BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G06950.1
Length=1649
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487510 jgi|Araly1|487510|fgenesh2_kg.6__644__AT5G06950.1 2457 0.0
Ahg478587 jgi|Araly1|478587|fgenesh2_kg.3__1288__AT3G12250.4 1024 0.0
Ahg487514 jgi|Araly1|487514|fgenesh2_kg.6__648__AT5G06960.1 893 0.0
> Ahg487510 jgi|Araly1|487510|fgenesh2_kg.6__644__AT5G06950.1
Length=1623
Score = 2457 bits (1330), Expect = 0.0
Identities = 1555/1654 (94%), Gaps = 54/1654 (3%)
Strand=Plus/Plus
Query 1 GTCTCGGAGATTGGAATTTCGGATCGTGTCTCTCTCTG--T-TTCTTTGTTTCAATCCGA 57
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 1 GTCTCGGAGATTGGAATTTCGGATCGTGTCTCTCTCTGCTTCTTCTTTGTTTCAATCCGA 60
Query 58 TTTCGAATCAAGCCCTTTACTTGTGCACCTTC-AAGATTTCGTTTTTCCAGCGCAGCCAA 116
|| |||||||| |||||||||| ||| || || ||||||||||||||||||| |||||||
Sbjct 61 TTCCGAATCAAACCCTTTACTTCTGCTCC-TCAAAGATTTCGTTTTTCCAGCACAGCCAA 119
Query 117 TGCTCCGGGTGACCAACATTTGTTCCTGATTCATTTCCTATTGATTCGTATTGTCTGTGC 176
|| ||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 120 TGGTCCGGATGATCAACATTTGTTCTTGATTCATTTCCTATTGATTCTTATTGTCTGTGC 179
Query 177 ACAC-AAGAGAAATT-TCAAGAAGTTGTTACTAAAAGAGAGGCCACAAGTGGATATTGTC 234
|||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 ACACTAA-AG-AATTCTCAAGAAGTTGTTACTAAAAGAGAGGCCACAAGTGGATATTGTC 237
Query 235 TTTGTTATCAAGTGTTAGTACAGAAAAGTGGTGAGAAAGTAATATGGCTGATACCAGTCC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 TTTGTTATCAAGTGTTAGTACAGAAAAGTGGTGAGAAAGTAATATGGCTGATACCAGTCC 297
Query 295 GAGAACTGATGTCTCAACAGATGACGACACAGATCATCCTGATCTTGGGTCGGAGGGAGC 354
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 298 GCGAACTGATGTCTCAACAGATGAAGACACAGATCATCCTGATCTTGGGTCGGAGGGAGC 357
Query 355 ACTAGTGAATACTGCTGCTTCTGATTCGAGTGACCGATCGAAGGGAAAGATGGATCAAAA 414
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 358 ACTAGTGAATAATGCTGCTTCTGATTCGAGTGACCGATCGAAGGGCAAGATGGATCAAAA 417
Query 415 GACTCTTCGTAGGCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAA 474
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 GACCCTTCGTAGGCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAA 477
Query 475 GGCTTATGTTCAGCAGCTAGAGAACAGCCGCTTGAAACTAACCCAGCTTGAGCAGGAGCT 534
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 478 GGCGTATGTTCAGCAGCTGGAGAACAGCCGCTTGAAACTTACCCAGCTTGAGCAGGAGCT 537
Query 535 GCAAAGAGCAAGACAGCAGGGCGTCTTCATTTCAGGCACAGGAGACCAGGCCCATTCTAC 594
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct 538 GCAAAGAGCAAGACAGCAGGGCGTCTTCATTTCAAGCACAGGAGACCAAGCCCATGCTAC 597
Query 595 TGGTGGAAATGGTGCTTTGGCGTTTGATGCTGAACATTCACGGTGGTTGGAAGAAAAGAA 654
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 598 TGGTGGAAATGGTGCTTTGGCGTTTGATGCTGAACACTCACGGTGGCTGGAAGAAAAGAA 657
Query 655 CAAGCAAATGAACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCG 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 CAAGCAAATGAACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCG 717
Query 715 AATAATAGTCGATGGTGTGATGGCTCACTATGAGGAGCTTTTCAGGATAAAGAGCAATGC 774
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 718 AATAATAGTCGATGGTGTGATGGCTCACTATGAAGAGCTTTTCAGGATAAAGAGCAATGC 777
Query 775 AGCTAAGAATGATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAGAGATG 834
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 778 AGCTAAGAATGATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAAAGATG 837
Query 835 TTTCTTGTGGCTCGGTGGATTTCGTTCATCCGAACTTCTAAAGCTTCTGGCGAATCAGTT 894
|||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 838 TTTCTTGTGGCTTGGTGGCTTTCGTTCATCCGAACTTCTCAAGCTTCTGGCGAATCAGTT 897
Query 895 GGAGCCAATGACAGAGAGACAGTTGATGGGCATAAATAACCTGCAACAGACATCGCAGCA 954
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 898 GGAGCCAATGACAGAGAGACAGTTGATGGGCATAAATAACTTGCAACAGACATCGCAGCA 957
Query 955 GGCTGAAGATGCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCACTAGCTGATACTTT 1014
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 958 GGCTGAAGATGCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCTCTAGCTGATACTTT 1017
Query 1015 ATCGAGCGGGACTCTTGGTTCAAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGAT 1074
|||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct 1018 ATCGAGCGGGACTCTTGGTTCAAGCTCATCAGGGAATGTGGCGAGCTACATGGGTCAGAT 1077
Query 1075 GGCCATGGCAATGGGAAAGTTAGGTACACTCGAAGGATTTATCCGCCAGGCTGATAATTT 1134
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1078 GGCCATGGCAATGGGAAAGTTAGGTACCCTCGAAGGATTTATTCGCCAGGCTGATAATTT 1137
Query 1135 GAGACTACAAACATTGCAACAGATGATAAGAGTATTAACAACGA-GACAGTCAGCACGTG 1193
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||
Sbjct 1138 GAGACTACAAACATTGCAACAGATGATAAGAGTATTAACAAC-ACGACAGTCAGCGCGTG 1196
Query 1194 CTCTACTTGCAATACACGATTACTTCTCACGGCTACGAGCTCTAAGCTCCTTATGGCTTG 1253
||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1197 CTCTACTTGCAATTCATGATTACTTCTCACGGCTACGAGCTCTTAGCTCCTTATGGCTTG 1256
Query 1254 CTCGACCCAGAGAGTGAAACTGTATTTTGGTCAC-AT--GTCAGCTGTACAAAATCCATA 1310
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1257 CTCGACCCAGAGAGTGAAACTGTATTTTGGTCACTATCAGTCAGCTGTACAAAATCCATA 1316
Query 1311 TGG-ACACAAAACCAGGAGAGACTATTAATCAACACTTGTCAGA--TTCTTCTTACCAAA 1367
||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1317 TGGGACACAAA-CCAGGAGAGACTATTAATCAACACTTGTCAGAGATTCTTCTTACCAAA 1375
Query 1368 TCCATCAACAAATAAGCAAATTTCTGGGAAACAAAAGACTCTTTGTATGTAGGTTTCTTC 1427
||||||||||||||||||||||||||||||||||| | | ||
Sbjct 1376 TCCATCAACAAATAAGCAAATTTCTGGGAAACAAA----T-T--------------CT-- 1414
Query 1428 TACATGGTTGTGGTAATTCATGTTGTTTTAGTTGTAGTCATCAGTTTTTAATTTAGCATT 1487
|||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||
Sbjct 1415 -ACATGGTTGTGGTAATTCATGTTGTTTTAGCTGTAGCCTTCAGTTTTTAATTTAGCATT 1473
Query 1488 TGAAAAGTTCAATGTTGTTTATATAGCATCTTCGATTATCTTAGAAAGGTTATTGAATTT 1547
| |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1474 TAAAAAGTTCAATGTT-TATATAT--CATCTTCGATTATCTTAGAAAGGTTATTGAATTT 1530
Query 1548 T-Gttt-tttttt----GTTACTTTTGTGTGTGGTAAAGGTGTTTTAACCTTGCAACTTC 1601
| |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1531 TTGTTTGTTTTTTTTTTGTTACTTT-GTGTGTGGTAAAGGTGTTTTAACCTTGCAACTTC 1589
Query 1602 TGTACT-GTAATCAT--TT-AACAATATTAAGAT 1631
|||||| |||||||| || |||||||| |||||
Sbjct 1590 TGTACTTGTAATCATCATTTAACAATATAAAGAT 1623
> Ahg478587 jgi|Araly1|478587|fgenesh2_kg.3__1288__AT3G12250.4
Length=1047
Score = 1024 bits (554), Expect = 0.0
Identities = 796/913 (87%), Gaps = 16/913 (2%)
Strand=Plus/Plus
Query 366 CTGCTGCTTCTGATTCGAGTGACCGATCGAAGGGA-AAGATGGATCAAAAGACTCTTCGT 424
||||||| |||||||| ||||| ||||| || ||| ||||||||||||||||| ||||||
Sbjct 143 CTGCTGCATCTGATTCCAGTGATCGATC-AAAGGATAAGATGGATCAAAAGACCCTTCGT 201
Query 425 AGGCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAAGGCTTATGTT 484
|||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 202 AGGCTTGCTCAAAATCGTGAGGCAGCAAGAAAAAGCAGATTGAGGAAGAAAGCGTATGTT 261
Query 485 CAGCAGCTAGAGAACAGCCGCTTGAAA-CTAACCCAGCTTGAGCAGGAGCTGCAAAGAGC 543
|||||||| || || || || || ||| || || || |||||||||||||||||||||||
Sbjct 262 CAGCAGCTGGAAAATAGTCGATT-AAAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGC 320
Query 544 AAGACAGCAGGGCGTCTTCATTTCAGGCACAGGAGACCAGGCCCATTCTACTGGTGGAAA 603
||||||||||||||| ||||| ||| | |||||||||| || |||||||||||||||||
Sbjct 321 AAGACAGCAGGGCGTTTTCATCTCAAGTTCAGGAGACCAAGCTCATTCTACTGGTGGAAA 380
Query 604 TGGTGCTTTGGCGTTTGATGCTGAACATTCACGGTGG-TTGGAAGAAAAGAACAAGCAAA 662
||| |||||||| |||||||| ||||||||||| ||| ||| |||||||||||| |||||
Sbjct 381 TGGGGCTTTGGCATTTGATGCAGAACATTCACGATGGCTTG-AAGAAAAGAACAGGCAAA 439
Query 663 TGAACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCGAATAATAG 722
||||||||||||| ||||| |||||||| |||||||||||| ||||||| |||||||| |
Sbjct 440 TGAACGAGCTGAGATCTGCCCTGAATGCTCATGCAGGTGATACTGAGCTCCGAATAATTG 499
Query 723 TCGATGGTGTGATGGCTCACTATGAGGAGCTTTTCAGGATAAAGAGCAATGCAGCTAAGA 782
| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 500 TGGATGGAGTGATGGCTCACTATGAGGAGCTTTTCAGGATTAAGAGCAATGCAGCTAAGA 559
Query 783 ATGATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAGAGATGTTTCTTGT 842
|||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 560 ATGATGTCTTCCACTTGTTATCTGGAATGTGGAAAACTCCAGCTGAGAGATGTTTCTTGT 619
Query 843 GGCTCGGTGGATTTCGTTCATCCGAACTTCTAAAGCTTCTGGCGAATCAGTTGGAGCCAA 902
|||| || || || || |||||||||||||| |||||||| ||||||||| | ||||| |
Sbjct 620 GGCTTGGCGGGTTCCGCTCATCCGAACTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCA 679
Query 903 TGACAGAGA-GACAGTTGATGGGCATAAATAACCTGCAACAGACATCGCAGCAGGCTGAA 961
||||||| | ||||| | |||||| |||||| | |||| ||||| || |||||||| |||
Sbjct 680 TGACAGA-ACGACAGGTAATGGGCCTAAATAGCTTGCAGCAGACGTCCCAGCAGGCGGAA 738
Query 962 GATGCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCACTAGCTGATACTTTATCGAGC 1021
|||||||| ||||| ||||||||||| |||||||| || ||||||||||||||||| ||
Sbjct 739 GATGCTTTATCTCAGGGGATGGAGAGTTTACAACAATCCCTAGCTGATACTTTATCCAGT 798
Query 1022 GGGACTCTTGGTTCAAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGATGGCCATG 1081
|| ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||
Sbjct 799 GGAACTCTTGGTTCCAGTTCATCTGATAATGTCGCGAGCTACATGGGTCAGATGGCCATG 858
Query 1082 GCAATGGGAAAGTTAGGTACAC-TCGAAGGATTTATCCGCCAGGCTGATAATTTGAGACT 1140
|| ||||| ||||||| || | |||||||||| || || ||||||||||| || || ||
Sbjct 859 GCGATGGGGCAGTTAGGCAC-CGTCGAAGGATTCATACGGCAGGCTGATAACTTAAGGCT 917
Query 1141 ACAAACA-TTGCAACAGATGATAAGAGTATTAACAACGA-GACAGTCAGCACGTGCTCTA 1198
|||||| || ||||||||| | |||||||||||||| | | |||||||| ||||||||
Sbjct 918 GCAAACACTT-CAACAGATGCTTAGAGTATTAACAAC-ACGTCAGTCAGCTCGTGCTCTT 975
Query 1199 CTTGCAATACACGATTACTTC-TCACGGCTACGAGCTCTAAGCTCCTTATGGCTTGCTCG 1257
||||| ||||||||||| ||| || || |||| ||||| || ||||| |||||||| ||
Sbjct 976 CTTGCTATACACGATTA-TTCATCTCGATTACGTGCTCTTAGTTCCTTGTGGCTTGCCCG 1034
Query 1258 ACCCAGAGAGTGA 1270
|| |||||||||
Sbjct 1035 GCCAAGAGAGTGA 1047
> Ahg487514 jgi|Araly1|487514|fgenesh2_kg.6__648__AT5G06960.1
Length=1463
Score = 893 bits (483), Expect = 0.0
Identities = 849/1022 (83%), Gaps = 40/1022 (4%)
Strand=Plus/Plus
Query 270 AAAGTAATATGGCTGATACCAGTCCGAGAAC-TGATGTCTCAACAGAT-GACGACACAGA 327
|||| || |||| ||||| ||||| ||||| | | |||||||||||| || || |||||
Sbjct 295 AAAGAAAAATGGGAGATACTAGTCCAAGAACATCA-GTCTCAACAGATGGA-GAGACAGA 352
Query 328 TCATCCTGATCT--TGGGTCG--GAGGGAGCACTAGTGAATACTGCTGCTTCTGATTCGA 383
|||| | | || | | ||| || || ||| | || || || |||||||||||| |
Sbjct 353 TCATAATAACCTAAT-GTTCGATGAAGG-GCA-T-TTGGGTATTGGTGCTTCTGATTCTA 408
Query 384 GTGACCGATCGAAG-GGAAAGATGGATCAAAAGACTCTTCGTAGGCTTGCTCAAAACCGT 442
||||||| || ||| | ||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct 409 GTGACCGTTCAAAGAGTAAA-ATGGATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGT 467
Query 443 GAGGCAGCAAGGAAAAGCAGATTGAGGAAGAAGGCTTATGTTCAGCAGCTAGAGAACAGC 502
||||| |||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct 468 GAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGCAGCTAGAGAATAGC 527
Query 503 CGCTTGAAACTAACCCAGCTTGAGCAGGAGCTGCAAAGAGCAAGACAGCAGGGCGTCTTC 562
|| ||||| |||| || |||||||||||||||||||||||||| || ||||| |||||
Sbjct 528 CGATTGAAGTTAACACAACTTGAGCAGGAGCTGCAAAGAGCAAGGCAACAGGGTGTCTTT 587
Query 563 ATTTCAGGCACAGGAGACCAGGCCCATTCTACTGGTGGAAATGGTGCTTTGGCGTTTGAT 622
|| ||| || | |||||||| ||||||||||| |||| |||| || |||| ||||||
Sbjct 588 ATCTCAAGCTCTGGAGACCAAGCCCATTCTACCACTGGAGATGGGGCAATGGCATTTGAT 647
Query 623 GCTGAACATTCACGGTGGTTGGAAGA-AAAGAACAAG-CAAATGAACGAGCTGAGGTCTG 680
|| ||| | ||| ||| |||||| ||| ||| || || ||||| |||||||| ||||
Sbjct 648 GCAGAATACAGACGATGGCAGGAAGATAAA-AAC-AGACAGATGAAGGAGCTGAGTTCTG 705
Query 681 CTCTGA-ATGCGCATGCAG-GTGATTCTGAGCTTCGAATAATAGTCGATGGTGTGATGGC 738
|| | | || | || || | ||||||||||||||| ||||| || ||||| || || ||
Sbjct 706 CT-TTAGATTCTCACGC-GACTGATTCTGAGCTTCGGATAATTGTAGATGGAGTAATAGC 763
Query 739 TCACTATGAGGAGCTTTTCAGGAT-AAAGAGCAATGCAGCTAAGAATGATGTCTTTCACT 797
||||||||||||||||| |||||| |||| |||| |||||||||||||||||||| || |
Sbjct 764 TCACTATGAGGAGCTTTACAGGATAAAAG-GCAACGCAGCTAAGAATGATGTCTTCCATT 822
Query 798 TGCTATCTGGCATGTGGAAAACACCAGCTGAGAGATGTTTCTTGTGGCTCGGTGGATTTC 857
| |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 823 TATTATCGGGGATGTGGAAAACACCAGCTGAGAGATGTTTCTTGTGGCTCGGTGG-TTTC 881
Query 858 -GTTCATCCGAACTTCTAAAGCTTCTGGCGAATCAGTTGGAGCCAATGACAGAGAGA-CA 915
||||||| |||||||| |||||| | ||||||||||||||||| ||||||| | | ||
Sbjct 882 CGTTCATCAGAACTTCTCAAGCTTATAGCGAATCAGTTGGAGCCGTTGACAGA-ACAACA 940
Query 916 GTTGA-TGGGCATAAATAACCTGCAACAGACATCGCAGCAGGCTGAAGATGCTTTGTCTC 974
| | | | |||||||||| |||||||| | || || || || ||||||||||||||||
Sbjct 941 ATC-ACTAGACATAAATAACTTGCAACAGTCTTCTCAACAAGCAGAAGATGCTTTGTCTC 999
Query 975 AAGGGATGGAGAGCTTACAACAGTCACTAGCTGATACTTTATCGAGCGGGACTCTTGGTT 1034
|||||||||| | |||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct 1000 AAGGGATGGATAACTTACAGCAATCACTCGCTGATACTTTATCGAGCGGGACTCTCGGTT 1059
Query 1035 CAAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGATGGCCATGGCAATGGGAAAGT 1094
| ||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||
Sbjct 1060 CGAGTTCATCAGGGAATGTAGCTGGCTACATGGGTCAGATGGCCATGGCTATGGGGAAGT 1119
Query 1095 TAGGTACACTCGAAGGATTTATCCGCCAGGCTGATAATTTGAGACTACAAACAT-TGCAA 1153
||||||| || |||||||||||||||||||||||||| || || |||||||||| | |||
Sbjct 1120 TAGGTACTCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGCTACAAACATAT-CAA 1178
Query 1154 CAGATGATAAGAGTATTAACAACGAGACAGTCAGCACGTGCTCTACTTGCAATACACGAT 1213
|| ||| ||||| |||||||||| |||| || || |||||||| || ||| ||||| ||
Sbjct 1179 CAAATGGTAAGAATATTAACAACCCGACAATCGGCGCGTGCTCTCCTAGCAGTACACAAT 1238
Query 1214 TACTTC-TCACGGCTACGA-GCTCTAAGCTC-CTTATGGCTTGCTC-GACCCAGAGAGTG 1269
|| ||| | ||| ||| | ||||| ||||| || ||||||||| | |||| ||||||||
Sbjct 1239 TA-TTCATTGCGGTTAC-ACGCTCTTAGCTCTCT-ATGGCTTGC-CAGACCAAGAGAGTG 1294
Query 1270 AA 1271
||
Sbjct 1295 AA 1296
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61820467635
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5