BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G04970.1
Length=2032
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487284 jgi|Araly1|487284|fgenesh2_kg.6__418__AT5G04970.1 2822 0.0
Ahg478407 jgi|Araly1|478407|fgenesh2_kg.3__1108__AT3G10720.2 1184 0.0
> Ahg487284 jgi|Araly1|487284|fgenesh2_kg.6__418__AT5G04970.1
Length=1979
Score = 2822 bits (1528), Expect = 0.0
Identities = 1860/2014 (92%), Gaps = 48/2014 (2%)
Strand=Plus/Plus
Query 4 TAGATAACAAGACGGAAGaaaaaaaaGCTTAG-AAAAAATGCAAACT---CA--T-TCTT 56
|||||||||||| ||||||||||||| ||||| ||||||||||| || || | ||||
Sbjct 1 TAGATAACAAGAAGGAAGAAAAAAAAACTTAGAAAAAAATGCAATCTCAACACTTCTCTT 60
Query 57 CATCTCTCGTGTTCTTGGCTCTTCTCTGTCTGTCATGGGCTTTACTAGTCTCACCAACAC 116
|||||||| |||||||||||||||||| ||| ||||||||||| ||||||| ||
Sbjct 61 CATCTCTCTTGTTCTTGGCTCTTCTCTCTCTTTCATGGGCTTTGCTAGTCT------CA- 113
Query 117 GTCCTCCGTCACAACCTCCATCACATCCTCCAATACAGCCTTCGTCACAGCCGCCAACAC 176
||| |||| ||||| | | | | | || ||| | | |||| |||||
Sbjct 114 -----CCGACACAGCCTCC-T--C--CGT-C-AT--GGCC-T-G-CACA------AACAC 150
Query 177 AGCCTCCGTCACAGCCACCAACGCAGCCTCCAACACAGCCTCCGTCACAT-CCACCAACA 235
||||||||||| | || ||||||| ||| || ||||| |||| || | | || || ||
Sbjct 151 AGCCTCCGTCAGAACCTCCAACGCCGCCCCCGTCACAGTCTCCATCGC-TGCCTCCTTCA 209
Query 236 CAGCCTCCAACACCGCCACCATCACAGTCTCCATCGCAGCCTTCTCCACTACCACCAAAC 295
|| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 210 CAACCTCCAACACCGCCTCCGTCACAGTCTCCATCGCAGCCTTCTCCACTACCACCAAAC 269
Query 296 ATCGCTTGTAAATCCACTCCTTACCCAAAGCTCTGCCGCACGATCCTCTCCGCCGTTAAA 355
|| ||||||||||||||||||||||| |||||||||||||||||||| ||||| || |||
Sbjct 270 ATTGCTTGTAAATCCACTCCTTACCCGAAGCTCTGCCGCACGATCCTTTCCGCTGTCAAA 329
Query 356 TCATCACCTTCCGATCCTTACCATTACGGAAAGTTCACAATGAAGCAATGCCTCAAACAA 415
|| ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 330 TCCTCACCGTCCGATCCTTACCGTTACGGAAAGTTCACAATGAAACAATGCCTCAAACAA 389
Query 416 GCTCGTCGCCTCTCCAAAGTCATCAACCGCTTTGCCCAGCGCGTGGAAGCTGATCCAGGT 475
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 390 GCTCGTCGCCTCTCCAAAGTCATCAACCGCTTTGCCCATCGCGTGGAAGATGATCCAGGT 449
Query 476 ACGTCGACGGTGGAAGAGGTCAGTGCGGTGGCTGATTGCGGTGAGCTAGCAGAGCTTAGC 535
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 450 GCGTCGACGGTGGAAGAGGTCAGTGCGGTGGCTGATTGCGGCGAGCTAGCACAGCTTAGC 509
Query 536 GTCGAATACCTTGAAACGGTTACGGAGGAGCTGAAAGCGGCGGAGCTGATGACGGCTGCG 595
|| || ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 510 GTTGATTACCTCGAAACGGTTACGGAGGAGCTGAAAGCAGCGGAGCTGATGACGGCCGCC 569
Query 596 CTCGTTGATCGTGTCACGAGTCTTCTCGGTGGCGTTGTGACTAATCAGCAGACGTGCCTC 655
|||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 570 CTCGTTGATCGTGTTACGAGTCTTCTCGGTGGCGTTGTGACTAACCAGCAAACGTGCCTC 629
Query 656 GACGGTCTTGTGGACGCTAAGAGCGGATTTGCGACGGCGATTGGAACGCCGTTAGGGAAT 715
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 630 GACGGTCTTGTGGACGCTAAGAGCGGGTTTGCGACGGCGATTGGAACGCCGTTGGGGAAT 689
Query 716 CTAACGCGCCTCTACAGTGTGTCGTTGGGGCTTGTGAGTCACGCGCTTAACCGTAATTTG 775
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 690 CTCACGCGCCTCTATAGTGTGTCGTTAGGGCTTGTGAGTCACGCGCTTAACCGTAATCTG 749
Query 776 AAGAGGTATAAAGGTTCCAAGGGGAAAATCTTTGGTGGTGGTAACAAACCCGTTCGTGAA 835
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 750 AAGAGGTATAAAGGGTCCAAGGGGAAAATCTTTGGTGGTGGTAACAAACCCGTTCGTGAA 809
Query 836 CCTCTCGAGACTTTGATTAAGGTTTTACGCAAAACATGCGACAAGGGCAAAGATTGTCGG 895
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 810 CCTCTCGAGACTTTGATTAAGGTTTTACGCAAAACATGCGACAAGAGCAAGGATTGTCGG 869
Query 896 AAAGCTAACAGAAATTTAGGTGAGCTAGGAGAGACGAGCGGTGGATCGATCCTCGTAAGG 955
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 870 AAAGCTGACAGAAATTTAGGTGAGCTAGGAGAGACGAGCGGTGGCTCGATCCTCGTAAGG 929
Query 956 GAAGCAGTGACCGTCGGTCCATATGAAACCGATAACTTCCCCACCATAACTGAGGCCGTT 1015
|||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 930 GAAGCAGTAACCGTCGGTCCATATGAAACCGATAACTTCTCTACCATAACTGAGGCCGTC 989
Query 1016 GCTGCCGCACCTAATCA-CACATTCCCGGAGCAAGGCTACTTCGTAATCTATGCAAGGGC 1074
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 990 GCTGCCGCACCTAA-CAACACATTCCCGGAGCAAGGCTACTTCGTAATCTATGCAAGGGC 1048
Query 1075 AGGTCTTTACGAAGAATATGTTGTCATTTCAAATaaaaaaaGAAACATAATGCTTATTGG 1134
|||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct 1049 AGGTCTTTACGAAGAATATGTTGTTATTTCAAATAAAAAAAGGAACATCATGCTTATTGG 1108
Query 1135 GGACGGAATCAATAAAACTATCATTTCTGGAAACCACAGTTTTATTGATGGTTGGACAAC 1194
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1109 AGATGGGATCAATAAAACTATCATTTCTGGAAACCACAGTTTTATTGATGGTTGGACGAC 1168
Query 1195 GTATAATTCTTCGACCTTTGCGGTGGTGGGAGACCGATTTGTTGCGGTTGATGTGACATT 1254
||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct 1169 TTATAATTCTTCAACCTTTGCGGTGGTCGGAGACCGATTTGTTGCAGTTGATGTAACATT 1228
Query 1255 CCGAAACACAGCTGGACCAGAGAAGCACCAGGCTGTGGCCGTAAGAAACAATGCGGATGG 1314
|||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 1229 CCGAAACACAGCTGGACCAGAGAAACACCAAGCCGTGGCCGTAAGAAACAATGCGGATGG 1288
Query 1315 ATCGACATTTTATCGATGTAGTTTTGAAGGCTATCAAGATACTCTTTACGTTCATTCTTT 1374
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1289 GTCAACATTTTATCGATGTAGTTTTGAAGGCTATCAAGATACTCTTTACGTTCATTCTTT 1348
Query 1375 GAGACAGTTCTATCGTGAATGTGATATATATGGGACCATAGATTTTATATTCGGAAATGC 1434
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1349 AAGACAGTTCTATCGTGAATGTGATATATATGGGACCATAGATTTTATATTCGGAAATGC 1408
Query 1435 AGCTGCCATATTTCAAAACTGCAACATATATGCCCGAAAACCGATGGCAAATCAGAAGAA 1494
||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1409 GGCTGCAATCTTTCAAAATTGCAACATATATGCCCGAAAACCGATGGCAAATCAGAAGAA 1468
Query 1495 TGCAGTGACAGCCCATGGAAGAACTGACCCAAACCAGAAAACTGGAATCTCCATCATTAA 1554
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1469 TGCAGTGACAGCCCATGGAAGAACCGATCCAAACCAGAAAACTGGAATCTCCATCATTAA 1528
Query 1555 TTGTACTATTGGAGCTGCCCCGGACCTCGCTGCTGACCCCAAGTCGACCATGACATTCCT 1614
||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1529 TTGTACTATAGGAGCTGCCCCGGACCTCGCGGCTGACCCCAACTCGACCATGACATTCCT 1588
Query 1615 TGGGCGGCCATGGAAGCCTTACTCGAGGACGGTCTACATACAATCATACATCAGCGATGT 1674
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1589 TGGGCGACCATGGAAGCCTTACTCGAGGACGGTCTACATACAATCATACATCAGCGATGT 1648
Query 1675 TGTCCAACCGGTAGGGTGGCTGGAATGGAATGGTACAACCGGGCTAGACACGATCTCCTA 1734
||||||||| || |||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1649 TGTCCAACCCGTTGGGTGGCTAGAGTGGAATGGGACAACCGGGCTAGACACGATCTCCTA 1708
Query 1735 TGGTGAATATGACAATTTTGGACCGGGGGCTGATACAAGTAAAAGGGTCCAATGGTCAGG 1794
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1709 TGGTGAATATGACAACTTTGGACCGGGGGCTGACACAAGTAAAAGGGTCCAATGGTCAGG 1768
Query 1795 ATATAGCCTATTGAACTTGGTACAAGCCATGAACTTCACCGTATATAATTTCACTTTGGG 1854
|||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||
Sbjct 1769 ATATAGCCTATTGAACTTGGCAGAAGCCATGAACTTCACCGTATATAACTTCACTTTGGG 1828
Query 1855 AGACACTTGGTTGCCTCAGACTGACATTCCCTTCTACGGCGGTTTGCTTCACACCGAATG 1914
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1829 AGACACTTGGTTGCCTCAGACCGACATTCCCTTCTACGGCGGTTTGCTTCACACCGAATG 1888
Query 1915 AAAATTTCTTAAAATATCATA--GATACTTGGTCTTGCCTCAATTTCAAATGCAATAAAA 1972
||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||
Sbjct 1889 AAAATTTCTTAAAATATTATATAGATACTTGGTCTTGCCTCA-TTT-AAATGCAATAAAA 1946
Query 1973 CATT--ATTCATTTTTGTTATTCGAAATCTAAAT 2004
||| |||||||||||||||||||||||| |||
Sbjct 1947 -ATTTTATTCATTTTTGTTATTCGAAATCTGAAT 1979
> Ahg478407 jgi|Araly1|478407|fgenesh2_kg.3__1108__AT3G10720.2
Length=1878
Score = 1184 bits (641), Expect = 0.0
Identities = 1321/1647 (80%), Gaps = 56/1647 (3%)
Strand=Plus/Plus
Query 297 TCGCTTGTAAATCCACTCCTTACCCAAAGCTCTGCCGCACGATCCTCT-CCGCCGTTAAA 355
|||||||||| || ||||| ||||| ||||||||||| |||||||| | ||| ||||||
Sbjct 260 TCGCTTGTAAGTCAACTCCATACCCTAAGCTCTGCCGTACGATCCT-TAACGCTGTTAAA 318
Query 356 TCATCACCTTCCGATCCTTACCATTACGG-AAAGTTCACAATGAAGCAATGCCTCAAACA 414
|| ||||| ||||||||||||| |||||| ||| ||||| || |||||||||||||||||
Sbjct 319 TCCTCACCGTCCGATCCTTACCGTTACGGCAAA-TTCACGATAAAGCAATGCCTCAAACA 377
Query 415 AGCTCGTCGCCTCTCCAAAGTCATCAACC-GCTT-TGCCCAGCGCGTG-GAAGCTGATCC 471
||| | || ||||||||||||||| ||| | || || | |||||| |||| | ||
Sbjct 378 AGCAAGCCGTCTCTCCAAAGTCATC-ACCAG-TTACGCGCTCCGCGTGAAAAGC-AAACC 434
Query 472 AGG-TACGTCGACGGTGGAAGAGGTCAGTGCGGTGGCTGATTGCGGTGAGCTAGCAGAGC 530
||| | || | |||| || || || | || | || || ||||| ||| || | ||||
Sbjct 435 AGGCTCCG-CCACGGCCGAGGAAATCGGCGCTCTAGCGGACTGCGGCGAGTTATCGGAGC 493
Query 531 TTAGCGTCGAA-TACCTTGAAACGGTTACGGA-GGAGCTGAAAGCGGCGGAGCTGATGAC 588
| || || ||| |||||||||| ||| || || |||||| ||| ||||| || |||||||
Sbjct 494 TGAGTGT-GAACTACCTTGAAATGGTCAC-GACGGAGCTCAAAACGGCGCAGGTGATGAC 551
Query 589 GGCTGCGCTCGTTGATCGTGT-CACGAGTCTTCTCGGTGGCGTTGTGACTAATCAGCAGA 647
||| || || || || | ||| || ||||||||| ||||||| ||||| ||||||||||
Sbjct 552 GGCAGCTCTAGTCGAGCATGTGAAC-AGTCTTCTCAGTGGCGTGGTGACGAATCAGCAGA 610
Query 648 CGTGCCTCGACGGTCTTGTGGACGCTAAGAGCGGATTTG-CGACGGCGATTGGAACGCCG 706
|||| || ||||| || | ||| || ||||| ||||| | || | |||||||| |||||
Sbjct 611 CGTGTCTTGACGGACTCGCGGAGGCGAAGAGTGGATTCGCCG-CCGCGATTGGGTCGCCG 669
Query 707 TTAGGGAATCTAACGCGCCTCTACAGTGTGTCGTTGGGGCTTGTGAGTCACGCGCTTAAC 766
| |||||||| ||||| || |||||| | ||||||||||||||||| |||||||||||
Sbjct 670 ATGGGGAATCTCACGCGACTTTACAGTATCTCGTTGGGGCTTGTGAGCCACGCGCTTAAT 729
Query 767 CGTAATTTGAAGAGGTATAAAGGTTCCAAGGGGAA-AATCTTTGGTGGTG-GTAAC-AAA 823
||||| | ||||||||||||| | | || ||||| | || ||||||||| | ||| ||
Sbjct 730 CGTAACCTAAAGAGGTATAAAGCTGCTAAAGGGAAGATTC-TTGGTGGTGCG-AACTCAA 787
Query 824 CCCGT-TCGTGAACCTCTCGAGACTTTGATTAAGGTTTTACGCAAAACATGCGACAAGGG 882
| | ||| ||||| ||||||||||| ||||||| |||||| |||||||||||||| |
Sbjct 788 --CATATCGCGAACCGCTCGAGACTTTAATTAAGGGTTTACGTAAAACATGCGACAACGA 845
Query 883 CAAAGATTGTCGGAAAGCTAACAGAAATTTAGGTGAGCTAGGAGAGACGAGCGGTGGATC 942
|||||||||||||||||||| | | || ||||| |||||||| |||||||||||||| ||
Sbjct 846 CAAAGATTGTCGGAAAGCTAGCCGGAACTTAGGGGAGCTAGGTGAGACGAGCGGTGGTTC 905
Query 943 GATCCTCGTAAGGGAAGCAGTGACCGTCGGTCCATATGAAA-CCGATAACTTCCCCACCA 1001
|||||||| || ||||||||| |||||| || || ||| |||| |||||| | ||||
Sbjct 906 CATCCTCGTGAGTAAAGCAGTGATCGTCGGCCCGTA-CAAATCCGACAACTTCACAACCA 964
Query 1002 TAACTGAGGCCGTTGCTGCCGCACCTAATCACACAT-TCCCGGAGCAAGGCTACTTCGTA 1060
| || || || |||| |||||||||||| |||| | || ||| | || ||||| ||
Sbjct 965 TCACCGATGCTATTGCAGCCGCACCTAATAACAC-TAGACCAGAGGATGGTTACTTTGTC 1023
Query 1061 ATCTATGCAAGGGCAGGTCTTTACGAAGAATATGTTGTCAT-TTCAAAT-aa-aaaaaGA 1117
||||| ||||| | |||| | || ||||||||| |||| | ||| || || ||||||
Sbjct 1024 ATCTACGCAAGAGAAGGTGTCTATGAAGAATATATTGT--TGTTCCCATCAACAAAAAG- 1080
Query 1118 AACATAATGCTTATTGGGGACGGAATCAATAAAACTATCATTTCTGGAAACCACAGTTTT 1177
||| ||||||||||||| || || |||||||| || || ||| |||| ||||| | ||
Sbjct 1081 AACTTAATGCTTATTGGAGATGGGATCAATAAGACGATTATTACTGGGAACCATAACGTT 1140
Query 1178 ATTGATGGTTGGACAACGTATAATT-CTTCGACCTTTGCGGTGGTGGGAGACCGATTTGT 1236
|||||||||||||||||||||||| | |||| |||||| ||||| ||||| || || |
Sbjct 1141 GTTGATGGTTGGACAACGTATAATTGC-TCGAGCTTTGCTGTGGTTGGAGAGCGGTTCAT 1199
Query 1237 TGCGGTTGATGTGACATTCCGAAACACAGCTGGACCAGAGAAGCACCAGGCTGTGGCCGT 1296
||||||||||| |||||| |||||||||| ||||| || || || ||||||||||| |
Sbjct 1200 GGCGGTTGATGTTACATTCAGAAACACAGCCGGACCTGAAAAACATCAGGCTGTGGCTTT 1259
Query 1297 AAGAAACAATGCGGATGGATCGACATTTTATCGATGTAGTTTTGAAGGCTATCAAGATAC 1356
|| |||||||| || ||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1260 GAGGAACAATGCAGAAGGATCGAGTTTTTATCGGTGTAGTTTTGAAGGCTATCAAGATAC 1319
Query 1357 TCTTTACGTTCATTCTTTGAGACAGTTCTATCGTGAATGTGATATATATGGGACCATAGA 1416
||| ||||| |||||| | ||||| |||||||||||||| ||||||||||| ||| | ||
Sbjct 1320 TCTCTACGTCCATTCTCTCAGACAATTCTATCGTGAATGCGATATATATGGTACCGTCGA 1379
Query 1417 TTTTATATTCGGAAATGCAGCTGCCATATTTC-AAAACTGCAACATATATGCCCGAAAAC 1475
||||||||||||||||||||| || || |||| |||| |||||||||||||| |||||||
Sbjct 1380 TTTTATATTCGGAAATGCAGCCGCAAT-TTTCCAAAATTGCAACATATATGCTCGAAAAC 1438
Query 1476 CGATGGCAAATCAGAAGAATGC-AGTGACAGCCCATGGAAGAACT-GACCCAAACCAGAA 1533
| ||||| || || ||||| || | | || || ||||||||| || || |||||||||||
Sbjct 1439 CAATGGCCAAGCAAAAGAACGCGA-TAACTGCTCATGGAAGA-CTCGATCCAAACCAGAA 1496
Query 1534 AACTGGAATCTCCATCATTAATTGTACTATTGGAGCTGCCCCGGACCTCGCTGCTGACCC 1593
|| |||||||| ||||| |||||||| || ||| ||||| || || || || || ||
Sbjct 1497 TACCGGAATCTCTATCATCAATTGTACAATAAAAGCCGCCCCAGATCTTGCAGCCGAGCC 1556
Query 1594 CAAGTC-GACCATGACATTCCTT-GGGCGGCCATGGAAGCCTTACTCGAGGACGGTCTAC 1651
|| || | ||||||||||| || ||| | ||||||||||| ||||| |||||||| | |
Sbjct 1557 TAAATCAG-CCATGACATTC-TTAGGGAGACCATGGAAGCCCTACTCAAGGACGGTTTTC 1614
Query 1652 ATACAATCATACATCAGCGATGTTGTCCAACCGGTAGGGTGGCTGGAATGGAATGGTACA 1711
|| |||||||| || || || |||||||||| || || |||||||||||||| ||||||
Sbjct 1615 ATGCAATCATATATTAGTGACATTGTCCAACCAGTTGGATGGCTGGAATGGAACGGTACA 1674
Query 1712 ACCGGGCTAGACACGATCTCCTATGGTGAATATGACAATTTTGGACCGGGGGCTGATACA 1771
|| || |||||||| |||| ||| ||||| || || || |||||||| |||||| | |||
Sbjct 1675 ACTGGACTAGACACAATCTACTACGGTGAGTACGATAACTTTGGACCAGGGGCT-A-ACA 1732
Query 1772 AGTAAA-AG-G-GTCCAATGGTCAGGATATAGCCTATTGAACTTGGTACAAGCCATGAAC 1828
| || || | || || |||| ||| |||| |||||||||||| | |||||||||||
Sbjct 1733 CG-AACCAGAGAGTGCAGTGGTTAGGGTATAATTTATTGAACTTGGCAGAAGCCATGAAC 1791
Query 1829 TTCACCGTATATAATTTCACTTTGGGAGACACTTGGTTGCCTCAGACTGACATTCCCTTC 1888
||||| || || || ||||| ||||||| || ||||||||||| || || ||||| |||
Sbjct 1792 TTCACGGTCTACAACTTCACCATGGGAGATACATGGTTGCCTCAAACCGATATTCCTTTC 1851
Query 1889 TACGGCGGTTTGCTTCACACCGAATGA 1915
|| || |||||||||| || ||||||
Sbjct 1852 TATGGTGGTTTGCTTCGCAAAGAATGA 1878
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76409031470
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5