BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G07180.1 Length=3305 Score E Sequences producing significant alignments: (Bits) Value Ahg940170 jgi|Araly1|940170|scaffold_600714.1 4512 0.0 Ahg496399 jgi|Araly1|496399|fgenesh2_kg.8__2215__AT5G62230.1 2525 0.0 > Ahg940170 jgi|Araly1|940170|scaffold_600714.1 Length=2942 Score = 4512 bits (2443), Expect = 0.0 Identities = 2784/2950 (94%), Gaps = 17/2950 (1%) Strand=Plus/Plus Query 166 TGAGgaagaagaagaagaagatgagaagGATAGAGACCATGAAAGGCTTGtttttttGTC 225 ||||||||| ||| |||| ||| ||||| | | || ||||||||||| ||||| || Sbjct 1 TGAGGAAGAGGAATAAGACGAT--GAAGG-T-G-GA-GTTGAAAGGCTTGGTTTTTGGTT 54 Query 226 TGGGGATGGT-GGTTTTCATGCTACTTGGTTCTGTTTCTCCAATG---AACAACGAAGGA 281 ||| ||| || |||||||||||||| |||| ||||||||||||| |||||||||||| Sbjct 55 TGGTGAT-GTCTGTTTTCATGCTACTCGGTTTTGTTTCTCCAATGAACAACAACGAAGGA 113 Query 282 AAAGCGTTGATGGCGATAAAGGCTTCATTCAGCAACGTGGCGAATATGCTTCTTGATTGG 341 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 114 AAAGCGTTGATGGCGATAAAAGCCTCATTCAGCAACGTGGCGAATATGCTTCTTGATTGG 173 Query 342 GACGATGTTCATAACCACGACTTTTGTTCTTGGAGAGGTGTCTTCTGTGATAACGTTAGC 401 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 174 GACGATGTTCACAACAACGACTTTTGTTCTTGGAGAGGTGTCTTCTGTGATAACGTTAGC 233 Query 402 CTCAATGTTGTCTCTCTTAATCTGTCAAACCTGAATCTTGGTGGAGAGATATCATCTGCC 461 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct 234 CTCTCCGTTGTCTCTCTTAATCTGTCAAATCTGAATCTTGGTGGGGAGATATCATCAGCC 293 Query 462 CTTGGAGATTTGATGAATCTGCAATCAATAGACTTGCAAGGAAATAAATTGGGTGGTCAA 521 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 294 CTTGGAGATTTGAGGAATCTGCAGTCAATAGACTTGCAAGGAAATAAATTGGGTGGTCAA 353 Query 522 ATTCCAGATGAGATTGGAAACTGTGTTTCTCTTGCTTATGTGGATTTCTCCACCAATTTG 581 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct 354 ATTCCAGATGAGATTGGAAACTGTGCTTCTCTTGCTTATGTGGATTTCTCCACTAATTCA 413 Query 582 TTGTTTGGAGACATACCGTTTTCAATCTCTAAACTCAAACAGCTGGAGTTTCTGAACCTA 641 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 414 TTGTTTGGAGACATACCGTTTTCAATCTCTAAACTCAAACAGCTGGAGTTTCTGAACCTG 473 Query 642 AAGAATAATCAGCTCACTGGTCCAATACCAGCAACCTTAACTCAGATTCCAAACCTTAAG 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 AAGAATAATCAGCTCACTGGTCCAATACCAGCAACCTTAACTCAGATTCCAAACCTTAAG 533 Query 702 ACCCTTGACCTCGCAAGAAACCAGCTTACTGGTGAGATACCAAGGTTACTCTACTGGAAT 761 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 534 ACCCTTGACCTTGCAAGAAACCAGCTAACTGGTGAGATTCCAAGGTTACTCTACTGGAAT 593 Query 762 GAAGTTTTACAGTATCTCGGTTTACGTGGGAATATGTTAACTGGGACATTGTCTCCTGAT 821 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 594 GAAGTTTTACAGTATCTTGGTTTACGTGGGAATATGTTAACTGGGACATTGTCTCCTGAT 653 Query 822 ATGTGTCAGCTGACGGGTCTGTGGTACTTTGATGTGAGAGGCAACAACCTTACTGGAACT 881 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 654 ATGTGTCAGCTTACGGGTCTGTGGTACTTTGATGTGAGAGGCAACAACCTAACTGGAAGT 713 Query 882 ATCCCAGAGAGCATTGGCAATTGCACAAGCTTTGAGATCTTGGATGTATCTTATAATCAG 941 ||||| || | ||||||||| || ||||||||||| ||| |||||||||||||||||||| Sbjct 714 ATCCCTGATAACATTGGCAACTGTACAAGCTTTGAAATCCTGGATGTATCTTATAATCAG 773 Query 942 ATTACCGGAGTTATACCCTACAATATTGGTTTCCTCCAAGTAGCTACTCTGTCACTTCAA 1001 ||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct 774 ATTACTGGAGTAATACCCTACAATATCGGTTTCCTCCAAGTTGCTACTCTATCACTTCAA 833 Query 1002 GGAAACAAGTTGACTGGCAGAATTCCGGAAGTGATTGGTCTGATGCAGGCTCTTGCTGTA 1061 ||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 834 GGAAACAGGTTAACTGGTAGAATTCCAGAAGTGATTGGTCTGATGCAGGCTCTTGCTGTT 893 Query 1062 TTGGATTTGAGTGACAATGAATTAACTGGGCCTATTCC-ACCAATACTTGGGAATCTGTC 1120 |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| || Sbjct 894 TTGGATTTGAGTGACAATGAATTAACTGGGCCTA-TCCTACCAATACTTGGGAATCTCTC 952 Query 1121 ATTCACTGGAAAACTGTATCTCCATGGCAACAAGCTCACTGGACAAATCCCACCCGAGCT 1180 ||||||||||||||||||||||||||| |||||| |||| |||||||| ||||| ||||| Sbjct 953 ATTCACTGGAAAACTGTATCTCCATGGTAACAAGTTCACCGGACAAATTCCACCTGAGCT 1012 Query 1181 AGGCAATATGTCACGACTCAGCTATTTGCAACTAAATGATAATGAACTAGTGGGAAAGAT 1240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1013 TGGCAATATGTCACGACTCAGCTATTTGCAACTAAATGATAATGAACTAGTGGGAAACAT 1072 Query 1241 CCCACCTGAGCTTGGGAAGCTGGAACAATTGTTCGAACTGAATCTTGCGAACAACAATCT 1300 ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| Sbjct 1073 CCCACCTGAGCTTGGGAAGCTGGAACAATTGTTCGAACTGAATCTCGCAAACAACTATCT 1132 Query 1301 TGTAGGGCTGATTCCATCTAACATTAGTTCCTGTGCTGCCTTGAATCAATTCAATGTTCA 1360 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1133 TGTAGGGCCAATTCCATCTAACATTAGTTCCTGTGCCGCCTTGAATCAATTCAATGTGCA 1192 Query 1361 TGGGAACTTCTTGAGTGGAGCTGTACCACTTGAATTCCGGAATCTTGGAAGCTTGACTTA 1420 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1193 TGGGAACTTCCTGAGTGGATCTATACCACTTGAATTCCGGAATCTTGGAAGCTTGACTTA 1252 Query 1421 TCTAAATCTTTCCTCAAACAGTTTCAAGGGCAAAATACCTGCTGAGCTTGGCCATATCAT 1480 ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1253 TCTGAATCTTTCTTCAAACAGTTTCAAGGGCAAAATACCTGCTGAGCTTGGCCATATTAT 1312 Query 1481 CAATCTTGATACATTGGATCTGTCTGGCAACAATTTCTCAGGCTCAATTCCATTAACACT 1540 ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1313 CAATCTTGACACATTGGATCTGTCTGGCAACAATTTCTCAGGGTCAATACCATTAACACT 1372 Query 1541 TGGTGATCTTGAGCATCTTCTCATCTTAAACTTGAGCAGAAATCATCTGAATGGCACATT 1600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1373 TGGTGATCTTGAGCATCTTCTCATCTTAAACTTGAGCAGAAATCATCTCAATGGGACATT 1432 Query 1601 GCCTGCAGAATTCGGGAACCTCCGAAGCATTCAGATCATCGATGTGTCATTTAATTTTCT 1660 ||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1433 GCCTGCAGAGTTTGGGAACCTCCGAAGCATTCAGATCATCGATGTATCATTCAATTTTCT 1492 Query 1661 TGCCGGTGTTATTCCAACTGAACTTGGCCAGTTGCAGAACATAAACTCTCTGATACTGAA 1720 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 1493 TGCCGGTGTTATTCCAACAGAACTTGGCCAGTTGCAGAACATAAACTCTATGATACTGAA 1552 Query 1721 CAACAACAAGATTCATGGGAAAATCCCTGATCAGCTAACTAACTGCTTCAGTCTTGCCAA 1780 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1553 CAACAACAAGATTCATGGGAAAATCCCTGATCAGCTAACTAATTGCTTCAGTCTTGCCAA 1612 Query 1781 TCTGAACATCTCCTTCAATAATCTTTCTGGAATAATCCCACCTATGAAGAACTTTACACG 1840 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 1613 TCTGAACATCTCCTTCAATAATCTATCTGGAATAATCCCACCTATGAAGAACTTTTCACG 1672 Query 1841 TTTTTCCCCGGCCAGCTTCTTTGGAAATCCATTTCTCTGCGGGAACTGGGTTGGATCAAT 1900 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1673 TTTTGCCCCGGCCAGCTTCTTTGGAAATCCATTTCTCTGCGGGAACTGGATTGGATCAAT 1732 Query 1901 CTGTGGCCCATCTTTACCTAAGTCACAAGTATTCACCAGAGTTGCCGTGATTTGTATGGT 1960 ||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||| Sbjct 1733 CTGTGGCCCATCTTTGCCCAAGTCTCGAGTATTCACCAGAGTTGCCGTGATTTGTATGGT 1792 Query 1961 TCTCGGTTTCATCACTCTCATATGCATGATATTCATTGCGGTTTACAAGTCAAAGCAGCA 2020 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1793 TCTCGGTTTCATCACTCTCATATGCATGATATTCATTGTGGTTTACAAGTCAAAGCAGCA 1852 Query 2021 GAAACCAGTCTTGAAAGGCTCTTCAAAACAACCTGAAGGGTCAACGAAGCTGGTGATTCT 2080 |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1853 GAAACCAGTCGCGAAAGGCTCTTCAAAACAACCTGAAGGGTCAACAAAGCTGGTGATTCT 1912 Query 2081 TCACATGGACATGGCTATTCACACGTTTGATGATATCATGAGAGTTACAGAAAACCTCGA 2140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1913 TCACATGGACATGGCTATTCACACGTTTGATGATATCATGAGAGTTACAGAAAACCTC-A 1971 Query 2141 -TGAGAAATACATCATTGGATACGGTGCTTCTAGCACAGTTTACAAGTGCACCTCCAAAA 2199 |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1972 GTGAGAAATACATCATTGGATACGGCGCTTCTAGCACGGTTTACAAGTGCACCTCCAAAA 2031 Query 2200 CTTCCCGACCTATTGCCATTAAGCGAATCTACAATCAGTATCCCAGCAACTTCCGCGAGT 2259 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 2032 GTTCCCGACCTATTGCCATTAAGCGAATCTACAATCAGTATCCCAACAACTTCCGTGAGT 2091 Query 2260 TTGAAACAGAGCTCGAGACCATTGGGAGCATCAGACACAGAAACATAGTAAGCTTGCACG 2319 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2092 TTGAGACAGAGCTCGAGACCATTGGCAGCATCAGACACAGAAACATAGTAAGCTTGCACG 2151 Query 2320 GATACGCCTTATCTCCCTTTGGCAACCTCCTCTTCTACGACTACATGGAAAATGGCTCTC 2379 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2152 GATACGCCTTGTCTCCCTTTGGCAACCTCCTCTTCTACGACTACATGGAAAATGGCTCTC 2211 Query 2380 TTTGGGATCTTCTCCATGGGCCTGGGAAGAAGGTGAAGCTTGACTGGGAAACAAGGCTGA 2439 ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 2212 TTTGGGATCTTCTCCATGGGCCTGGGAAGAAAGTGATGCTTGACTGGGAAACAAGGCTGA 2271 Query 2440 AGATAGCTGTTGGAGCTGCGCAAGGACTTGCATATCTTCACCATGACTGCACACCTAGGA 2499 |||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 2272 AGATTGCAGTTGGAGCTGCACAAGGACTTGCATATCTTCACCATGACTGCACTCCTAGGA 2331 Query 2500 TAATCCATCGAGACATCAAGTCATCAAACATACTCCTTGATGGGAATTTCGAAGCGCGTT 2559 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2332 TAATCCATCGGGACATCAAGTCATCAAACATACTCCTTGATGGGAATTTTGAAGCGCGTT 2391 Query 2560 TGTCAGATTTTGGGATTGCCAAGAGCATACCAGCCACCAAAACTTATGCTTCAACCTATG 2619 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 2392 TGTCAGATTTTGGGATTGCCAAGAGCATACCAGCTACCAAAACTTATGCGTCAACCTATG 2451 Query 2620 TTCTTGGAACCATTGGATATATTGACCCAGAGTATGCTCGAACTTCGCGTCTGAACGAGA 2679 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2452 TTCTTGGAACCATTGGCTATATTGACCCAGAGTATGCTAGAACTTCGCGTCTGAACGAGA 2511 Query 2680 AGTCTGATATCTACAGTTTCGGTATTGTCCTTCTTGAGCTTCTAACCGGCAAGAAGGCTG 2739 |||||||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct 2512 AGTCTGATATCTACAGCTTCGGTATTGTCCTTCTTGAGCTTCTGACTGGGAAGAAGGCTG 2571 Query 2740 TGGATAACGAGGCCAACTTGCATCAAATGATTCTATC-AAAGGCGGATGATAACACAGTA 2798 | ||||||||||||||||||||||||||||| || || |||| | |||||||| ||||| Sbjct 2572 TAGATAACGAGGCCAACTTGCATCAAATGATACTGTCGAAAG-CAGATGATAATACAGTG 2630 Query 2799 ATGGAAGCTGTTGATGCAGAGGTCTCAGTGACTTGCATGGACTCAGGACACATCAAGAAA 2858 ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct 2631 ATGGAAGCTGTTGATGCAGAGGTTTCAGTGACGTGCATGGATTCAGGGCACATCAAGAAG 2690 Query 2859 ACATTTCAGCTAGCTCTCTTGTGCACCAAGCGAAATCCTTTGGAGAGACCCACCATGCAG 2918 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 2691 ACATTTCAGCTAGCCCTCTTGTGCACCAAGCGAAACCCTTTGGAGAGGCCCACAATGCAG 2750 Query 2919 GAGGTCTCTAGGGTTCTGCTCTCACTTGTCCCGTCTCCACCTCCAAAGAAGTTACCGTCG 2978 ||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||| || Sbjct 2751 GAGGTCTCTAGGGTTCTGCTCTCTCTTCTCCCATCTCCACCTCCAAAAAAGTTACCTTCT 2810 Query 2979 CCTGCAAAAGTACAGGAAGGGGAAGAACGGCGTGAGAGCCACTCTTCAGATACAACAACC 3038 ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2811 CCTGCGAAACTGCAGGAAGGGGAAGAACGACGTGAGAGCCACTCTTCAGATACAACAACT 2870 Query 3039 CCACAGTGGTTTGTTCAGTTCCGTGAAGATATCTCCAAAAGTAGCTTATAAGATAATAAC 3098 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2871 CCACAGTGGTTTGTTCAGTTCCGTGAAGATATCTCCAAAAGTAGCTTATAAGATACTAAC 2930 Query 3099 TTTTAGGGTT 3108 |||||||||| Sbjct 2931 TTTTAGGGTT 2940 > Ahg496399 jgi|Araly1|496399|fgenesh2_kg.8__2215__AT5G62230.1 Length=3268 Score = 2525 bits (1367), Expect = 0.0 Identities = 2309/2761 (84%), Gaps = 75/2761 (3%) Strand=Plus/Plus Query 231 ATGGTGG-TTTTCATGCTACTTGGT-TCTGTTTCTCCAATGAACAACGAAGGAAAAGCGT 288 ||||||| ||||| |||| |||||| | || |||| | |||||||||||||| ||||| | Sbjct 213 ATGGTGGTTTTTC-TGCTTCTTGGTGT-TGCTTCTTCTATGAACAACGAAGGGAAAGCTT 270 Query 289 TGATGGCGAT-AAAGGCTTCATTCAGCAACGTGGCGAATATGCTTCTT-GATTGGGACGA 346 |||||||||| |||||| || ||||||||| | | |||||||||| || ||||||||||| Sbjct 271 TGATGGCGATAAAAGGC-TCTTTCAGCAACTTAGTGAATATGCTT-TTGGATTGGGACGA 328 Query 347 TGTTCATAACCA-CGACTTTTGTTCTTGGAGAGGTGTCTTCTGTGATAACGTTAGCC-TC 404 |||||| || || ||||| ||||||||||||||||||| ||| || ||||||| || || Sbjct 329 TGTTCACAA-CAGTGACTTCTGTTCTTGGAGAGGTGTCTACTGCGACAACGTTA-CCTTC 386 Query 405 AATGTTGTCTCTCTTAATCTGTCAAACCTGAATCTTGGTGGAGAGATATCAT-CTGCCCT 463 |||||||| || |||||||||| ||||||||||| || |||||||| | | || | Sbjct 387 TCCGTTGTCTCGCTGAATCTGTCAAGTCTGAATCTTGGAGGGGAGATATC-TCCAGCTAT 445 Query 464 TGGAGATTTGAT-GAATCTGCAATCAATAGACTTGCAAGGAAATAAATTGGGTGGTCAAA 522 ||||||| | || |||| || |||||||||||||||||||||||||||||| |||||||| Sbjct 446 TGGAGATCT-ATGGAATTTGGAATCAATAGACTTGCAAGGAAATAAATTGGCTGGTCAAA 504 Query 523 TTCCAGATGAGATTGGAAACTGTGTTTCTCTTGCTTATGTGGATTTCTCC-ACCAATTTG 581 | || ||||||||||||||||||| |||||||| |||| ||||||| || | ||| || Sbjct 505 TCCCTGATGAGATTGGAAACTGTGCTTCTCTTGTTTATCTGGATTTGTCTGAT-AATCTG 563 Query 582 TTGTTTGGAGACATACCGTTT-TCAATCTCTAAACTCAAACAGCTGGAGTTTCTGAACCT 640 || | ||| |||||||| ||| ||||||||||||||||| ||||| || |||||| || Sbjct 564 TTATATGGTGACATACC-TTTCTCAATCTCTAAACTCAAGCAGCTTGAAACTCTGAATCT 622 Query 641 AAAGAATAATCAGCTCACTGGTCCAATACCAGCAACCTTAACTCAGATTCCAAACCTTAA 700 ||||| ||||||||||| || ||| ||||||| |||||||| ||||||||||||||||| Sbjct 623 GAAGAACAATCAGCTCACAGGCCCAGTACCAGCGACCTTAACCCAGATTCCAAACCTTAA 682 Query 701 GACCCTTGACCTCGCAAGAAACCAGCTTACTGGTGAGATACCAAGGTTACTCTACTGGAA 760 || ||||| || || | || || || || ||||||||| | || || || |||||||| Sbjct 683 GAGACTTGATCTTGCTGGCAATCATCTAACGGGTGAGATATCGAGATTGCTTTACTGGAA 742 Query 761 TGAAGTTTTACAGTATCTCGGTTTACGTGGGAATATGTTAACTGGGACATTGTCTCCTGA 820 ||||||||| ||||||||||||||||||||||||||||| ||||| || || ||| |||| Sbjct 743 TGAAGTTTTGCAGTATCTCGGTTTACGTGGGAATATGTTGACTGGAACGTTATCTTCTGA 802 Query 821 TATGTGTCAGCTGACGGGTCTGTGGTACTTTGATGTGAGAGGCAACAACCTTACTGGAAC 880 |||||||||||| || ||| | |||||||||||||||||||| || || || |||||||| Sbjct 803 TATGTGTCAGCTAACCGGTTTATGGTACTTTGATGTGAGAGGAAATAATCTAACTGGAAC 862 Query 881 TATCCCAGAGAGCATTGGCAATTGCACAAGCTTTGAGATCTTGGATGTATCTTATAATCA 940 ||||| ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||| Sbjct 863 AATCCCTGAGAGCATTGGAAATTGCACAAGCTTTCAAATCCTGGACATATCTTATAATCA 922 Query 941 GATTACCGGAGTTATACCCTACAATATTGG-TTTCCTCCAAGTAGCTACTCTGTCACTTC 999 ||| || |||| || || ||||| || || |||| ||||||| |||||||||||||||| Sbjct 923 GATAACTGGAGAGATTCCTTACAACATCGGCTTTC-TCCAAGTTGCTACTCTGTCACTTC 981 Query 1000 AAGGAAACA-AGTTGACTGGCAGAATTCCGGAAGTGATTGGTCTGATGCAGGCTCTTGCT 1058 ||||||||| | |||||||| |||||||| ||||| || ||||| ||||||||||||||| Sbjct 982 AAGGAAACAGA-TTGACTGGTAGAATTCCAGAAGTTATAGGTCTAATGCAGGCTCTTGCT 1040 Query 1059 GTATTGGATTTGAGTGACAATGAA-TTAACTGGGCCTATTCCACCAATACTTGGGAATCT 1117 || |||||||||||||| ||||| || ||| ||||| ||||| |||||||| ||||| Sbjct 1041 GTTTTGGATTTGAGTGATAATGAGCTTGT-TGGTCCTATACCACCGATACTTGGCAATCT 1099 Query 1118 GTCATTCACTGGAAAACTGTATCTCCATGGCAACAAGCTCACTGGACAAATCCCACCCGA 1177 || || || ||||| |||||||||||||||| ||||||||||| | ||||||| | || Sbjct 1100 CTCGTTTACCGGAAAGTTGTATCTCCATGGCAATAAGCTCACTGGTCCAATCCCATCTGA 1159 Query 1178 GCTAGGCAATATGTCACGACTCAGCTATTTGCAACTAAATGATAATGAACTAGTGGGAAA 1237 ||| || ||||||||||| |||||||||||||| |||||||| ||| ||||||| |||| Sbjct 1160 GCTTGGGAATATGTCACGTCTCAGCTATTTGCAGCTAAATGACAATAAACTAGTCGGAAC 1219 Query 1238 GATCCCACCTGAGCTTGGGAAGCTGGAACAATTGTTCGAACTGAATCTTGCGAACAACAA 1297 || |||||||||||||| |||||||| |||||||| ||| |||||||||| |||||| Sbjct 1220 TATTCCACCTGAGCTTGGTAAGCTGGAGCAATTGTTTGAATTGAATCTTGCCAACAACCG 1279 Query 1298 TCTTG-TAGGGCTGATTCCATCTAACATTAGTTCCTGTGCTGCCTTGAATCAATTCAATG 1356 | ||| |||||| || ||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct 1280 T-TTGGTAGGGCCCATACCATCCAACATTAGTTCATGTGCAGCCTTGAATCAATTCAATG 1338 Query 1357 TTCATGGGAACTTCTTGAGTGGAGCTGTACCACTTGAATTCCGGAATCTTGGAAGCTTGA 1416 ||||||||||| |||| |||||| || ||||||| | || || ||||| || || |||| Sbjct 1339 TTCATGGGAACCTCTTAAGTGGATCTATACCACTGGCGTTTCGCAATCTCGGGAGTTTGA 1398 Query 1417 CTTATCTAAATCTTTCCTCAAACAGTTTCAAGGGCAAAATACCTGCTGAGCTTGGCCATA 1476 |||||||||||||||| || |||| ||||||||| |||||||| | ||||||||| |||| Sbjct 1399 CTTATCTAAATCTTTCGTCGAACAATTTCAAGGGGAAAATACCAGTTGAGCTTGGACATA 1458 Query 1477 TCATCAATCTTGATACATTGGATCTGTCTGGCAACAATTTCTCAGGCTCAATTCCATTAA 1536 | ||||||||||| | | | |||||||||||||| || |||||||| || || ||||||| Sbjct 1459 TAATCAATCTTGACAAACTAGATCTGTCTGGCAATAACTTCTCAGGGTCTATACCATTAA 1518 Query 1537 CACTTGGTGATCTTGAGCATCTTCTCATCTTAAA-CTTGAGCAGAAA-TCATCTGAATGG 1594 | |||||||||||||| || |||||||| ||||| || |||||||| | |||| | ||| Sbjct 1519 CGCTTGGTGATCTTGAACACCTTCTCATATTAAATCTA-AGCAGAAACT-ATCTTAGTGG 1576 Query 1595 CACA-TTGCCTGCAGAATTCGGGAACCTCCGAAGCATTCAGATCATCGATGTGTCATTTA 1653 ||| ||||||||||| || || ||||| |||||||||||||| || ||||| ||||| | Sbjct 1577 -ACAATTGCCTGCAGAGTTTGGAAACCTTCGAAGCATTCAGATGATTGATGTATCATTCA 1635 Query 1654 AT-TT-TCTTGCCGGTGTTATTCCAACTGAACTTGGCCAGTTGCAGAACATAAACTCTCT 1711 || || ||| |||| ||||||||||||||||||||||| |||||||| |||||||| | Sbjct 1636 ATCTTATCT--CCGGAGTTATTCCAACTGAACTTGGCCAATTGCAGAATTTAAACTCTTT 1693 Query 1712 GATACTGAACAACAACAAGATTCATGGGAAAATCCCTGATCAGCTAACTAACTGCTTCAG 1771 ||| ||||| |||||||| ||||||||||||| || |||||||| || || || ||| | Sbjct 1694 AATATTGAACTACAACAAGCTTCATGGGAAAATTCCAGATCAGCTTACGAATTGTTTC-G 1752 Query 1772 -TCTTGCCAATCTGAACATCTCCTTCAATAATCTTTCTGGAATAATCCCACCTATGAAGA 1830 ||||| ||||||||| |||||||||| ||||| || || ||||||||||| ||||| | Sbjct 1753 CTCTTGTCAATCTGAATGTCTCCTTCAACAATCTCTCAGGGATAATCCCACCAATGAAAA 1812 Query 1831 ACTT-TACACGTTTTTCCCCGGCCAGCTTCT-TTGGAAATCCATTTCTCTGCGGGAACTG 1888 |||| | |||||||| | || |||||||| | |||||||||||| || || || ||||| Sbjct 1813 ACTTCT-CACGTTTTGCTCCAGCCAGCTT-TGTTGGAAATCCATACCTTTGTGGAAACTG 1870 Query 1889 GGTTGGATCAATCTGTGGCCCATCTTTACCTAAGTCACAAGTATTCACCAGAGTTGCCGT 1948 ||||||||| || || || || | || || || || | ||||||| |||||| ||| || Sbjct 1871 GGTTGGATCTATATGCGGTCC-T-TTG-CCGAAATCCCGAGTATTCTCCAGAGGTGCTGT 1927 Query 1949 GATTTGTATGGTTCTCGGTTTCATCACTCTCATATGCATGATATTCATTGCGGTTTACAA 2008 ||| || || ||||| ||| ||||||||||| |||| ||||| ||| | || |||||||| Sbjct 1928 GATCTGCATTGTTCTTGGTGTCATCACTCTCCTATGTATGATTTTCCTCGCAGTTTACAA 1987 Query 2009 GTCAAAGCAGCAGAA-ACCAGTCTTGAAAGGCTCTTCAAAACAA-CCTGAAGGGTCAACG 2066 || ||||||||||| | | ||| ||| ||| | ||||||||| || ||||| ||||| Sbjct 1988 ATCGAAGCAGCAGAAGAAGATTCTAGAA-GGCCCCTCAAAACAAGCC-GAAGGCTCAACC 2045 Query 2067 AAGCTGGTGATTCTTCACATGGACATGGCTATTCACACGTTTGATGATATCATGAGAGTT 2126 ||||| |||||||| |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct 2046 AAGCTAGTGATTCTCCACATGGACATGGCAATTCATACATTTGATGATATAATGAGAGTA 2105 Query 2127 ACAGAAAACCTC-GATGAGAAA-TACATCATTGGATACGGTGCTTCTAGCACAGTTTACA 2184 || || || || | ||| ||| | || |||||||||||||||||||| || || |||| Sbjct 2106 ACCGAGAATCTTAG-TGA-AAAGTTTATAATTGGATACGGTGCTTCTAGTACGGTATACA 2163 Query 2185 A--GTGCACCTCCAAAACTTCCCGACCTATTGCCATTAAGCGAATCTACAATCAGTATCC 2242 | ||||| | |||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 2164 AATGTGCAT-TG-AAAAGTTCCCGACCTATTGCCATTAAGCGACTCTACAATCAGTATCC 2221 Query 2243 -CAGCAACTTCCGCGAGTTTGAAACAGAGCTCGAGACCATTGGGAGCATCAGACACAGAA 2301 || ||||| || || ||||| ||||| ||||||||||| ||||||||||| ||||| | Sbjct 2222 GCAT-AACTTGCGGGAATTTGAGACAGAACTCGAGACCATAGGGAGCATCAGGCACAGGA 2280 Query 2302 ACATAGTAAGCTTGCACGGATACGCCTTATCTCCCT-TTGGCAACCTCCTCTTCTACGAC 2360 ||||||| |||||||| ||||| ||||| ||||| | |||||||||| || ||||| ||| Sbjct 2281 ACATAGTCAGCTTGCATGGATATGCCTTGTCTCC-TATTGGCAACCTTCTTTTCTATGAC 2339 Query 2361 TACATGGAAAATGGCTCTCTTTGGGATCTTCTCCATGGG-C-CTGGGAAGAAGGTGAAGC 2418 |||||||||||||| || |||||||| ||||| ||||| | ||| ||||| ||||||| Sbjct 2340 TACATGGAAAATGGATCACTTTGGGACCTTCTTCATGGTTCACTG--AAGAAAGTGAAGC 2397 Query 2419 TTGACTGGGAAACAAGGCTGAAGATAGCTGTTGGAGCTGCGCAAGGACTTGCATATCTTC 2478 |||| ||||| || ||| |||||||||| |||||||||||||||||||| || ||||||| Sbjct 2398 TTGATTGGGAGACGAGGTTGAAGATAGCGGTTGGAGCTGCGCAAGGACTCGCCTATCTTC 2457 Query 2479 ACCATGACTGCACACCTAGGATAATCCATCGAGACATCAAGTCATCAAACATACTCCTTG 2538 ||||||| || || ||| |||| || || ||||||||||||||||| |||||||| |||| Sbjct 2458 ACCATGATTGTACTCCTCGGATTATTCACCGAGACATCAAGTCATCGAACATACTTCTTG 2517 Query 2539 ATGGGAATTTCGAAGCGCGTTTGTCAGATTTTGGGATTGCCAAGAGCATACCAGCCACCA 2598 ||| |||||||||||| | ||| || |||||||||||||| |||||||||||||| | || Sbjct 2518 ATGAGAATTTCGAAGCACATTTATCGGATTTTGGGATTGCTAAGAGCATACCAGCGAGCA 2577 Query 2599 AAACTTATGCTTCAACCTATGTTCTTGG-AACCATTGGATATATTGACCCAGAGTATGCT 2657 ||||| ||||||| || |||||| |||| ||| ||||| ||||| ||||||||||||||| Sbjct 2578 AAACTCATGCTTCGACTTATGTT-TTGGGAACAATTGGTTATATAGACCCAGAGTATGCT 2636 Query 2658 CGAACTTCGCGTCTGAACGAGAAGTCTGATATCTACAGTTTCGGTATTGTCCTTCTTGAG 2717 || ||||||||||| || ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct 2637 CGTACTTCGCGTCTCAATGAGAAATCTGATATCTACAGCTTCGGGATTGTTCTTCTTGAG 2696 Query 2718 CTTCTAACCGGCAAGAAGGCTGTGGATAACGAGGCCAACTTGCATCAAATGAT-TCTATC 2776 ||||| || || ||||| || || |||||||| || |||||||||||| |||| | | || Sbjct 2697 CTTCTTACTGGAAAGAAAGCAGTAGATAACGAAGCTAACTTGCATCAACTGATAT-TGTC 2755 Query 2777 AAAGGCGGATGATAACACAGTAATGGAAGCTGTTGATGCAGAGGTCT-CAGTGACTTGCA 2835 |||||| |||||||| || || |||||||| |||||| ||||||| | | ||||| || | Sbjct 2756 AAAGGCTGATGATAATACTGTGATGGAAGCAGTTGATCCAGAGGT-TACGGTGACATGTA 2814 Query 2836 TGGACTCAGGACACATCAAGAAA-ACATTTCAGCTAGCTCTCTTGTGCACCAAGCGAAAT 2894 |||| | ||||| |||| |||| ||||||||||| |||||||| ||||| |||||||| Sbjct 2815 TGGATTTGGGACATATCA-GAAAGACATTTCAGCTGGCTCTCTTATGCACAAAGCGAAAC 2873 Query 2895 CCTTTGGAGAGACCCACCATGCAGGAGGTCTCTAGGGTTCTGCTCTCACTTGTCCCGTCT 2954 ||||| ||||||||||| |||| || |||||||||||||||||||| ||| | || ||| Sbjct 2874 CCTTTAGAGAGACCCACAATGCTTGAAGTCTCTAGGGTTCTGCTCTCCCTTCTTCCATCT 2933 Query 2955 C 2955 | Sbjct 2934 C 2934 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 124752724294 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5