BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G06740.1 Length=1959 Score E Sequences producing significant alignments: (Bits) Value Ahg892601 jgi|Araly1|892601|Al_scaffold_0006_597 3053 0.0 Ahg900529 jgi|Araly1|900529|Al_scaffold_0004_1179 2109 0.0 > Ahg892601 jgi|Araly1|892601|Al_scaffold_0006_597 Length=1965 Score = 3053 bits (1653), Expect = 0.0 Identities = 1865/1968 (95%), Gaps = 12/1968 (1%) Strand=Plus/Plus Query 1 ATGAGATTTTCTCTTGCGTGGAAGCTCCTGTTCTTGA---T-ACTA-A-CTTGTAAGATC 54 ||||||||||||||||||||||||||||||||||||| | |||| | |||||||| || Sbjct 1 ATGAGATTTTCTCTTGCGTGGAAGCTCCTGTTCTTGATTCTAACTATAGCTTGTAAGCTC 60 Query 55 GAGACACAAGTGAAGTGCTTAAAGTTCGATTTCCCTGGGTTTAATGTGAGCAATGAACTG 114 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| Sbjct 61 GAGACACAAGTGAAGTGCTTAGAGTTCAATTTCCCTGGGTTTAATGTGAGCAATGATCTG 120 Query 115 GAATTGATCCGAGATAACTCATACATTGTCTTTGGAGCAATCCAAGTGACTCCTGATGTT 174 || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 121 GACTTGATCCGAGACAACTCATACATTGTCCTTGGAGCAATCCAAGTGACTCCTGATGTT 180 Query 175 ACTGGTGGACCTGGTGGCACTATCGCAAACCAAGCAGGCAGAGCACTCTACAAAAAGCCT 234 | |||||| ||||||||| ||||||| |||||||| |||||||| || ||||| |||||| Sbjct 181 AGTGGTGGGCCTGGTGGCTCTATCGCCAACCAAGCGGGCAGAGCTCTATACAATAAGCCT 240 Query 235 TTCAGGCTATGGAGCAAACACAAGAGTGCTACTTTCAACACCACTTTCGTTATTAACATC 294 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 241 TTCAGGCTATGGAGCAAAGACAAGAATGCTACTTTCAACACCACTTTCGTTATTAACATC 300 Query 295 TCTAACAAAACCGATCCCGGAGGCGAAGGCTTAGCTTTCGTTCTCACACCCGAGGAGACT 354 || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 301 TCGAACAAAACCGATCCCGGAGGCGAAGGCTTAGCTTTCGTTCTCACACCCGAGAAGACC 360 Query 355 GCTCCTCAGAACAGCTCAGGTATGTGGCTCGGTATGGTCAACGAAAGAACAAATAGGAAT 414 ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| | || | Sbjct 361 GCTCCTCAGAACAGCTCAGGTATGTGGCTCGGTCTGGTCAATGAAAGGACAAACATGACT 420 Query 415 AAT-GAGTCGAGGATCGTTTCGGTTGAGTTCGACACAAGGAAGAGTCATTCGGATGATCT 473 | ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| | Sbjct 421 -CTCGAGTCGAGGATCGTTTCTGTTGAGTTCGACACAAGGAAGAGCCATCCGGATGATAT 479 Query 474 TGATGGAAACCATGTGGCTCTAAATGTGAACAACATCAATTCGGTTGTTCAAGAATCCTT 533 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 480 TGATGGAAACCATGTGGCTCTAAATGTGAACAACATCAATTCTGTTGTTCAAGAATCCTT 539 Query 534 GAGCGGTCGAGGGATCAAGATCGATTCCGGACTTGACTTAACCGCACATGTGCGGTATGA 593 ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 540 GAGTGGTCGAGGGATCAAGATCGATTCCGGAGTTGACTTAACCGCTCATGTGCGGTATGA 599 Query 594 TGGTAAGAATCTATCGGTTTATGTCTCAAGAAACTTGGATGTGTTTGAACAGAGGAACTT 653 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 600 TGGTAAGAATCTATCGGTTTATGTCTCTAGAAACTTGGAGGTGTTTGAACAGAGGAACTT 659 Query 654 AGTGTTTTCTAGGGCTATAGATCTCTCAGCCTATCTTCCGGAGACAGTTTATGTTGGATT 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 AGTGTTTTCTAGGGCTATAGATCTCTCAGCCTATCTTCCGGAGACAGTTTATGTTGGATT 719 Query 714 TACAGCTTCAACAAGCAATTTCACGGAGCTGAATTGTGTGAGATCATGGAGTTTTGAAGG 773 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 720 TACCGCTTCAACAAGCAATTTCACGGAGCTGAATTGTGTGAGATCATGGAGGTTTGAAGG 779 Query 774 TTTAAAGATCGATGGCGATGGAAACATGTTATGGCTCTGGATCACTATCCCTATAGTGTT 833 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 TTCAGAGATCGATGGCGATGGAAACATGTTATGGCTCTGGATCACTATCCCTATAGTGTT 839 Query 834 TATTGTTGGT-ATAGGAGCTTTCTTAGGAGCATTGTACTTGAGATCTAGGTCAAAGGCAG 892 | ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 840 TCTTGTT-GTAATAGGAGCTTTCTTAGGGGCATTGTACTTGAGATCTAGGTCAAAGGCAG 898 Query 893 GGGAAACAAATCCGGATATAGAAGCTGAGCTAGATAATTGCGCTGCAAATCCGCAGAAGT 952 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 899 GGGAAACAAATCCGGATATAGAAGCTGAGCTAGATAATTGCGCTGCAAACCCGCAGAAGT 958 Query 953 TCAAGCTGAGAGAGCTAAAGAGAGCAACAGGAAACTTCGGCGCGGAGAATAAACTAGGGC 1012 |||||||||||||||| |||||||||||||| |||||||||| |||||| ||||| |||| Sbjct 959 TCAAGCTGAGAGAGCTGAAGAGAGCAACAGGGAACTTCGGCGTGGAGAACAAACTCGGGC 1018 Query 1013 AAGGCGGGTTTGGGATGGTGTTTAAAGGGAAATGGCAGGGTAGAGACATAGCTGTGAAAC 1072 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1019 AAGGCGGGTTTGGGATGGTGTTTAAGGGGAAATGGCAGGGTAGAGACATAGCTGTGAAAC 1078 Query 1073 GAGTTTCCGAGAAATCGCATCAAGGGAAGCAAGAGTTTATAGCCGAGATCACAACTATTG 1132 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 1079 GAGTTTCCGAGAAATCGCATCAAGGGAAGCAAGAGTTTATAGCCGAGATCACAACGATCG 1138 Query 1133 GTAATCTGAATCATAGGAACCTGGTGAAGTTATTGGGATGGTGCTACGAGAGGAAGGAGT 1192 ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct 1139 GTAATCTGAATCATAGGAACCTGGTTAAATTATTGGGATGGTGCTACGAGAGAAAGGAGT 1198 Query 1193 ATCTTCTGGTTTATGAGTATATGCCTAACGGAAGCTTGGACAAATATCTTTTCTTGGAAG 1252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 ATCTTCTGGTTTATGAGTATATGCCTAACGGAAGCTTGGACAAATATCTTTTCTTGGAAG 1258 Query 1253 ACAAGTCAAGATCAAACCTAACATGGGAGACAAGGAAGAACATTATAACAGGGCTATCTC 1312 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1259 ATAAGTCAAGATCAAACCTAACATGGGAGACAAGGAAGAACATCATAACAGGGCTATCTC 1318 Query 1313 AAGCTTTGGAGTATCTTCACAATGGATGTGAGAAGAGGATACTTCACAGAGACATAAAAG 1372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1319 AAGCTTTGGAGTATCTTCACAATGGATGTGAGAAGAGGATACTTCACAGAGACATAAAGG 1378 Query 1373 CAAGCAACGTAATGCTGGACTCCGACTTCAACGCAAAGCTCGGCGACTTCGGGCTTGCGA 1432 |||||||||||||||| ||||| || |||||||| ||||||||||| ||||||||||||| Sbjct 1379 CAAGCAACGTAATGCTAGACTCGGATTTCAACGCCAAGCTCGGCGATTTCGGGCTTGCGA 1438 Query 1433 GGATGATTCAGCAAAGCGAAATGACACATCATTCGACCAAGGAGATCGCTGGAACACC-G 1491 |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | Sbjct 1439 GGATGATTCAGCAAAGCGAAATGACACACCATTCAACCAAGGAGATCGCTGGGACACCTG 1498 Query 1492 GGATACATGGCTCCTGAGACTTTTCTCAACGGGAGAGCCACAGTTGAAACAGATGTGTAT 1551 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 GG-TACATGGCTCCGGAGACTTTTCTCAACGGGAGAGCCACAGTTGAAACAGATGTGTAT 1557 Query 1552 GCGTTCGGAGTTCTAATGCTTGAAGTAGTCTCGGGGAAGAAACCAAGCTATGTCTTGGTC 1611 ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1558 GCGTTTGGAGTTCTAATGCTCGAAGTAGTCTCAGGGAAGAAACCTTGCTATGTCTTGGTC 1617 Query 1612 AAAGACAACCAGAACAATTACAACAATAGCATTGTGAATTGGCTATGGGAGCTATACAGA 1671 || || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1618 AAGGAGAACCAGAGCAATTACAACAATAGCATTGTGAATTGGCTATGGGAGCTATACAGA 1677 Query 1672 AATGGAACCATCACGGATGCTGCCGATCCGGGAATGGGAAATTTGTTCGATAAAGAAGAA 1731 |||| |||||||| |||||| || |||||||||||||||| ||||||||||||||||||| Sbjct 1678 AATGAAACCATCATGGATGCAGCGGATCCGGGAATGGGAAGTTTGTTCGATAAAGAAGAA 1737 Query 1732 ATGAAAAGCGTTTTGCTCTTAGGACTAGCTTGCTGCCACCCGAATCCGAACCAAAGACCG 1791 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1738 ATGAAAAGTGTTTTGCTCTTAGGACTCGCTTGCTGCCACCCGAATCCGAACCAAAGACCC 1797 Query 1792 TCCATGAAAACAGTGTTGAAGGTCTTGACGGGTGAGACTAGCCCACCGGATGTTCCTACA 1851 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1798 TCCATGAAAACGGTTTTGAAGGTCTTGACGGGTGAGACTAGCCCACCCGATGTTCCTACA 1857 Query 1852 GAGAGACCAGCTTTCGTGTGGCCAGCGATGCCTCCATCTTTCAGTGACATTGACTACTCT 1911 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1858 GAGAGACCGGCTTTCGTGTGGCCAGCAATGCCTCCATCTTTCAGTGACATTGACTACTCT 1917 Query 1912 CTTACAGGGAGTCAGATCAATTCACTTACGGAGCTTACTGGCAGATGA 1959 ||||||||||||||||||||||| ||||| |||||||||||| ||||| Sbjct 1918 CTTACAGGGAGTCAGATCAATTCCCTTACCGAGCTTACTGGCCGATGA 1965 > Ahg900529 jgi|Araly1|900529|Al_scaffold_0004_1179 Length=1950 Score = 2109 bits (1142), Expect = 0.0 Identities = 1718/1988 (86%), Gaps = 71/1988 (4%) Strand=Plus/Plus Query 1 ATGAGATTTTCTCTTGCGTGGAAGCTCCTGTTCTTGA---T-AC--TAACTTGTAAGATC 54 |||| || ||||| |||||| |||||||||||||||| | || |||||||||||||| Sbjct 1 ATGAAATATTCTCCTGCGTGCAAGCTCCTGTTCTTGATTCTAACTATAACTTGTAAGATC 60 Query 55 GAGACACAAGTGAAGTGCTTAAAGTTCGATTTCCCTGGGTTTAATGTGAGCAAT-GAACT 113 || ||||||||||||||| | |||||| ||||| || |||||| | | | | | ||||| Sbjct 61 GAAACACAAGTGAAGTGCATGAAGTTCAATTTCTCTAAGTTTAACG-GTG-ATTCGAACT 118 Query 114 GGAATTGATCCGAGA-TAACTCATACATTGTC-TTTGGAGCAATCCAAGTGACTCCTGAT 171 | | || | | | | |||| |||||| | |||| |||| |||||||||||||||| Sbjct 119 TG---T-AT-CTAAACT-ACTCCGACATTG-CTTTTGAAGCACTCCAAGTGACTCCTGAA 171 Query 172 GTTACTGGTGGACCTGGTGGCACTATCGCAAACCAAGCAGGCAGA-GCAC--TCTACAAA 228 | || |||| || | | ||||| | |||| | || || |||| ||||||| Sbjct 172 G---CTCGTGG---TGCT--C-CTATCACGAACCTCTC-GG--GACGCACGGTCTACAAG 219 Query 229 AAGCC-TTTCAGGCTATGGAGCAAACACAAG-AGTGCTACTTTCAACACCACTTTCGTTA 286 | || ||||||||||||||| ||| |||| | | ||||||| |||||||||||||||| Sbjct 220 GA-CCGTTTCAGGCTATGGAGAAAAGGCAAGAAAT-CTACTTTTAACACCACTTTCGTTA 277 Query 287 TTAACATCTCTAACAAAACCG-ATCCCGGAGGCGAAGGCTTAG-CTTTCGTTCTCACACC 344 |||||||| ||| |||||| || |||||||||||||||| |||| ||||||||||| Sbjct 278 TTAACATCAAGAACCAAACCGAAT-TTGGAGGCGAAGGCTTAGCCTTT-GTTCTCACACC 335 Query 345 CGAGGAG-ACTGCTCCTCAGAACAGCTCAGGTATGTGGCTCGG-TATGGTCAACGAAAGA 402 ||| || || | |||||| |||||||| |||||||||||||| | || | |||||||| Sbjct 336 TGAGAAGAAC-GTTCCTCAAAACAGCTCGGGTATGTGGCTCGGCT-TGATGAACGAAAGG 393 Query 403 ACAAATAGGAATAATGAGTCGAGGATCGTTTCGGTTGAGTTCGACACAAGGAAGAGTCAT 462 |||||| ||| | ||||||||||| ||| ||||||||||||||||||||||||| ||| Sbjct 394 ACAAATGGGACTCGCGAGTCGAGGATTGTTGCGGTTGAGTTCGACACAAGGAAGAGCCAT 453 Query 463 TCGGATGATCTTGATGGAAACCATGTGGCTCTAAATGTGAACAACATCAATTCGGTTGTT 522 | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 454 CCTGATGATCTTGATGGAAACCATGTGGGTCTAAATGTGAACAACATAAATTCGGTTGTT 513 Query 523 CAAGAATCCTTGAGCGGTCGAGGGATCAAGATCGATTCC-GGACTTGACTTAACCGCACA 581 |||||||| |||||| |||||||||||| |||| ||||| | | |||| || |||||||| Sbjct 514 CAAGAATCGTTGAGCAGTCGAGGGATCACGATCAATTCCAGTA-TTGATTTTACCGCACA 572 Query 582 TGTGCGGTATGATGGTAAGAATCTATCGGTTTATGTCTCAAGAAACTTGGATGTGTTTGA 641 ||| |||||||||||||||||||| ||||| ||||||||||||||| |||| || ||| Sbjct 573 TGTACGGTATGATGGTAAGAATCTTTCGGTATATGTCTCAAGAAACCTGGAGGTACATGA 632 Query 642 ACAGAGGAACTTAGTGTTTTCTAGGGCTATAGATCTCTCAGCCTATCTTCCGGAGACA-G 700 ||| | ||||| ||||||||| || |||||||||| |||||||||||||| |||| | | Sbjct 633 TCAGCGAAACTTGGTGTTTTCTTGGCCTATAGATCTATCAGCCTATCTTCCAGAGA-ATG 691 Query 701 TTTATGTTGGATTTACAGCTTCAACAAGCAATTTCACGGAGCTGAATTGTGTGAGATCAT 760 |||| |||||||||| |||||||||||| |||| ||| | ||||||||||||| ||||| Sbjct 692 TTTACATTGGATTTACGGCTTCAACAAGCGATTTTACGCAACTGAATTGTGTGAAATCAT 751 Query 761 GGAGTTTTGAAGGTTTAAAGATCGATGGCGAT-GGAA-ACAT-GTTATGG--C-TCTGGA 814 ||||||||||||||||| || ||||||| ||| | || | || ||| ||| | | |||| Sbjct 752 GGAGTTTTGAAGGTTTAGAGGTCGATGGAGATCGAAATATATGGTTGTGGTCCTTGTGGA 811 Query 815 TCACTATCCCTA-TAGTGTTTATTGTTGGT-ATAGGAGCTTTCTTAGGAGCATTGTACTT 872 ||| || ||||| | |||| | |||| || ||||||||||||||| | | | | ||||| Sbjct 812 TCATTACCCCTACT-GTGTGTGCTGTT-GTAATAGGAGCTTTCTTATGTGGACTATACTT 869 Query 873 GAGATCTAGGTCAAAGGCAGGGGAAACAAATCCGGATATAGAAGCTGAGCTAGATAATTG 932 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 870 AAGATCTAGGTCAAAGGCCGGGGAAACAAATCCGGATATAGAAGCTGAGCTAGATAATTG 929 Query 933 CGCTGCAAATCCGCAGAAGTTCAAGCTGAGAGAGCTAAAGAGAGCAACAGGAAACTTCGG 992 || |||| | ||||||||||||||||| |||||||| ||||||||||| ||||||||| | Sbjct 930 CGGTGCACACCCGCAGAAGTTCAAGCTAAGAGAGCTGAAGAGAGCAACGGGAAACTTCAG 989 Query 993 CGCGGAGAATAAACTAGGGCAAGGCGGGTTTGGGATGGTGTTTAAAGGGAAATGGCAGGG 1052 || |||||| ||||| ||||||||||||||||||||||||||||| ||||| ||| |||| Sbjct 990 CGTGGAGAACAAACTCGGGCAAGGCGGGTTTGGGATGGTGTTTAAGGGGAAGTGGGAGGG 1049 Query 1053 TAGAGACATAGCTGTGAAACGAGTTTCCGAGAAATCGCATCAAGGGAAGCAAGAGTTTAT 1112 |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 1050 TAGAGATATAGCTGTGAAACGAGTTTCCGAGAAATCGCGTCAAGGGAAGCAAGAGTTCAT 1109 Query 1113 AGCCGAGATCACAACTATTGGTAATCTGAATCATAGGAACCTGGTGAAGTTATTGGGATG 1172 | ||||||||| ||| || |||||||||||||||| |||| ||||||||||||||||||| Sbjct 1110 ATCCGAGATCAAAACGATCGGTAATCTGAATCATAAGAACTTGGTGAAGTTATTGGGATG 1169 Query 1173 GTGCTACGAGAGGAAGGAGTATCTTCTGGTTTATGAGTATATGCCTAACGGAAGCTTGGA 1232 |||||||||||| ||||||| |||||||||||| ||||| ||||| |||||||||||||| Sbjct 1170 GTGCTACGAGAGAAAGGAGTTTCTTCTGGTTTACGAGTACATGCCGAACGGAAGCTTGGA 1229 Query 1233 CAAATATCTTTTCTTGGAAGACAAGTCAAGATCAAACCTAACATGGGAGACAAGGAAGA- 1291 || |||| ||||| |||||||||||||||| |||||||||| ||||||||||||||| | Sbjct 1230 CAGATATGTTTTCGTGGAAGACAAGTCAAGTTCAAACCTAAAATGGGAGACAAGGAA-AC 1288 Query 1292 ACATTATAACAGGGCTATCTCAAGCTTTGGAGTATCTTCACAATGGATGTGAGAAGAGGA 1351 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1289 ACATTATAAGAGGGATATCTCAAGCTTTGGAGTATCTTCACAATGGATGTGAGAAGAGGA 1348 Query 1352 TACTTCACAGAGACATAAAAGCAAGCAACGTAATGCTGGACTCCGACTTCAACGCAAAGC 1411 ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 1349 TACTTCATAGAGACATAAAAGCAAGCAACGTAATGCTGGACTCGGATTTCAACGCAAAGC 1408 Query 1412 TCGGCGACTTCGGGCTTGCGAGGATGATTCAGCAAAGCGAAATGACACATCATTCGACCA 1471 | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 1409 TTGGCGATTTCGGGCTTGCGAGGATGATTCAGCAAAGCGAAATGACACACCATTCGACAA 1468 Query 1472 AGGAGATCGCTGGAACACCGGGATACATGGCTCCTGAGACTTTTCTCAACGGGAGAGCCA 1531 | ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1469 ATGAGATTGCTGGAACACCGGGATACATGGCTCCCGAGACTTTTCTCAACGGGAGAGCTA 1528 Query 1532 CAGTTGAAACAGATGTGTATGCGTTCGGAGTTCTAATGCTTGAAGTAGTCTCGGGGAAGA 1591 | |||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct 1529 CGGTTGAAACGGATGTGTATGCATTCGGAGTTCTAATGCTCGAAGTAGTCTCCGGGAAGA 1588 Query 1592 AACCAAGCTATGTCTTGGTCAAAG-ACAACCAGAACAATTACAACAATAGCATTGTGAAT 1650 ||| || ||||||||||| |||| | ||| ||| ||||||||| ||||||||||||||| Sbjct 1589 AACTGAGTTATGTCTTGGT-AAAGGAGAACGAGAGCAATTACAAGAATAGCATTGTGAAT 1647 Query 1651 TGGCTATGGGAGCTATACAGAAATGGAACCATCACGGATGCTGCCGATCCGGGAATGGGA 1710 |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| Sbjct 1648 TGGCTATGGGAGCTATACAGAAATGGAACCATAATGGATGCTGCGGATCCAAGAATGGGA 1707 Query 1711 AATTTGTTCGATAAAGAAGAAATGAAAAGCGTTTTGCTCTTAGGACTAGCTTGCTGCCAC 1770 | |||||| ||| ||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 1708 AGTTTGTTTGATGAAGAAGAGATGAAAAGCGTTTTGCTCTTAGGACTCGCTTGTTGCCAC 1767 Query 1771 CCGAATCCGAACCAAAGACCGTCCATGAAAACAGTGTTGAAGGTCTTGACGGGTGAGACT 1830 || |||||||||| |||||| ||||||||||| || |||||||||||||||||||| ||| Sbjct 1768 CCAAATCCGAACCTAAGACCTTCCATGAAAACTGTTTTGAAGGTCTTGACGGGTGAAACT 1827 Query 1831 AGCCCACCGGATGTTCCTACAGAGAGACCAGCTTTCGTGTGGCCAGCGATGCCTCCATCT 1890 |||||||| ||||| |||||||||||||| |||||||| ||||||| |||||||||||| Sbjct 1828 AGCCCACCCGATGTGCCTACAGAGAGACCGGCTTTCGTATGGCCAGTAATGCCTCCATCT 1887 Query 1891 TTCAGTGACATTGACTACTCTCTTACAGGGAGTCAG-ATCAATTCACTTACGGAGCTTAC 1949 || ||| |||||||||||||||||||||| ||| | || || || || ||||||| Sbjct 1888 TTTGGTGTTGTTGACTACTCTCTTACAGGGAGCCAGGA-CA-TT-AC---CG-AGCTTAC 1940 Query 1950 TGGCAGAT 1957 |||| ||| Sbjct 1941 TGGCCGAT 1948 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73628443585 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5