BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G04480.1
Length=3718
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487229 jgi|Araly1|487229|fgenesh2_kg.6__363__AT5G04480.1 5664 0.0
> Ahg487229 jgi|Araly1|487229|fgenesh2_kg.6__363__AT5G04480.1
Length=3644
Score = 5664 bits (3067), Expect = 0.0
Identities = 3497/3695 (95%), Gaps = 67/3695 (2%)
Strand=Plus/Plus
Query 39 AAAAAGTTTTACGAAAATCAAATTCTCAAATCTGAATCTCTTTCTCTCTTTCTCATGGTG 98
||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1 AAAAAGTTTTACGCAAATC-AATTCTCAAATCTGAATCTCTTTCTCTCTCTCTAATGGTG 59
Query 99 AAGTTTTGTGGCACCTGAAACTGAGAGAGAAGCTTCTTCTTCTTCTTCGTATTGAAACAA 158
|||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 60 AAGTTTTGTGGCACCTGAAACTGAGAGAGAAG---CTTCTTCTTCTTC----T------- 105
Query 159 ACCAGTGAAGCAGAGCAGTTTTTCTTCTTTCTCCATGGTGAGAAACTCTCTTTCGCTCGA 218
| | ||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 106 -----T----C--AGCAGTTTTTCTTCTTTCTCCATGGGGAGAAACTCTCTCTCGCTCGA 154
Query 219 GATCGATGACAATGGCGGCGCCGGAAGAGACGGTAAT--C-ACAACGCTAACAACGTCGC 275
|||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 155 GATCGACGACAATGGCGGCGCCGGAAGAGACGGTAATCACAACAACGCTAACAACGTCGC 214
Query 276 CGGAAACGGAGATACTTCTTTCCATTCTATTAGAGATCGACTCCGTCTCAAGCGTAATTC 335
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 215 CGGAAACGGAGAGACTTCTTTCCATTCTATTAGAGATCGACTCCGTCTCAAGCGCAATTC 274
Query 336 GAGCGATAGGCGAGATCGATCTCACTCAGGTTTGGATCGGCCTTCATTGCGTACCCGACC 395
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 275 AAGCGATAGGCGAGATCGATCTCACTCAGGTTTGGATCGGCCTTCATTGCGTAACCGACC 334
Query 396 TCATCACATTGGCCGATCGTTGAATCGCAAGGGCTTGCTTTCTTTGCTTAAGCCTCGTGG 455
||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 335 TCATCACATTGCCCGATCGTTGAATCGCAAGGGCTTGATTTCGTTGCTTAAGCCTCGTGG 394
Query 456 TACCTGTTTGCTCTACTTTCTCGTCGCGTTTACGGTTTGTGCGTTTGTCATGTCATCTCT 515
|||||||||||||||||| ||||||||||| |||||||||||||| || |||||||| ||
Sbjct 395 TACCTGTTTGCTCTACTTCCTCGTCGCGTTCACGGTTTGTGCGTTCGTTATGTCATCGCT 454
Query 516 GTTGCTTCAGAATTCGATTACTTGGCAAGGGAATGTGAAAGGAGGGCAAGTTAGAAGTCA 575
|||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct 455 GTTGCTTCAGAATTCGATTACTTGGCAAGGGAATGTGAAAAGAGGGCAGGTGAGAAGTCA 514
Query 576 AATTGGATTGGGGAGTACGTTGAAGTATGTTCCTGGAGGAATTGCGAGAACATTGATTGA 635
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 515 AATTGGATTGGGGAGTACGTTGAAGTATGTGCCTGGAGGAATTGCGAGAACATTGATTGA 574
Query 636 AGGAAAAGGGCTTGATCCCTTGCGTTCAGCGGTCAGGATCGGTGTTCGTCCGCCCAGGCT 695
|||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 575 AGGAGAAGGGCTTGATCCCTTGCGTTCAACGGTCAGGATCGGCGTTCGTCCGCCAAGGCT 634
Query 696 AGCTCTCGTACTAGGGAATATGAAGAAAGATCCCCGAACACTAATGTTGGTCACTGTTAT 755
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 635 AGCTCTTGTACTAGGGAATATGAAGAAAGATCCCCGAACACTAATGTTGGTCACAGTTAT 694
Query 756 GAAGAATCTTCAAAAACTTGGTTATGTGTTTAAGGTTTTTGCCGTAGAGAATGGTGAAGC 815
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 695 GAAGAATCTTCAAAAACTGGGTTATGTGTTTAAGGTTTTTGCCGTAGAGAATGGTGAAGC 754
Query 816 ACGCTCATTGTGGGAACAGCTAGCTGGCCATGTCAAAGTTTTGGTTTCAGAGCAGTTGGG 875
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 755 ACGCTCATTGTGGGAACACCTAGCTGGCCATGTCAAAGTTTTGGTTTCAGAGCAGTTGGG 814
Query 876 GCACGCTGATTGGACAATTTTTGAAGGTGTTATTGCTGATTCGCTTGAAGCAAAAGAAGC 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCACGCTGATTGGACAATTTTTGAAGGTGTTATTGCTGATTCGCTTGAAGCAAAAGAAGC 874
Query 936 CATTTCAAGCCTTATGCAGGAGCCATTTCGTTCAGTACCACTTATATGGATAGTTCATGA 995
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 CATTTCAAGTCTTATGCAGGAGCCATTTCGTTCAGTACCACTTATATGGATAGTTCATGA 934
Query 996 AGATATTCTTGCAAATCGGTTACCTGTTTACCAAAGGATGGGCCAGAATTCTCTTATCTC 1055
||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 935 AGATATTCTTGCAAATCAGTTGCCTGTTTACCAAAGGATGGGCCAGAACTCTCTAATCTC 994
Query 1056 CCACTGGAGAAGTGCTTTTGCGAGAGCAGATGTGGTTGTCTTTCCACAGTTTACCCTGCC 1115
||| ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 995 CCATTGGAGAAATGCTTTTGCTAGAGCAGATGTTGTTGTCTTTCCACAGTTTACCCTGCC 1054
Query 1116 GATGTTGCATAGCGTTCTTGATGATGGGAACTTCGTTGTGATTCCAGAATCTGTAGTTGA 1175
||||||||| ||| ||||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct 1055 GATGTTGCACAGCATTCTTGACGATGGGAATTTCGTTGTGATTCCGGAATCTGTAGTTGA 1114
Query 1176 TGTTTGGGCTGCGGAAAGCTACAGTGAAACCCATACAAAACAAAATCTAAGGGAAATTAA 1235
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1115 TATTTGGGCTGCGGAAAGCTACAGTGAAACCCATACAAAACAAAAACTAAGGGAAATTAA 1174
Query 1236 CGAATTTGGTGAGGATGACGTGATCATCTTGGTGCTTGGGAGCTCCTTCTTTTATGATGA 1295
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1175 CGAATTTGGCGAGGAAGACGTGATCATCTTGGTGCTTGGGAGCTCCTTCTTTTATAATGA 1234
Query 1296 GTTTTCTTGGGATAATGCCGTGGCAATGCACATGTTGGGACCACTTTTAACACGATATGG 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 GTTTTCTTGGGATAATGCCGTGGCAATGCACATGTTGGGACCACTTTTAACACGATATGG 1294
Query 1356 GAGGAGAAAAGATACAAGCGGTTCCTTTAAGTTTGTTTTTCTATATGGTAATTCTACCAA 1415
||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 1295 GAGGAGAAAAGATACCAGCAATTCTTTTAAGTTTGTTTTTCTATATGGTAATTCTACCAA 1354
Query 1416 AGGCCAGAGTGATGCTGTACAGGAGGTTGCATCGAGGCTCGGGTTGACAGAAGGCACTGT 1475
||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1355 AGGACAGAGTGATGCTGTACAGGAGGTTGCATCGAGGCTCGGGCTGACTGAAGGCACTGT 1414
Query 1476 TCGGCATTTTGGTTTGAACGAGGATGTGAATAGAGTTCTACGGATGGCAGATATTCTTGT 1535
|||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||
Sbjct 1415 TCGGCATTTTGGTTTGAACGAGGATGTGAATAAAGTTCTACTGATGGCTGATATTCTTGT 1474
Query 1536 TTATGCTTCGTCCCAAGAGGAACAAAACTTTCCTCCATTAATTGTACGAGCTATGAGCTT 1595
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1475 TTATGCTTCGTCCCAAGAGGAACAAAATTTTCCTCCATTAATTGTGCGAGCTATGAGCTT 1534
Query 1596 TGGCATCCCTATCATAACACCTGACTTTCCTATCATGAAAAAATATATGGCTGATGAAGT 1655
||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| || ||
Sbjct 1535 TGGCATCCCTATCATAACACCCGACTTTCCTGTCATGAAAAAATATCTGGCTGACGAGGT 1594
Query 1656 TCATGGAATATTTTTTCGAAGAAACGATCCTGATGCATTGTTGAAGGCTTTCTCACCCTT 1715
||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1595 TCATGGAATATTTTTCCGAAGAAACGATCCTGATGCACTGTTGAAGGCTTTTTCACCCTT 1654
Query 1716 GATATCAGATGGAAGGCTCTCTAAATTTGCTCAAACAATTGCTTCTTCAGGAAGACTCTT 1775
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1655 GATATCAGATGGAAGGCTCTCTGAGTTTGCTCAAACAATTGCTTCTTCAGGAAGACTCTT 1714
Query 1776 AACTAAGAACTTGATGGCAACAGAATGCATTACTGGTTATGCTCGGCTTTTGGAGAACAT 1835
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1715 AACTAAGAACTTAATGGCAACAGAATGCATTACTGGTTATGCTCGGCTTTTGGAGAACAT 1774
Query 1836 GCTCCA-TTTCCCATCTGATACTTTCTTGCCAGGTTCCATTTCTCAACTTCAAGTGGCAG 1894
||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 1775 ACTCCACTTT-CCATCTGATACTTTCTTGCCAGGTTCTATTTCTCAACTTCAAGGGGCAT 1833
Query 1895 CATGGGAGTGGAATTTCTTCCGGAGCGAATTAGAGCAGCCAAAAAGTTTCATCTTGGACT 1954
|||||||||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||
Sbjct 1834 CATGGGAGTGGAGTTTCTTCAGGAGCGAATTAGAGCAGCCAAAAAGCTTCATCCTGGACT 1893
Query 1955 CCGCTTATGCTTTCATTGGAAAATCTGGAATTGTTTTCCAAGTCGAAGAGAAGTTCATGG 2014
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1894 CCGCTTATGCTTCCATTGGAAAATCTGGAATTGTTTTCCAAGTCGAAGAGAAGTTCATGG 1953
Query 2015 GTGTTATTGAGTCAACAAACCCTGTTGACAACAATACCCTGTTTGTTTCCGATGAGCTTC 2074
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1954 GTGTTATTGAGTCAACAAACCCTGTTGACAACAGTACCCTGTTTGTTTCCGATGAGCTTC 2013
Query 2075 CTTCCAAATTAGACTGGGATGTTCTTGAAGAGATTGAGGGAGCTGAAGAGTATGAGAAAG 2134
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2014 CTTCCAAATTAGACTGGGATGTTCTTGAAGAGATTGAGGGAGCTGAAGAGTACGAGAAAG 2073
Query 2135 TAGAATCTGAGGAGCTAGAGGACAGAATGGAAAGAGATGTTGAGGATTGGGAGGAAATAT 2194
||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct 2074 TAGAATCTGAGGAGCTAGAGGACAGAATGGAAAGAGATGTTGAAGACTGGGAGGAGATAT 2133
Query 2195 ACCGGAATGCTCGCAAATCGGAGAAGCTCAAATTTGAGGTGAATGAACGGGATGAAGGAG 2254
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2134 ACCGAAATGCTCGCAAATCGGAGAAGCTAAAATTTGAGGTGAATGAACGGGATGAAGGAG 2193
Query 2255 AGCTAGAACGAACAGGCGAGCCTTTATGTATTTATGAGATTTACAATGGCGCTGGGGCTT 2314
||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||
Sbjct 2194 AGCTAGAACGAACTGGCCAGCCTTTATGTATTTATGAGATTTACGATGGAGCTGGGGCTT 2253
Query 2315 GGCCCTTTCTGCATCATGGCTCTCTGTACCGTGGTTTGAGCCTGTCCAGCAAAGATCGAA 2374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2254 GGCCCTTTCTGCATCATGGCTCTCTGTACCGTGGTTTGAGCCTGTCCAGCAAAGATCGAA 2313
Query 2375 GGCTAAGCTCAGACGACGTAGATGCAGCAGACCGATTACCTCTACTGAATGATACCTATT 2434
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2314 GGCTAAGCTCAGACGATGTAGATGCTGCAGACCGATTACCTCTACTGAATGATACCTATT 2373
Query 2435 ATCGAGATATCCTTTGTGAAATTGGAGGAATGTTTTCTGTCGCAAATAAAGTGGATAGCA 2494
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2374 ATCGAGATATACTTTGTGAAATTGGAGGAATGTTTTCTGTCGCAAATAAAGTGGATAGCA 2433
Query 2495 TTCACATGAGACCTTGGATTGGATTTCAGTCATGGCGTGCTGCTGGTAGGAAGGTCTCGT 2554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2434 TTCACATGAGACCTTGGATTGGATTTCAGTCATGGCGTGCTGCTGGTAGGAAGGTCTCGT 2493
Query 2555 TATCATCTAAAGCTGAAGAGTCTCTGGAAAACATTATAAAGCAAGAAACAAAGGGGGAGA 2614
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 2494 TATCATCTAAAGCTGAAGAGTCCCTGGAAAACATTATAAAACAAGAAACAAAGGGGGAGA 2553
Query 2615 TTATTTACTTCTGGACAAGATTAGACATCGATGGTGATGCGTATGGAAGTAAAAATGCTC 2674
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct 2554 TTATTTACTTCTGGACAAGATTAGACATTGATGGTGATGCGTATGGAAGGAAAAATGCGC 2613
Query 2675 TTACATTCTGGTCTATGTGCGATATCCTTAACCAAGGAAACTGCAGAACCACTTTTGAAG 2734
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2614 TTACATTCTGGTCTATGTGTGATATCCTTAACCAAGGAAACTGCAGAACCACTTTTGAAG 2673
Query 2735 ATGCATTCCGGCATATGTATGGGTTACCAGAACACATTGAAGCGCTTCCTCCCATGCCTG 2794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2674 ATGCATTCCGGCATATGTATGGGTTACCAGAACACATTGAAGCGCTTCCTCCCATGCCTG 2733
Query 2795 AAGATGGTCATCACTGGTCTTCTCTCCACAATTGGGTGATGCCAACTCCGTCTTTCCTCG 2854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2734 AAGATGGTCATCACTGGTCTTCTCTCCACAATTGGGTGATGCCAACTCCGTCTTTCCTCG 2793
Query 2855 AGTTTGTCATGTTCTCAAGGATGTTCTCAGAGTCTCTAGATGCACTGCACAACAATCTTA 2914
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2794 AGTTTGTCATGTTCTCAAGGATGTTCTCCGAGTCTCTAGATGCACTGCACAACAATCTTA 2853
Query 2915 ACGACTCCAAAAGTTGCTCACTGGCTTCATCACTGCTCGAGAGAAAGCATTGTTACTGCC 2974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2854 ACGACTCCAAAAGTTGCTCACTGGCTTCATCACTGCTCGAGAGAAAGCATTGTTACTGCC 2913
Query 2975 GGGTTCTGGAACTGTTGGTTAATGTCTGGGCATATCATAGCGGGAGAAAGATGGTGTACA 3034
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2914 GGGTTCTGGAACTATTGGTTAATGTCTGGGCATATCATAGCGGGAGAAAGATGGTTTACA 2973
Query 3035 TAAACCCGAGAGATGGGTCACTCGAGGAACAACATCCGTTGCAGCAACGAAAAGGTTTAA 3094
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 2974 TAAACCCGAGAGATGGGTCACTCGAGGAACAACATCCGTTACCGCAACGAAAAGGTTTAA 3033
Query 3095 TGTGGGCAAAGTACTTTAACTTCACTTTACTGAAAAGCATGGATGAAGACTTAGCAGAAG 3154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3034 TGTGGGCAAAGTACTTTAACTTCACTTTACTGAAAAGCATGGATGAAGACTTAGCAGAAG 3093
Query 3155 CAGCAGATGATAAAGACCATCCAAGGGAAAGATGGCTATGGCCATTGACCGGAGAAGTAC 3214
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3094 CAGCAGATGATAAAGACCATCCAAGGGAAAGATGGCTATGGCCATTAACCGGAGAAGTAC 3153
Query 3215 ACTGGAAAGGCGTTTACGAGAGGGAACGTGAAGAAAGATACCGATTGAAAATGGACAAGA 3274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3154 ACTGGAAAGGCGTTTACGAGAGGGAACGTGAAGAAAGATACCGATTGAAAATGGACAAGA 3213
Query 3275 AGCGTAAAACTAAGGAGAAACTTTACGATAGGATAAAAAATGGTTACAAGCAGAAATCAC 3334
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3214 AGCGTAAAACTAAGGAGAAACTTTACGATAGGATCAAAAATGGTTACAAGCAGAAATCAC 3273
Query 3335 TTGGAGGATGAAAACAGAAATCTAGTTGCCTTGAGCGAACGGATTAACTCGGGCTCAGAC 3394
| |||||||||||||||| || || ||| |||||||||||||||||||||||| ||| |
Sbjct 3274 TGGGAGGATGAAAACAGAGATTTACTTGAGTTGAGCGAACGGATTAACTCGGGCGCAGTC 3333
Query 3395 TCGACGAAAGTTAATTCTTTTTTGACAGGGGGAAGCAAAACACATGAGAATCACACGAAG 3454
|||| |||||||||||||||||| | | | | | | ||||||| ||
Sbjct 3334 TCGATGAAAGTTAATTCTTTTTT-AT-G----A-G-A-------T-----TCACACGGAG 3373
Query 3455 ATCATCTAAAGCAAAGATTCTCACTGTTGCCATTTCTCTGGAGATTATAGGAGAAAGTTT 3514
|||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||
Sbjct 3374 ATCATCGAAAGCAAAGATTC--ACTCTTGCCATTTCTCTGGAGATTATAGGAGAGAGTTT 3431
Query 3515 AGAATTAGGAtttttttCTTCACCACTTAA-GTAAAGGTTTCCTTCG-GAACTCTCTTCG 3572
||| |||| ||||| |||||||||| |||| |||||||||||||| | |||||||||||
Sbjct 3432 AGATTTAGAATTTTATTCTTCACCA-TTAAAGTAAAGGTTTCCTT-GAGAACTCTCTTCT 3489
Query 3573 TTGCTTCAATATTTGAACTTAGTAAGAAACAAAAGCATTTAAGCTCTTAGCCACTGATTT 3632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3490 TTGCTTCAATATTTGAACTTAGTAAGAAACAAAAGCATTTAAGCTCTTAGCCACTGATTT 3549
Query 3633 AGGTTTCTATTTTTTAT-----CT-TT-CATGGTTTTTGTATATACACTATAG---TTTC 3682
|||||| | |||||| | || || |||||||||||||||||||||| | ||||
Sbjct 3550 AGGTTTTTTTTTTTTTTTTTTTCTCTTTCATGGTTTTTGTATATACACTACAACAATTTC 3609
Query 3683 ATTGGTTTCAGAATAAAAAGGCAATTTTGATGTTG 3717
|||||||||||||||||||||||||||||||||||
Sbjct 3610 ATTGGTTTCAGAATAAAAAGGCAATTTTGATGTTG 3644
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140470501943
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5