGATAATGGGGTTGGTAAC----GAGTTTTCATTCCAAATGTGGACCGG-CGAA 1182 || ||| ||| ||| ||| ||| || ||||| ||||||||||||||||| || | || Sbjct 1074 TGGAGAGGATGATGTGGT-GGTCACAAATGAGTTCTCATTCCAAATGTGGACGGGTC-AA 1131 Query 1183 ATGCAAGAGAATATGGACTACAAGAAGCATGGAGATGCCGCGTTTCTTGCGAAAGATTTT 1242 ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||| Sbjct 1132 ATGCAAGAGAATATGGATTACAAGAAGCATGGAGATGCCGCATTTCGTGCTAAAGATTTT 1191 Query 1243 GATACTGCCATTGAATTCTACACAGAGTTCATGACTGGAGCTCCTAC-GGTATCACCAAC 1301 || || || || ||||| |||||||||||||||| |||||| || | |||||||||||| Sbjct 1192 GAAACAGCGATCGAATTTTACACAGAGTTCATGAGTGGAGCACC-AGTGGTATCACCAAC 1250 Query 1302 AGTATTGGCAAGAAGGTGTCTTTGTTACCTAATGA-CTGAAATGTTCAGCGAGGCTCTAA 1360 |||||| || ||| ||||||| ||||||||||||| || | |||||| |||||||||||| Sbjct 1251 AGTATTAGCCAGACGGTGTCTATGTTACCTAATGAGCT-ATATGTTCTGCGAGGCTCTAA 1309 Query 1361 GCGATGC-GATGCAAGC 1376 | ||||| ||||||||| Sbjct 1310 GTGATGCTGATGCAAGC 1326 > Ahg921006 jgi|Araly1|921006|scaffold_102287.1 Length=227 Score = 291 bits (157), Expect = 1e-77 Identities = 193/210 (92%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 1268 AGTTCATGACTGGAGCTCCTACGGTATCACCAACAGTATTGGCAAGAAGGTGTCTTTGTT 1327 ||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct 17 AGTTCATGAGTGGAGCTCCTACAATGTCATCAACAGTATTGGCAAGAAGGTGTCTTTGTT 76 Query 1328 ACCTAATGACTGAAATGTTCAGCGAGGCTCTAAGCGATGCGATGCAAGCGCAAGTAGCTT 1387 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 77 ACCTAATGACTGAAATGTTCAGTGAGGCTCTAAGCGATGCGATGCAAGCGCAAGTAGCTT 136 Query 1388 CACCGGAATGGCCAAT--TCC-TCT-TTACTTACAAGCGGCTTGTCTCTTCAAGCTAGAG 1443 ||| |||||||||||| ||| ||| ||| ||||| | || ||||||||| ||||| ||| Sbjct 137 CACTGGAATGGCCAATAATCCCTCTCTTATTTACATGTGGTTTGTCTCTTGAAGCTCGAG 196 Query 1444 ATGGAAGCTGAAGCTAAAGAAGCACTTAGA 1473 |||||||||||||||||||||||||||||| Sbjct 197 ATGGAAGCTGAAGCTAAAGAAGCACTTAGA 226 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56145021130 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5