BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G01330.1
Length=2053
Score E
Sequences producing significant alignments: (Bits) Value
Ahg349471 jgi|Araly1|349471|fgenesh1_pg.C_scaffold_6000064 2704 0.0
Ahg486945 jgi|Araly1|486945|fgenesh2_kg.6__79__AT5G01320.1 2555 0.0
Ahg491381 jgi|Araly1|491381|fgenesh2_kg.7__814__AT4G33070.1 1917 0.0
> Ahg349471 jgi|Araly1|349471|fgenesh1_pg.C_scaffold_6000064
Length=1779
Score = 2704 bits (1464), Expect = 0.0
Identities = 1677/1782 (94%), Gaps = 6/1782 (0%)
Strand=Plus/Plus
Query 56 ATGGACGTCCGAAGTCTACCAAGCAACGGCGTCGCAACAATCCAAGACTCCGCTCCCACC 115
|||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||
Sbjct 1 ATGGACGTGGGAAGTCTACCAAGTAACTCCGTCGCGACAATCCAAGACTCCGCTCCCACC 60
Query 116 GCCGCAACCATACTCGGCTCCTCTGC-AGCGACTCTTGGACGTCACTTATCCCGCCGTCT 174
||||| ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||
Sbjct 61 ACCGCAGCCATACTCGGCTCCTCT-CAAGCGACTCTCGGACGTCACTTAGCCCGCCGTCT 119
Query 175 TGTCCAAGCCGGAGTCACCGACATTTTCACTGTTCCCGGTGATTTCAACCTATCTCTGCT 234
||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||
Sbjct 120 TGTCCAAGCCGGAGTCAGCGATATTTTCTCTGTTCCCGGGGATTTCAACCTATCTCTGCT 179
Query 235 TGACCAGCTCATCGCCAACCCGGAGCTCAACAACATCGGGTGCTGTAACGAGCTAAACGC 294
|||||||||||||||| |||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 180 TGACCAGCTCATCGCCGACCCGGAGCTCAACAACATCGGCTGCTGCAACGAGCTTAACGC 239
Query 295 CGGTTACGCCGCCGATGGATACGCTCGATCTCGTGGAGTCGGTGCTTGCGTCGTGACTTT 354
|| ||||| ||||| || |||||||||||||||||||| |||||||| |||||||||||
Sbjct 240 TGGATACGCTGCCGACGGTTACGCTCGATCTCGTGGAGTTGGTGCTTGTGTCGTGACTTT 299
Query 355 CACCGTTGGTGGACTCAGCGTTTTGAACGCTATCGCTGGTGCGTACAGTGAGAACCTACC 414
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||
Sbjct 300 CACCGTTGGTGGACTCAGCGTTTTGAACGCGATCGCTGGTGCATACAGTGAGAATCTGCC 359
Query 415 AGTTATATGTATCGTTGGAGGTCCTAACTCCAACGATTTTGGCACTAACCGGATTCTTCA 474
||| || |||||||| ||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 360 AGTGATCTGTATCGTCGGAGGTCCTAACTCCAATGACTTTGGCACAAACCGGATTCTTCA 419
Query 475 TCACACCATTGGTTTACCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAAACTGTTACTTG 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TCACACCATTGGTTTACCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAAACTGTTACTTG 479
Query 535 CTATCAGGCTGTGGTGAACCATTTAGAGGATGCTCATGAACAGATCGACAAGGCGATAGC 594
|||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||||| |
Sbjct 480 CTATCAGGCTGTGGTGAATCATTTGGAGGATGCTCATGAACAAATCGACATGGCGATATC 539
Query 595 AACAGCTCTGAGAGAGAGCAAGCCTGTGTACATTAGCATCAGCTGTAACTTAGCTGCCAT 654
||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 540 AACAGCTCTGAAAGAAAGCAAGCCTGTGTACATTAGCGTCAGCTGTAACTTAGCTGCAAC 599
Query 655 TCCTCATCCTACATTTGCTAGTTATCCTGTCCCTTTTGACCTAACTCCAAGGTTGAGCAA 714
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TCCTCATCCTACATTTGCTCGTTATCCTGTCCCTTTTGACCTAACTCCAAGGTTGAGCAA 659
Query 715 CAAGGATTGTTTAGAAGCTGCCGTGGAAGCAACATTGGAGTTTCTAAACAAGGCCGTGAA 774
|||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 660 CAAGAATTGTTTAGAAGCTGCGGTGGAAGCAACATTGGAGTTTCTAAACAAGGCGGTGAA 719
Query 775 GCCCGTTATGGTCGGTGGTCCCAAGTTGCGTGTGGCTAAAGCTAGGGATGCCTTTGTGGA 834
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 GCCCGTCATGGTCGGTGGTCCCAAGTTGCGTGTGGCTAAAGCTAGGGATGCCTTTGTGGA 779
Query 835 GCTAGCTGATGCTTCAGGCTA-CCCCGTGGCAGTGATGCCATCTGCCAAAGGCTTTGTCC 893
||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |
Sbjct 780 GCTAGCTGATGCTTCAGGCTATCCCC-TGGCAGTGATGCCATCTGCAAAAGGCTTTGTAC 838
Query 894 CAGAGAACCATCCTCATTTCATTGGCACTTACTGGGGAGCAGTGAGCACTCTTTTCTGCT 953
||||| |||||||||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct 839 CAGAGGACCATCCTCACTTCATTGGTACTTACTGGGGAGCAGTGAGCACCCTTTTCTGCA 898
Query 954 CTGAGATTGTCGAGTCCGCGGATGCTTACATCTTCGCAGGTCCAATCTTCAACGACTACA 1013
|||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 899 ATGAGATTGTCGAATCTGCGGATGCTTACATTTTCGCAGGTCCAATATTCAACGACTACA 958
Query 1014 GCTCCGTTGGTTACTCACTTCTCCTCAAGAAAGAAAAAGCCATCATTGTGCATCCTGATA 1073
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GCTCCGTGGGTTACTCACTTCTCCTCAAGAAAGAAAAAGCCATCATTGTGCATCCTGACC 1018
Query 1074 GTGTCGTTGTGGCTAATGGTCCTACCTTTGGTTGCGTTCGGATGAGCGAATTCTTCAGGG 1133
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1019 GCGTCGTTGTGGCTAATGGTCCTACGTTTGGTTGCGTTCGGATGAGCGAATTCTTCAGGG 1078
Query 1134 AGTTGGCTAAGAGGGTGAAACCTAACAAGACGGCTTATGAGAACTACCATAGAATCTTTG 1193
||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct 1079 AGTTGGCTAAGAGGGTGAAACGTAACGTGACGGCTTATGAGAACTACCATAGGATCTTTG 1138
Query 1194 TCCCTGAAGGTAAGCCTTTGAAATGCAAACCAAGAGAGCCTTTGAGAATCAACGCAATGT 1253
|||||||||||||||| |||||||||||| | |||||| || ||||||||||||||||||
Sbjct 1139 TCCCTGAAGGTAAGCCATTGAAATGCAAATCTAGAGAGGCTCTGAGAATCAACGCAATGT 1198
Query 1254 TCCAACACATTCAGAAGATGCTCTCTAATGAAACCGCTGTGATTGCTGAAACTGGTGATT 1313
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 1199 TCCAACACATTCAGAAGATGCTCTCTAGTGAAACTGCTGTGATTGCTGAAACTGGTGATT 1258
Query 1314 CTTGGTTCAATTGTCAGAAACTTAAGCTGCCTAAAGGATGTGGGTACGAGTTTCAAATGC 1373
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1259 CTTGGTTCAATTGCCAGAAACTTAGGCTGCCTAAAGGATGTGGGTACGAGTTTCAAATGC 1318
Query 1374 AGTATGGATCAATTGGTTGGTCTGTTGGTGCGACTCTAGGATACGCTCAAGCAACACCGG 1433
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1319 AGTATGGATCAATTGGTTGGTCTGTTGGTGCGACTCTAGGATACGCACAAGCATCACCAA 1378
Query 1434 AGAAGA-GAGTGTTGTCTTTCATTGGAGACGGAAGTTTCCAAGTGACGGCTCAGGACGTT 1492
| || | |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1379 ATAA-ACGAGTGTTGTCTTTCATCGGAGACGGGAGTTTCCAAGTGACGGCTCAGGACGTA 1437
Query 1493 TCCACAATGATTCGTAACGGACAGAAGACCATCATCTTCCTGATCAACAACGGTGGCTAC 1552
||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1438 TCCACGATGATTCGTAACGGACAGAAGACTATCATCTTCCTGATTAACAACGGTGGCTAC 1497
Query 1553 ACCATTGAAGTTGAGATTCATGATGGTCCTTACAATGTGATCAAGAATTGGAACTACACT 1612
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1498 ACCATTGAAGTTGAGATTCATGATGGTCCTTACAATGTGATCAAGAACTGGAACTACACT 1557
Query 1613 GGTCTTGTCGATGCTATTCATAATGGTGAAGGCAAATGCTGGACCACAAAGGTGAGATAC 1672
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1558 GGTCTTGTCGATGCCATTCATAACGGTGAAGGCAAATGCTGGACCACAAAGGTGAGATAC 1617
Query 1673 GAGGAGGAGTTAGTGGAAGCGATTAACACGGCGACATTGGAGAAGAAAGATAGTCTTTGT 1732
||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||
Sbjct 1618 GAGGAGGAGTTAGTGGAAGCGATTAACACAGCTACATCGGAGAAGAAAGATAGTCTTTGT 1677
Query 1733 TTCATTGAAGTGATTGTTCACAAGGATGATACGAGCAAAGAGTTGCTTGAGTGGGGCTCT 1792
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1678 TTCATTGAAGTGATTGTTCACAAAGATGATACGAGCAAAGAGTTGCTTGAGTGGGGCTCT 1737
Query 1793 CGCGTCTCAGCTGCTAATGGTCGTCCTCCCAATCCTCAGTAG 1834
||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1738 CGCATCTCAGCTGCTAATGGTCGTCCTCCCAATCCTCAGTAG 1779
> Ahg486945 jgi|Araly1|486945|fgenesh2_kg.6__79__AT5G01320.1
Length=1952
Score = 2555 bits (1383), Expect = 0.0
Identities = 1685/1830 (92%), Gaps = 23/1830 (1%)
Strand=Plus/Plus
Query 59 GACGTCCGAAGTCTACCAAGCAACGGCGTCGCAACAATCCAAGACTCCGCTCCCACCGCC 118
|||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 49 GACGTCGGAAGTCCCCCAAGCAACGCCGTCGCAACAATCCAAGACTCCGCTCCCACCACC 108
Query 119 GCAACCATACTCGGCTCCTCTGCAGCGACTCTTGGACGTCACTTATCCCGCCGTCTTGTC 178
| || | | || | | | ||||||||| |||||||||||| ||||||||||||||
Sbjct 109 G----CA-A--C--CT-C-C-GAAGCGACTCTCGGACGTCACTTAGCCCGCCGTCTTGTC 156
Query 179 CAAGCCGGAGTCACCGACATTTTCACTGTTCCCGGTGATTTCAACCTATCTCTGCTTGAC 238
|||||||||||||||||||||||| |||||||||||||||| |||||| |||| ||||||
Sbjct 157 CAAGCCGGAGTCACCGACATTTTCTCTGTTCCCGGTGATTTTAACCTAACTCTTCTTGAC 216
Query 239 CAGCTCATCGCC-AACCCGGAGCTCAACAACATCGGGTGCTGTAACGAGCTAAACGCCGG 297
|| ||||||||| || || ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 217 CACCTCATCGCCGAA-CCAGAGCTCAACAACATCGGATGCTGCAACGAGCTTAACGCCGG 275
Query 298 TTACGCCGCCGATGGATACGCTCGATCTCGTGGAGTCGGTGCTTGCGTCGTGACTTTCAC 357
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 276 TTACGCCGCCGATGGTTACGCTCGATCTCGTGGAGTCGGTGCTTGCGTCGTGACCTTCAC 335
Query 358 CGTTGGTGGACTCAGCGTTTTGAACGCTATCGCTGGTGCGTACAGTGAGAACCTACCAGT 417
||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct 336 CGTTGGTGGACTCAGCGTTTTGAACGCGATCGCAGGTGCATACAGTGAGAATCTGCCAGT 395
Query 418 TATATGTATCGTTGGAGGTCCTAACTCCAACGATTTTGGCACTAACCGGATTCTTCATCA 477
|| |||||||| ||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct 396 GATCTGTATCGTCGGAGGTCCTAACTCCAATGACTTTGGCACAAACCGGATTCTTCATCA 455
Query 478 CACCATTGGTTTACCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAAACTGTTACTTGCTA 537
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 456 CACCATTGGTTTACCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAGACTGTTACTTGCTA 515
Query 538 TCAGGCTGTGGTGAACCATTTAGAGGATGCTCATGAACAGATCGACAAGGCGATAGCAAC 597
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 516 TCAGGCTGTGGTGAACAATTTGGAGGATGCTCATGAACAGATCGACAAGGCGATATCAAC 575
Query 598 AGCTCTGAGAGAGAGCAAGCCTGTGTACATTAGCATCAGCTGTAACTTAGCTGCCATTCC 657
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 576 AGCTTTGAAAGAGAGCAAGCCTGTGTACATTAGCATCAGCTGTAACTTAGCTGCGACTCC 635
Query 658 TCATCCTACATTTGCTAGTTATCCTGTCCCTTTTGACCTAACTCCAAGGTTGAGCAACAA 717
|||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||
Sbjct 636 TCATCCTACATTTGCTCGTGATCCTGTCCCTTTTGCCCTAACTCCAAGGATGAGCAACAA 695
Query 718 GGATTG-TTTAGAAGCTGCCGTGGAAGCAACATTGGAGTTTCTAAACAAGGCCGTGAAGC 776
| || | |||||||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct 696 G-ATGGGTTTAGAAGCTGCGGTGGAAGCAACATTGGAGTTTCTGAACAAGGCAGTGAAGC 754
Query 777 CCGTTATGGTCGGTGGTCCCAAGTTGCGTGTGGCTAAAGCTAGGGATGCCTTTGTGGAGC 836
| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 755 CAGTTATGGTTGGTGGTCCAAAGTTGCGTGTGGCTAAAGCAAGTGATGCCTTTGTGGAGC 814
Query 837 TAGCTGATGCTTCAGGCTACCC-CGTGGCAGTGATGCCATCTGCCAAAGGCTTTGTCCCA 895
|||||||||||||||||||||| | | || |||||||| || || ||||||||||| |||
Sbjct 815 TAGCTGATGCTTCAGGCTACCCTC-TCGCGGTGATGCCTTCGGCAAAAGGCTTTGTACCA 873
Query 896 GAGAACCATCCTCATTTCATTGGCACTTACTGGGGAGCAGTGAGCACTCTTTTCTGCTCT 955
|||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 874 GAGAACCATCCTCACTTCATTGGTACTTACTGGGGAGCAGTGAGCACTCCGTTCTGCTCT 933
Query 956 GAGATTGTCGAGTCCGCGGATGCTTACATCTTCGCAGGTCCAATCTTCAACGACTACAGC 1015
||||||||||| || || ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 934 GAGATTGTCGAATCTGCAGATGCTTACATTTTCGCAGGTCCAATATTCAACGACTACAGC 993
Query 1016 TCCGTTGGTTACTCACTTCTCCTCAAGAAAGAAAAAGCCATCATTGTGCATCCTGATAGT 1075
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 994 TCCGTGGGTTACTCACTTCTCCTCAAGAAAGAAAAAGCCATCATTGTGCATCCTGACCGC 1053
Query 1076 GTCGTTGTGGCTAATGGTCCTACCTTTGGTTGCGTTCGGATGAGCGAATTCTTCAGGGAG 1135
||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| |||||
Sbjct 1054 GTCGTTGTGGCTAATGGTCCTACGTTTGGTTGCGTTCTGATGAGCGATTTCTTTAGGGAA 1113
Query 1136 TTGGCTAAGAGGGTGAAACCTAACAAGACGGCTTATGAGAACTACCATAGAATCTTTGTC 1195
||||||||||||||||| | |||| |||| |||||||||||||||||||| |||||||||
Sbjct 1114 TTGGCTAAGAGGGTGAAGCGTAACGAGACCGCTTATGAGAACTACCATAGGATCTTTGTC 1173
Query 1196 CCTGAAGGTAAGCCTTTGAAATGCAAACCAAGAGAGCCTTTGAGAATCAACGCAATGTTC 1255
|||||||||||||| |||||||||||||| || || ||||||||| ||||||||||||||
Sbjct 1174 CCTGAAGGTAAGCCATTGAAATGCAAACCTAGGGAACCTTTGAGAGTCAACGCAATGTTC 1233
Query 1256 CAACACATTCAGAAGATGCTCTCTAATGAAACCGCTGTGATTGCTGAAACTGGTGATTCT 1315
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1234 CAACACATTCAGAAGATGCTCTCTAGTGAAACCGCTGTGATTGCTGAAACTGGTGATTCT 1293
Query 1316 TGGTTCAATTGTCAGAAACTTAAGCTGCCTAAAGGATGTGGGTACGAGTTTCAAATGCAG 1375
||||||||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||
Sbjct 1294 TGGTTCAATTGCCAGAAGCTAAAGCTGCCTAAAGGATGTGGGTATGAGTTTCAGATGCAG 1353
Query 1376 TATGGATCAATTGGTTGGTCTGTTGGTGCGACTCTAGGATACGCTCAAGCAACACCGGAG 1435
|||||||||||||| |||||||||||||||||| ||||||| || || ||| |||| |||
Sbjct 1354 TATGGATCAATTGGCTGGTCTGTTGGTGCGACTTTAGGATATGCACAGGCATCACCAGAG 1413
Query 1436 AAGAGAGTGTTGTCTTTCATTGGAGACGGAAGTTTCCAAGTGACGGCTCAGGACGTTTCC 1495
|||||||||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct 1414 AAGAGAGTGTTGTCTTTCATCGGAGACGGGAGTTTCCAAGTGACTGCTCAGGACATATCT 1473
Query 1496 ACAATGATTCGTAACGGACAGAAGACCATCATCTTCCTGATCAACAACGGTGGCTACACC 1555
|| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||
Sbjct 1474 ACGATGATTCGTAACGGACAGAAGACGATCATCTTCTTGATTAACAACGGTGGCTACACC 1533
Query 1556 ATTGAAGTTGAGATTCATGATGGTCCTTACAATGTGATCAAGAATTGGAACTACACTGGT 1615
|| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1534 ATAGAAGTGGAGATTCATGATGGTCCTTACAATGTGATCAAGAACTGGAACTACACTGGT 1593
Query 1616 CTTGTCGATGCTATTCATAATGGTGAAGGCAAATGCTGGACCACAAAGGTGAGATACGAG 1675
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1594 CTTGTCGATGCTATTCATAACGGTGAAGGCAAATGCTGGACCACAAAGGTGAGATACGAG 1653
Query 1676 GAGGAGTTAGTGGAAGCGATTAACACGGCGACATTGGAGAAGAAAGATAGTCTTTGTTTC 1735
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1654 GAGGAGTTAGTGGAAGCGATTAAGACCGCGACATTGGAGAAGAAAGATAGTCTTTGTTTC 1713
Query 1736 ATTGAAGTGATTGTTCACAAGGATGATACGAGCAAAGAGTTGCTTGAGTGGGGCTCTCGC 1795
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1714 ATTGAAGTGATTGTTCACAAAGATGATACGAGCAAAGAGTTGCTTGAGTGGGGCTCTCGC 1773
Query 1796 GTCTCAGCTGCTAATGGTCGTCCTCCCAATCCTCAGTAGAAGCAAGAGAAAAGAAACGAA 1855
||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1774 GTCGCTGCTGCTAATGGTCGTCCTCCCAATCCCCAGTAGAAGCAAGAGAAC-----CGAA 1828
Query 1856 TCTTGAGTGTCGCTCAAGCATCTATCGTTT 1885
|||||||||| |||||| ||||| ||||||
Sbjct 1829 TCTTGAGTGTGGCTCAACCATCTGTCGTTT 1858
> Ahg491381 jgi|Araly1|491381|fgenesh2_kg.7__814__AT4G33070.1
Length=2059
Score = 1917 bits (1038), Expect = 0.0
Identities = 1550/1798 (86%), Gaps = 31/1798 (2%)
Strand=Plus/Plus
Query 59 GACGTCCGAAGTCTACCAAGCAACGGCGTCGCAACAATCCA-AGACTCCGCTCCCACCGC 117
|||||| | |||| ||||| | || |||| |||||||||| | |||| | ||| || |
Sbjct 92 GACGTCGGTAGTCCACCAAACGGCGCCGTCTCAACAATCCACA-ACTCTGTTCCTTCCTC 150
Query 118 CGCAACCATACTCGGCTCCTC-TGC-A-GCGACTCTTGGACGTCACTTATCCCGCCGTCT 174
||| | | || || | ||| ||| | ||||| | || ||| || || | ||||||||
Sbjct 151 CGCTATC--AC-CGTCAACTCATGCGATTCGACTATCGGTCGTTACATAGCTCGCCGTCT 207
Query 175 TGTCCAAGCCGGAGTCACCGACATTTTCACTGTTCCCGGTGATTTCAACCT-ATCTCTGC 233
||||||||||| || ||||| || ||| |||||||||| ||||||||||| | || |||
Sbjct 208 CGTCCAAGCCGGCGTGACCGATATCTTCTCTGTTCCCGGCGATTTCAACCTCA-CTTTGC 266
Query 234 TTGACCAGCTCATCGCCAACCCGGAGCTCAA-CAACATCGGGTGCTGTAACGAGCTAAAC 292
|||| || ||||| || | |||||||| || | ||||| || ||||||||||| |||
Sbjct 267 TTGATCACCTCATGGCTGAGCCGGAGCTGAATC-TGATCGGCTGTTGTAACGAGCTTAAC 325
Query 293 GCCGGTTACGCCGCCGATGGATACGCTCGATCTCGTGGAGTCGGTGCTTGCGTCGTGACT 352
||||||||||| ||||| || |||||| |||||||||||||||| |||||||| |||||
Sbjct 326 GCCGGTTACGCTGCCGACGGTTACGCTAGATCTCGTGGAGTCGGCGCTTGCGTTGTGACC 385
Query 353 TTCACCGTTGGTGGACTCAGCGTTTTGAACGCTATCGCTGGTGCGTACAGTGAGAACCTA 412
|||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 386 TTCACCGTTGGTGGACTCAGCGTTTTGAACGCGATCGCTGGTGCTTACAGCGAGAATCTT 445
Query 413 CCAG-TTATATGTATCGTTGGAGGTCCTAACTCCAACGATTTTGGCACTAACCGGATTCT 471
|| | |||| |||||||| |||||||||||||| ||||||| |||||| |||||||||||
Sbjct 446 CC-GCTTATCTGTATCGTCGGAGGTCCTAACTCTAACGATTATGGCACCAACCGGATTCT 504
Query 472 TCATCACACCATTGGTTTACCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAAACTGTTAC 531
|||||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 505 TCATCACACCATCGGATTACCTGATTTTAGCCAAGAGCTTAGGTGCTTCCAAACGGTGAC 564
Query 532 TTGCTATCAGGCTGTGGTGAACCATTTAGAGGATGCTCATGAACAGATCGACA-AGGCGA 590
||| |||||||| ||||||||| |||| |||||||||||||||||||| || | | ||||
Sbjct 565 TTGTTATCAGGCGGTGGTGAACAATTTGGAGGATGCTCATGAACAGATTGATATA-GCGA 623
Query 591 TAGCAACAGCTCTGAGAGAGAGCAAGCCTGTGTACATTAGCATCAGCTGTAACTTAGCTG 650
|| |||||||| ||| |||||||||||||||||| || ||||| |||||||||||||| |
Sbjct 624 TATCAACAGCTTTGAAAGAGAGCAAGCCTGTGTATATAAGCATAAGCTGTAACTTAGCAG 683
Query 651 CCATTCCTCATCCTACATTT-GCTAGTTATCCTGTCCCTTTTGAC-CTAACTCCAAGGTT 708
| |||||||||| ||||||| || || ||| ||||||||| | ||| | || || ||
Sbjct 684 CGATTCCTCATCATACATTTAGC-CGTGCTCCAGTCCCTTTT-TCTCTAGCGCCTAGATT 741
Query 709 GAGCAACAAGGAT-TGTTTAGAAGCTGCCGTGGAAGCAACATTGGAGTTTCTAAACAAGG 767
||||||||| ||| || |||||||||| ||||||||||| ||||||||||| || ||||
Sbjct 742 GAGCAACAA-GATGGGTCTAGAAGCTGCGGTGGAAGCAACTTTGGAGTTTCTGAATAAGG 800
Query 768 CCGTGAAGCCCGTTATGGTCGGTGGTCCCAAGTTGCGTGTGGCTAAAGCTAGGGATGC-C 826
| |||||||| |||||||| |||||||| ||||||||||||||||||||| | ||| | |
Sbjct 801 CTGTGAAGCCAGTTATGGTTGGTGGTCCTAAGTTGCGTGTGGCTAAAGCTTGTGAT-CTC 859
Query 827 TTTGTGGAGCTAGCTGATGCTTCAGGCTACCCCGTGGCAGTGATGCCATCTGCCAAAGGC 886
||||| ||||||||||||||||| ||||| | | | | |||||| ||||| ||||||
Sbjct 860 TTTGTTGAGCTAGCTGATGCTTCTGGCTATGCTAAGCCGGCGATGCCTTCTGCGAAAGGC 919
Query 887 TTTGTCCCAGAGAACCATCCTCATTTCATTGGCACTTACTGGGGAGCAGTGAGCACT-CT 945
|||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 920 CTTGTACCAGAGCACCATCCTCATTTCATTGGCACTTATTGGGGAGCAGTGAGCACTCCT 979
Query 946 TTTCTGCTCTGAGATTGTCGAGTCCGCGGATGCTTACATCTTCGCAGGTCCAATCTTCAA 1005
||| |||||||||||||| || || |||||||||||||| || |||||||||||||||||
Sbjct 980 TTT-TGCTCTGAGATTGTGGAATCTGCGGATGCTTACATTTTTGCAGGTCCAATCTTCAA 1038
Query 1006 CGACTACAGCTCCGTTGGTTACTCACTTCTCCTCAAGAAAGAAAAAGCCATCATTGTGCA 1065
|||||| ||||| || |||||||| ||||||||||||||||||||||||||| | |||||
Sbjct 1039 CGACTATAGCTCTGTGGGTTACTCGCTTCTCCTCAAGAAAGAAAAAGCCATCGTCGTGCA 1098
Query 1066 TCCTGATAGTGTCGTTGTGGCTAATGGTCCTACCTTTGGTTGCGTTCGGATGAGCGAATT 1125
||||||| ||||| ||||||||||||||| || ||||| || |||| ||||||||| ||
Sbjct 1099 TCCTGATCGTGTCACTGTGGCTAATGGTCCAACGTTTGGATGGGTTCAGATGAGCGATTT 1158
Query 1126 CTTCAGGGAGTTGGCTAAGAGGGTGAAACCTAACAAGACGGCTTATGAGAACTACCATAG 1185
||||||||| ||||||||||||||||| | ||| |||| ||||||||||||||||||||
Sbjct 1159 CTTCAGGGAATTGGCTAAGAGGGTGAAGCGTAATGAGACTGCTTATGAGAACTACCATAG 1218
Query 1186 AATCTTTGTCCCTGAAGGTAAGCCTTTGAAATGCAAACCAAGAGAGCCTTTGAGAATCAA 1245
|||||||| |||||||||||||| ||||| ||| || ||| |||||| || ||| | ||
Sbjct 1219 GATCTTTGTTCCTGAAGGTAAGCCATTGAAGTGCGAATCAAAAGAGCCATTAAGAGTTAA 1278
Query 1246 CGCAATGTTCCAACACATTCAGAAGATGCTCTCTAATGAAACCGCTGTGATTGCTGAAAC 1305
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1279 TACAATGTTCCAACACATTCAGAAGATGCTCTCTAGTGAAACCGCTGTGATTGCTGAAAC 1338
Query 1306 TGGTGATTCTTGGTTCAATTGTCAGAAACTTAAGCTGCCTAA-AGGATGTGGGTACGAGT 1364
|||||||||||||||||||| |||||||| ||| |||| || ||| ||||| |||||||
Sbjct 1339 CGGTGATTCTTGGTTCAATTGCCAGAAACTAAAGTTGCC-AAGAGGCTGTGGATACGAGT 1397
Query 1365 TTCAAATGCAGTATGGATCAATTGGTTGGTCTGTTGGTGCGACTCTAGGATACGCTCAAG 1424
|||| |||||||||||||| ||||| |||||||||||||| |||||||||||||| || |
Sbjct 1398 TTCAGATGCAGTATGGATCGATTGGGTGGTCTGTTGGTGCAACTCTAGGATACGCACAGG 1457
Query 1425 CAACACCGGAGAAGAGAGTGTTGTCTTTCATTGGAGACGGAAGTTTCCAAGTGACGGCTC 1484
|| |||| |||||| |||||||| | ||||| || ||||| |||||||||||||||||||
Sbjct 1458 CATCACCAGAGAAGCGAGTGTTGGCATTCATCGGTGACGGGAGTTTCCAAGTGACGGCTC 1517
Query 1485 AGGACGTTTCCACAATGATTCGTAA-CGGACAGAAGACCATCATCTTCCTGATCAACAAC 1543
||||| | || |||||| | ||||| | |||||||||| ||||||||| |||| |||||
Sbjct 1518 AGGACATATCAACAATGCTGCGTAATC-GACAGAAGACGATCATCTTCTTGATTAACAAT 1576
Query 1544 GGTGGCTACACCATTGAAGTTGAGATTCATGATGGTCCTTACAATGTGATCAAGAATTGG 1603
|||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| |||
Sbjct 1577 GGTGGCTACACCATTGAAGTAGAGATTCATGATGGTCCTTATAACGTGATTAAGAACTGG 1636
Query 1604 AACTACACTGGTCTTGTCGATGCTATTCATAATGGTGAAGGCAAATGCTGGACCACAAAG 1663
|||||||||||||| || || || |||||||| ||||||||||| |||||||| ||||||
Sbjct 1637 AACTACACTGGTCTCGTTGACGCCATTCATAACGGTGAAGGCAATTGCTGGACTACAAAG 1696
Query 1664 GTGAGATACGAGGAGGAGTTAGTGGAAGCGATTAACACGGCGACATTGGAGAAGAAAGAT 1723
|||||||||||||||||||||||||| ||||| || || || ||| ||||||||||||||
Sbjct 1697 GTGAGATACGAGGAGGAGTTAGTGGAGGCGATCAAGACAGCAACAATGGAGAAGAAAGAT 1756
Query 1724 AGTCTTTGTTTCATTGAAGTGATTGTTCACAAGGATGATACGAGCAAAGAGTTGCTTGAG 1783
|||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 1757 TGTCTATGTTTCATAGAAGTGATTCTTCATAAGGATGATACGAGCAAAGAGTTGCTTGAG 1816
Query 1784 TGGGGCTCTCGCGTCTCAGCTGCTAATGGTCGTCCTCCCAATCCTCAGTAGAAGCAAG 1841
|||||||| ||||| || ||||||||| | |||||||||||||||||||||||| |||
Sbjct 1817 TGGGGCTCACGCGTATCTGCTGCTAATAGCCGTCCTCCCAATCCTCAGTAGAAG-AAG 1873
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77208926615
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5