BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G03480.1 Length=966 Score E Sequences producing significant alignments: (Bits) Value Ahg892258 jgi|Araly1|892258|Al_scaffold_0006_254 569 1e-161 Ahg892255 jgi|Araly1|892255|Al_scaffold_0006_251 538 3e-152 Ahg905423 jgi|Araly1|905423|Al_scaffold_0003_2551 486 1e-136 Ahg892253 jgi|Araly1|892253|Al_scaffold_0006_249 346 2e-94 Ahg897235 jgi|Araly1|897235|Al_scaffold_0005_1201 185 4e-46 Ahg892227 jgi|Araly1|892227|Al_scaffold_0006_223 148 6e-35 Ahg897421 jgi|Araly1|897421|Al_scaffold_0005_1387 102 4e-21 Ahg892422 jgi|Araly1|892422|Al_scaffold_0006_418 62.1 7e-09 Ahg487293 jgi|Araly1|487293|fgenesh2_kg.6__427__AT5G05430.1 62.1 7e-09 > Ahg892258 jgi|Araly1|892258|Al_scaffold_0006_254 Length=747 Score = 569 bits (308), Expect = 1e-161 Identities = 527/626 (84%), Gaps = 42/626 (7%) Strand=Plus/Plus Query 336 CACGACGATCTCCGTTGAGGGATATGACACTTCGCTTCAAAAGTATCTTCTCGAGCTCAT 395 ||||||| | |||||||||||||||||||||| ||||| |||||||| |||| | ||| | Sbjct 132 CACGACGGTTTCCGTTGAGGGATATGACACTTGGCTTCGAAAGTATCCTCTCAAACTCGT 191 Query 396 CTTGGAAAAACATTTCGATTCATGCGGAGAGATTAGACATGTTTATGTTCCCACAGACTA 455 |||||||||||||||| ||||||||||||||| | | || ||||||| |||||||||| Sbjct 192 GTTGGAAAAACATTTCGCTTCATGCGGAGAGATCACAAATATTTATGTACCCACAGACTT 251 Query 456 TGAAAGGGGTGTCCTCAAGAGTGTTGCCTTCTTGAGGATCGAGGGAGAAGGTGCCGAAGA 515 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 252 TGAAAGGGGTATCCTCAAGAGTGTTGCCTTCATGAGGATCGAGGGAGAAGGTGCCGAAGA 311 Query 516 CAAGGCATTGCAACTTAGTGGAACTGACGTTGTAGGATGGACTGTTATCGTTAAGCC--- 572 ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| Sbjct 312 AAAGGCATTGCAACTTAGTGGAACTGACGTCGGAGGATGGACTGCTATCGTTAAGCCTGC 371 Query 573 A---TC-C-GAAA-TATTCTATG-ATAATTCTTCGCGTGCT---CCT-G-----CAACTA 616 | || | |||| ||||| ||| || || ||| | |||| ||| | | || Sbjct 372 ACCGTCGCAGAAAGTATTC-ATGGATGATCCTTGGTATGCTGGTCCTAGGTGTGCTGCTG 430 Query 617 CTCCTGAGGCAT-CCAAAATACACAGGTTCCGTGTTACGGGATATGACGCTTCGCTTCCT 675 |||| | || || |||||||||||||| |||| ||||| ||||||||| ||||||||||| Sbjct 431 CTCCCGCGG-ATACCAAAATACACAGGATCCGCGTTACCGGATATGACACTTCGCTTCCT 489 Query 676 GAGATTGATATCCAGATGGCTCTGTGTAAACATTTCTCTTCATGTGGAGA-GATCTGGCA 734 ||||||||||| ||||| || ||||||||||||||||| ||||||||| | | ||| | | Sbjct 490 GAGATTGATATGCAGATCGCGCTGTGTAAACATTTCTCCTCATGTGGATACG-TCTCGAA 548 Query 735 AGTTACAGTTCTCTCTAG---TACAGCTTTCGTTTCTCTTAGAGGAGAAAGATGTGTAGA 791 ||||| |||||||||||| | |||||||| | | ||||| |||||||||||||||||| Sbjct 549 AGTTATAGTTCTCTCTAGCGGTGCAGCTTTCCTGTGTCTTAAAGGAGAAAGATGTGTAGA 608 Query 792 CAAGGCGCTGGAACTAAGTGGATGTAACATGGGAGAAAGGACTCTTGTAGTTAATGAACC 851 ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct 609 CAAGGCGCTGGAACTAAGTCGATGTAACATGGGAGGAAGGACTCTTGTAGTT---GAACC 665 Query 852 TGTTGTGCCGCAACCCGA-ACTCTTAAAAAGAAA-AAGG--G-TACGCCACTGCACTACC 906 ||||||||||| |||||| | || |||||| ||| |||| | | |||| |||||||| Sbjct 666 TGTTGTGCCGCGACCCGATA-TCCTAAAAA-AAAGAAGGCCGCT-CGCC--TGCACTACT 720 Query 907 ACTGGCTATA-TGCCCCCAGGTACAT 931 |||||||| | | | |||| |||||| Sbjct 721 ACTGGCTACACT-CTCCCAAGTACAT 745 Score = 261 bits (141), Expect = 7e-69 Identities = 211/244 (86%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 67 AGCACGGCTATTTGCGTTGAAGGATATGACACTTCGCTTAAG-GAGTATCCTCTCAGGCT 125 |||||| | ||| |||||| ||||||||||||| |||| | |||||||||||| || Sbjct 130 AGCACGACGGTTTCCGTTGAGGGATATGACACTTGGCTT-CGAAAGTATCCTCTCAAACT 188 Query 126 GGCGTT-GACAAAACATTTCGCTTCATGCGGAGAGATCACACAA-ATTTATGTTCCAAGA 183 | ||| || ||||||||||||||||||||||||||||||| || |||||||| || | | Sbjct 189 CGTGTTGGA-AAAACATTTCGCTTCATGCGGAGAGATCACA-AATATTTATGTACCCACA 246 Query 184 GACTTTAAAAAGAAAATCCTCAAGAGTGTCT-CCTTCATGTGGATCAAGGGAGAAGGTGC 242 |||||| ||| | |||||||||||||| | |||||||| ||||| ||||||||||||| Sbjct 247 GACTTTGAAAGGGGTATCCTCAAGAGTGT-TGCCTTCATGAGGATCGAGGGAGAAGGTGC 305 Query 243 CGAAGACAAGGCATTGCAACTTAGTGGAACTGACGTGGGAGGATGGACTGTTATCGTTAA 302 |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 306 CGAAGAAAAGGCATTGCAACTTAGTGGAACTGACGTCGGAGGATGGACTGCTATCGTTAA 365 Query 303 GCCT 306 |||| Sbjct 366 GCCT 369 > Ahg892255 jgi|Araly1|892255|Al_scaffold_0006_251 Length=789 Score = 538 bits (291), Expect = 3e-152 Identities = 521/625 (83%), Gaps = 44/625 (7%) Strand=Plus/Plus Query 336 CACGACGATCTCCGTTGAGGGATATGACACTTCGCTTCAAAAGTATCTTCTCGAGCTCAT 395 ||||||||| |||||||||||||||||||||| ||||| |||||||| |||| | ||| | Sbjct 93 CACGACGATTTCCGTTGAGGGATATGACACTTGGCTTCGAAAGTATCCTCTCAAACTCGT 152 Query 396 CTTGGAAAAACATTTCGATTCATGCGGAGAGATTAGACATGTTTATGTTCCCACAGACTA 455 |||||||||||||||| ||||||||||||||| | | || ||||||| |||||||||| Sbjct 153 GTTGGAAAAACATTTCGCTTCATGCGGAGAGATCACAAATATTTATGTACCCACAGACTT 212 Query 456 TGAAAGGGGTGTCCTCAAGAGTGTTGCCTTCTTGAGGATCGAGGGAGAAGGTGCCGAAGA 515 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 213 TGAAAGGGGTATCCTCAAGAGTGTTGCCTTCATGAGGATCGAGGGAGAAGGTGCCGAAGA 272 Query 516 CAAGGCATTGCAACTTAGTGGAACTGACGTTGTAGGATGGACTGTTATCGTTAAGCC--- 572 ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| Sbjct 273 AAAGGCATTGCAACTTAGTGGAACTGACGTCGGAGGATGGACTGCTATCGTTAAGCCTGC 332 Query 573 A---TC-C-GAAA-TATTCTATG-ATAATTCTTCGCGTGCT---CCT-G-----CAACTA 616 | || | |||| ||||| ||| || || ||| | |||| ||| | | || Sbjct 333 ACCGTCGCAGAAAGTATTC-ATGGATGATCCTTGGTATGCTGGTCCTAGGTGTGCTGCTG 391 Query 617 CTCCTGAGGCAT-CCAAAATACACAGGTTCCGTGTTACGGGATATGACGCTTCGCTTCCT 675 |||| | | || |||||| ||||| | |||| ||||| ||||||||| ||||||||||| Sbjct 392 CTCCCGCCG-ATACCAAAACACACATGATCCGCGTTACCGGATATGACACTTCGCTTCCT 450 Query 676 GAGATTGATATCCAGATGGCTCTGTGTAAACATTTCTCTTCATGTGGAG-AGATCTGGCA 734 |||||||||| ||||| || |||| |||||||||||| ||||||||| | |||||| | Sbjct 451 AAGATTGATATGCAGATCGCGCTGTATAAACATTTCTCCTCATGTGGATCA-ATCTGGAA 509 Query 735 AGTTACAGTTCTCTCTAG---TACAGCTTTCGTTTCTCTTAGA-GGAGAAAGATGTGTAG 790 ||||| |||||||||||| | ||||||| ||| |||| || |||||||||||||||| Sbjct 510 AGTTATAGTTCTCTCTAGCGGTGCAGCTTTTATTTATCTT-GAAGGAGAAAGATGTGTAG 568 Query 791 ACAAGGCGCTGGAACTAAGTGGATGTAACATGGGAGAAAGGACTCTTGTAGTTAATGAAC 850 ||||||||||||||||||||||| | |||||||||| | ||||||||||||| |||| Sbjct 569 ACAAGGCGCTGGAACTAAGTGGACGGAACATGGGAGGATCGACTCTTGTAGTT---GAAC 625 Query 851 CTGTTGTGCCGCAACCCGA-ACTCTTAAAAAGAAA-AAGG--G-TACGCCACTGCACTAC 905 |||||||||||| |||||| | ||||||||| ||| |||| | | |||| |||||||| Sbjct 626 CTGTTGTGCCGCGACCCGATA-TCTTAAAAA-AAAGAAGGCCGCT-CGCC--TGCACTAC 680 Query 906 CACTGGCTATA-TGCCCCCAGGTAC 929 |||||||||| | | |||| |||| Sbjct 681 TACTGGCTATACT-CTCCCAAGTAC 704 Score = 268 bits (145), Expect = 4e-71 Identities = 215/248 (87%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 63 CACTAGCACGGCTATTTGCGTTGAAGGATATGACACTTCGCTTAAG-GAGTATCCTCTCA 121 ||| |||||| | |||| |||||| ||||||||||||| |||| | |||||||||||| Sbjct 87 CACCAGCACGACGATTTCCGTTGAGGGATATGACACTTGGCTT-CGAAAGTATCCTCTCA 145 Query 122 GGCTGGCGTT-GACAAAACATTTCGCTTCATGCGGAGAGATCACACAA-ATTTATGTTCC 179 || | ||| || ||||||||||||||||||||||||||||||| || |||||||| || Sbjct 146 AACTCGTGTTGGA-AAAACATTTCGCTTCATGCGGAGAGATCACA-AATATTTATGTACC 203 Query 180 AAGAGACTTTAAAAAGAAAATCCTCAAGAGTGTCT-CCTTCATGTGGATCAAGGGAGAAG 238 | ||||||| ||| | |||||||||||||| | |||||||| ||||| ||||||||| Sbjct 204 CACAGACTTTGAAAGGGGTATCCTCAAGAGTGT-TGCCTTCATGAGGATCGAGGGAGAAG 262 Query 239 GTGCCGAAGACAAGGCATTGCAACTTAGTGGAACTGACGTGGGAGGATGGACTGTTATCG 298 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 263 GTGCCGAAGAAAAGGCATTGCAACTTAGTGGAACTGACGTCGGAGGATGGACTGCTATCG 322 Query 299 TTAAGCCT 306 |||||||| Sbjct 323 TTAAGCCT 330 > Ahg905423 jgi|Araly1|905423|Al_scaffold_0003_2551 Length=960 Score = 486 bits (263), Expect = 1e-136 Identities = 502/611 (82%), Gaps = 42/611 (7%) Strand=Plus/Plus Query 336 CACGACGATCTCCGTTGAGGGATATGACACTTCGCTTCAAAAGTATCTTCTCGAGCTCAT 395 ||||||| | |||||||||||||||||||||| ||||| |||||||| |||| | ||| | Sbjct 132 CACGACGGTTTCCGTTGAGGGATATGACACTTGGCTTCGAAAGTATCCTCTCAAACTCGT 191 Query 396 CTTGGAAAAACATTTCGATTCATGCGGAGAGATTAGACATGTTTATGTTCCCACAGACTA 455 |||||||||||||||| ||||||||||||||| | | || ||||||| |||||||||| Sbjct 192 GTTGGAAAAACATTTCGCTTCATGCGGAGAGATCACAAATATTTATGTACCCACAGACTT 251 Query 456 TGAAAGGGGTGTCCTCAAGAGTGTTGCCTTCTTGAGGATCGAGGGAGAAGGTGCCGAAGA 515 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 252 TGAAAGGGGTATCCTCAAGAGTGTTGCCTTCATGAGGATCGAGGGAGAAGGTGCCGAAGA 311 Query 516 CAAGGCATTGCAACTTAGTGGAACTGACGTTGTAGGATGGACTGTTATCGTTAAGCC--- 572 ||||||||||||||||||||||||||| | | ||||||||||| |||||||||||| Sbjct 312 AAAGGCATTGCAACTTAGTGGAACTGACATCGGAGGATGGACTGCTATCGTTAAGCCTGC 371 Query 573 ATCC-G--A-AA--TATTCTATG-ATAATTCTTCGCGTGCT---CCT-G-----CAACTA 616 | || | | || ||||| ||| || || || | |||| ||| | | || Sbjct 372 ACCCTGGCAGAAAGTATTC-ATGGATGATCCTAGGTATGCTGGTCCTAGGTGTGCTGCTG 430 Query 617 CTCCTGAGGCAT-CCAAAATACACAGGTTCCGTGTTACGGGATATGACGCTTCGCTTCCT 675 |||| | | || |||||| ||||| | |||| |||| ||||||||| ||||||||||| Sbjct 431 CTCCCGCCG-ATACCAAAACACACATGATCCGCATTACCGGATATGACACTTCGCTTCCT 489 Query 676 GAGATTGATATCCAGATGGCTCTGTGTAAACATTTCTCTTCATGTGGAG-AGATCTGGCA 734 |||||||||| ||||| || |||| |||||||||||| ||||||||| | |||||| | Sbjct 490 AAGATTGATATGCAGATCGCGCTGTATAAACATTTCTCCTCATGTGGATCA-ATCTGGAA 548 Query 735 AGTTACAGTTCTCTCTAG---TACAGCTTTCGTTTCTCTTAGA-GGAGAAAGATGTGTAG 790 ||||| ||||||| || | ||||||| ||| |||| || |||||||||||||||| Sbjct 549 AGTTATAGTTCTCAAAAGCGGTGCAGCTTTTATTTATCTT-GAAGGAGAAAGATGTGTAG 607 Query 791 ACAAGGCGCTGGAACTAAGTGGATGTAACATGGGAGAAAGGACTCTTGTAGTTAATGAAC 850 ||||||||||||||||||||||| | |||||||||| | ||||||||||||| |||| Sbjct 608 ACAAGGCGCTGGAACTAAGTGGACGGAACATGGGAGGATCGACTCTTGTAGTT---GAAC 664 Query 851 CTGTTGTGCCGCAACCCGA-ACTCTTAAAAAGAAA-AAGG--G-TACGCCACTGCACTAC 905 |||||||||||| |||||| | || |||||| ||| |||| | | |||| |||||||| Sbjct 665 CTGTTGTGCCGCGACCCGATA-TCCTAAAAA-AAAGAAGGCCGCT-CGCC--TGCACTAC 719 Query 906 CACTGGCTATA 916 |||||||||| Sbjct 720 TACTGGCTATA 730 Score = 255 bits (138), Expect = 3e-67 Identities = 210/244 (86%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 67 AGCACGGCTATTTGCGTTGAAGGATATGACACTTCGCTTAAG-GAGTATCCTCTCAGGCT 125 |||||| | ||| |||||| ||||||||||||| |||| | |||||||||||| || Sbjct 130 AGCACGACGGTTTCCGTTGAGGGATATGACACTTGGCTT-CGAAAGTATCCTCTCAAACT 188 Query 126 GGCGTT-GACAAAACATTTCGCTTCATGCGGAGAGATCACACAA-ATTTATGTTCCAAGA 183 | ||| || ||||||||||||||||||||||||||||||| || |||||||| || | | Sbjct 189 CGTGTTGGA-AAAACATTTCGCTTCATGCGGAGAGATCACA-AATATTTATGTACCCACA 246 Query 184 GACTTTAAAAAGAAAATCCTCAAGAGTGTCT-CCTTCATGTGGATCAAGGGAGAAGGTGC 242 |||||| ||| | |||||||||||||| | |||||||| ||||| ||||||||||||| Sbjct 247 GACTTTGAAAGGGGTATCCTCAAGAGTGT-TGCCTTCATGAGGATCGAGGGAGAAGGTGC 305 Query 243 CGAAGACAAGGCATTGCAACTTAGTGGAACTGACGTGGGAGGATGGACTGTTATCGTTAA 302 |||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||||| Sbjct 306 CGAAGAAAAGGCATTGCAACTTAGTGGAACTGACATCGGAGGATGGACTGCTATCGTTAA 365 Query 303 GCCT 306 |||| Sbjct 366 GCCT 369 > Ahg892253 jgi|Araly1|892253|Al_scaffold_0006_249 Length=486 Score = 346 bits (187), Expect = 2e-94 Identities = 279/321 (87%), Gaps = 15/321 (5%) Strand=Plus/Plus Query 1 ATGGAAGAATCCGCCATTAAACGTCTGAAGTCGCTGGAATTGAACGATA---GT---GA- 53 ||||||||||| ||||| ||| ||||||| | ||||||||| ||||||| || || Sbjct 1 ATGGAAGAATCAGCCATCAAAGGTCTGAAATTGCTGGAATTCAACGATAGTGGTGCAGAC 60 Query 54 --T--AA---ACAGT-CCACTAGCACGGCTATTTGCGTTGAAGGATATGACACTTCGCTT 105 | || ||||| |||||| |||||||||| ||||||||||||| ||||| ||||| Sbjct 61 TCTCAAACTCACAGTAGCACTAGTACGGCTATTTCCGTTGAAGGATATAACACTACGCTT 120 Query 106 AAGGAGTATCCTCTCAGGCTGGCGTTGACAAAACATTTCGCTTCATGCGGAGAGATCACA 165 |||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| Sbjct 121 AAGGAGTATCCTCTCAGGCTCGCATTGGCAAAACATTTCGCTTCATGCGGAAAGATCACA 180 Query 166 CAAATTTATGTTCCAAGAGACTTTAAAAAGAAAATCCTCAAGAGTGTCTCCTTCATGTGG 225 |||||||||||||| |||||||||||||||||| |||||||||| | ||||||| | ||| Sbjct 181 CAAATTTATGTTCCTAGAGACTTTAAAAAGAAACTCCTCAAGAGAGCCTCCTTCGTTTGG 240 Query 226 ATCAAGGGAGAAGGTGCCGAAGACAAGGCATTGCAACTTAGTGGAACTGACGTGGGAGGA 285 ||| ||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 241 ATCGAGGGAGACGATGCCGAAGAAAAGGCATTGCAACTTAGTGGAACTGACGTTGGAGGA 300 Query 286 TGGACTGTTATCGTTAAGCCT 306 ||||||| ||||||||||||| Sbjct 301 TGGACTGCTATCGTTAAGCCT 321 Score = 198 bits (107), Expect = 5e-50 Identities = 192/232 (83%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 346 TCCGTTGAGGGATATGACACTTCGCTTCAA-AAGTATCTTCTCGA-GCTCATC-TTGGAA 402 |||||||| |||||| ||||| ||||| || |||||| |||| | |||| | |||| | Sbjct 94 TCCGTTGAAGGATATAACACTACGCTT-AAGGAGTATCCTCTC-AGGCTC-GCATTGGCA 150 Query 403 AAACATTTCGATTCATGCGGAGAGATTAGACATGTTTATGTTCCCACAGACTATGAAAGG 462 |||||||||| |||||||||| |||| | ||| |||||||||| | ||||| | ||| | Sbjct 151 AAACATTTCGCTTCATGCGGAAAGATCACACAAATTTATGTTCCTAGAGACTTTAAAAAG 210 Query 463 GGTGTCCTCAAGAGTG-TTGCCTTC-TTGAGGATCGAGGGAGAAGGTGCCGAAGACAAGG 520 |||||||||| | | ||||| || ||||||||||||| | ||||||||| |||| Sbjct 211 AAACTCCTCAAGAGAGCCT-CCTTCGTT-TGGATCGAGGGAGACGATGCCGAAGAAAAGG 268 Query 521 CATTGCAACTTAGTGGAACTGACGTTGTAGGATGGACTGTTATCGTTAAGCC 572 ||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 269 CATTGCAACTTAGTGGAACTGACGTTGGAGGATGGACTGCTATCGTTAAGCC 320 > Ahg897235 jgi|Araly1|897235|Al_scaffold_0005_1201 Length=369 Score = 185 bits (100), Expect = 4e-46 Identities = 144/165 (87%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 130 TTGACAAAACATTTCGCTTCATGCGGAGAGATCACACAAATTTATGTTCCAAGAGACTTT 189 |||| |||||||||| ||||||||||| |||||| ||| || |||||||||||||||||| Sbjct 37 TTGAGAAAACATTTCTCTTCATGCGGAAAGATCAAACATATCTATGTTCCAAGAGACTTT 96 Query 190 AAAAAG-AAAATCCTCAAGAGTGTCT-CCTTCATGTGGATCAAGGGAGAAGGTGCCGAAG 247 |||| | ||||||||| || | | |||||| |||| |||||||||||||||||| Sbjct 97 -GAAAGTGGTACCCTCAAGAGAGT-TGCTTTCATGAGGATTGAGGGAGAAGGTGCCGAAG 154 Query 248 ACAAGGCATTGCAACTTAGTGGAACTGACGTGGGAGGATGGACTG 292 ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 155 ACAAGGCATTGGAACTTAGTGGAACTGACGTGGGAGGATGGACTG 199 Score = 182 bits (98), Expect = 5e-45 Identities = 138/158 (87%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 402 AAAACATTTCGATTCATGCGGAGAGATTAGACATGTTTATGTTCCCACAGACTATGAAAG 461 |||||||||| |||||||||| |||| | |||| | |||||||| | ||||| |||||| Sbjct 42 AAAACATTTCTCTTCATGCGGAAAGATCAAACATATCTATGTTCCAAGAGACTTTGAAAG 101 Query 462 GGGTGTCCTCAAGAGTGTTGCCTTCTTGAGGATCGAGGGAGAAGGTGCCGAAGACAAGGC 521 ||| ||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct 102 TGGTACCCTCAAGAGAGTTGCTTTCATGAGGATTGAGGGAGAAGGTGCCGAAGACAAGGC 161 Query 522 ATTGCAACTTAGTGGAACTGACGTTGTAGGATGGACTG 559 |||| ||||||||||||||||||| | ||||||||||| Sbjct 162 ATTGGAACTTAGTGGAACTGACGTGGGAGGATGGACTG 199 > Ahg892227 jgi|Araly1|892227|Al_scaffold_0006_223 Length=579 Score = 148 bits (80), Expect = 6e-35 Identities = 94/101 (93%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 215 CCTTCATGTGGATCAAGGGAGAAGGTGCCGAAGACAAGGCATTGCAACTTAGTGGAACTG 274 |||||||| ||||| ||||||||| || |||||| ||||||||||||||||||||||||| Sbjct 227 CCTTCATGAGGATCGAGGGAGAAGATGTCGAAGAAAAGGCATTGCAACTTAGTGGAACTG 286 Query 275 ACGTGGGAGGATGGACTGTTATCGTTAAGCCTAAACCCAAA 315 |||| ||||||||||||| |||||||||||||||||||||| Sbjct 287 ACGTTGGAGGATGGACTGCTATCGTTAAGCCTAAACCCAAA 327 Score = 145 bits (78), Expect = 7e-34 Identities = 90/96 (94%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 477 TGTTGCCTTCTTGAGGATCGAGGGAGAAGGTGCCGAAGACAAGGCATTGCAACTTAGTGG 536 |||||||||| |||||||||||||||||| || |||||| |||||||||||||||||||| Sbjct 222 TGTTGCCTTCATGAGGATCGAGGGAGAAGATGTCGAAGAAAAGGCATTGCAACTTAGTGG 281 Query 537 AACTGACGTTGTAGGATGGACTGTTATCGTTAAGCC 572 ||||||||||| ||||||||||| |||||||||||| Sbjct 282 AACTGACGTTGGAGGATGGACTGCTATCGTTAAGCC 317 > Ahg897421 jgi|Araly1|897421|Al_scaffold_0005_1387 Length=555 Score = 102 bits (55), Expect = 4e-21 Identities = 90/106 (85%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 201 CCTCAAGAGTGTCT-CCTTCATGTGGA-TCAAGGGAGAAGGTGCCGAA-GACAAGGCATT 257 ||||||||| || | |||||||| ||| | || |||||| |||| || || || ||||| Sbjct 123 CCTCAAGAGAGT-TGCCTTCATGAGGATTGAA-GGAGAAAATGCC-AATGAGAAAGCATT 179 Query 258 GCAACTTAGTGGAACTGACGTGGGAGGATGGACTGTTATCGTTAAG 303 | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 180 GGAACTTAGTGGAACTGACGTGGGAGGATGGACTGCAATCGTTAAG 225 > Ahg892422 jgi|Araly1|892422|Al_scaffold_0006_418 Length=1017 Score = 62.1 bits (33), Expect = 7e-09 Identities = 71/88 (81%), Gaps = 8/88 (9%) Strand=Plus/Plus Query 649 GTTACGGGATATGACGCTTCG-CTTCCTGA-GATTGATATCCAGATGGC-TCTGTGTA-A 704 ||||||||||||||| || | |||||| ||| ||| || | | ||| | || | | | Sbjct 55 GTTACGGGATATGACACTG-GTCTTCCTCTTGAT-GATGTCTACACGGCGT-TG-GCAGA 110 Query 705 ACATTTCTCTTCATGTGGAGAGATCTGG 732 |||||||||||||||||||||||||||| Sbjct 111 ACATTTCTCTTCATGTGGAGAGATCTGG 138 > Ahg487293 jgi|Araly1|487293|fgenesh2_kg.6__427__AT5G05430.1 Length=415 Score = 62.1 bits (33), Expect = 7e-09 Identities = 71/88 (81%), Gaps = 8/88 (9%) Strand=Plus/Plus Query 649 GTTACGGGATATGACGCTTCG-CTTCCTGA-GATTGATATCCAGATGGC-TCTGTGTA-A 704 ||||||||||||||| || | |||||| ||| ||| || | | ||| | || | | | Sbjct 19 GTTACGGGATATGACACTG-GTCTTCCTCTTGAT-GATGTCTACACGGCGT-TG-GCAGA 74 Query 705 ACATTTCTCTTCATGTGGAGAGATCTGG 732 |||||||||||||||||||||||||||| Sbjct 75 ACATTTCTCTTCATGTGGAGAGATCTGG 102 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35873664897 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5