BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G01540.1
Length=2494
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486921 jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1 3162 0.0
Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1 1171 0.0
> Ahg486921 jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1
Length=2283
Score = 3162 bits (1712), Expect = 0.0
Identities = 2028/2180 (93%), Gaps = 23/2180 (1%)
Strand=Plus/Plus
Query 140 ATGGGCAC-ACAAAGATCCA-TGTTCATAGTCTCATTCTTATTCAAGCTTTTCCTGTTTT 197
|||||||| | |||||||| || || || ||||| |||||||||| |||||||||||||
Sbjct 95 ATGGGCACTGC-AAGATCCATTG-TCTTACTCTCACTCTTATTCAATCTTTTCCTGTTTT 152
Query 198 TGAGCGTCCATGTTCGAGCTCAGAGAACAACAACAAATTTTGCTTTCCGAGGTTTTAACG 257
|||||||||||||| | |||||||||||||||||| ||||| |||||||||||||| |
Sbjct 153 TGAGCGTCCATGTTGGGGCTCAGAGAACAACAACAGATTTTACTTTCCGAGGTTTTCTTG 212
Query 258 GAAACCAATCGAAGATTCGGATTGAAGGAGCCGCGATGATCAAACCCGACGGACTATTGA 317
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 213 GAAACCAATCAAAGATTCGGATTGAAGGAGCCGCGATGATCAAACCCGAGGGACTATTGA 272
Query 318 GACTCACTGACCGAAAGTCGAATGTTACCGGTACAGCTTTCTACCACAAACCGGTGAGGT 377
| |||||||| || ||||| || ||||||||||| ||||||||||||||||||||||| |
Sbjct 273 GGCTCACTGATCGGAAGTCAAACGTTACCGGTACGGCTTTCTACCACAAACCGGTGAGAT 332
Query 378 TGCT------TAATAGAAATTCCACAAACGTCACAATTCGTTCCTTTAGCACGTCTTTCG 431
|||| || |||||||||||||||||||| | |||||||||||||||| ||||||
Sbjct 333 TGCTGGAGACTAGTAGAAATTCCACAAACGTCAGAGTTCGTTCCTTTAGCACTTCTTTCA 392
Query 432 TCTTTGTCATAATCCCTTCAAGCTCAAGCAATAAAGGCTTTGGATTCACATTCACACTAT 491
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 393 TCTTTGTCATAATCCCTTCAAGCTCAAGCAATAAAGGTTTTGGATTCACATTCACACTAT 452
Query 492 CTCCAACACCTTATCGTCTCAATGCTGGATCCGCACAGTACTTGGGAGTTTTCAACAAAG 551
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 CTCCAACCCCTTATCGTCTCAATGCTGGATCCGCACAGTACTTGGGAGTTTTCAACAAAG 512
Query 552 AGAACAATGGGGATCCTAGGAACCACGTATTCGCAGTGGAATTCGACACGGTGCAAGGAT 611
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 513 AGAACAATGGGGATCCTAGGAATCACGTTTTCGCAGTGGAATTCGACACGGTGCAAGGAT 572
Query 612 CAAGAGACGACAACACCGACAGAATAGGAAACGACATCGGTCTGAATTACAACAGTCGTA 671
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 CCAGAGACGACAACACCGACAGAATAGGAAACGACATCGGTCTGAATTACAACAGTCGTA 632
Query 672 CTTCGGATCTCCAAGAACCAGTCGTGTATTACAACAATGATGATCAC-AACAAAAAAGAA 730
|||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 633 CTTCGGATCTACAAGAACCAGTCGTGTATTACAACAATGATGATC-CTAACAAAAAAGAA 691
Query 731 GATTTCCAGCTTGAGAGTGGCAATCCTATTCAAGCCCTTTTGGAGTATGATGGAGCAACA 790
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 692 GATTTCCAGCTTGAGAGTGGCAATCCGATTCAAGCCCTTTTGGAGTATGATGGACCAACA 751
Query 791 CAAATGCTAAACGTCACCGTTTATCCCGCGAGATTAGGGTTTAAACCCACAAAGCCTTTG 850
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 752 CAAATGCTAAACGTCACCGTTTATCCGGCGAGATTGGGGTTTAAACCCACAAAGCCTTTG 811
Query 851 ATCTCTCAACATGTTCCAAAACTGTTGGAGATTGTGCAAGAAGAAATGTACGTCGGATTC 910
|||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||
Sbjct 812 ATCTCTCAACATGTTCCAAAACTGTTAGAGATTGTGCAACAAGAAATGTATGTCGGATTC 871
Query 911 ACGGCATCGACGGGGAAAGGTCAGTCAAGTGCTCATTACGTGATGGGTTGGAGTTTCTCA 970
|| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 872 ACTGCGTCGACGGGGAAAGGTCAGTCGAGTGCTCATTACGTAATGGGTTGGAGTTTCTCA 931
Query 971 AGCGGCGGAGAACGTCCAATTGCGGATGTTCTA-ATCCTCTCGGAGCTTCCTCCGCCGCC 1029
||||||||||||||||||||||| || || || ||| |||||||||||||||| |||||
Sbjct 932 AGCGGCGGAGAACGTCCAATTGCAGACGTCCTCGATC-TCTCGGAGCTTCCTCCTCCGCC 990
Query 1030 GCCGAATAAGGCGAAGAAGGAAGGTTTAAATTCTCAAGTCATTGTTATGATCGTGGCGTT 1089
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct 991 GCCGAATAAGGCGAAGAAAGAAGGTTTAAATTCTCAAGTCATTGTTATGATCGTGTCTTT 1050
Query 1090 ATCGGCAGTAATGCTGGTCATGCTTGTGTTACTCTTCTTCTTCGTCATGTACAAGAAGAG 1149
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1051 ATCGGCCGTAATGCTGGTCATGCTTGTGTTGCTCTTCTTCTTCGTCATGTACAAAAAGAG 1110
Query 1150 ACTGGGACAAGAAGAGACTCTTGAAGACTGGGAAATCGATCATCCTCGCAGATTGAGATA 1209
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATTGGGACAAGAAGAGACTCTTGAAGACTGGGAAATCGATCATCCTCGCAGATTGAGATA 1170
Query 1210 CAGAGACCTCTACGTAGCCACGGATGGATTCAAAAAGACTGGAATCATCGGAACCGGAGG 1269
|||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct 1171 CAGAGATCTCTACGTAGCCACGGATGGATTCAAGAAGACGGGGATCATCGGAACCGGAGG 1230
Query 1270 ATTTGGAACCGTTTTCAAAGGAAAACTGCCGAATTCGGATCCCATCGCAGTGAAGAAGAT 1329
||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct 1231 ATTTGGAACCGTTTTCAAAGGAAAACTCCCAAATTCGGATCCCATCGCTGTGAAGAAGAT 1290
Query 1330 AATTCCAAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGAA 1389
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 AATTCCCAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGAA 1350
Query 1390 ACTAAGGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCTT 1449
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1351 ATTAAGGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCTT 1410
Query 1450 GTTGATTTACGATTACATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACTGTACCGAG 1509
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 GTTGATTTACGATTATATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACTGTACCGAG 1470
Query 1510 AAGAAGCGGCGCCGTTTTGTCGTGGAACGCTCGTTTTCAGATCGCTAAAGGAATCGCGTC 1569
||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||
Sbjct 1471 AAGAAGCGGCGCCGTGTTGTCGTGGAACGCGCGTTTCCAGATCGCTGAAGGAATCGCGTC 1530
Query 1570 TGGTTTATTGTATCTTCACGAAGAATGGGAGAAGATTGTGATTCATAGAGACGTGAAACC 1629
|||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1531 TGGTTTGTTGTATCTTCACGAAGAATGGGAAAAGATTGTGATTCACAGAGACGTGAAACC 1590
Query 1630 TAGCAATGTCTTGATCGATTCAAAGATGAACCCTAGATTGGGAGATTTTGGACTCGCGAG 1689
|||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1591 TAGCAACGTTTTGATTGATTCCAAGATGAACCCTAGATTGGGAGATTTTGGACTCGCGAG 1650
Query 1690 GCTTTACGAACGCGGAACGCTATCGGAAACAACAGCACTCGTTGGAACCATCGGGTACAT 1749
||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||
Sbjct 1651 GCTTTACGAACGCGGAACGCTATCGCAGACAACAGCACTCGTTGGAACCATTGGGTACAT 1710
Query 1750 GGCGCCAGAGCTTTCCCGCAACGGAAACCCCTCATCTGCGTCTGATGTTTTCGCGTTTGG 1809
|||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1711 GGCGCCAGAGCTCTCCCGAAACGGCAACCCCTCATCTGCGTCTGATGTTTTCGCGTTTGG 1770
Query 1810 CGTTTTGTTGTTAGAGATCGTTTGCGGGAGAAAACCAACGGATTCCGGTACCTTCTTCTT 1869
||||||| ||||||| ||||| | |||||||||||| ||||||||| ||| |||||||||
Sbjct 1771 CGTTTTGCTGTTAGAAATCGTCTCCGGGAGAAAACCGACGGATTCCTGTAGCTTCTTCTT 1830
Query 1870 GGTCGATTGGGTTATGGAGCTTCACGCGAACGGTGAGATTCTCAGTGCGATTGATCCGAG 1929
|||||||||||||||||||| || |||| ||||||||| ||||| ||||| ||||||||
Sbjct 1831 AGTCGATTGGGTTATGGAGCTACAAGCGAGCGGTGAGATCCTCAGCGCGATCGATCCGAG 1890
Query 1930 ACTAGGATCTGGTTACGACGGAGGAGAAGCAAGGCTTGCTCTCGCCGTCGGATTGCTCTG 1989
||| |||||||||||||||| |||||| |||||||||||||| ||||| || ||||||||
Sbjct 1891 ACTCGGATCTGGTTACGACGAAGGAGAGGCAAGGCTTGCTCTTGCCGTGGGTTTGCTCTG 1950
Query 1990 TTGCCACCAAAAACCGGCGTCTCGGCCGTCGATGAGAATCGTGCTTAGGTATCTAAACGG 2049
|||||||||||||||| ||||||||||| |||||||||| ||||| ||||| || ||| |
Sbjct 1951 TTGCCACCAAAAACCGACGTCTCGGCCGCCGATGAGAATGGTGCTCAGGTACCTGAACAG 2010
Query 2050 AGAGGAGAATGTACCTGAGATTGACGATGAGTGGGGATATTCAAAGTCTTCAAGAAGCGA 2109
||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2011 AGACGAGGATGTTCCTGAGATTGACGATGAGTGGGGATATTCAAAGTCTTCAAGAAGCAA 2070
Query 2110 ATTCGGATCCAAGTTGGTAGGATATGTTTCGTCGACCTCAATCACCAGAGTTTCTTCGAC 2169
|||||||||||| || |||||||||| ||| | || ||||||| ||||||||||||||||
Sbjct 2071 ATTCGGATCCAATTTTGTAGGATATGATTCATTGAGCTCAATCGCCAGAGTTTCTTCGAC 2130
Query 2170 TTCTCGTATCAGTCAGTAGTGGATAAAGCACATTCACTTTTTTGCTTCGAATTAGTCAAA 2229
|||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||
Sbjct 2131 TTCTCGTATCAGTCAGTAGTGGATAATGCATGTTCACTTTCTTGCTTCGAATTGGTCAAA 2190
Query 2230 TCGTTTAGCTT-CAAAAGACCAAAACATGATTTAACTAGTACTTATGATTAATGAACAAT 2288
|| |||||||| |||||||||||||||| | ||||||| | | | ||| | || |||||
Sbjct 2191 TCTTTTAGCTTTCAAAAGACCAAAACATAAGTTAACTA-T--T-A-GAT-A-TGGACAAT 2243
Query 2289 AGTATAAAATAAATTTGTTG 2308
|||||||||||||||| |||
Sbjct 2244 AGTATAAAATAAATTT-TTG 2262
> Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1
Length=2299
Score = 1171 bits (634), Expect = 0.0
Identities = 1344/1675 (80%), Gaps = 95/1675 (6%)
Strand=Plus/Plus
Query 241 TTTCCGA-GGTTTTAACGGAAACCAAT-CGAAGATTCGGATTG-AAGGAGCCGCGATGAT 297
||||| | ||||| || |||||||||| |||| |||| || || |||||| | | ||
Sbjct 349 TTTCC-ATGGTTTCAAAGGAAACCAATCCGAA-ATTCAGA-TGCAAGGAGATTCAACCAT 405
Query 298 CAAACCCGACGGACTATTGAGACTCACTGACCGAAAGTCGAATGTTACCGGTACAGCTTT 357
|| | || |||||||||| || ||||| || ||||| ||| | ||| ||||||||||||
Sbjct 406 CACATCCAACGGACTATTAAGGCTCACAGATCGAAACTCGGACGTTGTCGGTACAGCTTT 465
Query 358 CTACCACAAACCGGTGAGGTTGCTTAATAGAAATTCCA-CAA-ACGTCACAATTCGTTCC 415
|||||| ||||||||||| ||||| | || || |||| ||| ||| || ||||||||
Sbjct 466 CTACCATAAACCGGTGAGATTGCTCGACAGTAACTCCACCAATACG--ACGGTTCGTTCC 523
Query 416 TTTAGCACGTCTTTCGTCTTTGTCATAATCCCTTCAAGCT---CAAGCAATAAAGGCTTT 472
|||||||| ||||||||| | || ||||||||||||||| ||||||| ||| |||
Sbjct 524 TTTAGCACTTCTTTCGTC--T-TCGTAATCCCTTCAAGCTCAACAAGCAACGGAGGTTTT 580
Query 473 GGATTCACATTCACACTATCTCCAACACCTTATCGTCTCA-ATGCTGGAT-CCGCA-CAG 529
|| |||||||||||||| |||||||| || | ||| || | || ||| ||| | |||
Sbjct 581 GGCTTCACATTCACACTCTCTCCAACCCCAAACCGT-ACAGACGC-AGATCCCG-AGCAG 637
Query 530 TACTTGGGAG-TTTTCAAC-AAAGAGAACAATGGGGATCCTAGGAACCACGTATTCGCAG 587
| |||||| | || ||||| ||||| ||| | ||| || | || || ||||| || || |
Sbjct 638 TTCTTGGG-GCTTCTCAACGAAAGA-AACGACGGGAATTCAAGCAATCACGTTTTTGCTG 695
Query 588 TGGAATTCGACACGGTGCAAGGA-TCAAGAGAC-G-ACAACACCGACAGAATAGGAAACG 644
|||||||||||||||| |||||| |||| |||| | |||| | | ||||||| |||
Sbjct 696 TGGAATTCGACACGGTACAAGGATTCAA-AGACGGTACAA-A---TC-GAATAGGCAACC 749
Query 645 ACATCGGTCTGAATTACAACAGTCGT-ACTTCGGATCTCCAAGAACCAGTCG-TGTATTA 702
|||||||||| |||| |||||||| | |||| ||| |||||||||| || | | |||||
Sbjct 750 ACATCGGTCTAAATTTCAACAGTC-TCTCTTCAGATGTCCAAGAACCGGTGGCT-TATTA 807
Query 703 CAACAATGATGATCACAACAAAAAAGAAGATTTCCAGCTTGAGAGTGGCAATCCTATTCA 762
|||||| | ||| | | | ||||| || ||||| || | ||| ||| | || || ||
Sbjct 808 CAACAACAACGAT-A-GTC-AGAAAGAGGAATTCCAACTGGTGAGCGGCGAGCCAATCCA 864
Query 763 AGCCCTT-TTGGAGTATGATGGAGCAACACAAATGCTAAACGTCACCGTTTATCCC-GCG 820
|| ||| ||||| ||| | ||| |||| |||||||| ||| |||| ||||| ||| |
Sbjct 865 AG-TCTTCTTGGATTATCACGGACCAACCCAAATGCTTAACCTCACTGTTTA-CCCAACC 922
Query 821 AGATTAGGG-TTTAAACCCACAAAGCCTTTGATCTCTCAACATGTTCCAAAACTGTTGGA 879
||| | ||| | |||||| | || || |||||||| | | | ||||||||||||| ||
Sbjct 923 AGACT-GGGATATAAACCAAGAATCCCCTTGATCTCACGAGAGGTTCCAAAACTGTCAGA 981
Query 880 GATTGTGCAAGAAGAAATGTACGTCGGATTCACGGCATCGAC-GGG-GA-AAGGTCAGTC 936
|||||| ||| ||||||| |||||||||||| ||| |||| ||| || | || || ||
Sbjct 982 TATTGTGGTAGATGAAATGTTCGTCGGATTCACAGCAGCGACTGGGAGACACGGACAATC 1041
Query 937 AAGTGCTCATTACGTGATGGGTTGGAGTTTCTCAAGCGGCGGAGAACGTCCAATTGC-G- 994
||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||| |
Sbjct 1042 GAGTGCTCATTATGTGATGGGTTGGAGTTTCGCAAGCGGCGGAGAACATCCACTTGCAGC 1101
Query 995 GATGTTCTAATCCTCTCGGAGCTTCCTCCGCCGCCGCCGAATAAGGCGAAGAAGGA-AGG 1053
||| || | |||||| | |||||||| ||||| || ||||||| |||||| || |||
Sbjct 1102 TATGCTC-GA-CCTCTCCCAACTTCCTCCTCCGCCTCCAAATAAGGAGAAGAA-GAGAGG 1158
Query 1054 TTTA-AATTCTCAA-GTCATTGTTATGATCGTGGCGTTATCGGCAG-TA-ATGCTGGTCA 1109
|| ||| | || ||||| | | |||||||||| |||||| | | || || | | |||
Sbjct 1159 -CTACAATGGT-AAGGTCATCGCTCTGATCGTGGCTTTATCGACTGTTATAT-C-GATCA 1214
Query 1110 TGCTT-GTGTTACT-CTTCTTCTTCGTCATGTACAAGAAGAGACTGGGA-CAAGAAGAGA 1166
|| || ||||| | ||| ||||| | |||||||| ||| || | | | ||||||||||
Sbjct 1215 TG-TTGGTGTTGTTGTTTC-TCTTCATGATGTACAAAAAGCGAAT-GCAGCAAGAAGAGA 1271
Query 1167 CTCTTGAAGACTGGGAAATCGATCATCCTCGCAGATTGAGATACAGAGACCTCTACG-TA 1225
||| ||||| ||||||||||||||||||| |||||| |||||||||||||||| | |
Sbjct 1272 TTCTAGAAGATTGGGAAATCGATCATCCTCACAGATTTCGATACAGAGACCTCTATGCT- 1330
Query 1226 GCCACGGATGGATTCAAAAAGACT-GGAATCATCGGAACCGGAGGATTTGGAACCGTTTT 1284
|| || ||||||||||| ||| | || || |||||||||||||||| ||| ||||
Sbjct 1331 GCTACTGATGGATTCAAGGAGAATCGG-ATTGTCGGAACCGGAGGATTCGGAGTTGTTTA 1389
Query 1285 CAAAGGAAA-A-CTGC--CGA--AT--TCGGATCCCATCGCAGTGAAGAAGATAATTCC- 1335
|| |||||| | || | | | | || || | ||||||||||||||||||| |||
Sbjct 1390 CAGAGGAAACATCT-CATC-ATCTTCCTCTGAACAAATCGCAGTGAAGAAGATAACTCCG 1447
Query 1336 AAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGA-AACTAA 1394
|| ||||| |||||||||||||||||| ||||||||||| |||||||| |||| | |||
Sbjct 1448 AA-TAGCATGCAAGGTGTTCGAGAATTCGTCGCAGAGATAGAGAGTTT-GGGACGATTAA 1505
Query 1395 GGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCTTGTTGA 1454
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1506 GGCATAAGAATCTGGTGAACCTCCAAGGATGGTGTAAACACAGAAACGATCTCTTGTTGA 1565
Query 1455 TTTACGATTACATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACTGTACCGAGAAGAA 1514
|||||||||| || |||||||||||||||||||| |||||||||| | |||||||||||
Sbjct 1566 TTTACGATTATATACCCAACGGAAGCTTAGACTCGCTGCTCTACAGTAAACCGAGAAGAA 1625
Query 1515 GCGGCGCCGTTTTGTCGTGGAACGCTCGTTTTCAGATCGCTAAAGGAATCGCGTCTGGTT 1574
||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||||
Sbjct 1626 GCGGCGCGGTTTTGTCGTGGAACGCGCGTTTTCAGATCGCCAGAGGAATCGCGTCTGGTT 1685
Query 1575 TATTGTATCTTCACGAAGAATGGGAGAAGATTGTGATTCATAGAGACGTGAAACCTAGCA 1634
| |||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1686 TGTTGTATCTACACGAGGAATGGGAAAAGATTGTGATTCACAGAGACGTGAAACCTAGCA 1745
Query 1635 ATGTCTTGATCGATTCAAAGAT--GAACCCTAGATTGGGAGATTTTGGACTCGCGAGGCT 1692
| || ||||| || | | ||| ||||||||||||||||||||| || || ||||||||
Sbjct 1746 ACGTTTTGATTGA--CGACGATATGAACCCTAGATTGGGAGATTTCGGGCTAGCGAGGCT 1803
Query 1693 TTACGAACGCGGAACGCTATCG-GAAACAACAGCACTCGTTGGAACCATCGGGTACATGG 1751
||||||||||||| | | |||| ||| || | | | |||| || || || ||||| ||||
Sbjct 1804 TTACGAACGCGGATCTCAATCGCGAACCACC-GTAGTCGTCGGCACGATTGGGTATATGG 1862
Query 1752 CGCCAGAGCTTTCCCGCAACGGAAACCCCTCATCTGCGTCTGATGTTTTCGCGTTTGGCG 1811
|||| ||||| |||||||||||||| ||||||| || || || ||||||||||||||||
Sbjct 1863 CGCCGGAGCTAGCCCGCAACGGAAACTCCTCATCAGCTTCCGACGTTTTCGCGTTTGGCG 1922
Query 1812 TTTTGTTGTTAGAGATCGTTTGCGGGAGAAAACCAACGGATTCCGGTACCTTCTT 1866
||||| ||||||| ||||| | |||||||||||| ||||| || || ||||||||
Sbjct 1923 TTTTGCTGTTAGAAATCGTCTCCGGGAGAAAACCGACGGACTCTGGGACCTTCTT 1977
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94006724660
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5