BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G01770.1
Length=4448
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478188 jgi|Araly1|478188|fgenesh2_kg.3__889__AT3G08850.1 3352 0.0
Ahg486889 jgi|Araly1|486889|fgenesh2_kg.6__23__AT5G01770.1 2410 0.0
> Ahg478188 jgi|Araly1|478188|fgenesh2_kg.3__889__AT3G08850.1
Length=4797
Score = 3352 bits (1815), Expect = 0.0
Identities = 3159/3800 (83%), Gaps = 124/3800 (3%)
Strand=Plus/Plus
Query 465 CCCCAAGATGGCGCCTTAAAGAGCGAATGAAAACAGGATGTGTTGCTCTAGTTATGTGTT 524
|||||| |||||| |||||||| |||||||||||||||||||| ||| ||||| ||||||
Sbjct 660 CCCCAA-ATGGCGGCTTAAAGAACGAATGAAAACAGGATGTGTAGCTTTAGTTTTGTGTT 718
Query 525 TGCACATTACTGTTGATCCCCCTGATGTTATTAAGATTTCTCCCTGCGCAAGACTCGAAT 584
|| | |||||||||||||| || |||||||| ||||| ||||| || || ||| ||| |
Sbjct 719 TGAATATTACTGTTGATCCGCCGGATGTTATAAAGATATCTCCATGTGCTAGAATCG-AG 777
Query 585 GC-TGGATAGATCCTTTTTCTATGTTTCCCCCAAGAAGAGCTCTTGAGGCTATTGGCCAA 643
|| ||||||||||| ||||| ||| || || || |||||||||| | ||||| ||
Sbjct 778 GCATGGATAGATCCATTTTCCATGGCACCGCC--TAA-AGCTCTTGAGACAATTGGAAAA 834
Query 644 AACTTGAGCATTCAGTACGAGAGATGGCTGGCTCGGGCTCGATATAAAG-TCGAATTGGA 702
|| ||||| | |||||| |||||||||| | |||| || ||||| | || | | ||
Sbjct 835 AATTTGAGTACTCAGTATGAGAGATGGCAACCAAGGGCCCGCTATAAGGTTC-AGCTAGA 893
Query 703 TCCTACA-AAGGACGATGTCAGGAAGCTCTGCTTGTCTTGCCGGAAATATGCAAAGACTG 761
||| ||| | || || || |||||||| |||||| |||| ||||||||||||||||| |
Sbjct 894 TCCGACAGTA-GATGAGGTGAGGAAGCTGTGCTTGACTTGTCGGAAATATGCAAAGACCG 952
Query 762 AGAGAGTTTTGTTTCACTATAACGGGCATGGTGTCCCTAAA-CCTACACCTAATGGTGAA 820
|||||||| | || || ||||| ||||||||||| || ||| |||||| |||||||||||
Sbjct 953 AGAGAGTTCTATTCCATTATAATGGGCATGGTGTGCC-AAAGCCTACAGCTAATGGTGAA 1011
Query 821 ATCTGGGT-TTACAATAAGAATTTTACGCAGTACATTCCCTTGCCAGTCAGCGAGCTTGA 879
|| ||||| || ||| |||| || ||| |||||||||||||||||| |||| ||||||||
Sbjct 1012 ATTTGGGTATT-CAACAAGAGTTATACACAGTACATTCCCTTGCCAATCAGTGAGCTTGA 1070
Query 880 TTCCTGGTTGAAAACACCCACCATTTACGTTTTTGACTGCTCTGCTGCTAGGGTGATCCT 939
|||||||||||| |||||| |||| || |||||||||||||||||||||||| |||| ||
Sbjct 1071 TTCCTGGTTGAAGACACCCTCCATCTATGTTTTTGACTGCTCTGCTGCTAGGATGATTCT 1130
Query 940 CAATGCC-TT-C---GC--C--GA-GGGGGAATCTTCTGG-ACC-C-----CC-GAA-GG 980
|||||| || | || | || ||| |||||||| || | || || ||
Sbjct 1131 TAATGCCTTTGCTGAGCTTCATGATATGGG-TTCTTCTGGTTCCTCTGGATCCTCAAGGG 1189
Query 981 ACTGTATTCTACTGGCTGCTTGTGATGTACATGAGACACTTCCTCAGAGTGTTGAATTTC 1040
|||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct 1190 ACTGCATTCTACTTGCTGCTTGTGATGTACATGAGACACTTCCACAGAGCGTTGAGTTTC 1249
Query 1041 CAGCTGACGTTTTTACTTCTTGCCTCACAACACCTATTAATATCGCATTGAAATGGTTCT 1100
||||||| |||||||| ||| |||||||||| || ||||| || || |||||||||||||
Sbjct 1250 CAGCTGATGTTTTTACGTCTAGCCTCACAACGCCCATTAAAATGGCGTTGAAATGGTTCT 1309
Query 1101 GCAGACGTTCTCTTCTGAAAGAATTTATAGATGAATCACTTATTGATAGAATTCCCGGTC 1160
|||| ||||| |||||||||||| | || ||||||||||||||||| | ||||| || |
Sbjct 1310 GCAGGCGTTCGCTTCTGAAAGAAATCATCGATGAATCACTTATTGACCGGATTCCAGGCC 1369
Query 1161 GCCAAAATGACCGTAAAACATTGTTAGGAGAGTTGAACTGGATCTTCACTGCAGTCACAG 1220
| |||||||||||||| ||||||||||| |||||||||||||| || || ||||| || |
Sbjct 1370 GGCAAAATGACCGTAAGACATTGTTAGGGGAGTTGAACTGGATTTTTACAGCAGTGACGG 1429
Query 1221 ACACCATTGCCTGGAATGTGCTTCCACGCGAACTTTTCCAGAGATTATTCAGACAGGACT 1280
| || ||||| |||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1430 ATACAATTGCATGGAATGTGCTTCCTCATGAACTTTTCCAGAGATTATTCAGACAGGACT 1489
Query 1281 TGTTGGTTGCTAGCCTTTTCCGAAATTTCTTACTAGCTGAGAGGATAATGCGGTCCGGAA 1340
||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||| ||
Sbjct 1490 TGTTGGTCGCTAGCCTTTTCCGGAATTTCTTACTTGCTGAGAGAATAATGCGGTCCGCAA 1549
Query 1341 ATTGTACCCCAATATCACATCCTATGCTACCTCCTACGCATCAGCATCATATGTGGGATG 1400
| |||| |||||||| || |||||||| |||||||||||||| ||||||||||||||||
Sbjct 1550 ACTGTAATCCAATATCTCACCCTATGCTGCCTCCTACGCATCAACATCATATGTGGGATG 1609
Query 1401 CATGGGACATGGCTGCTGAAATCTGCCTTTCTCAGCTTCCTCAATTTTTTCTGGACCCAA 1460
||||||||||||||||||||||||| |||||||| ||||| ||| || ||||||||||||
Sbjct 1610 CATGGGACATGGCTGCTGAAATCTGTCTTTCTCACCTTCCCCAACTTGTTCTGGACCCAA 1669
Query 1461 ATACGGAGTTTCAGCCAAGTTCATTTTTCACTGAGCAACTGACAGCTTTTGAGGTCTGGC 1520
| || || ||||||||| | ||||||||||||||| |||||||||||||||| ||||
Sbjct 1670 CCGCAGAATTCCAGCCAAGTCCGTTTTTCACTGAGCAATTGACAGCTTTTGAGGTGTGGC 1729
Query 1521 TGGATCATGGATCTGAGCATAAGAAGCCACCAGAGCAGTTACCTATTGTTCTTCAGGTCT 1580
| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct 1730 TTGATCATGGATCTGAGCATAAGAAGCCACCGGAGCAGTTACCCATTGTTCTTCAGGTGT 1789
Query 1581 TACTTAGCCAGTGCCATCGGTATCGTGCTCTGGTGCTTCTTGGAAGATTTCTTGATATGG 1640
||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||
Sbjct 1790 TACTTAGCCAGTGCCATCGGTTTCGTGCTCTTGTACTTCTTGGAAGATTTCTTGATATGG 1849
Query 1641 GTCCTTGGGCTGTCGATTTGGCCTTATCTGTTGGAATATAT-CCTTGCGTAG-TGAAGCT 1698
|| | |||||||| ||| ||||||| ||||||||||||| | || | || | |||||||
Sbjct 1850 GTTCATGGGCTGTGGATCTGGCCTTGTCTGTTGGAATAT-TCCCATATGT-GCTGAAGCT 1907
Query 1699 GCTGCAAACAACAACTATTGAGCTACGGCAGATTCTTGTTTTCATATGGACAAAGATCCT 1758
|||||||||||||| | ||||||| | |||||||| |||||||||||||||||||| ||
Sbjct 1908 TCTGCAAACAACAACAAATGAGCTAAGACAGATTCTGGTTTTCATATGGACAAAGATTCT 1967
Query 1759 AGCACTTGATAAGTCCTGTCAAGTTGATCTTGTGAAGGACCGGGGCCACATATATTTCAT 1818
|||||||||||||| |||||| |||||||||||||||| |||| || | |||||||||
Sbjct 1968 TGCACTTGATAAGTCATGTCAAATTGATCTTGTGAAGGATGGGGGGCATACATATTTCAT 2027
Query 1819 TCGATTTTTAGATAGTTCTGATGCATTCCCAGAACAACGTGCTATGGCTGCGTTTATTTT 1878
|||||| ||||||| || | |||||| ||||||||||| ||||||||||| ||| || |
Sbjct 2028 ACGATTTCTAGATAGCTCGGGTGCATTTCCAGAACAACGAGCTATGGCTGCTTTTGTTCT 2087
Query 1879 GGCTGTTATTGTCGATGGCTACA--AACGAGGCCAAGAATCATGTCTTGAAGCTAATTTA 1936
|||||| ||||| ||||| ||| ||||||||| ||| ||||||||||||||||||||
Sbjct 2088 GGCTGTCATTGTTGATGG--ACATCGACGAGGCCAGGAAGCATGTCTTGAAGCTAATTTA 2145
Query 1937 ATTGCTGTTTGTCTGGGGCACCTCGAAGCAACCCA-ACTATGTGATCCACCGCCAGAACC 1995
|||| |||||||||||| ||||| ||||| | ||| || | ||||||||| ||| |||||
Sbjct 2146 ATTGGTGTTTGTCTGGGACACCTTGAAGC-ATCCAGACCAAGTGATCCACAGCCTGAACC 2204
Query 1996 ATTGTTTCTACAATGGCTTTGTCTTTGTCTTGGAAAGTTGTGGGAGGACTATT-TGGAGG 2054
||||||||||||||||||||||||||||||||||||||| ||||| || | || ||||||
Sbjct 2205 ATTGTTTCTACAATGGCTTTGTCTTTGTCTTGGAAAGTTATGGGAAGATT-TTATGGAGG 2263
Query 2055 CCCAGATAATGGGTAGGGAGGCAAATGCTTCTGAGAA-TCTA--A--T-TGCTGGCC-A- 2106
|||| |||||||| |||||||| ||||||| ||| || | | | | |||| || |
Sbjct 2264 CCCAAATAATGGGCAGGGAGGCTAATGCTTTTGAAAAGT-TGGCACCTCTGCTTTCCGAG 2322
Query 2107 CACCAATCTCTTGCAGGTCAGGGCTGCTGCTGTTTTTGCCTTGGGTACCTTACTTGATGT 2166
| |||| | || | |||| ||||||||||||||||||||| |||||||||| |||||| |
Sbjct 2323 CCCCAA-C-CT-G-AGGTAAGGGCTGCTGCTGTTTTTGCCCTGGGTACCTTGCTTGATAT 2378
Query 2167 TGGGTTTGACTCTGGTAAAGGTGTTTGTG-ATGAAGAATTTGATGATGATGAAAATAT-A 2224
||||||||||||| |||| |||| ||| | || |||||||||||||||||||| || |
Sbjct 2379 TGGGTTTGACTCTAATAAAAGTGTG-GTGGAGGATGAATTTGATGATGATGAAAAGATTA 2437
Query 2225 GTT--GAAGATATTATCATAAAAAGTCTCTTAGATGTAGTTTCAGATGGGAGCCCGCTTG 2282
| ||||| |||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct 2438 GAGCCGAAGACGCTATCATTAAAAGTCTCTTAGATGTAGTTTCAGATGGGAGTCCACTTG 2497
Query 2283 TCCGAACAGAGGTTGCTGTAGCTCTCGCACGGTTTGCTTTTGGACACAAACAACATCTAA 2342
||||| |||||||||| |||||||| ||||| ||||| ||||| |||||||| || || |
Sbjct 2498 TCCGAGCAGAGGTTGCCGTAGCTCTTGCACGTTTTGCCTTTGGCCACAAACAGCACCTTA 2557
Query 2343 AGTCAGTTGCAGATTCATACTGGAAGCCCCAAA--A-TTCTCTGCGAACTTCTCTCCCTT 2399
||| || |||| |||||| |||||||| || | |||| ||| |||||||||||||
Sbjct 2558 AGTTAGCCGCAGCTTCATATTGGAAGCCTCAGTCGAGTTCTTTGCTTACTTCTCTCCCTT 2617
Query 2400 CAATGGCCAAGTTTCATGACTC-TGGGACTTCAATAGTTGCTTCTTCAGACATGGGTTCT 2458
|||| || || || ||||| || ||||| | ||| | ||| ||||| | ||||| || ||
Sbjct 2618 CAATAGCTAAATTCCATGA-TCCTGGGAGTGCAACAATTGTTTCTTTACACATGAGTCCT 2676
Query 2459 CTGACTAGAGCTAGCCCTGATAGCCAACCAGTGGCTCGTGAAGGA-AGGATCTCAAGCAG 2517
||||||||| |||| | ||||||||||||||||||||||| || ||||||||||||||
Sbjct 2677 TTGACTAGAGTTAGCACGGATAGCCAACCAGTGGCTCGTGA-GGCTAGGATCTCAAGCAG 2735
Query 2518 CC-TCCAAGAACCTTTTTCCGGGCTAATGCAAGGATCTCCATTAGCTGATGACTCCTCCT 2576
|| || | | | || | ||||| |||||||||||||||||| ||||||| || || |
Sbjct 2736 CCCTCTTGG--C-TCTT-CTGGGCTGATGCAAGGATCTCCATTATCTGATGATTCTTCGT 2791
Query 2577 TGCATTCTGATGT-TGGAATCATCCATGATGGTGTCAGCAATGGAGTTGTCCATCAGCCA 2635
| ||||||||| | |||||| || ||||| ||||||||||||||| ||||||||||||
Sbjct 2792 TACATTCTGAT-TCTGGAATGATGCATGACAGTGTCAGCAATGGAGCGGTCCATCAGCCA 2850
Query 2636 AGACCGCTGGATAATGCTATCTATTCGCAGAGTGTTCTAGCTATGTTTACCTTAGCTAAA 2695
|||| | |||| || ||| | ||||||||| | |||| |||||||||| | |||||||||
Sbjct 2851 AGACTGTTGGACAACGCTGTTTATTCGCAGTGCGTTCGAGCTATGTTTGCATTAGCTAAA 2910
Query 2696 GATCCATCTCCACGTATTGCAAGCCTTGGGCGGCGTGTGCTTTCTGTTATTGGGATTGAA 2755
||||||||||||||||||||||| || || ||||||||||||||| ||||||| || |||
Sbjct 2911 GATCCATCTCCACGTATTGCAAGTCTCGGACGGCGTGTGCTTTCTATTATTGGAATCGAA 2970
Query 2756 CAAATTGTTGCGAAACCCTCCAAGTCCAATGGCCGACCAGGTGAAGCAGCATC-AGCATC 2814
|| |||||||||||||||| ||| ||| |||||||||||| ||||| ||| | | ||||
Sbjct 2971 CAGGTTGTTGCGAAACCCTCGAAGCCCACTGGCCGACCAGGGGAAGCTGCAACGA-CATC 3029
Query 2815 TCACACTCCTCTGGCTGGCCTAGTTCGCTCATCCTCTTGGTTTGACATGCATACAGGCCA 2874
||||||||| || |||||||||| ||| |||||||| |||||||| |||||| |||| |
Sbjct 3030 TCACACTCCACTTGCTGGCCTAGCTCGTTCATCCTCATGGTTTGATATGCATGCAGGTAA 3089
Query 2875 CCTACCGTTAACATTTAGGACTCCTCCGGTAAGCCCTCCGCAA-A-CAAGCTATTTAACT 2932
|| || |||| ||||||||||| ||||| ||||| || ||| | ||| |||| ||| |
Sbjct 3090 TCTGCCCTTAAGTTTTAGGACTCCCCCGGTCAGCCC-CC-CAAGAACAAACTATCTAAGT 3147
Query 2933 GGACTGAGGAGAGTTTGTTCGCTAGAGCTCCGACCTCATCTGCTGGGTTCTCCCGACTCT 2992
|||||||||||||||||||| ||||| || | |||||||| || |||| ||||||||
Sbjct 3148 GGACTGAGGAGAGTTTGTTCATTAGAGTTCAGGCCTCATCTATTGAGTTCACCCGACTCA 3207
Query 2993 GGATTGGCTGATCCGATTTTAGGTGTAAGCGGGTCTGAACGGAGTTTGCTTCCACAATCA 3052
|| |||||||||||| ||||||| || || || |||||||| ||||||||||||| ||||
Sbjct 3208 GGGTTGGCTGATCCGCTTTTAGGCGTCAGTGGATCTGAACGAAGTTTGCTTCCACTATCA 3267
Query 3053 ACTATCTACAACTGGAGCTGTGGTCACTTTTCCAAACCTCTTCTTGGCGGAGCAGATGCT 3112
|||||||| | |||||| ||||| |||||||| ||||| |||||||| || || ||||||
Sbjct 3268 ACTATCTATAGCTGGAGTTGTGGCCACTTTTCTAAACCGCTTCTTGGTGGTGCGGATGCT 3327
Query 3113 AATGAAGAGATAGCAGCCCAAAGAGAAGaaaaa-aaaaaGTTTTCGCTGGAGCATATTGC 3171
| | ||||||| |||||| |||||||||| ||| ||||| || | || |||||||||||
Sbjct 3328 AGTCAAGAGATTGCAGCCAAAAGAGAAGAGAAAGAAAAA-TTCGCACTTGAGCATATTGC 3386
Query 3172 AAAATGCCAGCATTCATCAATAAGCGGGCTCAGCAATATTCCGATTGCTAATTGGGATAC 3231
|||||||||||| || || || ||| ||||| ||||| ||| ||||| || ||||||||
Sbjct 3387 AAAATGCCAGCACTCCTCTATTAGCAAGCTCAACAATAATCCTATTGCCAACTGGGATAC 3446
Query 3232 AAAGTTTGAAACGGGAACAAAGACGGCCCTCCTTCACCCTTTTTCTCCTATTGTAGTTGC 3291
| ||||||||||||||||||||| || ||||||||||| || |||||||||||||||||
Sbjct 3447 GAGGTTTGAAACGGGAACAAAGACAGCACTCCTTCACCCATTCTCTCCTATTGTAGTTGC 3506
Query 3292 TGCCGATGAGAATGAACGGATTAGGGTGTGGAATTACGAGGAAGCAACTCTTCTTAATGG 3351
||| || |||||||||||||| || |||||||| || ||||||||||||||||| |||||
Sbjct 3507 TGCAGACGAGAATGAACGGATCAGAGTGTGGAACTATGAGGAAGCAACTCTTCTCAATGG 3566
Query 3352 CTTTGACAATAACGATTTTCCTGACAAAGGAATTTCAAATCTCTGCCTTGTCAATGAACT 3411
|||||||||| | |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 3567 CTTTGACAATCATGATTTTCCTGACAAAGGAATTTCAAAGCTCTGCCTCGTCAATGAACT 3626
Query 3412 TGATGACTCTCTGCTACTTGTTGCCTCTTGTAATGTTCCAACTCTTTCCAGAGCGTCTTT 3471
||| ||||||| |||||||||||| || | || | | | | | |||
Sbjct 3627 TGACGACTCTCAGCTACTTGTTGCGTC----A-TG--CGA--T-------G-G-GTCG-- 3666
Query 3472 TGCAATCCGTATATGGAAAGACTACGCAACAAAGGGTAGACAAAAACTTGTCACAGGGTT 3531
| |||| ||||||||| |||| ||||| ||||||| |||||| ||||| || |||||
Sbjct 3667 -G---TCCGGATATGGAAAAACTATGCAACTAAGGGTAAACAAAAGCTTGTTACTGGGTT 3722
Query 3532 TTCGTCAATCCAAGGTCAGAAGCCTGGTGCAAGTGGCCTGAACGCTGTCGTGGACTGGCA 3591
||| |||||||| ||||| ||||| |||||| ||| | |||||||||| |||||||||||
Sbjct 3723 TTCTTCAATCCAGGGTCACAAGCCCGGTGCACGTGACTTGAACGCTGTTGTGGACTGGCA 3782
Query 3592 ACAACAGTCAGGTTACCTGTATGTTTCTGGGGAA-TCGTTATCAATCATGGTTTGGGACC 3650
||||||||| ||||||||||||| ||||||||| | || | || ||| |||||||||
Sbjct 3783 ACAACAGTCCGGTTACCTGTATGCTTCTGGGGAGGT-GTCAACAGTCACACTTTGGGACC 3841
Query 3651 TGGATAAAGAACAGCTCGTCAAATCTATGCCCTTTGAATCCGGGTGCAGCGTCACAGCCC 3710
|||| ||||||||||| |||| |||||| |||| |||||| | ||| | || ||||| |
Sbjct 3842 TGGAGAAAGAACAGCTTGTCAGATCTATTCCCTCTGAATCAGAGTGTGGAGTTACAGCAC 3901
Query 3711 TTTCGGCTTCTCAAGTGCATGGGAGTC-AACTTGCTGCTGGTTTTGCGGATGGATCTGTA 3769
|||| ||||||||||| || || || | ||||||||||||||||||| ||||||||| |
Sbjct 3902 TTTCTGCTTCTCAAGTACACGG-AGGCCAACTTGCTGCTGGTTTTGCCGATGGATCTTTG 3960
Query 3770 AGACTCTACGACGTTCGCACACCTGA-CTTTCTTGTGTGCGCCACTCGGCCTCATCAGCG 3828
|||||||| || ||||| ||||||| | ||||| ||||| |||||||||||||||
Sbjct 3961 AGACTCTATGATGTTCGGTCACCTGAACCG-CTTGTCTGCGCGACTCGGCCTCATCAGAA 4019
Query 3829 AGTAGAAAAAGTAGTTGGACTCAGCTTTCAGCCTGGACTCGATCCAGCAAAGATTGTGAG 3888
||| |||| || ||||||||||| ||||| |||||||| ||||| |||||| | |||||
Sbjct 4020 AGTTGAAAGGGTGGTTGGACTCAGTTTTCAACCTGGACTTGATCCCGCAAAGGTGGTGAG 4079
Query 3889 CGCATCACAAGCAGGTGACATTCAGTTTCTGGATCTGAGAAGACCAAAGGAGACATACCT 3948
||||| || || |||||||| |||||||| || || |||| | ||| ||| ||||||||
Sbjct 4080 TGCATCGCAGGCCGGTGACATACAGTTTCTTGACCTTAGAACAACAAGGGACACATACCT 4139
Query 3949 GACTATAGACGCGCATAGAGGATCACTGACAGCATTGGGTGTTCATAGACATGCTCCAAT 4008
||| || || || || || || ||||| || || || | |||||| ||||| ||||||||
Sbjct 4140 GACAATTGATGCACACAGGGGTTCACTCACGGCTTTAGCTGTTCACAGACACGCTCCAAT 4199
Query 4009 CATAGCGAGCGGGTCAGCAAAACAGCTAATAAAAGTGTTCAGCCTTAAAGGAGAGCAACT 4068
|| |||||||| || ||||||||||| || ||||||||||||||| |||| || |||||
Sbjct 4200 AATCGCGAGCGGATCTGCAAAACAGCTCATTAAAGTGTTCAGCCTTCAAGGGGAACAACT 4259
Query 4069 TGGGATCATAAAG-TACCACACTTCCTTCATGGGC-CAACAGATTGGCCCAGTCAGTTGC 4126
|||| || | ||| || | || ||||||| | ||| ||||||| |||| ||||||
Sbjct 4260 AGGGAGAATCC-GCTACTACCCGTCTTTCATGG-CACAAAAGATTGGTTCAGTGAGTTGC 4317
Query 4127 CTCGCCTTTCACCCTTACCAGATGTTGT--TAGCCGCAGGGGCTGCTGGCTCCTTCGTCT 4184
||| | ||||| || |||||| ||| | |||| || || ||||||| ||| |||||||
Sbjct 4318 CTCACATTTCATCCGTACCAG--GTTCTCCTAGCAGCTGGAGCTGCTGACTCATTCGTCT 4375
Query 4185 CCTTATACACCCACCACAAC 4204
|| ||||||||||| |||||
Sbjct 4376 CCATATACACCCACGACAAC 4395
> Ahg486889 jgi|Araly1|486889|fgenesh2_kg.6__23__AT5G01770.1
Length=4299
Score = 2410 bits (1305), Expect = 0.0
Identities = 1525/1633 (93%), Gaps = 7/1633 (0%)
Strand=Plus/Plus
Query 2801 GCAGCATCAGCATCTCACACTCCTCTGGCTGGCCTAGTTCGCTCATCCTCTTGGTTTGAC 2860
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 2669 GCAGCATCAGCATCTCACACTCCTTTGGCTGGCCTAGTTCGCTCATCCTCATGGTTTGAT 2728
Query 2861 ATGCATACAGGCCACCTACCGTTAACATTTAGGACTCCTCCGGTAAGCCCTCCGCAAACA 2920
||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 2729 ATGCATACAGGTCACCTGCCGCTAACATTTAGGACTCCTCCGGTAAGCCCTCCTCAAACA 2788
Query 2921 AGCTATTTAACTGGACTGAGGAGAGTTTGTTCGCTAGAGCTCCGACCTCATCTGCTGGGT 2980
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2789 AGTTATTTAACTGGACTGAGGAGAGTTTGTTCACTAGAGCTCCGACCTCATCTGCTGGGT 2848
Query 2981 TCTCCCGACTCTGGATTGGCTGATCCGATTTTAGGTGTAAGCGGGTCTGAACGGAGTTTG 3040
||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 2849 TCTCCAGACTCTGGATTGGCTGATCCGCTTTTAGGCGTAAGCGGGTCTGAACGGAGTTTG 2908
Query 3041 CTTCCACAATCAACTATCTACAACTGGAGCTGTGGTCACTTTTCCAAACCTCTTCTTGGC 3100
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 2909 CTTCCACAATCAACTATCTACAACTGGAGCTGTGGTTACTTTTCTAAACCTCTTCTTGGT 2968
Query 3101 GGAGCAGATGCTAATGAAGAGATAGCAGCCCAAAGAGAAGaaaaaaaaaaGTTTTCGCTG 3160
||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||
Sbjct 2969 GGAGCAGATGCTAATGAAGAGATAGTAGGCCAAAGAGAAGAGAAAGAAAAGTTTTCGCTT 3028
Query 3161 GAGCATATTGCAAAATGCCAGCATTCATCAATAAGCGGGCTCAGCAATATTCCGATTGCT 3220
|||| ||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||
Sbjct 3029 GAGCGTATTGCAAAATGCCAGCATTCATCAATCAGCGGGATCAACAATATTCCTATTGCT 3088
Query 3221 AATTGGGATACAAAGTTTGAAACGGGAACAAAGACGGCCCTCCTTCACCCTTTTTCTCCT 3280
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3089 AATTGGGATACAAAGTTTGAAACGGGAACAAAGATGGCCCTCCTTCACCCTTTTTCTCCT 3148
Query 3281 ATTGTAGTTGCTGCCGATGAGAATGAACGGATTAGGGTGTGGAATTACGAGGAAGCAACT 3340
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 3149 ATTGTAGTTGCTGCCGATGAGAATGAACGGATCAGAGTGTGGAATTACGAGGAAGCAACT 3208
Query 3341 CTTCTTAATGGCTTTGACAATAACGATTTTCCTGACAAAGGAATTTCAAATCTCTGCCTT 3400
||||||||||||||||| ||| |||||||||| || |||||||||||||| |||||| ||
Sbjct 3209 CTTCTTAATGGCTTTGATAATCACGATTTTCCCGAGAAAGGAATTTCAAAGCTCTGCTTT 3268
Query 3401 GTCAATGAACTTGATGACTCTCTGCTACTTGTTGCCTCTTGTAATGTTCCAACTCTTTCC 3460
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||
Sbjct 3269 GTCAATGAACTTGATGACTCTCTGCTACTTGTTGCCTCATGTGATGTTCCAACTCTTGCC 3328
Query 3461 AGAGCGTCTTTTGCAATCCGTATATGGAAAGACTACGCAACAAAGGGTAGACAAAAACTT 3520
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3329 AGAGTGTCTTTTGCAATCCGTATATGGAAAGACTACGCAACAAAGGGTAGACAAAAACTT 3388
Query 3521 GTCACAGGGTTTTCGTCAATCCAAGGTCAGAAGCCTGGTGCAAGTGGCCTGAACGCTGTC 3580
|||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 3389 GTCACAGGGTTTTCTTCAATCCAAGGTCACAAGCCTGGTGCACGTGGCCTGAACGCTGTC 3448
Query 3581 GTGGACTGGCAACAACAGTCAGGTTACCTGTATGTTTCTGGGGAATCGTTATCAATCATG 3640
|||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||
Sbjct 3449 GTGGACTGGCAACAGCAATCGGGTTACCTGTATGTTTCTGGGGAATCGTCATCAATCATG 3508
Query 3641 GTTTGGGACCTGGATAAAGAACAGCTCGTCAAATCTATGCCCTTTGAATCCGGGTGCAGC 3700
||||||||||||| | ||||||||||||||||||| |||||| |||||| | |||||||
Sbjct 3509 CTTTGGGACCTGGAGAGAGAACAGCTCGTCAAATCTGTGCCCTCTGAATCAGAGTGCAGC 3568
Query 3701 GTCACAGCCCTTTCGGCTTCTCAAGTGCATGGGAGTCAACTTGCTGCTGGTTTTGCGGAT 3760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3569 GTCACAGCCCTTTCGGCTTCTCAAGTGCATGGGAGTCAACTTGCTGCTGGTTTTGCGGAT 3628
Query 3761 GGATCTGTAAGACTCTACGACGTTCGCACACCTGACTTTCTTGTGTGCGCCACTCGGCCT 3820
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct 3629 GGATCTGTAAGACTCTACGACGTTCGGACACCTGACTTGCTTGTGTGTGCCACTCGGCCT 3688
Query 3821 CATCAGCGAGTAGAAAAAGTAGTTGGACTCAGCTTTCAGCCTGGACTCGATCCAGCAAAG 3880
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3689 CATCAGAGAGTAGAAAAAGTAGTTGGACTCAGCTTTCAGCCTGGACTCGATCCGGCAAAG 3748
Query 3881 ATTGTGAGCGCATCACAAGCAGGTGACATTCAGTTTCTGGATCTGAGAAGACCAAAGGAG 3940
||||||||||||||||||||||||||||||||||||||||| || | || | ||||| ||
Sbjct 3749 ATTGTGAGCGCATCACAAGCAGGTGACATTCAGTTTCTGGACCTAAAAATAACAAAGAAG 3808
Query 3941 ACATACCTGACTATAGACGCGCATAGAGGATCACTGACAGCATTGGGTGTTCATAGACAT 4000
|||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 3809 ACATACCTAACGATAGACGCGCACCGAGGATCACTGACAGCATTGGGTGTCCATAGACAC 3868
Query 4001 GCTCCAATCATAGCGAGCGGGTCAGCAAAACAGCTAATAAAAGTGTTCAGCCTTAAAGGA 4060
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 3869 GCTCCAATCATAGCGAGCGGGTCAGCCAAACAGCTAATAAAAGTGTTCAGCCTTAAGGGA 3928
Query 4061 GAGCAACTTGGGATCATAAAGTACCACACTTCCTTCATGGGCCAACAGATTGGCCCAGTC 4120
|| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 3929 GAACAACTTGGGATCATAAAGTACCACACTTCCTTCATGGCCCAAAAGATTGGCCCAGTC 3988
Query 4121 AGTTGCCTCGCCTTTCACCCTTACCAGATGTTGTTAGCCGCAGGGGCTGCTGGCTCCTTC 4180
||||||||||||||||||||||||||| | ||| |||| || || |||||||||||||||
Sbjct 3989 AGTTGCCTCGCCTTTCACCCTTACCAGGTATTGCTAGCTGCCGGAGCTGCTGGCTCCTTC 4048
Query 4181 GTCTCCTTATACACCCACCACAACACACAATTACCAAGATAGATCATGACAACTAGTAAG 4240
||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||
Sbjct 4049 GTCTCTTTATACACCCACCACAACACGCAACCACCTAGATAGATCATGACAACTAGTAAG 4108
Query 4241 TTAATCAAATGCAAAGTGAATAT-GG-AGTTGGGGTAAAATTAGGTGTTATTTATAGAAT 4298
||| | || |||||| ||||| | || ||||||||||||||| ||| |||||| |||| |
Sbjct 4109 TTAGTGAA-TGCAAAATGAATTTAGGGAGTTGGGGTAAAATTGGGTATTATTTGTAGAGT 4167
Query 4299 TGATTAACTAGCCTCCGATGAGAAGATCCAAGCAAAACTAATTGAGGAGGCTTTGCCAAA 4358
||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct 4168 TGATTAATTAGCCTCCGATGAAAAGATGCAAGCAATACTAATTGAGGAGGCTTTGCCAAA 4227
Query 4359 TAGAATTTACGCATGTAAATGCTTTGTAAATAGTA---GTCATTCTGTGTCAACTTCAAC 4415
|| ||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||
Sbjct 4228 TA-AATTTACGCATATAAATGCTTTGTAAATAGTTCTTGTCATTCTCTGTCAACTTTAAC 4286
Query 4416 TATTTATTCCTTA 4428
|||||||||||||
Sbjct 4287 TATTTATTCCTTA 4299
Score = 1458 bits (789), Expect = 0.0
Identities = 1050/1168 (90%), Gaps = 49/1168 (4%)
Strand=Plus/Plus
Query 207 TTTGGATGGCATTAGGGGACTTGATGGTCTCCAGGCTCTCTCAATCTTCCGTTACTGTTG 266
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 93 TTTGGATGGCATTAGGGGACTCGATGGTCTCCAGGCTCTCTCAATCTTCCGTTACCGTTG 152
Query 267 TCACCAATCACCTCTACGACGACGACGACAACTGCGCCTCCTCCGCTCACGATGATTCCC 326
|||||||||||| |||| | |||||||| |||||| ||||| |||||||||||||||
Sbjct 153 TCACCAATCACCGCTAC-A--ACGACGACGACTGCG---CCTCCACTCACGATGATTCCC 206
Query 327 GTGTGTCCATCATCGCCTCT--CCC-AG-------AGTC-----GCAAGTAGCAGCTATG 371
| ||||||||||||||||| ||| || | || || || ||||||||||
Sbjct 207 GCATGTCCATCATCGCCTCTCCCCCAAGCATTTACAATCATTTTGCTAGCAGCAGCTATG 266
Query 372 AGAACCTCTCCGCCGCCACAAGCATGGCATACTTGCCTCAGACTCTTGTGCTCTGTGACC 431
|||| |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 267 AGAATCTCTCCTCCGCCACAAGCATGGCATACTTGCCTCAGACTGTTGTGCTCTGCGACC 326
Query 432 TTAGACACGA------CGACGCATCCGACATCGTCC-AACCCCCAAGATGGCGCCTTAAA 484
|||||||||| ||| || | |||||||||| | ||||| |||||||||||||||
Sbjct 327 TTAGACACGAGGCCTCCGAGGCCTTAGACATCGTCCGATCCCCC-AGATGGCGCCTTAAA 385
Query 485 GAGCGAATGAAAACAGGATGTGTTGCTCTAGTTATGTGTTTGCACATTACTGTTGATCCC 544
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 386 GAGCGAATGAAAACAGGATGTGTAGCTCTAGTTATGTGTTTGCACATTAGTGTTGATCCC 445
Query 545 CCTGATGTTATTAAGATTTCTCCCTGCGCAAGACTCGAATGCTGGATAGATCCTTTTTCT 604
||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||||||||||
Sbjct 446 CCTGATGTTATTAAGATCTCTCCATGCGCCACACTGGAATGCTGGATAGATCCTTTTTCT 505
Query 605 ATGTTTCCCCCAAGAAGAGCTCTTGAGGCTATTGGCCAAAACTTGAGCATTCAGTACGAG 664
|| | ||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct 506 ATCTATCCACCAAGAAGAGCTCTTGAGACTATAGGCCAAAGCTTGAGCATTCAGTACGAG 565
Query 665 AGATGGCTGGCTCGGGCTCGATATAAAGTCGAATTGGATCCTACAAAGGACGATGTCAGG 724
||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 566 AGATGGCTGCCTCGGGCTCGATATAAGGTGGAACTGGATCCTACAAAGGACGATGTCAGG 625
Query 725 AAGCTCTGCTTGTCTTGCCGGAAATA-TGCAAAGACTGAGAGAGTTTTGTTTCACTATAA 783
||||| |||||||||||||||||| | ||| ||||||||| ||||||||||||| |||||
Sbjct 626 AAGCTGTGCTTGTCTTGCCGGAAA-ACTGCTAAGACTGAGCGAGTTTTGTTTCATTATAA 684
Query 784 CGGGCATGGTGTCCCTAAACCTACACCTAATGGTGAAATCTGGGTTTACAATAAGAATTT 843
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 CGGCCATGGTGTCCCCAAACCTACACCTAATGGTGAAATCTGGGTTTACAATAAGAATTT 744
Query 844 TACGCAGTACATTCCCTTGCCAGTCAGCGAGCTTGATTCCTGGTTGAAAACACCCACCAT 903
|||||||||||||||||||||||||||| | ||||||||||||||||| |||||| | ||
Sbjct 745 TACGCAGTACATTCCCTTGCCAGTCAGCCAACTTGATTCCTGGTTGAAGACACCCGCAAT 804
Query 904 TTACGTTTTTGACTGCTCTGCTGCTAGGGTGATCCTCAATGCCTTCGCCGAG------G- 956
||| |||||||||||||||||||||||| | | ||||||||||||| ||| |
Sbjct 805 TTATGTTTTTGACTGCTCTGCTGCTAGGCTCCTTGTCAATGCCTTCGCTGAGCTTCATGT 864
Query 957 -GGG-AATCTTCTGGA-C--C----CCC--GAAGGACTGTATTCTACTGGCTGCTTGTGA 1005
||| |||||||||| | | ||| ||| ||||| ||||||||||||||||||||
Sbjct 865 TGGGGAATCTTCTGGCTCGTCTGGGCCCCCGAAAGACTGCATTCTACTGGCTGCTTGTGA 924
Query 1006 TGTACATGAGACACTTCCTCAGAGTGTTGAATTTCCAGCTGACGTTTTTACTTCTTGCCT 1065
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 925 TGTACATGAGACACTTCCTCAGAGTGTTGAATTTCCAGCTGACGTGTTTACTTCTTGCCT 984
Query 1066 CACAACACCTATTAATATCGCATTGAAATGGTTCTGCAGACGTTCTCTTCTGAAAGAATT 1125
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 985 TACCACACCTATTAAGATCGCATTGAAATGGTTCTGCAGACGTTCTCTTCTGAAGGAATT 1044
Query 1126 TATAGATGAATCACTTATTGATAGAATTCCCGGTCGCCAAAATGACCGTAAAACATTGTT 1185
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1045 TATAGATGAATCACTTATTGATAGAATTCCCGGCCGCCAAAATGACCGCAAAACATTGTT 1104
Query 1186 AGGAGAGTTGAACTGGATCTTCACTGCAGTCACAGACACCATTGCCTGGAATGTGCTTCC 1245
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1105 AGGAGAGTTGAACTGGATCTTTACTGCAGTCACGGACACCATTGCCTGGAATGTGCTTCC 1164
Query 1246 ACGCGAACTTTTCCAGAGATTATTCAGACAGGACTTGTTGGTTGCTAGCCTTTTCCGAAA 1305
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1165 TCGCGAACTTTTCCAGAGATTATTCAGACAGGACTTGTTGGTTGCTAGCCTTTTCCGGAA 1224
Query 1306 TTTCTTACTAGCTGAGAGGATAATGCGG 1333
||||||||| ||||||||||||||||||
Sbjct 1225 TTTCTTACTTGCTGAGAGGATAATGCGG 1252
Score = 977 bits (529), Expect = 0.0
Identities = 606/643 (94%), Gaps = 5/643 (1%)
Strand=Plus/Plus
Query 2128 GGCTGCTGCTGTTTTTGCCTTGGGTACCTTACTTGATGTTGGGTTTGACTCTGGTAAAGG 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2029 GGCTGCTGCTGTTTTTGCCTTGGGTACCTTACTTGATGTTGGGTTTGACTCTGGTAAAGG 2088
Query 2188 TGTTTGTGATGAAGAATTTGATGATGATGAAAATAT-AG--TTGAAGATATTATCATAAA 2244
|||| |||| |||||||||||||||||||||||||| | ||||||||||||| |||||
Sbjct 2089 TGTTCGTGACGAAGAATTTGATGATGATGAAAATATTATAATTGAAGATATTATGATAAA 2148
Query 2245 AAGTCTCTTAGATGTAGTTTCAGATGGGAGCCCGCTTGTCCGAACAGAGGTTGCTGTAGC 2304
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 2149 AAGTCTCTTAGATGTAGTTTCAGATGGGAGCCCGCTTGTCCGAGCAGAAGTTGCTGTAGC 2208
Query 2305 TCTCGCACGGTTTGCTTTTGGACACAAACAACATCTAAAGTCAGTTGCAGATTCATACTG 2364
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 2209 TCTCGCACGGTTTGCCTTTGGACACAAACAACATCTAAAGTCAGTTGCAGCTTCATATTG 2268
Query 2365 GAAGCCCCAAAATTCTCTGCGAACTTCTCTCCCTTCAATGGCCAAGTTTCATGACTCTGG 2424
||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct 2269 GAAGCCCCAAAGTTCTCTGCGAACTTCTTTCCCTTCAATGGCCAAGTTTCACGACGCTGG 2328
Query 2425 GACTTCAATAGTTGCTTCTTCAGACATGGGTTCTCTGACTAGAGCTAGCCCTGATAGCCA 2484
||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2329 AACTTCAACAATTGTTTCTTCACACATGGGTTCTCTGACTAGAGCTAGCCCTGATAGCCA 2388
Query 2485 ACCAGTGGCTCGTGAAGGAAGGATCTCAAGCAGCCTCCAAGAACCTTTTTCCGGGCTAAT 2544
|||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||| |||
Sbjct 2389 ACCAGTGGCTCGTGAAGGGAGGATCTCAAGCAGCCTCCATGAAGCTTCTTCCGGGCCAAT 2448
Query 2545 GCAAGGATCTCCATTAGCTGATGACTCCTCCTTGCATTCTGATGT-TGGAATCATCCATG 2603
|||||||||||||||| ||||||| || ||||||||||||||| | ||||||||||||||
Sbjct 2449 GCAAGGATCTCCATTATCTGATGATTCTTCCTTGCATTCTGAT-TCTGGAATCATCCATG 2507
Query 2604 ATGGTGTCAGCAATGGAGTTGTCCATCAGCCAAGACCGCTGGATAATGCTATCTATTCGC 2663
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2508 ATGGTGTCAACAATGGAGTTGTCCATCAGCCAAGACCGCTGGATAATGCTATCTATTCGC 2567
Query 2664 AGAGTGTTCTAGCTATGTTTACCTTAGCTAAAGATCCATCTCCACGTATTGCAAGCCTTG 2723
|| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2568 AGTGTGTTCTGGCTATGTTTACGTTAGCTAAAGATCCATCTCCACGTATTGCAAGCCTTG 2627
Query 2724 GGCGGCGTGTGCTTTCTGTTATTGGGATTGAACAAATTGTTGC 2766
||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2628 GGCGGCGTGTGCTATCTGTTCTTGGGATTGAACAAATTGTTGC 2670
Score = 815 bits (441), Expect = 0.0
Identities = 495/521 (95%), Gaps = 4/521 (1%)
Strand=Plus/Plus
Query 1573 TCAGGTCTTACTTAGCCAGTGCCATCGGTATCGTGCTCTGGTGCTTCTTGGAAGATTTCT 1632
||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||
Sbjct 1510 TCAGGTCTTACTTAGCCAGTGCCATCGGTTTCGTGCTCTTGTACTTCTTGGACGATTTCT 1569
Query 1633 TGATATGGGTCCTTGGGCTGTCGATTTGGCCTTATCTGTTGGAATATATCCTTGCGTAGT 1692
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1570 TGATATGGGTCCTTGGGCTGTCGATTTGGCCTTATCCGTTGGAATATATCCTTGCGTAGT 1629
Query 1693 GAAGCTGCTGCAAAC-AACAACTATTGAGCTACGGCAGATTCTTGTTTTCATATGGACAA 1751
|||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1630 AAAGCTGCTGC-AGCAAACAACTATTGAGCTACGGCAGATTCTTGTTTTCATATGGACAA 1688
Query 1752 AGATCCTAGCACTTGATAAGTCCTGTCAAGTTGATCTTGTGAAGGACCGGGGCCACATAT 1811
|||| || ||| |||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1689 AGATTCTTGCATTTGATAAGTCATGTCAAGTAGATCTTGTGAAGGACCGGGGCCACATAT 1748
Query 1812 ATTTCATTCGATTTTTAGATAGTTCTGATGCATTCCCAGAACAACGTGCTATGGCTGCGT 1871
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1749 ATTTCATCCGATTTTTAGATAGTTCTGATGCATTCCCAGAACAACGTGCTATGGCTGTGT 1808
Query 1872 TTATTTTGGCTGTTATTGTCGATGGCTACAAACGAGGCCAAGAATCATGTCTTGAAGCTA 1931
|| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1809 TTGTTTTGGCTGTTATTGTCGATGGCTACAAACAAGGCCAAGAATCTTGTCTTGAAGCTA 1868
Query 1932 ATTTAATTGCTGTTTGTCTGGGGCACCTCGAAGCAACCCAACTATGTGATCCACCGCCAG 1991
||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1869 ATTTAATTGGTGTTTGTCTGGGCCACCTCGAAGCAACCCAACCATGTGATCCACCGCCAG 1928
Query 1992 AACCATTGTTTCTACAATGGCTTTGTCTTTGTCTTGGAAAGTTGTGGGAGGACTATT-TG 2050
||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1929 AACCATTGTTTCTTCAATGGCTTTGTCTTTGTCTTGGAAAGTTGTGGGAGGACT-TTGTG 1987
Query 2051 GAGGCCCAGATAATGGGTAGGGAGGCAAATGCTTCTGAGAA 2091
||||||||||||||||||| |||||||||||||||||||||
Sbjct 1988 GAGGCCCAGATAATGGGTAAGGAGGCAAATGCTTCTGAGAA 2028
Score = 267 bits (144), Expect = 7e-70
Identities = 161/169 (95%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 1391 ATGTGGGATGCATGGGACATGGCTGCTGAAATCTGCCTTTCTCAGCTTCCTCAATTTTTT 1450
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1247 ATGCGGGATGCATGGGACATGGCTGCTGAAATCTGCCTTTCTCAGCTTCCTAAACTTTTT 1306
Query 1451 CTGGACCCAAATACGGAGTTTCAGCCAAGT-TCATTTTTCACTGAGCAACTGACAGCTTT 1509
|||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||
Sbjct 1307 CTGGACCCAAATACGGAGTTTCAGCCAAGTCT-ATTTTTTACTGAGCAACTGACAGCTTT 1365
Query 1510 TGAGGTCTGGCTGGATCATGGATCTGAGCATAAGAAGCCACCAGAGCAG 1558
|||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1366 TGAGGTCTGGCTTGATCATGGATCTGAGCATAAGAAGCCACCGGAGCAG 1414
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 168252530233
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5