BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G01550.1
Length=2067
Score E
Sequences producing significant alignments: (Bits) Value
Ahg892054 jgi|Araly1|892054|Al_scaffold_0006_50 3064 0.0
Ahg486921 jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1 1559 0.0
Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1 1258 0.0
Ahg478190 jgi|Araly1|478190|fgenesh2_kg.3__891__AT3G08870.1 819 0.0
> Ahg892054 jgi|Araly1|892054|Al_scaffold_0006_50
Length=2070
Score = 3064 bits (1659), Expect = 0.0
Identities = 1932/2067 (93%), Gaps = 6/2067 (0%)
Strand=Plus/Plus
Query 4 CTCGTGCTCTTCTTGCTTTTGACCATCCCTACTCGAGCTCAAAGAACAACAACGGAGACT 63
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 7 CTCGTGCTCTTCTTGCTTTTGACCATCCCTACTCGAGCTCAAGGAACAACAACGGAGACT 66
Query 64 CCAAAAACAGAGTTTATTTTCCGAGGTTTTAGCGGAAACCAATCAAATATTGTGACAACG 123
|||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 67 CCAATAACAGAGTTTATTTTCCGAGGTTTTAGTGGAAACCAATCGAATATTGTGACTACG 126
Query 124 GGAGCTGCGACGATCAAACTCGACGGACTATTGAGGCTCACTGACCGAAACTCAAACGTT 183
||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||
Sbjct 127 GGAACTGCGACGATCAAACCCGACGGCCTATTGAGGCTCACTGACCGAAACCCAAACGTT 186
Query 184 ACCGGTACATCTTTCTACCACAAACCTGTGAGATTGCTGGAGACTAATACAAGTTCCACA 243
|||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct 187 ACCGGTACATCTTTCTACCACAAAGCGGTGAGATTGCTGGAGACCAATACAAGTTCCACA 246
Query 244 AACTCCACAATCCGTTCTTTTAGCACTTCCTTCGTATTTGTCATCATCCCTACAAGCTCT 303
||| | || | ||||||||||||||||| || ||||||||||| |||||| |||||||
Sbjct 247 AACGCTACGGTTCGTTCTTTTAGCACTTCTTTTGTATTTGTCATAATCCCTGCAAGCTCC 306
Query 304 AGCAACGGAGGTTTTGGCTTCACCTTCACGCTATCTCCAACCCCTGATCGTACCGGAGCC 363
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 307 AGCAACGGAGGTTTTGGCTTCACCTTCACACTCTCTCCAACCCCTGATCGTACCGGAGCC 366
Query 364 GAATCCGCACAGTACTTGGGACTTCTCAACAAAGCAAACGACGGGAATTCGACGAATCAC 423
||||| |||||||| || |||||||||||||||| ||||||||||||| |||||||||
Sbjct 367 GAATCTGCACAGTATTTAGGACTTCTCAACAAAGGGAACGACGGGAATTTGACGAATCAT 426
Query 424 GTTTTTGCTGTGGAATTCGACACAGTGCAAGGTTTTAAAGACGGTGCCGATAGAACAGGC 483
||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 427 GTTTTCGCGGTGGAATTCGACACGGTGCAAGGTTTCAAAGACGGTGCCGATAGAACAGGC 486
Query 484 AATCACATCGGTCTGAATTTCAACAGTTTAACATCTGATGTCCAAGAACCGGTCGTGTAT 543
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 487 AATCACATCGGTCTAAATTTCAACAGTTTAACATCTGATGTTCAAGAACCGGTCGTGTAT 546
Query 544 TACGACAACGAAGATCCTAACCGGAAAGAGGATTTCCCACTACAGAGTGGCGATCCAATC 603
|||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||
Sbjct 547 TACGACAACGAAGATCCTGACCGGAAAGAGGATTTCCCACTACAGAGCGGCGATCCGATC 606
Query 604 CGAGCAATTTTGGATTACGATGGGCCAACTCAAACGCTAAACTTAACTGTCTACCCGGCT 663
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 607 CGAGCAATTTTAGATTACGATGGGCCAACTAAAACGCTAAACTTAACTGTCTACCCGGCT 666
Query 664 AACTTGAAGTCTAGACCCGTAAGGCCTTTGATCTCGCGACCTGTTCC-AAAGTTGTCGCA 722
||||||||||||||||||||||||||||||||||| ||||| ||||| ||| || |||||
Sbjct 667 AACTTGAAGTCTAGACCCGTAAGGCCTTTGATCTCCCGACCGGTTCCGAAA-TTATCGCA 725
Query 723 AATCGTGCAAGAAGAAATGTATGTTGGATTCACAGCAGCTACAGGGAGAGATCAGTCGAG 782
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 726 GATCGTGCAAGAAGAAATGTATGTCGGATTCACAGCAGCTACAGGGAGAGATCAGTCGAG 785
Query 783 TGCTCACTACGTCATGGGCTGGAGTTTTTCTAGCGGCGGTGATCTTCTAACTGAAGATAC 842
||||| ||| |||||||||||||||||||||||||||| |||||||| |||| ||| ||
Sbjct 786 CGCTCATTACATCATGGGCTGGAGTTTTTCTAGCGGCGGCGATCTTCTGACTGCAGACAC 845
Query 843 GCTTGACCTCTTGGAACTTCCTCGTCCGCCTCCGAACACGGCGAAGAAGAGAGGTTACAA 902
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 846 TCTTGACCTGTTGGAACTTCCTCGTCCCCCTCCGAATACGGCGAAGAAGAGAGGTTACAA 905
Query 903 TTCTCAAGTACTCGCTCTGATCGTAGCTCTATCGGGAGTAACAGTGATCTTGCTTGCGTT 962
|||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct 906 TTCTCAAGTACTCGCTCTGATCGTAGCTCTATCGGGCGTAACCTTGGTCTTGCTTGCGTT 965
Query 963 ACTCTTCTTTTTCGTGATGTACAAGAAACGATTGCAACAAGGAGAGGTTCTTGAAGACTG 1022
||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 966 ACTCTTCTTCTTCGTGATGTATAAGAAACGATTGCAACAAGGAGAGATTCTTGAAGACTG 1025
Query 1023 GGAAATCAATCATCCTCATAGACTTAGATATAAAGATCTCTACGCTGCTACGGATGGATT 1082
|||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1026 GGAAATCAATCATCCTCACAGACTCAGATATAAAGATCTCTACGCTGCTACTGATGGATT 1085
Query 1083 -CAAGGAGAATAGGATTGTCGGAACTGGAGGATTTGGAACCGTTTTCCGAGGAAACTTAT 1141
|| ||||||||||||| |||| ||||||||||| ||||||||||||||||||||| | |
Sbjct 1086 TCA-GGAGAATAGGATTATCGGTACTGGAGGATTCGGAACCGTTTTCCGAGGAAACATCT 1144
Query 1142 CGTCACCTTCGTCTGATCAAATCGCCGTGAAGAAGATAACTCCGAATAGTATGCAAGGTG 1201
|||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1145 CGTCTCCTTTGTCTGATCAAATCGCCGTGAAGAAGATAACTCCCAATAGTATGCAAGGTG 1204
Query 1202 TTCGAGAATTCATCGCAGAGATCGAGAGTTTGGGGA-GATTAAGGCATAAGAATCTGGTC 1260
|||||||||| || |||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct 1205 TTCGAGAATTTATAGCAGAGATTGAGAGTTTGGG-ACGATTAAGGCATAAGAATCTGGTC 1263
Query 1261 AACCTTCAAGGATGGTGCAAGCaaaaaaaCGATCTCTTGTTAATTTATGATTATATCCCT 1320
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1264 AACCTTCAAGGATGGTGCAAGCAAAAAAACGACCTCTTGTTAATTTATGACTATATCCCT 1323
Query 1321 AACGGAAGCTTAGACTCGCTGCTCTACAGTAGACCAAGACAGAGCGGTGTTGTTTTGTCG 1380
|| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||
Sbjct 1324 AATGGAAGCTTAGACTCGCTGCTTTACAGTAGACCAAGACAGAGCGGCGCCGTTTTGTCG 1383
Query 1381 TGGAACGCACGTTTTAAGATTGCTAAAGGAATCGCGTCTGGTTTGTTGTATCTCCATGAA 1440
||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 1384 TGGAACGCACGTTTTCAGATCGCTAAAGGAATCGTGTCTGGTTTGTTGTATCTCCATGAA 1443
Query 1441 GAATGGGAAAAGGTTGTGATTCACAGAGACATAAAACCTAGCAACGTTTTGATTGAGGAC 1500
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444 GAATGGGAAAAGATTGTGATTCACAGAGACATAAAACCTAGCAACGTTTTGATTGAGGAA 1503
Query 1501 GATATGAATCCTAGGTTGGGAGATTTTGGACTCGCGAGGCTTTACGAACGCGGATCGCAA 1560
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1504 GATATGAATCCTAGGTTGGGAGATTTTGGACTCGCAAGGCTTTACGAACGCGGATCGCAA 1563
Query 1561 TCGAACACGACCGTAGTCGTGGGCACAATTGGGTACATGGCACCAGAGCTAGCACGCAAC 1620
|| || |||||||||||||||||||| ||||| || ||||| |||||||| || ||||||
Sbjct 1564 TCAAAAACGACCGTAGTCGTGGGCACGATTGGCTATATGGCGCCAGAGCTGGCCCGCAAC 1623
Query 1621 GGCAAATCTTCGTCTGCGTCTGATGTTTTTGCGTTTGGCGTTTTGTTATTAGAGATAGTC 1680
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1624 GGCAGATCTTCGTCTGCGTCTGATGTTTTTGCGTTTGGCGTTTTGCTATTAGAGATAGTC 1683
Query 1681 TCCGGGAGAAGACCGACTGACTCAGGGACATTCTTCTTGGCCGATTGGGTTATGGAATTG 1740
||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct 1684 TCCGGGAGAAGACCGACGGACTCAGGGACCTTCTTCTTGGCAGACTGGGTTATGGAATTG 1743
Query 1741 CACGCGAGAGGAGAGATTCTCCATGCGGTGGATCCGAGACTTGGATTTGGTTACGACGGC 1800
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||
Sbjct 1744 CACGCGAGAGGAGAGATTCTTCACGCGGTGGATCCGAGACTTGGATTTGGTTACGACAGC 1803
Query 1801 GTTGAGGCACGGCTTGCTCTTGTTGTGGGATTGCTCTGTTGCCATCAAAGACCGACGTCT 1860
|| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1804 GTAGAGGCAAGGCTTGCTCTTGTTGTGGGATTGCTCTGTTGCCATCAAAGACCGACGTCA 1863
Query 1861 CGGCCGTCCATGAGAACGGTGCTTAGGTATTTGAACGGAGATGATGATGTACCTGAAATT 1920
||||||| ||||||| ||||||||||||||||||||| || || ||||| |||||||||
Sbjct 1864 AGGCCGTCGATGAGAATGGTGCTTAGGTATTTGAACGGGGACGAAGATGTTCCTGAAATT 1923
Query 1921 GATAACGATTGGGGATACTCGGATTCTTCAAGAAGCGATTTAGGATCCAACTTTGAAGGA 1980
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1924 GATAACGATTGGGGATACTCAGATTCTTCAAGAAGGGATTTAGGATCCAACTTTGAAGGA 1983
Query 1981 TATGTTTCATCGGATAGGGCTTCGAGCTCAGTCCCATCTTTCTCCGTTACAAGGGTTTCT 2040
||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| | |||
Sbjct 1984 TATGTTTCATCGGATAGGGTTTCGAGCTCAGTCGCATCGTTCTCCGTTACAAGGATGTCT 2043
Query 2041 TCTAGTTCTGTTATCAGTGGTAGATAG 2067
|| || |||||| ||||||||||||||
Sbjct 2044 TCAAGCTCTGTTGTCAGTGGTAGATAG 2070
> Ahg486921 jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1
Length=2283
Score = 1559 bits (844), Expect = 0.0
Identities = 1599/1959 (82%), Gaps = 69/1959 (4%)
Strand=Plus/Plus
Query 65 CAAAAACAGAGTTTATTTTCCGAGGTTTTAGCGGAAACCAATCAAATATT-GTGA--CAA 121
||| |||||| |||| ||||||||||||| |||||||||||||| ||| | || ||
Sbjct 180 CAACAACAGATTTTACTTTCCGAGGTTTTCTTGGAAACCAATCAAAGATTCG-GATTGAA 238
Query 122 CGGGAGCTGCGACGATCAAACTCGACGGACTATTGAGGCTCACTGACCGAAACTCAAACG 181
||||| |||| |||||||| ||| |||||||||||||||||||| || || |||||||
Sbjct 239 --GGAGCCGCGATGATCAAACCCGAGGGACTATTGAGGCTCACTGATCGGAAGTCAAACG 296
Query 182 TTACCGGTACATCTTTCTACCACAAACCTGTGAGATTGCTGGAGACTAATACAAGTTCCA 241
|||||||||| |||||||||||||||| ||||||||||||||||||| || || |||||
Sbjct 297 TTACCGGTACGGCTTTCTACCACAAACCGGTGAGATTGCTGGAGACTAGTAGAAATTCCA 356
Query 242 CAAAC-TCCACAATCCGTTCTTTTAGCACTTCCTTCGTATTTGTCATCATCCCTACAAGC 300
||||| | || | | ||||| ||||||||||| ||| | |||||||| |||||| |||||
Sbjct 357 CAAACGT-CAGAGTTCGTTCCTTTAGCACTTCTTTCATCTTTGTCATAATCCCTTCAAGC 415
Query 301 TCTAGCAACGGAGGTTTTGGCTTCACCTTCACGCTATCTCCAACCCCTGATCGTAC-CGG 359
|| ||||| ||||||||| ||||| ||||| ||||||||||||||| ||||| | |
Sbjct 416 TCAAGCAATAAAGGTTTTGGATTCACATTCACACTATCTCCAACCCCTTATCGT-CTC-A 473
Query 360 A-GCCGAATCCGCACAGTACTTGGGACTTCTCAACAAAGCA-AACGACGGGAATTCGACG 417
| || | ||||||||||||||||||| || ||||||||| | ||| | ||| || | | |
Sbjct 474 ATGCTGGATCCGCACAGTACTTGGGAGTTTTCAACAAAG-AGAACAATGGGGATCCTAGG 532
Query 418 AATCACGTTTTTGCTGTGGAATTCGACACAGTGCAAGGTTTTA-A-A-GACGGTGCCGAT 474
||||||||||| || |||||||||||||| |||||||| | | | | ||| ||||
Sbjct 533 AATCACGTTTTCGCAGTGGAATTCGACACGGTGCAAGGATCCAGAGACGACAACACCGAC 592
Query 475 AGAACAGGCAATC-ACATCGGTCTGAATTTCAACAGT-TTAACATCTGATGTCCAAGAAC 532
|||| ||| || | ||||||||||||||| ||||||| | || || ||| | |||||||
Sbjct 593 AGAATAGG-AAACGACATCGGTCTGAATTACAACAGTCGT-ACTTCGGATCTACAAGAAC 650
Query 533 CGGTCGTGTATTACGACAACGAAGATCCTAACCGGAAAGAGGATTTCCCA-CTACAGAGT 591
| |||||||||||| |||| || ||||||||| ||||| ||||| ||| || |||||
Sbjct 651 CAGTCGTGTATTACAACAATGATGATCCTAACAAAAAAGAAGATTT-CCAGCTTGAGAGT 709
Query 592 GGCGATCCAATCCGAGCAATTTTGGATTACGATGGGCCAACTCAAACGCTAAACTTAACT 651
||| |||| || | ||| ||||||| || ||||| ||||| |||| ||||||| | ||
Sbjct 710 GGCAATCCGATTCAAGCCCTTTTGGAGTATGATGGACCAACACAAATGCTAAACGTCACC 769
Query 652 GTCTACCCGGCTA-ACTTGAAGTCTAGACCCGTAAGGCCTTTGATCTCGCGACCTGTTCC 710
|| || ||||| | | ||| || || |||| || |||||||||||| | || ||||||
Sbjct 770 GTTTATCCGGCGAGA-TTGGGGTTTAAACCCACAAAGCCTTTGATCTCTCAACATGTTCC 828
Query 711 AAAGTTG-TCGCAAATCGTGCAAGAAGAAATGTATGTTGGATTCACAGCAG-CTACAGGG 768
||| || | | | || |||||| ||||||||||||| |||||||| || | | || |||
Sbjct 829 AAAACTGTTAG-AGATTGTGCAACAAGAAATGTATGTCGGATTCACTGC-GTCGACGGGG 886
Query 769 AGAGATCAGTCGAGTGCTCACTACGTCATGGGCTGGAGTTTTTCTAGCGGCGGTGATCTT 828
| || ||||||||||||||| ||||| ||||| |||||||| || |||||||| || | |
Sbjct 887 AAAGGTCAGTCGAGTGCTCATTACGTAATGGGTTGGAGTTTCTCAAGCGGCGGAGAACGT 946
Query 829 CTAACTGAAGATACG--CTTGACCTCTTGGAACTTCCTCGTCCGCCTCCGAACACGGCGA 886
| || || || ||| || || |||| ||| ||||||| |||||| ||||| | |||||
Sbjct 947 CCAATTGCAG--ACGTCCTCGATCTCTCGGAGCTTCCTCCTCCGCCGCCGAATAAGGCGA 1004
Query 887 AG-AAGAGAGG-TTACAATTCTCAAGTAC-TCGCTCTGATCGTAG-CTCTATCGGGAGTA 942
|| |||| ||| ||| ||||||||||| | | | | ||||||| | || |||||| |||
Sbjct 1005 AGAAAGA-AGGTTTA-AATTCTCAAGT-CATTGTTATGATCGT-GTCTTTATCGGCCGTA 1060
Query 943 ACAG-TGATCTTGCTTGCGTTACTCTTCTTTTTCGTGATGTACAAGAAA-CGATTGCAAC 1000
| | || || |||||| ||| |||||||| ||||| |||||||| ||| ||||| ||
Sbjct 1061 A-TGCTGGTCATGCTTGTGTTGCTCTTCTTCTTCGTCATGTACAA-AAAGAGATTGGGAC 1118
Query 1001 AAGGAGAGGTTCTTGAAGACTGGGAAATCAATCATCCTCATAGACTT-AGATATAAAGAT 1059
||| |||| ||||||||||||||||||| ||||||||| ||| || ||||| | ||||
Sbjct 1119 AAGAAGAGACTCTTGAAGACTGGGAAATCGATCATCCTCGCAGA-TTGAGATACAGAGAT 1177
Query 1060 CTCTACGCT-GCTACGGATGGATTCAAGGAGAATAGGATTGTCGGAACTGGAGGATTTGG 1118
||||||| | || ||||||||||||||| ||| |||| ||||||| |||||||||||
Sbjct 1178 CTCTACG-TAGCCACGGATGGATTCAAGAAGACGGGGATCATCGGAACCGGAGGATTTGG 1236
Query 1119 AACCGTTTTCCGAGG-AAACTTATCGTCACCTTCGTCTGATCAAATCGCCGTGAAGAAGA 1177
|||||||||| ||| |||| || || |||| |||| ||||| ||||||||||
Sbjct 1237 AACCGTTTTCAAAGGAAAAC---TC-CCAAATTCG---GATCCCATCGCTGTGAAGAAGA 1289
Query 1178 TAACTCCGAATAGTATGCAAGGTGTTCGAGAATTCATCGCAGAGATCGAGAGTTTGGGGA 1237
||| ||| | ||| | |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1290 TAATTCCCAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGA 1349
Query 1238 GATTAAGGCATAAGAATCTGGTCAACCTTCAAGGATGGTGCAAGCaaaaaaaCGATCTCT 1297
||||||||||||||||||||| ||||| |||||||||||||| || |||||||||||||
Sbjct 1350 AATTAAGGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCT 1409
Query 1298 TGTTAATTTATGATTATATCCCTAACGGAAGCTTAGACTCGCTGCTCTACAGTAG-ACCA 1356
|||| ||||| ||||||||||| ||||||||||||||||| |||||||||| | | |||
Sbjct 1410 TGTTGATTTACGATTATATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACT-GTACCG 1468
Query 1357 AGACAG-AGCGGTGTTGTTTTGTCGTGGAACGCACGTTTTAAGATTGCTAAAGGAATCGC 1415
||| || ||||| | || |||||||||||||| ||||| |||| ||| ||||||||||
Sbjct 1469 AGA-AGAAGCGGCGCCGTGTTGTCGTGGAACGCGCGTTTCCAGATCGCTGAAGGAATCGC 1527
Query 1416 GTCTGGTTTGTTGTATCTCCATGAAGAATGGGAAAAGGTTGTGATTCACAGAGACATAAA 1475
|||||||||||||||||| || ||||||||||||||| ||||||||||||||||| | ||
Sbjct 1528 GTCTGGTTTGTTGTATCTTCACGAAGAATGGGAAAAGATTGTGATTCACAGAGACGTGAA 1587
Query 1476 ACCTAGCAACGTTTTGATTGAGGACGATATGAATCCTAGGTTGGGAGATTTTGGACTCGC 1535
||||||||||||||||||||| | | ||||| ||||| ||||||||||||||||||||
Sbjct 1588 ACCTAGCAACGTTTTGATTGATTCCAAGATGAACCCTAGATTGGGAGATTTTGGACTCGC 1647
Query 1536 GAGGCTTTACGAACGCGGATCGCAATCGAACACGACCGTAGTCGTGGGCACAATTGGGTA 1595
||||||||||||||||||| ||| |||| | || || | | |||| || || ||||||||
Sbjct 1648 GAGGCTTTACGAACGCGGAACGCTATCGCAGACAACAGCACTCGTTGGAACCATTGGGTA 1707
Query 1596 CATGGCACCAGAGCTAGCACGCAACGGCAAATCTTCGTCTGCGTCTGATGTTTTTGCGTT 1655
|||||| |||||||| | || |||||||| | || ||||||||||||||||| |||||
Sbjct 1708 CATGGCGCCAGAGCTCTCCCGAAACGGCAACCCCTCATCTGCGTCTGATGTTTTCGCGTT 1767
Query 1656 TGGCGTTTTGTTATTAGAGATAGTCTCCGGGAGAAGACCGACTGACTCAGGGA-CATTCT 1714
|||||||||| | ||||| || ||||||||||||| |||||| || || | | | ||||
Sbjct 1768 TGGCGTTTTGCTGTTAGAAATCGTCTCCGGGAGAAAACCGACGGATTCCTGTAGC-TTCT 1826
Query 1715 TCTTGGCCGATTGGGTTATGGAATTGCACGCGAGAGGAGAGATTCTCCATGCG-G-TGGA 1772
|||| | ||||||||||||||| | || ||||| || ||||| ||| | ||| | | ||
Sbjct 1827 TCTTAGTCGATTGGGTTATGGAGCTACAAGCGAGCGGTGAGATCCTC-A-GCGCGATCGA 1884
Query 1773 TCCGAGACTTGGATTTGGTTACGACGGCGTTGAGGCACGGCTTGCTCTTGTTGTGGGATT 1832
||||||||| |||| ||||||||||| | |||||| |||||||||||| ||||| ||
Sbjct 1885 TCCGAGACTCGGATCTGGTTACGACGAAGGAGAGGCAAGGCTTGCTCTTGCCGTGGGTTT 1944
Query 1833 GCTCTGTTGCCATCAAAGACCGACGTCTCGGCCGTCC-ATGAGAACGGTGCTTAGGTATT 1891
|||||||||||| |||| |||||||||||||||| || ||||||| |||||| |||||
Sbjct 1945 GCTCTGTTGCCACCAAAAACCGACGTCTCGGCCG-CCGATGAGAATGGTGCTCAGGTACC 2003
Query 1892 TGAACGGAGATGATGATGTACCTGAAATTGATAACGATTGGGGATACTCGGATTCTTCAA 1951
||||| |||| || ||||| ||||| ||||| | || |||||||| || | |||||||
Sbjct 2004 TGAACAGAGACGAGGATGTTCCTGAGATTGACGATGAGTGGGGATATTCAAAGTCTTCAA 2063
Query 1952 GAAGCGATTTAGGATCCAACTTTGAAGGATATGTTTCAT 1990
||||| | || |||||||| |||| |||||||| |||||
Sbjct 2064 GAAGCAAATTCGGATCCAATTTTGTAGGATATGATTCAT 2102
> Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1
Length=2299
Score = 1258 bits (681), Expect = 0.0
Identities = 1397/1732 (81%), Gaps = 91/1732 (5%)
Strand=Plus/Plus
Query 38 GAGCTCAAAGAACAACAACGGAGACTCCAAAAACAGAGTTTATTTTCCGA-GGTTTTAGC 96
||||||| | | ||||||| |||| | | ||||||||| ||||||| | ||||| |
Sbjct 309 GAGCTCAGATAGCAACAACAGAGA-T--GACAACAGAGTTCATTTTCC-ATGGTTTCAAA 364
Query 97 GGAAACCAAT-C-AAATAT-TG-TGACAACGGGAGCTGCGACGATCA-AACTCGACGGAC 151
|||||||||| | |||| | | || ||| |||| | | || |||| | | | ||||||
Sbjct 365 GGAAACCAATCCGAAAT-TCAGATG-CAA--GGAGATTCAACCATCACATC-CAACGGAC 419
Query 152 TATTGAGGCTCACTGACCGAAACTCAAACGTTACCGGTACATCTTTCTACCACAAACCTG 211
|||| |||||||| || |||||||| ||||| ||||||| |||||||||| ||||| |
Sbjct 420 TATTAAGGCTCACAGATCGAAACTCGGACGTTGTCGGTACAGCTTTCTACCATAAACCGG 479
Query 212 TGAGATTGCTGGAGACTAATACAAGTTCCACAAACT-CCACAATCCGTTCTTTTAGCACT 270
|||||||||| ||| | | || ||||| || | | || | ||||| |||||||||
Sbjct 480 TGAGATTGCT--CGAC-AGT--AA-CTCCACCAA-TACGACGGTTCGTTCCTTTAGCACT 532
Query 271 TCCTTCGTATTTGTCATCATCCCTACAAGCT---CTAGCAACGGAGGTTTTGGCTTCACC 327
|| ||||| || || | |||||| |||||| | |||||||||||||||||||||||
Sbjct 533 TCTTTCGTCTTCGT-A--ATCCCTTCAAGCTCAACAAGCAACGGAGGTTTTGGCTTCACA 589
Query 328 TTCACGCTATCTCCAACCCCTGATCGTACCGGA-GCCGAAT-CCGCA-CAGTACTTGGGA 384
||||| || ||||||||||| | |||| | || || | || ||| | |||| ||||||
Sbjct 590 TTCACACTCTCTCCAACCCCAAACCGTA-CAGACGCAG-ATCCCG-AGCAGTTCTTGGGG 646
Query 385 CTTCTCAAC-AAAGCAAACGACGGGAATTCGACG-AATCACGTTTTTGCTGTGGAATTCG 442
||||||||| |||| ||||||||||||||| | | |||||||||||||||||||||||||
Sbjct 647 CTTCTCAACGAAAG-AAACGACGGGAATTC-AAGCAATCACGTTTTTGCTGTGGAATTCG 704
Query 443 ACACAGTGCAAGGTTTTAAAGACGGTGCCGATAGAACAGGCAATCACATCGGTCTGAATT 502
|||| || ||||| || ||||||||| | || ||| |||||| ||||||||||| ||||
Sbjct 705 ACACGGTACAAGGATTCAAAGACGGTACAAATCGAATAGGCAACCACATCGGTCTAAATT 764
Query 503 TCAACAGTTTAACATCTGATGTCCAAGAACCGGTCG-TGTATTACGACAACGAA-GATCC 560
|||||||| | | || ||||||||||||||||| | | |||||| ||||| || ||
Sbjct 765 TCAACAGTCTCTCTTCAGATGTCCAAGAACCGGTGGCT-TATTACAACAAC-AACGA--- 819
Query 561 TAACCGGAAAGAGGATTTCCCACTACAGAGTGGCGATCCAATCCGAGCAATT-TTGGATT 619
|| | ||||||||| |||| ||| ||| ||||| ||||||| || || |||||||
Sbjct 820 TAGTCAGAAAGAGGAATTCCAACTGGTGAGCGGCGAGCCAATCCAAG-TCTTCTTGGATT 878
Query 620 A-CGATGGGCCAACTCAAACGCTAAACTTAACTGTCTACCCGGCTA-ACTTGAAGTCTAG 677
| | | || ||||| |||| ||| ||| | ||||| ||||| | | ||| | | | ||
Sbjct 879 ATC-ACGGACCAACCCAAATGCTTAACCTCACTGTTTACCCAACCAGACTGGGA-TATAA 936
Query 678 ACC-CGTAAGGCCTTTGATCTCGCGACCTGTTCCAAAGTTGTC-GCAAATCGTGCAAGAA 735
||| | || || |||||||| ||| |||||||| |||| | | || ||| |||
Sbjct 937 ACCAAG-AATCCCCTTGATCTCACGAGAGGTTCCAAAACTGTCAG-ATATTGTGGTAGAT 994
Query 736 GAAATGTAT-GTTGGATTCACAGCAGCTACAGGGAG--A--GATCAGTCGAGTGCTCACT 790
||||||| | || |||||||||||||| || ||||| | || || ||||||||||| |
Sbjct 995 GAAATGT-TCGTCGGATTCACAGCAGCGACTGGGAGACACGGA-CAATCGAGTGCTCATT 1052
Query 791 ACGTCATGGGCTGGAGTTTTTCTAGCGGCGGTGATCTTCTAAC-TGAAGATACGCTTGAC 849
| || ||||| |||||||| | |||||||| || | || || || || || ||| |||
Sbjct 1053 ATGTGATGGGTTGGAGTTTCGCAAGCGGCGGAGAACATC-CACTTGCAGCTATGCTCGAC 1111
Query 850 CTCTTGGAACTTCCTCGTCCGCCTCCGAACACGGCGAAGAAGAGAGGTTACAATTCTCAA 909
|||| ||||||||| ||||||||| || | || |||||||||||| |||||| | ||
Sbjct 1112 CTCTCCCAACTTCCTCCTCCGCCTCCAAATAAGGAGAAGAAGAGAGGCTACAATGGT-AA 1170
Query 910 -GTAC-TCGCTCTGATCGTAGCTCTATCGGGAGTAACAGT-GATCTTGCTT-GCGTTACT 965
|| | ||||||||||||| ||| ||||| || | | | |||| || || | ||| |
Sbjct 1171 GGT-CATCGCTCTGATCGTGGCTTTATCGACTGTTATA-TCGATCATG-TTGGTGTTGTT 1227
Query 966 -CTTCTTTTTCGTGATGTACAAGAAA-CGATTGCAACAAGGAGAGGTTCTTGAAGACTGG 1023
||| | ||| |||||||||| ||| ||| |||| |||| |||| |||| ||||| |||
Sbjct 1228 GTTTC-TCTTCATGATGTACAA-AAAGCGAATGCAGCAAGAAGAGATTCTAGAAGATTGG 1285
Query 1024 GAAATCAATCATCCTCATAGACTTAGATATAAAGATCTCTACGCTGCTACGGATGGATTC 1083
|||||| |||||||||| ||| || |||| | ||| ||||| |||||||| |||||||||
Sbjct 1286 GAAATCGATCATCCTCACAGATTTCGATACAGAGACCTCTATGCTGCTACTGATGGATTC 1345
Query 1084 AAGGAGAATAGGATTGTCGGAACTGGAGGATTTGGAACCGTTTTCCGAGGAAACTTATCG 1143
||||||||| ||||||||||||| |||||||| ||| |||| | |||||||| | ||
Sbjct 1346 AAGGAGAATCGGATTGTCGGAACCGGAGGATTCGGAGTTGTTTACAGAGGAAACATCTCA 1405
Query 1144 TCACCTTCGTCTGATCAAATCGCCGTGAAGAAGATAACTCCGAATAGTATGCAAGGTGTT 1203
||| |||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1406 TCATCTTCCTCTGAACAAATCGCAGTGAAGAAGATAACTCCGAATAGCATGCAAGGTGTT 1465
Query 1204 CGAGAATTCATCGCAGAGATCGAGAGTTTGGGGA-GATTAAGGCATAAGAATCTGGTCAA 1262
||||||||| |||||||||| |||||||| |||| |||||||||||||||||||||| ||
Sbjct 1466 CGAGAATTCGTCGCAGAGATAGAGAGTTT-GGGACGATTAAGGCATAAGAATCTGGTGAA 1524
Query 1263 CCTTCAAGGATGGTGCAAGCaaaaaaaCGATCTCTTGTTAATTTATGATTATAT-CCCTA 1321
||| ||||||||||| || || | ||||||||||||||| ||||| |||||||| ||| |
Sbjct 1525 CCTCCAAGGATGGTGTAAACACAGAAACGATCTCTTGTTGATTTACGATTATATACCC-A 1583
Query 1322 ACGGAAGCTTAGACTCGCTGCTCTACAGTAGACCAAGACAGA-GCGGTGTTGTTTTGTCG 1380
|||||||||||||||||||||||||||||| ||| ||| ||| |||| | |||||||||
Sbjct 1584 ACGGAAGCTTAGACTCGCTGCTCTACAGTAAACCGAGA-AGAAGCGGCGCGGTTTTGTCG 1642
Query 1381 TGGAACGCACGTTTTAAGATTGCTAAAGGAATCGCGTCTGGTTTGTTGTATCTCCATGAA 1440
|||||||| |||||| |||| || | ||||||||||||||||||||||||||| || ||
Sbjct 1643 TGGAACGCGCGTTTTCAGATCGCCAGAGGAATCGCGTCTGGTTTGTTGTATCTACACGAG 1702
Query 1441 GAATGGGAAAAGGTTGTGATTCACAGAGACATAAAACCTAGCAACGTTTTGATTGAGGAC 1500
|||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||
Sbjct 1703 GAATGGGAAAAGATTGTGATTCACAGAGACGTGAAACCTAGCAACGTTTTGATTGACGAC 1762
Query 1501 GATATGAATCCTAGGTTGGGAGATTTTGGACTCGCGAGGCTTTACGAACGCGGATCGCAA 1560
|||||||| ||||| ||||||||||| || || ||||||||||||||||||||||| |||
Sbjct 1763 GATATGAACCCTAGATTGGGAGATTTCGGGCTAGCGAGGCTTTACGAACGCGGATCTCAA 1822
Query 1561 TCG--AACACGACCGTAGTCGTGGGCACAATTGGGTACATGGCACCAGAGCTAGCACGCA 1618
||| ||| | ||||||||||| ||||| |||||||| ||||| || |||||||| ||||
Sbjct 1823 TCGCGAAC-C-ACCGTAGTCGTCGGCACGATTGGGTATATGGCGCCGGAGCTAGCCCGCA 1880
Query 1619 ACGGCAAA-TCTTCGTCTGCGTCTGATGTTTTTGCGTTTGGCGTTTTGTTATTAGAGATA 1677
|||| ||| || || || || || || ||||| ||||||||||||||| | ||||| ||
Sbjct 1881 ACGG-AAACTCCTCATCAGCTTCCGACGTTTTCGCGTTTGGCGTTTTGCTGTTAGAAATC 1939
Query 1678 GTCTCCGGGAGAAGACCGACTGACTCAGGGACATTCTTCT-TGGCCGATTGG 1728
||||||||||||| |||||| ||||| ||||| ||||| | | || ||||||
Sbjct 1940 GTCTCCGGGAGAAAACCGACGGACTCTGGGACCTTCTT-TATAGCGGATTGG 1990
> Ahg478190 jgi|Araly1|478190|fgenesh2_kg.3__891__AT3G08870.1
Length=2152
Score = 819 bits (443), Expect = 0.0
Identities = 1544/2054 (75%), Gaps = 161/2054 (8%)
Strand=Plus/Plus
Query 87 AGGTTTTAGCGGAAACCAATCA-AATATTGTGACA-ACGGGAGCTGCGACGATCAAACTC 144
|||||| | ||||||||| || || ||| ||| | |||||| |||||||| |||||
Sbjct 111 AGGTTTCAAAGGAAACCAAACAGAA-ATTCAAACAGA-AGGAGCTTCGACGATCCAACTC 168
Query 145 GAC--GGA-CTAT-TGAGGCTCACTGACCGAAACTC-AAACGTTACCGGTACATC-TTTC 198
||| || || | |||| || ||| | || ||| | |||||| || || || | |||
Sbjct 169 GACAATGATCT-TCTGAGACTAACTAATCGGAAC-CAAAACGTCACTGGAACCGCGTTT- 225
Query 199 TACCACAAACCTG-TGAGATTGCTGGAGAC-TAATACAAGTTCC-AC-AAACTCCACAA- 253
|||| |||||| | | ||||||| | ||| | | ||| |||| | | | | || ||
Sbjct 226 TACCGCAAACC-GATTAGATTGC--GTGACTTCA-CCAA-TTCCTCCGATA-T-CA-AAG 277
Query 254 TCCGTTCTTTTAGCACTTCCTTCGTATTTGTCATCATCCCTACAAGCTCTAGCAA-CGGA 312
|| |||| ||||||||||| ||||| || ||||| |||||| |||| || | || |||
Sbjct 278 TCTGTTCCTTTAGCACTTCTTTCGTGTTCGTCATAATCCCTTCAAG-TCCCGGAACCGGT 336
Query 313 GGTTTTGGCTTCACCTTCACGCTATCTCCAACCCCTG-ATCGTACC-GGAGCCGAATCCG 370
|||||||| ||||| ||||| || ||||| ||||| | ||||| || |||||| |||| |
Sbjct 337 GGTTTTGGTTTCACGTTCACACTTTCTCCGACCCC-GAATCGT-CCTGGAGCCAAATCTG 394
Query 371 CACAGTACTTGGGACTTCTCAACA-AAGCAAACGACGG-GAATTCGA-CGAATCACGTTT 427
||||||||||||| ||| | |||| || | ||| |||| | | || | |||||||||| |
Sbjct 395 CACAGTACTTGGGGCTTTTGAACAGAA-CCAACAACGGTG-A-TCCATCGAATCACGTAT 451
Query 428 TTGCTGTGGAATTCGACACAGTGCAAGGTTTTAAAGACGGTGCCGATAGAACAGGCAATC 487
| ||||| |||||||||| || ||||| ||||||||||| || || |||| ||| || |
Sbjct 452 TCGCTGTTGAATTCGACATGGTACAAGGATTTAAAGACGGCGCAGACAGAAGAGGAAACC 511
Query 488 ACATCGGTCTGAATTTCAACAGTTTAACATCTGATGTCCAAGAACCGGTCGTGTATTACG 547
|||||||||| |||||||||| | | || ||||| ||||| || || | |||||||
Sbjct 512 ACATCGGTCTTAATTTCAACAACCTCTCCTCCGATGTACAAGAGCCACTCATTTATTACG 571
Query 548 ACAACGAAGATCCTAACCGGAAAGAGGATTTCCCA-CTAC-AGAGTGGCGATCCAATCCG 605
|| || ||| | || ||||| ||||| || || | |||| ||||| ||||||||
Sbjct 572 AC-AC--AGA---GGATCGAAAAGAAGATTT-TCAGCT-CGAGAGCGGCGAACCAATCCG 623
Query 606 AGCAATTTTGGATTACGATGG-GCCAACTCAAACGC-TAAACTTAACTGTCTACCCGGCT 663
|| || | |||||||| || ||| | |||| | ||||| | || |||| ||| |
Sbjct 624 AGTTCTTGTCGATTACGACGGATCCAGC-GAAAC-CTTAAACGTCACAATCTATCCGACG 681
Query 664 A-ACTTGA-AGTCTAGACCCGTAAGGCCTTTGATCTCGCGACCTGTTCCAAAGTTGTCGC 721
| | || | ||| || |||| || ||| |||||||||| | ||| || || |||||
Sbjct 682 AGA-TT-AGAGTTTAAACCCAAAAAGCCCCTGATCTCGCGGCGAGTTTCAGAGCTGTCGG 739
Query 722 AAATCGTGCAAGAAGAAATGTATGTTGGATTCACAGCAGCTACAGGGAGAGATCAGTCGA 781
| || ||| | || |||||||| || |||||||| || || || || | ||| |||||||
Sbjct 740 AGATTGTGGAGGATGAAATGTACGTCGGATTCACCGCCGCGACTGGAAAAGACCAGTCGA 799
Query 782 GTGCTCACTACGTCATGGGCTGGAGTTTTTCTAGCGGCGGTGATCTTCTAACT-GAAGAT 840
|||||||||| || ||||| ||||||||||| ||| | || || || || | | |||
Sbjct 800 GTGCTCACTATGTAATGGGTTGGAGTTTTTCAAGCTGTGGAGAAAATCCAA-TGGCGGAT 858
Query 841 ACGCTTGA-CCTCTTGGAA-CTTCCTCGTCCGCCTCCGAACACGGCG-AAGAAGAGAGGT 897
||| || || | | ||| ||||||| ||| ||| || | | | || |||| ||||
Sbjct 859 TGGCTCGATCC-C-TCGAAGCTTCCTCTTCCACCT-CG--C-TTGAGTAACAAGAAAGGT 912
Query 898 TACAATTCTCAAGTAC-TCGCTCTGATCGTAGCTCTATCGGGAGTAACAGTGATCTTGCT 956
||| |||||||||| | | ||| |||| || ||| ||||| || ||| || |||||||
Sbjct 913 TACGATTCTCAAGT-CATTGCTTTGATTGTTGCTTTATCGATCGTCACATTGGTCTTGCT 971
Query 957 TGCGTTACT-CTTCTTTTTCGTGATGTACAAGAA-ACGATTGCAACAAGGAGAGGTTCTT 1014
|| |||||| || | ||| ||||||||||| || ||| | ||| ||| ||| ||||
Sbjct 972 TGTGTTACTGTTTATATTT-GTGATGTACAA-AAGGCGAATCCAAGAAGAAGATATTCTA 1029
Query 1015 GAAGACTGGGAAATCAATCATCCTCATAGACTT-AGATATAAAGATCTCTACGCT-GCTA 1072
|| |||||||| || || ||||||||||| || ||||| | |||||||||| | || |
Sbjct 1030 GAGGACTGGGAGATTGATTATCCTCATAGA-TTCAGATACAGAGATCTCTAC-TTAGCAA 1087
Query 1073 CGGATG-GATTCAAGGAGAATAG-GATTGTCGGAACTGGAGGATTTGGAACCGTTTTCCG 1130
| || | |||||| |||| | | ||| |||| || ||||||||||||| ||||| | |
Sbjct 1088 C-GAAGAAATTCAAAGAGAGT-GAGATCATCGGTACCGGAGGATTTGGAATCGTTTACAG 1145
Query 1131 AGGAAACTTATCGTCACCTTCGTCTGATCAAATCGCCGTGAAGAAGATAACTCCGAATAG 1190
||| || ||| | | |||| || | || |||||| ||||||||||| ||| | |||||
Sbjct 1146 AGG-AA---ATC-T-ATCTTCCTCGGGTCCAATCGCAGTGAAGAAGATTACTTCAAATAG 1199
Query 1191 -TATGCAAGGTGTTCGAGAATTCATCGCAGAGATCGAGAGTTTGGGGAGATTAAGG-CAT 1248
| | || |||||||||||||| | ||||||||||||||||| || ||||| ||| |||
Sbjct 1200 CT-TACATGGTGTTCGAGAATTTGTGGCAGAGATCGAGAGTTTAGGAAGATT-AGGTCAT 1257
Query 1249 AAGAATCTGGTCAACCTTCAAGGATGGTGCAAGCaaaaaaaCGATCTCTTGTTAATTTAT 1308
||||| || || || ||||||||||||||||| || || ||||| ||||||||||||||
Sbjct 1258 AAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAACGAGCTCTTGTTAATTTAC 1317
Query 1309 GATTATATCCCTAACGGAAG-CTTAGACTCGCTGCTCTACAGTA-GACCAAGACAG-AGC 1365
||||||||||| |||||||| ||| ||| ||||||| |||| | | || ||| || | |
Sbjct 1318 GATTATATCCCCAACGGAAGCCTT-GACGCGCTGCTGTACAAAACG-CCGAGA-AGAAAC 1374
Query 1366 GGTGTTGTTTTGTCGTGGAACGCACGTTTTAAGATTGC-T-AAAGGAATCGCGTCTGGTT 1423
|| ||||| ||| ||||| ||| ||||| ||| | | | || ||||||||||| ||
Sbjct 1375 GGCGTTGTGTTGCCGTGGGACGTGCGTTTCCAGA-T-CATCAAGGGAATCGCGTCGGGAC 1432
Query 1424 TGTTGTATCTCCATGAAGAATGGGAA-AAGGTTGTGATTCACAGAGACATAAAACCTAGC 1482
|||||||||| ||||||||||||||| || || || |||| ||||| | ||| | |||
Sbjct 1433 TGTTGTATCTTCATGAAGAATGGGAACAA-ATTCTGGTTCATAGAGATGTGAAAGCGAGC 1491
Query 1483 AACGTT-TTGATTGAGGACGATATGAATC-CTAGGTTGGGAGATTTTGGACTCGCGAGGC 1540
|| ||| || ||||| || |||||||| | ||| || || |||||||||||||| ||||
Sbjct 1492 AATGTTCTT-ATTGATGAAGATATGAA-CGCTAAATTAGGCGATTTTGGACTCGCTAGGC 1549
Query 1541 TTTACGAACGCGG-ATCGCAATCGAACACGACCG-TAGTCG-TGGGCACAATT-GGGTAC 1596
||||||||||||| | | || || | || | || ||||| |||| || || ||||||
Sbjct 1550 TTTACGAACGCGGAACCTTAA-CGCAGACCA-CGAAAGTCGTTGGG-AC-TTTAGGGTAC 1605
Query 1597 ATGGCACCAGAGCT-AGCACGCAACGGCAAA-TCTTCGTCTGCGTCTGATGTTTTTGCGT 1654
|||||||| ||||| | |||| ||||| ||| | ||| | |||||||||||||||||||
Sbjct 1606 ATGGCACCTGAGCTCA-CACGTAACGGTAAAGGC-TCGACAGCGTCTGATGTTTTTGCGT 1663
Query 1655 TTGGCGTTTTGTTATTAGAGATAGTCTCCGGGAG-AAGACCGACTGA-CTCAGGGA-CAT 1711
|||||||||| || || || ||||| | |||| || ||| || || | ||| || | |
Sbjct 1664 TTGGCGTTTTATTGTTGGAAATAGTGTGTGGGAATAA-ACCAAC-GAACGCAGAGAAC-T 1720
Query 1712 TCTTCTTGGCCGATTGGGTTATGGAATTGCACGCGAGA-GGAGAGATTC-TCCATGCG-- 1767
||||||| || |||||||| ||||| || ||| | | | || | || || | | |||
Sbjct 1721 TCTTCTTAGCTGATTGGGTAATGGAGTTTCACACTA-ATGGTG-GAATCCTT-A-GCGCC 1776
Query 1768 GTGGATCCGAGACTTGGATTTGGTTACGACGGC-GTTGAGGC-ACGGCTT-GCTCTTGTT 1824
||||||| || ||| |||| | ||| | ||| | ||||| | || |||||| ||
Sbjct 1777 GTGGATCAGAAACTCGGATCTAGTTTTAATGGCAGA-GAGGCTAAA--TTAGCTCTTATT 1833
Query 1825 GTGGGATTGCTCTGTTGCCATCA-AAGACCGACGTCTCGGCCGTCCATGAGAACGGTGCT 1883
|||||||| |||||||||||||| || |||||| | |||||| || ||||||| ||||||
Sbjct 1834 GTGGGATTACTCTGTTGCCATCAGAA-ACCGACATATCGGCCATCGATGAGAATGGTGCT 1892
Query 1884 TAGGTATTTGAACGGAGATGATGA-TGTACCTGAAATTGAT--AACGATTGGGGATACTC 1940
||| ||| |||| || || || || ||| || | |||||| || ||||||||| ||
Sbjct 1893 TAGATATCTGAATGGTGAAGA-GAATGTTCCACAGATTGATGGAA--ATTGGGGATT-TC 1948
Query 1941 -GGATTCTTCAAGA-AGCGAT-TTAGGATCCAACTTTGA-AGGATATGTTTCATCGGATA 1996
|| |||||||||| | |||| ||| | | || | || ||| |||||||| || ||||
Sbjct 1949 CGGGTTCTTCAAGAGA-CGATCTTAAAA-CGAA-TGTGGTAGGTTATGTTTCGTCCGATA 2005
Query 1997 GGGCTTCGAGCTC-AGTCCCATCTTTC-TCCGT-TACAAGGGTTTCTTCTAGTTCTGTTA 2053
| || |||||||| | | | | |||| || | | | ||| ||||||| || ||| |
Sbjct 2006 GAGCCTCGAGCTCGAATACT-T-TTTCGTCTTTCTCCGAGG-TTTCTTCAAGCTCTATCG 2062
Query 2054 TCAGTGGTAGATAG 2067
| ||||||||||||
Sbjct 2063 TTAGTGGTAGATAG 2076
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77742190045
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5