BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G01730.1
Length=3700
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486894 jgi|Araly1|486894|fgenesh2_kg.6__28__AT5G01730.1 4710 0.0
> Ahg486894 jgi|Araly1|486894|fgenesh2_kg.6__28__AT5G01730.1
Length=3680
Score = 4710 bits (2550), Expect = 0.0
Identities = 3232/3542 (91%), Gaps = 123/3542 (3%)
Strand=Plus/Plus
Query 203 CTGCAGCACGAGGTCATGGTTTGGCGATGCGTCTCCAACACCTCGAAGCAGACTTCCCTT 262
||| ||| |||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct 164 CTG-AGCTCGAGGTCATGCTTTGGCCATGCGTCTCCAACAGCTCGAAGCTGACTTTCCTG 222
Query 263 C-AGTTGAGATACCCATTCTCTCTCAAACCGATCATTCTACATTCTTTTATG----A-GC 316
| | |||||||||||||||||||||||||| ||||||||||||||||||||| | ||
Sbjct 223 CTA-TTGAGATACCCATTCTCTCTCAAACCCATCATTCTACATTCTTTTATGATTCAGGC 281
Query 317 CAGGCTTGGAATGGCATTCTGATCTGCAAACAAAAGAAGACTTGATTTCCCCACGGAACT 376
|| |||| ||||||||||| ||||||||| |||||||||| ||||||||||||| ||||
Sbjct 282 CA-GCTTCAAATGGCATTCTAATCTGCAAATAAAAGAAGACCTGATTTCCCCACGCAACT 340
Query 377 TGCCTCGTTGTATAATGGATTCGTACGAGGAATGCCATGGTCCGCCGCAGCTTTTCCTTC 436
|||||| ||||||||||||||| ||| ||||||||| || |||||||||||| |||||||
Sbjct 341 TGCCTCATTGTATAATGGATTCATACCAGGAATGCCGTGCTCCGCCGCAGCTCTTCCTTC 400
Query 437 TCGACAAGTTTGATGTTGCTGGGTCTGGATCATGCTTGAAGCGTTACTCTGATCCATCTT 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 TCGACAAGTTTGATGTTGCTGGGTCTGGATCATGCTTGAAGCGTTACTCTGATCCATCTT 460
Query 497 TATTGAAGACACATACTACATCAGCAGTAGTAGCAACATCCAAACTCGGGAAAGATAAGC 556
|||||||||| |||||| |||||||||||||||||||||| |||||| | |||||| |||
Sbjct 461 TATTGAAGACGCATACTGCATCAGCAGTAGTAGCAACATCAAAACTCAGCAAAGATGAGC 520
Query 557 GACTACGTCAATCAAAGAAGAAAGGATCTCACACAACTATTAAAGAGACGCCTGAGGATT 616
| | |||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct 521 GGCCACGTAAATCAAAGAAGAAAGGATCACACACAACTAGTAAAGAGACCCCTGAGGATT 580
Query 617 CACGGACATCACATGCCAAGTTGCATCAGCTATTCTTTTTGGAGCATGTTGAGAACGGAC 676
| | | ||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 581 --C--A-A-CACATGCCAAGTTGCATCAGCTATTCTTTTTGGAGCACGCTGAGAACGGAC 634
Query 677 ACAGAAATCCTGAATTCCATGTGAAACTGAAGAGAAGACAGCTGAATGGACCTCCGATTA 736
||| ||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct 635 ACAAAAACCCTGAATTCCATGTGAAACTGAAGAAAAGACAGTTGAATCGACCTCCGATTA 694
Query 737 ACTCAAGCTCTGGGGCAAGTTACATGGAGAAATTCCTCAAGAATTCTTCACCATACTGTG 796
|||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 695 ACTCAAGCTCCGGGACAAGTTACATGGAGAAATTCCTCAAGAATTCTTCGCCATATTGTG 754
Query 797 AAAGAGTTCATGGGACTATGGATCAGTCATCTCCGGCAATGGAAACTGAAGTTACAGTAT 856
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 755 AAAGAGTTCATGGGACTCTGGATCAATCATCTCCGGCAATGGAAACTGAAGTTACAGTAT 814
Query 857 GCAGTGAACAAGAAGACTTACCAATACCTTCCTTAGTTTATTCC-AACAGTGGAGGCACT 915
|||| | ||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||
Sbjct 815 GCAGCGTACAAGAAGACTTACCAAAACCTTCCTTAGTTTA-TCCAAACAGTGGAGACACT 873
Query 916 AGAAAATACAATGAGATGGAGATAGAATCCATTGCTGGTCATGAAATACTTGAAATTCCT 975
||||||||||||||||||||||| ||||||||| ||| | |||||| | |||||||||||
Sbjct 874 AGAAAATACAATGAGATGGAGATGGAATCCATTACTGATGATGAAAGAATTGAAATTCCT 933
Query 976 TTTGTTCCTCACGAGATTACGGTTAATGAG-A------A--G----T--------CACCA 1014
||||||||||| |||||||||||| ||||| | | | | |||||
Sbjct 934 TTTGTTCCTCATGAGATTACGGTTGATGAGAAGTCTTTACCGAATATAGAGGAAGCACCA 993
Query 1015 GTGGTTTGTTTAGAAAGTAGCTCTTCTGTGAATTTGTGTTGCAAGACGAACAATGACGCA 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 GTGGTTTGTTTAGAAAGTAGCTCTTCTGTGAATTTGTGTTGCAAGACGAACAATGACGCA 1053
Query 1075 GATTCACCTGCTTCCACGGAGTCAGAGGTAAAGGAAGCAGGGAGTGATGACAAGGCTGGA 1134
||| ||||||||||||||||||| || | |||||||||||| |||||||||||||||||
Sbjct 1054 GATGCACCTGCTTCCACGGAGTCGGAAGCAAAGGAAGCAGGAAGTGATGACAAGGCTGGC 1113
Query 1135 TGTGACCATGGATTTCCAGGATTTGGTCAGCCGCAGATCTGTACTAATGCAGAAGTGAAT 1194
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1114 TGTGACCTTGGATTTCCAGGATTTGGTCAGCCGCAGATCTGTACTAATGCAGAAGTGACT 1173
Query 1195 CAAACAGAGGTTCTGACTCAGTTTTCTAATGTTTTGCGCCACTCACCGGAGGAAGGAGAA 1254
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1174 CAAACAGAGGTTCTGACTCAGTTTTCTAATGTTTTGCACCACTCACCGGAGGAAGGAGAA 1233
Query 1255 TCTAGTCTTTTGTGTACTGATATCCAGAGAGCTTCTCCTGAAAGTAAACCACATAAAGCT 1314
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 TCTAGTCTTTTGTGCACTGATATCCAGAGAGCTTCTCCTGAAAGTAAACCACATAAAGCT 1293
Query 1315 GAAGAGGCTGCTGTAGATTTAGACGAGTCATTTTCCCAGATGACACCGGACATAGATTCC 1374
||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||
Sbjct 1294 GAAGAGGCTGCTGTAGAATTAGACAAATCATTTTCCCAGATGACACCGGACATAGATTCC 1353
Query 1375 GCAGGCATGGGGACTCTGGAGATCTTACAAACACCTTTCAGTTTGTCTTGCTACGAGAGT 1434
|||||||||| |||||||||| || |||||||||||||||||||||||| ||||||| |
Sbjct 1354 GCAGGCATGGAGACTCTGGAGCTCAAACAAACACCTTTCAGTTTGTCTTGTTACGAGAAT 1413
Query 1435 CCTGCAAATCTTCCCGAAGATTCTGGAAGTCACTTGGAGCTTCAGTCCAAT--A--AA-- 1488
||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||
Sbjct 1414 CCTCCAAATCTTCCCGAAGATTCTGAAAGTCACTTGGAGCTTCAGTCCAATAAAGCAAGT 1473
Query 1489 GC------AA---A--TG-------CTGAAGCTTGTGAGGTCTTTGAAGTCAGAAGGGAT 1530
|| || | || ||||||||||||||||||||||||||||||| |||
Sbjct 1474 GCTGATGAAATTGAGTTGAAATCATCTGAAGCTTGTGAGGTCTTTGAAGTCAGAAGAGAT 1533
Query 1531 CCCATGCTTAATATTTCCCCTGAAACTCATCTTTTAAAGGTTACACAAGTGCCACAGGAC 1590
|| |||||||||||||||| ||||||| |||| |||| | || | ||||||||
Sbjct 1534 CCTATGCTTAATATTTCCCGTGAAACTTATCTGTTAATGCTT-----A----CACAGGAC 1584
Query 1591 GCATATGAGGGTGGGACCAATGATGTTCATTCTCAACATGTTTTCAGTGTGGAGACTGCA 1650
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1585 GCATCTGAGGGTGGGACCAATGATGTTCATTCTCAACATGTTTTCAGTGTGGAGGCTGCA 1644
Query 1651 TCTGAGATATCTGTAAGTGCTTTAGTGGAAGACCAGTTCTCTTCCATAACCAATCAAGAG 1710
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1645 TCTGAGATATCTTTGAGTGCTTTAGTGGAAGACCAGTTCTCTTCCATAACCAATCAAGAT 1704
Query 1711 ATAGAGGCTCTGGAATCCGAGGACATTTCTTCTGAAGCTGGTCATTTCATTCCAGATACC 1770
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1705 ATAGCGGCTCTGGAATCCGAGGACATTTCTTCTGAAGCTGGTCATTTCACTCCAGATACC 1764
Query 1771 AAAAAGAGTTTAAATGAAACATCAGTGGCATTGGAGTCCGATTTTCTTCTTCCAAATCAT 1830
|||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||
Sbjct 1765 AAAACGAGTTTAAATGAAACACCAGTGGCATTGGAGTCTGATTATCTTCTTCCAAATCAG 1824
Query 1831 TACATTAGCACATTTGACAACTTTGAAGATTTATCTCTGTCTGCTGATGCACAGGATTAT 1890
||||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||
Sbjct 1825 TACATTAGCACATTTGAAAACTTTGAAGATTTAACTCTGGCTATTGATGCACAGGATTAT 1884
Query 1891 GCTGCCCCA-AAAGAAGATGAAACGAACTCCCAAGACGGATCTTCCATGAATCCTGCACA 1949
|||| || | || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1885 GCTGTCCTAGTAA-AAGATGAAACGAACTCCCAAGACGGATCTTCCATGAATCCTGAACA 1943
Query 1950 GTCAAAACACATTTCAACTTCTGAAATCAGTTCAGAAAATGGAACTCTGATGTCAGATAC 2009
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1944 GTCTAAACACATTTCAACTTCTGAAATCAGTTCAGAAAACGGAACTCTGATGTCAGATAC 2003
Query 2010 TCCAAGAGATCTTCACACAGGATACGGGAGCCTCTCAGCCTCATCTTGTCTGGAAGACGG 2069
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2004 TCCAAGAGATCTTCACACAGGATACGGGAGCCTCTCAGCCTCATCTTTTCTGGAAGACGC 2063
Query 2070 ATTGGCCAACCCTGATCTGGCTGAGATATCATCATATTCTGGACAGGAGGATCCACAAAC 2129
|||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 2064 ATTGGCCAACCCTGTTCTGGCTGAGATATCATCATATTTTGGGCAGGAGGATCCACAAAC 2123
Query 2130 CATGTCTATTGTTTCAGATGATAGTAGTGACCCTGAGGTACCAATTCCTGATGGTACTTG 2189
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2124 CATGTCTATTGTTTCAGATGATAATAATGACCCTGAGGTACCAATTCCTGATGGTACTTA 2183
Query 2190 TTTTGCAGGTGAT-GTCGATCACGATAACCAGACTGGCCTGAATAATAAGGCCATTGAGA 2248
||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2184 TTTTGCAGGTGATGGT-GATCACGATAACCAGACTGGCCTGAATAATAAGGCCAATGAGA 2242
Query 2249 CCGTGCCCCAGAA-AGAATTGGAAACTATTAGTGATCCACAGGAGAGTCTTTTAGGTACA 2307
||||| |||| || ||| ||||||||||||||| ||||||| |||||||||||||||||
Sbjct 2243 CCGTGTCCCA-AATAGACTTGGAAACTATTAGTAATCCACATGAGAGTCTTTTAGGTACT 2301
Query 2308 GAAGAATGTCTTTCATCTGAGTATTGCTTACAGATACAGAACCAAAGGCAAGAAAGTCCA 2367
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2302 GAAGAATGTCTTTCATCTGAGTATTGCTTACAGATACAGAACCAAGGGCAAGAAAGTCCA 2361
Query 2368 TCAGAAACAGGGTCAGCAAATTCAAGAACATCATCAGACGAGTCTCCTCCTACACAAAAT 2427
|| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 2362 TCGGAAACAGGGTCAGCAAATTCAATAACATTATCAGCCGAGTCTCCTCCTACACAAAAT 2421
Query 2428 GGATCTGTTGGTGTTCAAAGTTCA-C-----------C-TT----T---A-G---ATGTT 2463
||||||||||||||||||| |||| | | || | | | | |||
Sbjct 2422 GGATCTGTTGGTGTTCAAAATTCACCATTGGAGGAAGCGTTAACATGCAACGAAAAGGTT 2481
Query 2464 TTTCCTTCAAGCATAACTGAAATAGAAGCTCTTCATGCACCATACCAGGAAATTTTCACA 2523
|| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 2482 TTCCCTTCGAGCATAACTGAAATAGAAGCTCTTCATGCACCACACCAGGAAACTTTCACA 2541
Query 2524 TCATTAAATGATCATATCTCTGAGTCTGTTCTTTCCAAGGGTCTGACTGATGAAGAAGAT 2583
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2542 CCATTAAATGATCATATCTCTGAGTCTGTTCTTTCCACCGGTCTGACTGATGAAGAAGAT 2601
Query 2584 TTCTTGAACGTATCCCCTGAGTCCATACTACCCCTCTCCACGTCCCTCCATGAAACACCT 2643
|||||| |||| |||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 2602 TTCTTGGACGTGTCCCCTGAATCCATGGTACCCTTCTCCACGTCCCTCCATGAAACACCT 2661
Query 2644 CAGGCAAATCCGGAGATAACACCTCCGCTTCCGCCTCTTCCTCCGACACAATGGTGGATG 2703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2662 CAGGCAAATCCGGAGATAACACCTCCGCTTCCGCCTCTTCCTCCGACACAATGGTGGATG 2721
Query 2704 GGGAAGCTGGTTGAATCAACCGAAATGCCATCACTTGCAGGCAGTGGAAACAACAGTTTC 2763
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 2722 GGGAAGCTGGTTGAATCAACCGAAATGCCTTCACTTTCAGGCAGTGGAAACAACAGTTTC 2781
Query 2764 AACATCCAGAGGGATGAAAACACACAGAATGGATCAGTTCAAGCGAACGAGGCACAATAT 2823
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2782 AACATCCATAGGGATGAAAACACACAGAATGGATCAGTTCAAGCGAACGAGGCACAGTAT 2841
Query 2824 CCATCAGAAGTGTCGGTTACAGATGGTGAAAACCATAATTTTCATATTTATACAGAAGAA 2883
|||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||
Sbjct 2842 CCATCAGAAGTGTCGGTTACGGATGGTGAAAACCACAATTCTCATGTTTATACAGAAGAA 2901
Query 2884 TCTAAAGCAACCGAGGAACAGTCTCCTTCAGGAGTCAATGGGACAAGCGACACCTATATG 2943
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2902 TCTAAAGCAACCGAGGAACAGTCTCCTTCAGCAGTCAATGGAACAAGCGACACCTATATG 2961
Query 2944 GAAAGTAAACACAAGTGTTTAAATAGAACTCCGGAGGATTCATTTTCTTTGGCAGAATCG 3003
|||||||||||||||| ||||||||||| || ||||||||||||| |||||| |||||||
Sbjct 2962 GAAAGTAAACACAAGTTTTTAAATAGAAATCAGGAGGATTCATTTGCTTTGGAAGAATCG 3021
Query 3004 GCCCAAGGCTTAGAAGCTGACTGGAGGACTGAAGCAATGGCACTTGAATGGTTTAGTCAG 3063
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3022 GCTCAAGGCTTAGAAGGGGACTGGAGGACTGAAGCAATGGCACTTGAATGGTTTAGTCAG 3081
Query 3064 AACTTAAGAGAGCATAACAATCCCCACCCTGCAAAGTTAGAAGAGGAAGAGCCTCAGGTT 3123
|||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||
Sbjct 3082 AACTTAAGAGAGCATAACAATCGTCACCCTGCAAAGTTAGGAGAGGAACAACCTCAGGTT 3141
Query 3124 GATCACCCACTAGAAAAACCTGGACAAACCA-AATTTCGACAAACCTTGCGAGACAATAA 3182
||||| ||||||||| |||| ||||||| | |||||||||||||||| |||||||||||
Sbjct 3142 GATCATCCACTAGAACAACCAGGACAAAT-AGAATTTCGACAAACCTTACGAGACAATAA 3200
Query 3183 CTCATAT-AATCAGAATCAGAAAGCTGGAAAGCTTAAAAGAGACGAGGATACGCTTGTTA 3241
||||||| || ||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 3201 CTCATATGAA-CAGAATCTGAAAGCTGGAAAGCTCAAAAGAGACGAGGATACGCTTGTTA 3259
Query 3242 TTGGCATTGACAGAAGCATGTTGAGGAAAGTATCTGAA-GGGAACAGGACACACGTTGGA 3300
||||||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||||
Sbjct 3260 TTGGCATTGACAGAAGCATGTTGAGAAAAGTATCTGAACGGGA-CAGGACACAAGTTGGA 3318
Query 3301 GCTCGAGTGGACGAGAATGATTCACTACTAGAGATCATACGGAGCAAGTCGTTCAACCTG 3360
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3319 GCTAGATTGGACGAGAATGATTCACTACTAGAGATCATACGGAGCAAGTCGTTCAACCTG 3378
Query 3361 AGACCAGCAGATGCCTCAGGGAGACCAAACTTTCAAGTAGCTGTTCCCAAAACCAACTTG 3420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3379 AGACCAGCAGATGCCTCAGGGAGACCAAACTTTCAAGTAGCTGTTCCCAAAACCAACTTA 3438
Query 3421 AAGGTGGCTGCAATTCTAGAGAAAGCCAACACTCTTCGCCAGGCAATGGCGGGAAGTGAC 3480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3439 AAGGTGGCTGCAATTCTAGAGAAAGCCAACACTCTTCGCCAGGCAATGGCAGGAAGTGAC 3498
Query 3481 GACGAGCACGATTCAGATAGCTGGAGCGAGTGAGTCGTTGAATCAAATCTGCAGGTAACA 3540
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3499 GACGAGCACGATACAGATAGCTGGAGCGAGTGAGTCGTTGAATCAAATCTCCAGGTAACA 3558
Query 3541 AACATATAGAT--CA---C--AC--TCTGTATAGAAGAATT---CTCACATTGTATGTAT 3588
||||||||||| || | || ||||||||||| |||| |||| |||||||||||
Sbjct 3559 AACATATAGATGACAATACTCACACTCTGTATAGAAAAATTGTTCTCAAATTGTATGTAT 3618
Query 3589 TCTCACAA----GTAATGTTTTTATTGCTGTATTTTTGACACATTGTAAGTCACTCTGtt 3644
||| || ||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 3619 TCTTTGAATCTCGTAATGTTTTTATTGCTGTCTTTTTGACACATTGTAAGTCGCTCTGTT 3678
Query 3645 tt 3646
||
Sbjct 3679 TT 3680
Score = 289 bits (156), Expect = 1e-76
Identities = 164/168 (98%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 1 ATGGCATTGACGAGATACCAGATACGGAACGAGTACGGCTTAGCGGATAAGGAGCTCTAC 60
|||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||
Sbjct 1 ATGGCATTGACGAGATACCAGATACGCAACGAGTACGGCTTGGCTGATAAGGAGCTTTAC 60
Query 61 CAATCCGCCGATAAGGAGGATCCTGAAGCTTTGCTCGAAGCTGCTTCCATGGCTGGTCTC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CAATCCGCCGATAAGGAGGATCCTGAAGCTTTGCTCGAAGCTGCTTCCATGGCTGGTCTC 120
Query 121 GTCGGCGTTTTGCGCCAGCTTGGCGACCTCTCTGAGTTTGCTGCTGAG 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTCGGCGTTTTGCGCCAGCTTGGCGACCTCTCTGAGTTTGCTGCTGAG 168
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139785465629
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5