BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G02500.1
Length=2374
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487029 jgi|Araly1|487029|fgenesh2_kg.6__163__AT5G02500.1 3570 0.0
Ahg892159 jgi|Araly1|892159|Al_scaffold_0006_155 2244 0.0
Ahg928617 jgi|Araly1|928617|scaffold_301074.1 1903 0.0
Ahg314911 jgi|Araly1|314911|fgenesh1_pm.C_scaffold_1003691 1899 0.0
> Ahg487029 jgi|Araly1|487029|fgenesh2_kg.6__163__AT5G02500.1
Length=2253
Score = 3570 bits (1933), Expect = 0.0
Identities = 2155/2262 (95%), Gaps = 15/2262 (1%)
Strand=Plus/Plus
Query 1 GCTTACCAAATACAAACCCTAGCCGCCTTATTCGTCTTCTTCGTTCTCTAGT-TTTTTCC 59
||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| |
Sbjct 1 GCTTACCAAATACAAACCCTAGCCGCCCTATTCGTCTTCTTCGTTCTCTATTCTTTTTTC 60
Query 60 TCAGTCTCTGTTCTTAGATCCCTTGTAGTTTCCAAATCTTCCGAT-AAAAATGTCGGGTA 118
|||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||
Sbjct 61 TCAGTCTCTGTTCTTAGATCTCTTGTAG-CTCCAAATCTTCCGATAAAAAATGTCGGGTA 119
Query 119 AAGGAGAAGGACCAGCTATCGGTATCGATCTTGGTACCACTTACTCTTGCGTCGGAGTAT 178
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 120 AAGGAGAAGGACCAGCTATCGGTATCGATCTTGGTACTACCTACTCTTGCGTCGGAGTAT 179
Query 179 GGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGAAACAGAACCACGCCATCTT 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 180 GGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGAAACAGAACCACTCCGTCTT 239
Query 239 ACGTTGCTTTCACCGACTCCGAGAGGTTGATCGGTGACGCAGCTAAGAATCAGGTCGCCA 298
|||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct 240 ACGTAGCTTTCACCGACTCCGAGAGGTTGATCGGTGATGCCGCTAAGAACCAGGTCGCCA 299
Query 299 TGAACCCCGTTAACACCGTTTTCGACGCTAAGAGGTTGATCGGTCGTCGTTTCTCTGACA 358
||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 300 TGAACCCTGTTAACACCGTTTTCGATGCAAAGAGGTTGATCGGTCGTCGTTTCTCTGACA 359
Query 359 GCTCTGTTCAGAGTGACATGAAATTGTGGCCATTCAAGATTCAAGCC-GGACCTGCCGAT 417
||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 360 GCTCTGTCCAGAGTGACATGAAATTGTGGCCATTCAAGATTCAA-CCAGGACCTGCCGAC 418
Query 418 AAGCCAATGATCTACGTCGAATACAAGGGTGAAGAGAAAGA-GTTCGCAGCTGAGGAGAT 476
|||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||
Sbjct 419 AAGCCAATGATCTACGTCGAATACAAGGGTGAAGAG-AAGATGTTCGCCGCTGAGGAGAT 477
Query 477 TTCTTCCATGGTTCTTATTAAGATGCGTGAGATTGCTGAGGCTTACCTTGGTGTCACAAT 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 478 CTCTTCCATGGTTCTTATTAAGATGCGTGAGATTGCTGAGGCTTACCTTGGTGTCTCTAT 537
Query 537 CAAGAACGCCGTTGTTACCGTTCCAGCTTACTTCAACGACTCTCAGCGTCAGGCTACAAA 596
||||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||||
Sbjct 538 CAAGAACGCTGTTGTCACCGTTCCTGCTTACTTCAACGACTCTCAGCGTCAAGCCACAAA 597
Query 597 GGATGCTGGTGTCATCGCTGGTTTGAACGTTATGCGAATCATCAACGAGCCTACAGCCGC 656
||||||||| || || ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 598 GGATGCTGGAGTTATTGCTGGTTTGAACGTTATGCGAATCATCAACGAGCCCACAGCTGC 657
Query 657 CGCTATTGCCTACGGTCTTGACAAAAAGGCTACCAGCGTTGGAGAGAAGAATGTTCTTAT 716
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 658 CGCTATTGCCTACGGTCTTGACAAGAAGGCAACCAGCGTTGGAGAGAAGAATGTTCTTAT 717
Query 717 CTTCGATCTTGGTGGTGGCACTTTTGATGTCTCTCTTCTTACCATTGAAGAGGGTATCTT 776
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 718 CTTCGATCTTGGTGGTGGTACATTTGATGTCTCTCTTCTTACCATTGAAGAGGGTATCTT 777
Query 777 TGAGGTGAAGGCAACTGCTGGTGACACCCATCTTGGTGGGGAAGATTTTGACAACAGAAT 836
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 778 TGAGGTGAAGGCAACTGCTGGAGACACCCATCTTGGTGGGGAAGATTTTGACAACAGAAT 837
Query 837 GGTTAACCACTTTGTCCAAGAGTTCAAGAGGAAGAGTAAGAAGGATATCACCGGTAACCC 896
|||||||||||| || |||||||||||||||||||| |||||||| || |||||||||||
Sbjct 838 GGTTAACCACTTCGTTCAAGAGTTCAAGAGGAAGAGCAAGAAGGACATTACCGGTAACCC 897
Query 897 AAGAGCTCTTAGGAGGTTGAGAACTTCCTGTGAGAGAGCGAAGAGGACTCTTTCTTCCAC 956
||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||
Sbjct 898 AAGAGCTCTTAGGAGGTTGAGAACTGCCTGTGAGAGAGCAAAGAGGACCCTTTCCTCCAC 957
Query 957 TGCTCAGACCACCATCGAGATTGACTCTCTATACGAGGGTATCGACTTCTACTCCACCAT 1016
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 958 TGCTCAGACCACTATCGAGATTGACTCTCTATACGAGGGTATTGACTTCTACTCCACCAT 1017
Query 1017 CACCCGTGCTAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAGCCAGT 1076
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CACCCGTGCTAGATTCGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAGCCAGT 1077
Query 1077 TGAGAAGTGTCTTCGTGATGCTAAGATGGACAAGAGCACTGTTCATGATGTTGTCCTTGT 1136
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1078 TGAGAAGTGTCTCCGTGATGCTAAGATGGACAAGAGCACTGTTCACGATGTTGTCCTTGT 1137
Query 1137 TGGTGGTTCTACCCGTATCCCTAAGGTTCAGCAATTGCTCCAGGACTTCTTCAACGGCAA 1196
||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1138 TGGTGGTTCCACACGTATTCCTAAGGTTCAGCAATTGCTTCAGGACTTCTTCAACGGCAA 1197
Query 1197 AGAGCTTTGCAAGTCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAGGG 1256
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1198 AGAGCTTTGCAAGTCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCGGTCCAGGG 1257
Query 1257 AGCTATTCTCAGCGGTGAAGGAAACGAGAAGGTTCAAGATCTTCTATTGCTCGATGTCAC 1316
|||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 1258 AGCTATTCTCAGTGGTGAAGGAAACGAGAAGGTCCAAGATCTTCTGTTGCTCGATGTTAC 1317
Query 1317 TCCTCTCTCCCTTGGTTTGGAAACTGCCGGTGGTGTCATGACCACTTTGATCCCAAGGAA 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1318 TCCTCTCTCCCTTGGTTTGGAAACTGCCGGTGGTGTCATGACCACTTTGATCCCAAGAAA 1377
Query 1377 CACAACCATCCCAACCAAGAAGGAACAAGTCTTCTCCACCTACTCAGACAACCAACCCGG 1436
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1378 CACAACCATCCCAACCAAGAAGGAACAGGTCTTCTCCACCTACTCAGACAACCAACCTGG 1437
Query 1437 TGTGTTGATCCAGGTGTACGAAGGAGAGAGAGCCAGAACCAAGGACAACAACCTTCTTGG 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1438 TGTGTTGATCCAGGTGTACGAAGGAGAGAGAGCCAGAACCAAGGACAACAACCTTCTCGG 1497
Query 1497 TAAATTTGAGCTCTCCGGAATTCCTCCAGCTCCTCGTGGTGTCCCCCAGATCACAGTCTG 1556
|||||| |||||||||||||| ||||| |||||||||||||| || ||||||||||||||
Sbjct 1498 TAAATTCGAGCTCTCCGGAATCCCTCCGGCTCCTCGTGGTGTACCTCAGATCACAGTCTG 1557
Query 1557 CTTTGACATTGATGCCAATGGTATCCTCAATGTCTCTGCTGAGGACAAGACCACCGGACA 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 CTTTGACATTGATGCCAATGGTATCCTCAATGTCTCTGCTGAGGACAAGACCACCGGACA 1617
Query 1617 GAAGAACAAGATCACCATCACCAATGACAAGGGTCGTCTCTCCAAGGATGAGATTGAGAA 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 GAAGAACAAGATCACCATCACCAATGACAAGGGTCGTCTCTCCAAGGATGAGATTGAGAA 1677
Query 1677 GATGGTTCAAGAGGCTGAGAAGTACAAGTCCGAAGACGAGGAGCACAAGAAGAAGGTTGA 1736
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1678 GATGGTTCAAGAGGCTGAGAAGTACAAGTCTGAAGACGAGGAGCACAAGAAGAAGGTTGA 1737
Query 1737 AGCCAAGAACGCTCTCGAGAACTACGCTTACAACATGAGGAACACCATCCAAGACGAGAA 1796
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 AGCCAAGAACGCTCTTGAGAACTACGCTTACAACATGAGGAACACCATCCAAGACGAGAA 1797
Query 1797 GATTGGTGAGAAGCTCCCGGCTGCAGACAAGAAGAAGATCGAGGATTCTATTGAGCAGGC 1856
|||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||
Sbjct 1798 GATTGGTGAGAAGCTCCCCGCAGCAGACAAGAAGAAGATCGAGGACTCAATTGAGCAGGC 1857
Query 1857 GATTCAATGGCTCGAGGGTAACCAGTTGGCTGAGGCTGATGAGTTCGAAGACAAGATGAA 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 GATTCAATGGCTCGAGGGTAACCAGTTGGCTGAGGCTGATGAGTTCGAAGACAAGATGAA 1917
Query 1917 GGAATTGGAGAGCATCTGCAACCCAATCATTGCCAAGATGTACCAAGGAGCTGGTGGTGA 1976
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1918 GGAATTGGAGAGCATCTGCAACCCAATCATCGCTAAGATGTACCAAGGAGCTGGTGGTGA 1977
Query 1977 AGCCGGTGGTCCAGGTGCCTCTGGTATGGACGATGATGCTCCCCCTGCTTCAGGCGGTGC 2036
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1978 AGCCGGT---CCAGGTGCCTCTGGTATGGACGATGATGCTCCTCCTGCTTCAGGCGGTGC 2034
Query 2037 TGGACCTAAGATCGAGGAGGTCGACTAATTTGTTGGACATTGACCTCTCTCTTTCTCCTA 2096
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 2035 TGGACCTAAGATCGAGGAGGTCGACTAATCTGTTGGACCTTGACCTCTCTCTTTCTCCTA 2094
Query 2097 TCTCTATCTCTTTTACTTGCttttttttgatctgttaagactttttatgttgggcttttt 2156
||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||
Sbjct 2095 TCTCTATCT-TTTTACTTGCTTATTTTGGATCTCTTAAGACTTTTTATGTTGGGCTTTTT 2153
Query 2157 taaagaagcccattttgtggtgttttttggttagtactattttgAACAATGGTTGGTTCT 2216
||| | ||||||||||||||||||||| |||||||||| ||||||||||||| || || |
Sbjct 2154 TAATGGAGCCCATTTTGTGGTGTTTTTGGGTTAGTACTTTTTTGAACAATGGCTGATT-T 2212
Query 2217 -ATACC-AGTTTAGCTACGATGACGGATAAAATTAAAAGTTT 2256
| ||| || | ||||||||||||||||||||||||||||||
Sbjct 2213 GA-ACCCAGCTCAGCTACGATGACGGATAAAATTAAAAGTTT 2253
> Ahg892159 jgi|Araly1|892159|Al_scaffold_0006_155
Length=1962
Score = 2244 bits (1215), Expect = 0.0
Identities = 1720/1966 (87%), Gaps = 26/1966 (1%)
Strand=Plus/Plus
Query 115 GGTAAAGGAGAAGGACCAGCTATCGGTATCGATCTTGGTACCACTTACTCTTGCGTCGGA 174
|||||||||||||| || || |||||||||||||||||||| || |||||||||||||||
Sbjct 7 GGTAAAGGAGAAGGTCCTGCGATCGGTATCGATCTTGGTACGACGTACTCTTGCGTCGGA 66
Query 175 GTATGGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGAAACAGAACCACGCCA 234
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 67 GTATGGCAACACGACCGTGTTGAGATCATCGCTAATGATCAAGGAAACAGAACCACTCCG 126
Query 235 TCTTACGTTGCTTTCACCGACTCCGAGAGGTTGATCGGTGACGCAGCTAAGAATCAGGTC 294
|| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct 127 TCGTACGTTGCTTTCACCGACTCCGAGAGGTTGATCGGTGATGCTGCTAAGAACCAGGTC 186
Query 295 GCCATGAACCCCGTTAACACCGTTTTCGACGCTAAGAGGTTGATCGGTCGTCGTTTCTCT 354
|| |||||||| |||||||| |||||||| || ||||||||||| |||||| | | | |
Sbjct 187 GCTATGAACCCGGTTAACACTGTTTTCGATGCAAAGAGGTTGATTGGTCGTAGATACAGT 246
Query 355 GACAGC-TCTGTTCAGAGTGACATGAAA-TTGTGGCCATTCAAGATTCAAG-CCGGACCT 411
||| || ||||| || ||||||| || | || ||||| |||||||| || ||||| ||
Sbjct 247 GAC-GCATCTGTCCAAAGTGACA-GACAGTTATGGCCTTTCAAGAT-CATCTCCGGAACT 303
Query 412 GCCGATAAGCCAATGATC-TACGTCGAATACAAGGGTGAAGAGAAAGAGTTCGCAGCTGA 470
|| || || |||||||| | ||||||||||||||| ||||||||| | ||||| |||||
Sbjct 304 GCAGAGAAACCAATGATTGT-CGTCGAATACAAGGGAGAAGAGAAACAATTCGCTGCTGA 362
Query 471 GGAGATTTCTTCCATGGTTCTTATTAAGATGCGTGAGATTGCTGAGGCTTACCTTGGTG- 529
|| || |||||||||||||||||||||||||||||||| ||||| |||| ||||||
Sbjct 363 AGAAATCTCTTCCATGGTTCTTATTAAGATGCGTGAGATCGCTGAAGCTTTCCTTGGCAC 422
Query 530 TCACAATCAAGAACGCCGTTGTTACCGTTCCAGCTTACTTCAACGACTCTCAGCGTCAGG 589
| || |||||||||| || ||||| ||||| ||||||||||| |||||||| ||||| |
Sbjct 423 T-ACGGTCAAGAACGCTGTGGTTACTGTTCCTGCTTACTTCAATGACTCTCAACGTCAAG 481
Query 590 CTACAAAGGATGCTGGTGTCATCGCTGGTTTGAACGTTATGCGAATCATCAACGAGCCTA 649
| ||||||||||||||||| || ||||||||||| ||| |||| |||||||||||||| |
Sbjct 482 CCACAAAGGATGCTGGTGTGATTGCTGGTTTGAATGTTTTGCGTATCATCAACGAGCCCA 541
Query 650 CAGCCGCCGCTATTGCCTACGGTCTTGACAAAAAGGCTACCAGCGTTGGAGAGAAGAATG 709
| || || |||||||| || ||||||||||| ||||| || || ||||||||||||||||
Sbjct 542 CCGCTGCTGCTATTGCTTATGGTCTTGACAAGAAGGCCACAAGTGTTGGAGAGAAGAATG 601
Query 710 TTCTT-ATCTTCGATCTTGGTGGTGGCACTTTTGATGTCTCTCTTCTTACCATTGAAGAG 768
|| || ||||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 602 TT-TTGATCTTTGATCTTGGTGGTGGTACATTTGATGTCTCTCTTCTTACCATTGAAGAA 660
Query 769 GGTATCTTTGAGGTGAAGGCAACTGCTGGTGACACCCATCTTGGTGGGGAAGATTTTGAC 828
|||||||||||||| |||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct 661 GGTATCTTTGAGGTCAAGGCAACAGCTGGTGATACTCATCTTGGTGGTGAAGATTTTGAC 720
Query 829 AACAGAATGGTTAACCACTTTGTCCAAGAGTTCAAGAGGAAGAGTAAGAAGGATATCACC 888
|||||||||||||| |||||||| |||||||| |||||||||| |||||||||||||||
Sbjct 721 AACAGAATGGTTAATCACTTTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATCACC 780
Query 889 GGTAACCCAAGAGCTCTTAGGAGGTTGAGAACTTCCTGTGAGAGAGCGAAGAGGACTCTT 948
|||| ||| |||||||| |||||||||||||| | ||||||||||| ||||||||||||
Sbjct 781 GGTAGCCCGAGAGCTCTCAGGAGGTTGAGAACAGCTTGTGAGAGAGCAAAGAGGACTCTT 840
Query 949 TCTTCCACTGCTCAGACCACCATCGAGATTGACTCTCTATACGAGGGTATC-GACTTCTA 1007
|||||||| || ||||| |||||||||||||||||| | | || || | | ||||||||
Sbjct 841 TCTTCCACCGCGCAGACGACCATCGAGATTGACTCTTTGTTTGATGG-AGCTGACTTCTA 899
Query 1008 CTCCACCA-TCACCCGTGCTAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTA 1066
|| ||| ||||||||||||||||||| ||| | |||||||||||||| ||||||||||
Sbjct 900 TTCT-CCAATCACCCGTGCTAGATTTGAAGAGATGAACATGGATCTCTTTAGGAAGTGTA 958
Query 1067 TGGAGCCAGTTGAGAAGTGTCTTCGTGATGCTAAGATGGACAAGAGCACTGTTCATGATG 1126
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 959 TGGAGCCTGTTGAGAAGTGTCTTCGTGATGCCAAGATGGACAAGAGCACTGTTCACGATA 1018
Query 1127 TTGTCCTTGTTGGTGGTTCTACCCGTATCCCTAAGGTTCAGCAATTGCTCCAGGACTTCT 1186
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1019 TTGTCCTTGTTGGTGGATCCACCCGTATCCCTAAGGTTCAGCAATTGCTTCAGGACTTCT 1078
Query 1187 TCAACGGCAAAGAGCTTTGCAAGTCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTG 1246
|||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |
Sbjct 1079 TCAACGGCAAAGAGCTTTGCAAGTCTATCAACCCTGATGAGGCTGTAGCTTACGGTGCAG 1138
Query 1247 CTGTCCAGGGAGCTATTCTCAGCGGTGAAGGAAACGAGAAGGTTCAAGATCTTCTATTGC 1306
|||| |||| || || || || ||||||||||||||||| |||||||||||||||||||
Sbjct 1139 CTGTTCAGGCTGCGATCCTAAGTGGTGAAGGAAACGAGAAAGTTCAAGATCTTCTATTGC 1198
Query 1307 TCGATGTCACTCCTCTCTCCCTTGGT-TTGGAAACTGCCGGTGGTGTCATGACCACTTTG 1365
|||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct 1199 TCGATGTCACTCCTCTCTCCCTTGGTCTTG-AAACTGCGGGTGGTGTCATGACCACTTTG 1257
Query 1366 ATCCCAAGGAACACAACCATCCCAACCAAGAAGGAACAAGTCTTCTCCACCTACTCAGAC 1425
|| | ||| |||||||| || ||||||||||||||||| |||||||| || || ||||||
Sbjct 1258 ATTCAAAGAAACACAACAATTCCAACCAAGAAGGAACAGGTCTTCTCAACTTATTCAGAC 1317
Query 1426 AACCAACCCGGTGTGTTGATCCAGGTGTACGAAGGAGAGAGAGCCAGAACCAAGGACAAC 1485
||||| || || || |||||||| || | ||||| ||||| || |||||||||||||||
Sbjct 1318 AACCAGCCTGGCGTTTTGATCCAAGTCTTTGAAGGTGAGAGGGCTAGAACCAAGGACAAC 1377
Query 1486 AACCTTCTTGGTAAATTTGAGCTCTCCGGAATTCCTCCAGCTCCTCGTGGTGTCCCCCAG 1545
||||| || || ||||| ||||| || ||||| ||||| || || || |||||||| |||
Sbjct 1378 AACCTCCTCGGCAAATTCGAGCTTTCTGGAATCCCTCCTGCCCCACGAGGTGTCCCTCAG 1437
Query 1546 ATCACAGTCTGCTTTGACATTGATGCCAATGGTATCCTCAATGTCTCTGCTGAGGACAAG 1605
||||| |||||||| |||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct 1438 ATCACTGTCTGCTTCGACATTGACGCCAATGGTATCCTTAATGTTTCTGCTGAGGACAAG 1497
Query 1606 ACCACCGGACAGAAGAACAAGATCACCATCACCAATGACAAGGGTCGTCTCTCCAAGGAT 1665
||||| ||| | |||||||||||||| ||||| ||||||||||||||| | || || ||
Sbjct 1498 ACCACTGGAAAAAAGAACAAGATCACTATCACTAATGACAAGGGTCGTTTGTCTAAAGAG 1557
Query 1666 GAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAGTCCGAAGACGAGGAGCACAAG 1725
|| |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||
Sbjct 1558 GATATTGAGAAGATGGTTCAAGAAGCTGAGAAGTACAAGTCTGAGGATGAGGAGCACAAG 1617
Query 1726 AAGAAGGTTGAAGCCAAGAACGCTCTCGAGAACTACGCTTACAACATGAGGAACACCATC 1785
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1618 AAGAAGGTTGAAGCCAAGAACGCTCTTGAGAACTACGCTTACAACATGAGGAACACAATC 1677
Query 1786 CAAGACGAGAAGATTGGTGAGAAGCTCCCGGCTGCAGACAAGAAGAAGATCGAGGATTCT 1845
| || |||||||| ||||||||||| ||||||||||||||||||||| | ||||| ||
Sbjct 1678 CGTGATGAGAAGATCGGTGAGAAGCTTCCGGCTGCAGACAAGAAGAAGGTTGAGGACTCG 1737
Query 1846 ATTGAGCAGGCGATTCAATGGCTCGAGGGTAACCAGTTGGCTGAGGCTGATGAGTTCGAA 1905
|||||| | || || |||||||| || |||||||| |||||||| ||||| ||||| |||
Sbjct 1738 ATTGAGGAAGCAATCCAATGGCTAGATGGTAACCAATTGGCTGAAGCTGACGAGTTTGAA 1797
Query 1906 GACAAGATGAAGGAATTGGAGAGCATCTGCAACCCAATCATTGCCAAGATGTACCAAGGA 1965
|||||||||||||| |||||||| | ||||| || ||||| || |||||||| ||||||
Sbjct 1798 GACAAGATGAAGGAGTTGGAGAGTGTTTGCAATCCGATCATCGCTAAGATGTATCAAGGA 1857
Query 1966 G---CTGGTGGTGAAGCCGGTGGTCCAGGTGCCT-CTGGTATGGACGA---TGATGCTCC 2018
| ||||||||||||| |||||||| || || | |||| |||||||| |||||||||
Sbjct 1858 GGAGCTGGTGGTGAAGCTGGTGGTCCTGGAGC-TGCTGGAATGGACGAAGATGATGCTCC 1916
Query 2019 CCCTGCTTCAGGCGGTGCTGGACCTAAGATCGAGGAGGTCGACTAA 2064
||||| ||||| |||||||| || ||||||||||| |||||||||
Sbjct 1917 TCCTGCCTCAGGTGGTGCTGGTCCCAAGATCGAGGAAGTCGACTAA 1962
> Ahg928617 jgi|Araly1|928617|scaffold_301074.1
Length=1994
Score = 1903 bits (1030), Expect = 0.0
Identities = 1680/1990 (84%), Gaps = 59/1990 (3%)
Strand=Plus/Plus
Query 104 TAAAAATGTCGGGTAAAGGAGAAGGACCAGCTATCGGTATCGATCTTGGTACCACTTACT 163
||| |||| | |||||||||||||| || ||||| ||||||||||| |||||||| ||||
Sbjct 17 TAACAATGGCTGGTAAAGGAGAAGGTCCTGCTATTGGTATCGATCTCGGTACCACCTACT 76
Query 164 CTTGCGTCGGAGTATGGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGAAACA 223
|||| || ||||| |||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 77 CTTGTGTTGGAGTTTGGCAACACGACCGTGTTGAGATCATCGCTAACGATCAAGGTAACA 136
Query 224 GAACCACGCCATCTTACGTTGCTTTCACCGACT-CCGAGA-GGTTGATCGGTGACGCAGC 281
| ||||| || || ||||| || ||||| || | ||| | ||||||| |||||||| ||
Sbjct 137 GGACCACACCGTCGTACGTCGCCTTCACTGA-TAGCGA-ACGGTTGATTGGTGACGCCGC 194
Query 282 TAAGAATCAGGTCGCCATGAACCCCG-TTAACACCGTTTTCGACGCTAAGAGGTTGATCG 340
||||||||||||||||||||| |||| ||||||| |||||||| || ||||||||||| |
Sbjct 195 TAAGAATCAGGTCGCCATGAA-CCCGATTAACACTGTTTTCGATGCGAAGAGGTTGATTG 253
Query 341 GTCGTCG-TTTCTCTGACAGCTCTGTTCAGAGTGACATGAAATTGTGGCCATTCAAGATT 399
||||| | ||| |||| ||||||||||| |||||||| ||||||||||| |||| || |
Sbjct 254 GTCGTAGATTT-ACTGATAGCTCTGTTCAAAGTGACATCAAATTGTGGCCCTTCACGA-T 311
Query 400 C-AAGCCGGACCTGCCGATAAGCCAATGATC-TACGTCGAA-TACAAGGGTGAAGAGAAA 456
| || | |||||||| || || || |||||| | ||| || |||||||| || || |||
Sbjct 312 CAAATCTGGACCTGCTGAAAAACCCATGATCGT-CGT-TAACTACAAGGGAGAGGATAAA 369
Query 457 GAGTTCGCAGCTGAGGAGATTTCTTCCATGGTTCTTATTAAGATGCGTGAGATTGCTGAG 516
||||| | ||||| || || ||||| ||| |||| || ||||||||||||||||||||
Sbjct 370 GAGTTTTCTGCTGAAGAAATCTCTTCTATGATTCTCATCAAGATGCGTGAGATTGCTGAA 429
Query 517 GCTTACCTTGGTGTC-ACAATCAAGAACGCCGTTGTTACC-GTTCCAGC-TTACTTCAAC 573
|| ||||||||| | || ||||||||||| ||||||||| |||||||| |||||||||
Sbjct 430 GCCTACCTTGGT-ACAACGATCAAGAACGCTGTTGTTACCTGTTCCAGCTTTACTTCAAT 488
Query 574 GACTCTCAGCGT-CAGGCTACAAAGGATGCTGGTGTCATCGCTGGTTTGAACGTTATGCG 632
|||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct 489 GACTCTCAGCGTCCAGGCAACTAAGGATGCTGGTGTCATTGCTGGTTTGAATGTTATGCG 548
Query 633 AATCATCAACGAGCCTACAGCCGCCGCTATTGCCTACGGTCTTGACAAAAAGGCTACCAG 692
||||||||||||||||| || || ||||||| || ||||||||||| ||||| |||||
Sbjct 549 TATCATCAACGAGCCTACTGCAGCTGCTATTGGGTATGGTCTTGACAAGAAGGCGACCAG 608
Query 693 CGTTGGAGAGAAGAATGTTCTT-ATCTTCGATCTTGGTGGTGGCACTTTTGATGTCTCTC 751
||||| |||||| | ||| || ||||| || |||||||| || ||||| ||||||||||
Sbjct 609 TGTTGGTGAGAAGCACGTT-TTGATCTTTGACCTTGGTGGCGGTACTTTCGATGTCTCTC 667
Query 752 TTCTTACCATTGAAGAGGGTATCTTTGAGGTGAAGGCAACTGCTGGTGACACCCATCTTG 811
|||||||||||||||| ||||||||||| |||||||| ||||| || ||||| |||||||
Sbjct 668 TTCTTACCATTGAAGAAGGTATCTTTGAAGTGAAGGCGACTGCAGGAGACACTCATCTTG 727
Query 812 GTGGGGAAGATTTTGACAACAGAATGGTTAACCACTTTGTCCAAGAGTTCAAGAGGAAGA 871
|||| || ||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 728 GTGGTGAGGATTTCGACAACAGAATGGTGAATCACTTTGTCCAAGAGTTCAAGAGGAAGA 787
Query 872 GTAAGAAGGATATCACCGGTAACCCAAGAGCTCTTAGGAGGTTGAGAACTTCCTGTGAGA 931
||||||||||| | ||||||||| |||||||| ||||||||||||||| |||||||||
Sbjct 788 ACAAGAAGGATATTAGCGGTAACCCGAGAGCTCTAAGGAGGTTGAGAACTGCCTGTGAGA 847
Query 932 GAGCGAAGAGGACTCTT-TCTTCCACTGCTCAGACCACCATCGAGATTGACTCTCTATAC 990
|||||||||||||| || ||||| || ||||||||||||||||| || |||||||| | |
Sbjct 848 GAGCGAAGAGGACT-TTGTCTTCTACGGCTCAGACCACCATCGAAATAGACTCTCTGTTC 906
Query 991 GAGGGTATCGACTTCTA--CTCCACCATCACCCGTGCTAGATTTGAGGAGCTCAACATGG 1048
|| ||||| |||||||| ||||| ||||||||||| ||||| |||||| | |||||||
Sbjct 907 GACGGTATTGACTTCTACGCTCCA--ATCACCCGTGCCAGATTCGAGGAGATGAACATGG 964
Query 1049 ATCTCTTCAGGAAGTGTATGGAGCCAGTTGAGAAGTGTCTTCGTGATGCTAAGATGGACA 1108
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 965 ATCTCTTCAGAAAGTGTATGGAGCCTGTTGAGAAGTGTCTTCGTGATGCTAAGATGGACA 1024
Query 1109 AGAGCACTGTTC-ATGATGTTGTCCTTGTTGGTGGTTCTACCCGTATCCCTAAGGTTCAG 1167
||| | | | | ||||||||||||| |||||||| || ||||||||||| ||||| |||
Sbjct 1025 AGAACTCAAT-CGATGATGTTGTCCTAGTTGGTGGCTCAACCCGTATCCCCAAGGTCCAG 1083
Query 1168 CAATTGCTCCAGGACTTCTTCAACGGCAAAGAGCTTTGCAAGTCTATTAACCCTGATGAG 1227
||||| |||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct 1084 CAATTACTCCTTGACTTCTTCAATGGCAAAGAGCTTTGCAAATCTATCAACCCCGATGAG 1143
Query 1228 GCTGTTGCCTACGGTGCTGCTGTCCAGGGAGCTATTCTCAGCGGTGAAGGAAACGAGAAG 1287
|||||||| || ||||| |||||||||| |||||||||||| ||||| || || ||||||
Sbjct 1144 GCTGTTGCATATGGTGCAGCTGTCCAGGCAGCTATTCTCAGTGGTGAGGGTAATGAGAAG 1203
Query 1288 GTTCAAGATCTTCTATTGCTCGATGTCACTCC-TCTCTCCCTTGGT-TTGGAAACTGCCG 1345
||||||||||| || |||||||||||||| || | | || |||||| ||| |||| || |
Sbjct 1204 GTTCAAGATCTCCTCTTGCTCGATGTCACACCAT-TATCTCTTGGTCTTG-AAACCGCTG 1261
Query 1346 GTGGTGTCATGACCA-CTTTGATCCCA-AGGAACACAACCATCCCAACCAAGAAGGAACA 1403
| || |||||||| ||| ||||| | || || ||||||||||| || |||||||| ||
Sbjct 1262 GAGGAGTCATGACTGTCTT-GATCC-AGAGAAATACAACCATCCCCACAAAGAAGGAGCA 1319
Query 1404 AGTCTTCTCCACCTACTCAGACAACCAACCCGGTGTGTTGATCCAGGTGTACGAAGGAGA 1463
||||||||| || || |||||||||||||||||||| |||||||| || || ||||| ||
Sbjct 1320 AGTCTTCTCAACTTATTCAGACAACCAACCCGGTGTCTTGATCCAAGTCTATGAAGGCGA 1379
Query 1464 GAGAGCCAGAACCAAGGACAACAACCTTCTTGG-TAAATTTGAGCTCTCCGGAATTCCTC 1522
|||||| |||||||||||||||||||| |||| |||||| ||||| || || |||||||
Sbjct 1380 GAGAGCAAGAACCAAGGACAACAACCTG-TTGGGTAAATTCGAGCTTTCTGGTATTCCTC 1438
Query 1523 CAGCTCCTCGTGGTGTCCCCCAGATCACAGTCTGCTTT-GACATTGATGCCAATGGTATC 1581
|||| || | ||||| || || ||||| ||||| ||| ||||||||||| || ||||||
Sbjct 1439 CAGCACCAAGAGGTGTTCCTCAAATCACTGTCTG-TTTCGACATTGATGCGAACGGTATC 1497
Query 1582 CTCAATGTCTCTGCTGAGGACAAGACCACCGGACAGAAGAACAAGATCACCATCACCAAT 1641
||||| ||||| |||||||||||||| || || |||||||||||||| || ||||| ||
Sbjct 1498 CTCAACGTCTCGGCTGAGGACAAGACAACGGGGCAGAAGAACAAGATTACAATCACAAAC 1557
Query 1642 GACAAGGGTCG-TCTCTCCAAGGATGAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTA 1700
|||||||| | | | || ||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 1558 GACAAGGGAAGAT-TGTCAAAGGACGAGATTGAGAAAATGGTTCAAGAAGCAGAGAAGTA 1616
Query 1701 CAAGTCCGAAGACGAGGAGCACAAGAAGAAGGTTGAAGCCAAGAACGCTCTCGAGAACTA 1760
|||||| || || |||||||||||||||||||| || ||||| || ||||||||||| ||
Sbjct 1617 CAAGTCAGAGGATGAGGAGCACAAGAAGAAGGTGGACGCCAAAAATGCTCTCGAGAATTA 1676
Query 1761 CGCTTACAACATGAGGAACACCATCCAAGACGAGAAGATTGGTGAGAAGCTCCCGGCTGC 1820
||| ||||||||||||||||| |||| || ||||||||||| |||||||| | || |
Sbjct 1677 CGCATACAACATGAGGAACACAATCCGCGATGAGAAGATTGGAGAGAAGCTTGCAGCAG- 1735
Query 1821 A-GACAAGAAGAAGATCGAGGATTCTATTGA-GCAGGCGATTCAATGGCTCGA-GGGTAA 1877
| |||||||||||||| || || || ||||| |||| | ||| ||||||| || ||| ||
Sbjct 1736 ATGACAAGAAGAAGATTGAAGACTCGATTGAAGCAGCC-ATTGAATGGCTAGAAGGG-AA 1793
Query 1878 CCAGTTGGCTGAG-GCTGATGAGTTCGAAGACAAGATGAAGGAA-TTGGAGAGCATCTGC 1935
||| | || ||| | |||||| ||||| ||||||||||| || ||| |||| || |||
Sbjct 1794 TCAGCTAGCAGAGTG-TGATGAATTCGAGGACAAGATGAAAGAGCTTG-AGAGTATTTGC 1851
Query 1936 AACCCAATCATTGCCAAGATGTACCAAGGAGCTGGTGGTGAAGCCGGTGGTCCAGGTGCC 1995
||||| |||||||| |||||||||||||| | |||| |||| |||||||||| |||
Sbjct 1852 AACCCGATCATTGCAAAGATGTACCAAGG--C-GGTG---AAGCTGGTGGTCCAGCTGCA 1905
Query 1996 TCTGGTATGGACGATGATGCTCCCCCTGCTTCAGGCGGTGCTGGACCTAAGATCGAGGAG 2055
|| |||||||| |||| ||| ||| || | || ||||| || |||||||| |||||
Sbjct 1906 GGAGGAATGGACGAGGATGTTCCTCCTTCTGCTGGAGGTGCAGGTCCTAAGATTGAGGAA 1965
Query 2056 GTCGACTAAT 2065
||||||||||
Sbjct 1966 GTCGACTAAT 1975
> Ahg314911 jgi|Araly1|314911|fgenesh1_pm.C_scaffold_1003691
Length=1821
Score = 1899 bits (1028), Expect = 0.0
Identities = 1566/1827 (86%), Gaps = 32/1827 (2%)
Strand=Plus/Plus
Query 115 GGTAAAGGAGAAGGACCAGCTATCGGTATCGATCTTGGTACCACTTACTCTTGCGTCGGA 174
|||||||||||||| ||||| ||||| || ||||||||||| || |||||||| || |||
Sbjct 7 GGTAAAGGAGAAGGTCCAGCGATCGGAATTGATCTTGGTACTACGTACTCTTGTGTTGGA 66
Query 175 GTATGGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGAAACAGAACCACGCCA 234
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 67 GTATGGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGTAACAGAACCACACCT 126
Query 235 TCTTACGTTGCTTTCACCGACTCCGAGAGGTTGATCGGTGACGCAGCTAAGAATCAGGTC 294
|| |||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||
Sbjct 127 TCGTACGTTGCTTTCACCGACTCTGAGCGGTTGATCGGTGATGCTGCTAAGAATCAGGTT 186
Query 295 GCCATGAACCCCGTTAACACCGTTTTCGACGCTAAGAGGTTGATCGGTCGTCGT-TTCTC 353
||||||||||| |||||||||||||||||||| ||||||||||| |||||| | |||
Sbjct 187 GCCATGAACCCGGTTAACACCGTTTTCGACGCAAAGAGGTTGATTGGTCGTA-TATTCAG 245
Query 354 TGACAGC-TCTGTTCAGAGTGACATGAAATTGTGGCCATTCAAGATTCAAGCC-GGACCT 411
| || || ||||| || ||||||||||| || ||||| |||||||| || || ||||
Sbjct 246 TAAC-GCATCTGTCCAAAGTGACATGAAGTTATGGCCTTTCAAGAT-CATCCCTGGACAA 303
Query 412 GCCGATAAGCCAATGATCTACGTCGAA-TACAAGGGTGAAGAGAAAGAGTTCGCAGCTGA 470
|| || || |||||||| | || || ||||| || ||||||||| | ||||| || ||
Sbjct 304 GCAGACAAACCAATGATTTTGGTA-AACTACAAAGGAGAAGAGAAACAATTCGCTGCGGA 362
Query 471 GGAGATTTCTTCCATGGTTCTTATTAAGATGCGTGAGATTGCTGAGGCTTACCTTGG-TG 529
|| || |||||||||||||| ||||||||||||||||||| || |||| |||||| |
Sbjct 363 AGAAATCTCTTCCATGGTTCTCGTTAAGATGCGTGAGATTGCAGAAGCTTTCCTTGGCTC 422
Query 530 TCACAATCAAGAACGCCGTTGTTACCGTTCCAGCTTACTTCAACGACTCTCAGCGTCAGG 589
| | ||||||||||| || || || ||||| ||||||||||| |||||||| ||||| |
Sbjct 423 TT-CGATCAAGAACGCTGTGGTCACTGTTCCTGCTTACTTCAATGACTCTCAACGTCAAG 481
Query 590 CTACAAAGGATGCTGGTGTCATCGCTGGTTTGAACGTTATGCGAATCATCAACGAGCCTA 649
|||||||||| |||||||| || ||||||||||| ||| |||| ||||||||||||||||
Sbjct 482 CTACAAAGGACGCTGGTGTGATTGCTGGTTTGAATGTTTTGCGTATCATCAACGAGCCTA 541
Query 650 CAGCCGCCGCTATTGCCTACGGTCTTGACAAAAAGGCTACCAGCGTTGGAGAGAAGAATG 709
| || || |||||||| || ||||||||||| ||||| ||||| |||||| | ||||| |
Sbjct 542 CTGCTGCTGCTATTGCTTATGGTCTTGACAAGAAGGCGACCAGTGTTGGATACAAGAACG 601
Query 710 TTCTT-ATCTTCGATCTTGGTGGTGGCACTTTTGATGTCTCTCTTCTTACCATTGAAGAG 768
| || ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 602 TG-TTGATCTTTGATCTTGGTGGTGGTACTTTTGATGTTTCTCTTCTTACCATTGAAGAA 660
Query 769 GGTATCTTTGAGGTGAAGGCAACTGCTGGTGACACCCATCTTGGTGGGGAAGATTTTGAC 828
|||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct 661 GGTATCTTTGAGGTCAAGGCAACAGCTGGTGACACTCATCTTGGTGGCGAAGATTTCGAC 720
Query 829 AACAGAATGGTTAACCACTTTGTCCAAGAGTTCAAGAGGAAGAGTAAGAAGGATATCACC 888
|||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||||
Sbjct 721 AACAGAATGGTTAATCACTTTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATCACT 780
Query 889 GGTAACCCAAGAGCTCTTAGGAGGTTGAGAACTTCCTGTGAGAGAGCGAAGAGGACTCTT 948
|||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||
Sbjct 781 GGTAACCCGAGAGCTCTTAGGAGGTTGAGAACTGCCTGTGAGAGAGCAAAGAGAACTCTT 840
Query 949 TCTTCCACTGCTCAGACCACCATCGAGATTGACTCTCTATACGAGGGTATCGACTTCTAC 1008
|||||||| || || || ||||| |||||||||| | | | ||||| || || |||||
Sbjct 841 TCTTCCACCGCGCAAACGACCATTGAGATTGACTTTTTGTTTGAGGGAATTGATTTCTAT 900
Query 1009 TCCACCA-TCACCCGTGCTAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTAT 1067
|| |||| |||| ||||| |||||||| ||| | |||||||||||||| ||||| |||||
Sbjct 901 TC-ACCAATCACTCGTGCAAGATTTGAAGAGATGAACATGGATCTCTTTAGGAAATGTAT 959
Query 1068 GGAGCCAGTTGAGAAGTGTCTTCGTGATGCTAAGATGGACAAGAGCACTGTTCATGATGT 1127
|||||| |||||||||||||||||||||||||| ||| |||||||||| | || |||||
Sbjct 960 GGAGCCTGTTGAGAAGTGTCTTCGTGATGCTAACATGAACAAGAGCACAATCCACGATGT 1019
Query 1128 TGTCCTTGTTGGTGGTTCTACCCGTATCCCTAAGGTTCAGCAA-TTGCTCCAGGACTTCT 1186
||||||||| |||||||||||||||||||| || ||||| || || || || | ||||
Sbjct 1020 TGTCCTTGTCGGTGGTTCTACCCGTATCCCGAAAGTTCAACAGCTT-CTACAAAATTTCT 1078
Query 1187 TCAACGGCAAAGAGCTTTGCAAGTCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTG 1246
| || || |||||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1079 TTAATGGTAAAGAGCTATGCAAGTCTATTAACCCTGATGAGGCTGTTGCATACGGTGCAG 1138
Query 1247 CTGTCCAGGGAGCTATTCTCAGCGGTGAAGGAAACGAGAAGGTTCAAGATCTTCTATTGC 1306
| || || | || ||||| ||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 1139 CGGTTCAAGCTGCGATTCTAAGCGGTGAAGGAAACGAAAAGGTCCAAGATCTTCTCTTGC 1198
Query 1307 TCGATGTCACTCCTCTCTCCCTTGGT-TTGGAAAC-TGCCGGTGGTGTCATGACCACTTT 1364
| |||||||| |||||||| |||||| ||| |||| | ||||||||||||||||||||
Sbjct 1199 TTGATGTCACACCTCTCTCTCTTGGTATTG-AAACCTTT-GGTGGTGTCATGACCACTTT 1256
Query 1365 GATCCCAAGGAACACAACCATCCCAACCAAGAAGGAACAAGTCTTCTCCACCTA-CTCAG 1423
||||| ||| |||||||| |||||||| ||||||||||| |||||| |||| || | |||
Sbjct 1257 GATCCAAAGAAACACAACAATCCCAACTAAGAAGGAACAGGTCTTCACCAC-TAACGCAG 1315
Query 1424 ACAACCAACCCGGTGTGTTGATCCAGGTGTACGAAGGAGAGAGAGCCAGAACCAAGGACA 1483
||||||| ||||| ||||||||||| || |||||||| |||||||| |||| ||| ||||
Sbjct 1316 ACAACCAGCCCGGCGTGTTGATCCAAGTCTACGAAGGTGAGAGAGCTAGAATCAAAGACA 1375
Query 1484 ACAACCTTCTTGGTAAATTTGAGCTCTCCGGAATTCCTCCAGCTCCTCGTGGTGTCCCCC 1543
||||| | ||||||||||||||||| || ||||| ||||| ||||| || ||||||||
Sbjct 1376 ACAACATCCTTGGTAAATTTGAGCTTTCTGGAATCCCTCCTGCTCCACGAGGTGTCCCTG 1435
Query 1544 AGATCACAGTCTGCTTTGACATTGATGCCAATGGTATCCTCAATGTCTCTGCTGAGGACA 1603
|| | || |||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1436 AGTTTACTGTCTGCTTCGACATTGACGCCAATGGTATCCTCAATGTCTCGGCTGAGGACA 1495
Query 1604 AGACCACCGGACAGAAGAACAAGATCACCATCACCAATGACAAGGGTCGTCTCTCCAAGG 1663
|||| || ||||| |||||||||||||| |||||||||||||| |||||||| || || |
Sbjct 1496 AGACAACGGGACAAAAGAACAAGATCACAATCACCAATGACAAAGGTCGTCTGTCTAAAG 1555
Query 1664 ATGAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAGTCCGAAGACGAGGAGCACA 1723
| || |||||||||||||| |||||||||||||||||||||| || || ||||||||||
Sbjct 1556 ACGATATTGAGAAGATGGTGCAAGAGGCTGAGAAGTACAAGTATGAGGATGAGGAGCACA 1615
Query 1724 AGAAGAAGGTTGAAGCCAAGAAC-GCTCTCGAGAACTACGCTTACAACATGAGGAACACC 1782
|||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||
Sbjct 1616 AGAAGAAGGTGGAAGCCAAGAACCG-TCTTGAGAACTACGCTTACAACATGAGGAACACA 1674
Query 1783 ATCCAAGACGAGAAGATTGGTGAGAAGCTCCCGGCTGCAGACAAGAAGAAGATCGAGGAT 1842
||| ||| | | | | ||| ||||| || |||| ||||||||||||||| || ||
Sbjct 1675 ATCTGTGAC-ATA-G---G-TGACAAGCTTCCAGCTGTAGACAAGAAGAAGATTGAAGAC 1728
Query 1843 TCTATTGA-GCAGGCGATTCAATGGCTCGAGGGTAACCAGTTGGCTGAGGCTGATGAGTT 1901
|||||||| | |||| || |||||||| || |||||||| ||| |||||||||| |||||
Sbjct 1729 TCTATTGAAG-AGGCAATGCAATGGCTTGATGGTAACCAATTGACTGAGGCTGACGAGTT 1787
Query 1902 CGAAGACAAGATGAAGGAATTGGAGAG 1928
||||||||||||||||| ||||||||
Sbjct 1788 TGAAGACAAGATGAAGGAGTTGGAGAG 1814
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89435895260
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5