BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G07660.1
Length=3177
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487601 jgi|Araly1|487601|fgenesh2_kg.6__735__AT5G07660.1 4878 0.0
Ahg496305 jgi|Araly1|496305|fgenesh2_kg.8__2121__AT5G61460.1 2713 0.0
Ahg914130 jgi|Araly1|914130|Al_scaffold_0001_4384 732 0.0
> Ahg487601 jgi|Araly1|487601|fgenesh2_kg.6__735__AT5G07660.1
Length=3192
Score = 4878 bits (2641), Expect = 0.0
Identities = 3034/3215 (94%), Gaps = 61/3215 (2%)
Strand=Plus/Plus
Query 1 ATGGATGAACATGGCGACCATCGACAGAGTAATCCTTTCAACGATCAACAAACTAGCTCG 60
||||||||||||||| | ||| |||||||||||| ||||||||||||| | |||||||
Sbjct 1 ATGGATGAACATGGC-A--ATCAACAGAGTAATCCCTTCAACGATCAACGACCTAGCTCC 57
Query 61 GGTAAAATCCTTAGGATTCGCCTTGAGAATTTCATGTGCCACAGTAATCTCGAGATTGAG 120
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 GGTACGATCGTTAGGATTCGCCTTGAGAATTTCATGTGCCACAGTAATCTCGAGATTGAG 117
Query 121 TTTGGCGATTGGGTCAATTTCATCACTGGTCAAAACGGAAGTGGTAAGAGTGCGATATTG 180
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 118 TTTGGCGATTGGGTCAATTTCATCACTGGCCAAAACGGAAGTGGTAAGAGTGCGATTTTG 177
Query 181 ACTGCTCTATGTGTTGCCTTTGGATGTCGAGCCAGGGGAACTCAGCGCGCCGCTACGTTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 178 ACTGCTCTATGTGTTGCCTTTGGATGTCGAGCCAGGGGAACTCAGCGCGCCGCTACGCTA 237
Query 241 AAAGATTTCATTAAAACTGGATGCAGCTATGCCCTTGTTTATGTCGAACTGAAAAACCAA 300
|||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 238 AAAGATTTCATTAAAAATGGATGCAGTTATGCCCTTGTTCATGTCGAACTGAAAAACCAA 297
Query 301 GGAGAGGATGCTTTCAAGCCTGAAATATATGGTGATACTCTGATTATTGAACGCAGGATC 360
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 GGAGAGGATGCTTTTAAGCCTGAAATATATGGTGATACTCTGATTATTGAACGCAGGATA 357
Query 361 TCTGATTCCACTAGTTTAACGGTTCTCAAGGATCATCAAGGAAGAAAAATATCTAGCCGA 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 TCTGATTCTACTAGTTTAACGGTTCTCAAGGATCATCAAGGAAGAAAAATATCTAGCCG- 416
Query 421 AAG-GAGGAGCTACGGGAACTAGTTGAACATTATAATATTGATGTTGAGAATCCCTGTGT 479
||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 417 AAGAGAGGAGCTACGGCAACTTGTTGAACATTATAATATTGATGTTGAGAATCCCTGTGT 476
Query 480 GATAATGAGTCAAGACAAGAGCAGGGAGTTCTTACATTCTGGTAACGACAAAGATAAATT 539
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 477 GATAATGAGTCAAGACAAGAGCAGGGAGTTCTTACATTCTGGAAACGACAAAGACAAATT 536
Query 540 CAAGTTCTTTTATAAAGCAACCCTTCTTCAGCAAGTCGATGATATTCTTCAAAGTATTGG 599
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 537 CAAGTTCTTTTATAAAGCAACCCTTCTCCAGCAAGTCGATGATCTTCTTCAAAGTATTGG 596
Query 600 TACAAAGTTGAATTCTGCAAATGCTCTTTTGGATGAGATGGAGAAGACCATAAAACCAAT 659
|| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 597 CACTAAGTTGAAATCTGCAAATGCTCTTATGGATGAGATGGAGAAGACCATAAAACCAAT 656
Query 660 AGAAAAGGAGATCAATGAGTTGCTTGAAAAGATAAAGAATATGGAACATGTTGAAGAAAT 719
| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 657 ACAAAAGGAGATCAGTGAATTGCTTGAAAAGATAAAGAATATGGAACATGTTGAAGAAAT 716
Query 720 AACTCAACAGGTTCTGCATTTGAAAAAGAAACTAGCTTGGTCATGGGTATATGATGTGGA 779
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 717 AACTCAACAGGTTCTGCATTTGAAAAATAAACTAGCTTGGTCATGGGTATATGATGTGAA 776
Query 780 TAGGCAGCTCAAGGAGCAGAATGAGAAGATCGTGAAATTCAAAGAACGAGTGCCAACTTG 839
||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct 777 TAGGCAGCTCATGGAGCAGAATGAGAAGATCGTGAAACTCAGAGAACGAGTGCCTACTTG 836
Query 840 TCAAAATAAAATTGATCGGAAACTGGGTGAGGTGGAATCTTTAAGGGTAAGCTTAACCGA 899
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 837 TCAAAATAAAATTGATCGGAAACTGGGTGAGGTGGAGTCTTTAAGGGTAAGCTTGACCGA 896
Query 900 GAAGAAAGCTCAAGTTGCCTGCTTGATAGATGAGTCAACTGCGATGAAGAGAGAGCTAGA 959
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 897 GAAGAAAGCTCAAGTTGCCTGCCTGATAGATGAATCAACTGCGATGAAGAGAGAGCTAGA 956
Query 960 GTGTTTGCGGCAATCAATGAAGAAGGCTGCAAGAGAGAAGATTGCTTTAGAAGAAGAATA 1019
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 957 GTGTTTGCGGCAATCAATGAAGAAGGCTGCTAGAGAGAAGATTGCTTTAGAAGAAGAATA 1016
Query 1020 CCATCATAAGTGCAGTAACATTCAGAAGATTAAGGATCGTGTTAGGAGGCTTGAACGACA 1079
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 CCATCATAAGTGCAATAACATTCAGAAGATTAAGGATCGTGTTAGGAGGCTTGAACGACA 1076
Query 1080 GATTGAAGATATTAATGAAATGACTATAAGAAGCACACAGGTCGAACAATCTGAAATCGA 1139
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1077 GATTGGAGATATTAATGAAATGACTATAAGAAGCACACAGGTTGAACAATCTGAAATCGA 1136
Query 1140 AGGAAAACTGAACCAATTGACAG-TAGAGGTTGAGAAGGCTGAATCATTGGTTTCCAGTT 1198
|| ||||||||| ||||||| | |||||||||||||||||||||||||| |||| ||||
Sbjct 1137 AGAAAAACTGAAGCAATTGAT-GCTAGAGGTTGAGAAGGCTGAATCATTGCTTTCTAGTT 1195
Query 1199 TGAAAGAGGAGGAGAACATGGTAATGGAAAAAGCATCAGCCGGAGGGAAGGAGAAGGAAC 1258
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 1196 TGAAAGAGGAGGAGAACATGATAATAGAAAAAGCATCAGCCGGAGGGAAGGAGAAGGAAC 1255
Query 1259 ACATAGAGGAGATGATTAGAGACCATGAAAAGAAACAAAGAAACATGAACGCGCACATCA 1318
|||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1256 ACATAGAGCATATGATTAGAGACCATGAAAAGAAGCAAAGAAACATAAACGCGCACATCA 1315
Query 1319 ATGATCTGAAGAAACATCAAACAAATAAGGTTACCGCATTTGGAGGGGACAAAGTCATTA 1378
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1316 ATGATCTGAAGAAACATCAAACAAATAAGGTTACCGCATTTGGAGGGGACAGAGTCATTA 1375
Query 1379 ATCTTTTACGAGCGATTGAGAGACATCACCGCAGATTTAAAATGCCACC-A--------A 1429
||||||| ||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1376 ATCTTTTGCGAGCGATTGAGAGACATCACCGCAGATTTAAAATGCCACCGATTGGTCCGA 1435
Query 1430 TTGGTCCGATTGGTGCTCATGTGACATTGATCAATGGTAATAGATGGGCTTCTGCAGTTG 1489
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1436 TTGGTCCGATTGGTGCTCATGTGACATTGGTCAATGGTAATAGATGGGCTTCTGCAGTTG 1495
Query 1490 AACAAGCTCTTGGCAACCTCCTGAATGCCTTTATAGTGACCGATCATAAAGATTTAGTTG 1549
|||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||
Sbjct 1496 AACAAGCTCTTGGCAACCTCCTGAATGCCTTTATTGTGAACGATCACAAAGATTTAGTTA 1555
Query 1550 CTTTGCGAGACTGTGGAAAGGAAGCAAAATATAACAATCTAAAGATTATCATCTATGACT 1609
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1556 CTTTGCGAGACTGTGGAAAGGAAGCAAATTATAACAATCTAAAGATTATCATCTATGACT 1615
Query 1610 TTTCAAGACCAAGGTTAGA-TATACCAAGGCACATGATTCCTCAAACAGAACACCCAACT 1668
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 TTTCAAGACCAAGGTTA-ACTATACCAAGGCACATGATTCCTCAAACAGAACACCCAACT 1674
Query 1669 ATTCTCTCTGTCTTGCACTCTGAGAATACTACTGTTCTTAACGTCTTGGTGGATGTGAGT 1728
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1675 ATTCTCTCTGTCTTGCACTCAGAGAATACTACTGTTCTTAACGTCTTGGTGGATGTGAGT 1734
Query 1729 TGCGTAGAGAGGC-ATGTGCTTGCAGAAAATTATGAGGTTGGCAAGATTATTGCCTTTGA 1787
| |||||| ||| | ||||||||||| |||||||| |||||||||| |||||||||||
Sbjct 1735 GGTGTAGAGCGGCGA-GTGCTTGCAGAGAATTATGAAGTTGGCAAGACCATTGCCTTTGA 1793
Query 1788 GAGAAGGCTCTCACATCTGAAGGATGTTTTCACTATAGATGGATACCGAATGTTTTCCCG 1847
||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1794 GAGAAGGCTTTCGCATCTGAATGATGTTTTCACTATAGATGGATACCGAATGTTTTCCCG 1853
Query 1848 TGGGCCTGTTCAGACAACCCTTCCTCCCCGT-CCTCGAAGACCTACTAGATTGTGTGCTT 1906
||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||
Sbjct 1854 TGGGCCTGTTCAGACAACCCTTCCTCCCCGTTCC-CGGAGACCTACTCGATTGTGTGCTT 1912
Query 1907 CTTTTGATGACCAAATCAAGGATCTTGAAATAGAGGCCTCAAGAGAACAAAGTGAGATAC 1966
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1913 CTTTTGATGACCAAATCAAGGATCTTGAAATAGAGGCCTCAAAAGAACAAAGTGAGATAC 1972
Query 1967 AGGAATGTAGGGGACAAAAGAGGGAGGCAGAAATGAATCTCGAGGGTCTTGAATCAACAA 2026
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1973 AGGAATGCAGGGGACAAAAGAGGGAGGCAGAAATGAATCTCGAGGGTCTTGAATCAACAA 2032
Query 2027 TGCGCAGACTGAAGAAGCAACGCACCCAACTAGAGAAAGATTTGACAAGGAAGGAACTTG 2086
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 2033 TGCGTAGACTGAAGAAGCAACACACCCAACTAGAGAAAGATTTGACAAGGAAGGAAATTG 2092
Query 2087 AAATGCAGGATCTGAAAAATTCAGTCGCTTCTGAAACCAAAGCATCACCTACATCAAGTG 2146
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 2093 AAATGCAGGATCTGAAAAATTCAGTCGCTTCTGAAACCAAAGTATCACCTACTTCAAGTG 2152
Query 2147 TTAATGAGCTTCATCTAGAAATCATGAAATTCCAAAAAGAGATAGAGGAGAAAGAATCCT 2206
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 2153 TTAATGAGCTTCATCTAGATATCATGAAATTCCAAGAAGAGATAGAGGAGAAAGAATCCT 2212
Query 2207 TGCTAGAAAAACTTCAAGACTCCTTGAAGGAAGCCGAACTAAAGGCTAATGAACTTAAAG 2266
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 2213 TGCTAGAAAAACTTCAAGACTCCTTGAAGGAAGCTGAAATAAAGGCTAATGAACTTAAAG 2272
Query 2267 CTTCATATGAAAACTTATATGAGTCCGCCAAGGGTGAAATTGAAGCCCTTGAGAAAGCTG 2326
||||||||||||| ||||||| | | | ||||||||||||||||||||||||
Sbjct 2273 CTTCATATGAAAAATTATATG-G---G----G----AAATTGAAGCCCTTGAGAAAGCTG 2320
Query 2327 AGGATGAGCTAAAGGAGAAAGAAGATGAACTCCATTCTGCAGAAACGGAGAAGAACCATT 2386
||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct 2321 AGGATGAGCTAAAGGAGAAAGAAGAAGAACTCCAATCCGCAGAAACGGAGAAGAACCATT 2380
Query 2387 ATGAGGATATAATGAAGGACAAGGTCTTACCCGAGATTAAACAGGCTGAGACTATATATA 2446
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 2381 ATGAGGATATAATGAAGGACAAGGTCTTACCCGAGATTAAACAGGCTGAGGCTAAATATG 2440
Query 2447 AGGAGCTTGAAATGAAACGGCAGGAAAGCAACAAGAAGGCCTCCATAATTTGTCCTGAGA 2506
|||| ||| ||| ||| ||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 2441 AGGAACTTAAAACGAAGCGGCAGGAAAGTAACGAGAAGGCCTCCATAATTTGTCCTGAGA 2500
Query 2507 GTGA-GATAAAAGCTTTGGGTCCTTGGGATGGG-CCAACTCCTTTGCAGCTTAGTGCTCA 2564
|| | ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 2501 GT-ACGATAAGAGCTTTGGGTCCTTGGGATGGGGCCA-CTCCTTTGCAGCTTAGTGCTCA 2558
Query 2565 GATTAACAAAATAAATCATAGGCTGAAGCGAGAGAATGAGAA-T--T-A--TT-CTG--- 2614
||||||||||||||||||||| |||||||||||||||||||| | | | || |||
Sbjct 2559 GATTAACAAAATAAATCATAGACTGAAGCGAGAGAATGAGAAGTGCTTAAGTTTCTGTGC 2618
Query 2615 -----A-----A-TCAATCGATGACCTCAGGATTATGCACGGGGAAAAAGAACAGAAGAT 2663
| | |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2619 CTTGTATTCTGAATCAATCGATGACCTCAGGATTATGCACGAGGAAAAAGAACAGAAGAT 2678
Query 2664 TGGGAAGAAACGCAAAACTTACAAAAGCTGTCGAGAAAAACTCAAGGTCTGCAAAGATGC 2723
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2679 TGGGAAGAAACGCAAAACTTACAAAAGCTTTCGAGAAAAACTCAAGGTCTGCAAAGATGC 2738
Query 2724 AGTAGACTCACGGTGGAACAAGCTCCAAAGAAATAAAGATCTTCTGAAGCGAGAATTAAC 2783
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2739 AGTAGACTCACGGTGGAACAAGCTCCAAAGAAATAAAGATCTTCTGAAGCCCCAATTAAC 2798
Query 2784 TTGGCAATTCAAC-CATCATTTAGGAAAGAAAGGTATCAGTGGAAATATCAGAGTCTCTT 2842
||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2799 TTGGCAATTTAACTC-TCATTTAGGAAAGAAAGGTATCAGTGGAAATATCAGAGTCTCTT 2857
Query 2843 ATGAAGACAAAACTTTGTCCATAGAGGTAAAGATGCCTCAAGATGCAACAAACAGTGCTG 2902
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2858 ATGAAGACAAAACTTTGTCCATAGAGGTTAAGATGCCTCAAGATGCAACAAACAGTGCTG 2917
Query 2903 TTCGAGATACTAGAGGACTTTCAGGTGGGGAACGGTCTTTCTCGACTTTATGCTTCACAT 2962
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||
Sbjct 2918 TTCGAGATACTAGAGGGCTTTCAGGTGGGGAACGATCTTTCTCGACTTTATGTTTCGCAT 2977
Query 2963 TAGCTCTTCAGAATATGACTGAAGCCCCAATTCGAGCAATGGACGAGTTTGATGTGTTTA 3022
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2978 TGGCTCTTCACAATATGACTGAAGCCCCAATTCGAGCAATGGACGAGTTTGATGTGTTTA 3037
Query 3023 TGGACGCAGTTAGCAGGAAAATCAGCTTAGACACATTGATTGATTTCGCATTGAAACAAG 3082
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 3038 TGGACGCAGTTAGCAGGAAAATCAGCTTAGACACATTGGTTGATTTCGCATTGGAACAAG 3097
Query 3083 GTTCACAGTGGATGTTCATCACTCCTCATGATATAAGTATGGTGAAGTCACACGAGAAGA 3142
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3098 GTTCACAGTGGATGTTCATCACTCCTCATGATATAAGTATGGTAAAGTCACACGAGAAGA 3157
Query 3143 TAAAGAAGCAACAAATGGCTGCTCCACGTTCTTGA 3177
||||||||||||||||||||||||| |||||||||
Sbjct 3158 TAAAGAAGCAACAAATGGCTGCTCCTCGTTCTTGA 3192
> Ahg496305 jgi|Araly1|496305|fgenesh2_kg.8__2121__AT5G61460.1
Length=3498
Score = 2713 bits (1469), Expect = 0.0
Identities = 2603/3145 (83%), Gaps = 100/3145 (3%)
Strand=Plus/Plus
Query 83 TTGAGAATTTCATGTGCCACAGTAATCTCGAGATTGAGTTTGGCGATTGGGTCAATTTCA 142
||||||||||||||||||| ||||||||| ||||||| |||||||| ||||| |||||||
Sbjct 174 TTGAGAATTTCATGTGCCATAGTAATCTCCAGATTGAATTTGGCGAGTGGGTTAATTTCA 233
Query 143 TCACTGGTCAAAACGGAAGTGGTAAGAGTGCGATATTGACTGCTCTATGTGTTGCCTTTG 202
|||| || ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||
Sbjct 234 TCACCGGCCAAAACGGAAGTGGTAAGAGTGCAATACTGACTGCTCTATGTGTTGCATTTG 293
Query 203 GATGTCGAGCCAGGGGAACTCAGCGCGCCGCTACGT-TGAAA-GATTTCATTAAAACTGG 260
||||||||||||| || ||||||||||| || || | | ||| |||||||||||||||||
Sbjct 294 GATGTCGAGCCAGAGGCACTCAGCGCGCTGCCAC-TCT-AAAGGATTTCATTAAAACTGG 351
Query 261 ATGCAGCTATGCCCTTGTTTATGTCGAACTGAAAAACCAA-GGAGAGGATGCTTTCAAGC 319
||||||||||||| |||| |||| ||| ||||||| ||| |||||||||||||| ||||
Sbjct 352 ATGCAGCTATGCCGTTGTCCATGTAGAAATGAAAAA-CAATGGAGAGGATGCTTTTAAGC 410
Query 320 CTGAAATATATGGTGATA-CTCTGATTATTGAACGCAGGATCTCTGATTCCACTA-GTTT 377
||||||| |||||||| | | | ||||| ||||||||||| ||||||| |||| | |
Sbjct 411 CTGAAATTTATGGTGA-AGTTATAATTATCGAACGCAGGATAACTGATTCTACTACATCT 469
Query 378 AACGGTTCTCAAGGATCATCAAGGAAGAAAAA-TATCTAGCCGAAA-GGAGGAGCTACGG 435
|| |||||||| ||| ||| ||||| ||||| || || | ||| |||||||||||||
Sbjct 470 -ACCGTTCTCAAAGATTATCTAGGAA-AAAAAGTAAGTA-ACAAAAGGGAGGAGCTACGG 526
Query 436 GAACTAGTTGAACATTATAATATTGATGTTGAGAATCCC-TGTGTGATAATGAGTCAAGA 494
||||| |||||||||| ||||||||||||||| || ||| |||||| |||||||||||||
Sbjct 527 GAACTTGTTGAACATTTTAATATTGATGTTGA-AAACCCGTGTGTGGTAATGAGTCAAGA 585
Query 495 CAAGAGCAGGGAGTTCTTACATTCTGGTAACGACAAAGATAAATTCAAGTTCTTTTATAA 554
||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||
Sbjct 586 CAAAAGCAGGGAGTTCTTACATTCTGGAAATGACAAAGATAAATTCAAGTTCTTTTTTAA 645
Query 555 AGCAACCCTTCTTCAGCAAGTCGATGATATTCTTCAAAGTATTGGTAC-AA-AGTTGAAT 612
||||||||||||||||||||| ||||| |||| ||||||| | ||| || | |||||
Sbjct 646 GGCAACCCTTCTTCAGCAAGTCAATGATCTTCTCCAAAGTA-T-CTACGAACACTTGAAA 703
Query 613 TCTGCAAATGCTCTTTTGGATGAGA-TGGAGAAGACCATAAAACCAATAGAAAAGGAGAT 671
||||| |||| | | ||||| | ||||||| || || ||||||||||||||||||||
Sbjct 704 AATGCAACTGCTATAGTCGATGA-ATTGGAGAACACAATTAAACCAATAGAAAAGGAGAT 762
Query 672 CAATGAGTTGCTTGAAAAGATAAAGAATATGGAACATGTTGAAGAAATAACTCAACAGGT 731
|| |||||||| || ||||||||||||||||||||| |||||||||||| ||||| | ||
Sbjct 763 CAGTGAGTTGCGTGGAAAGATAAAGAATATGGAACAAGTTGAAGAAATAGCTCAA-AAGT 821
Query 732 T-CTGCATTTGAAAAAGAAACTAGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCA 790
| | ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 822 TGCAGCAGTTGAAGAAGAAACTGGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCC 881
Query 791 AGGAGCAGAATGAGAAGATCGTGAAA-TTCAAAGAACG-AGTGCCAACTTGTCAAAATAA 848
|||| |||| ||||||||| ||||| || |||||||| | | || ||||| ||| |||
Sbjct 882 AGGAACAGACTGAGAAGATTGTGAAGCTT-AAAGAACGTA-TACCGACTTGCCAAGCTAA 939
Query 849 AATTGATCGGAAACTGGGTGAGGTGGAATCTTTAAGGG-TA-AGCTTAACCGAGAAGAAA 906
||| ||| || |||||||| | || ||||| ||||||| || | || ||| ||||||||
Sbjct 940 AATAGATTGGGAACTGGGTAAAGTAGAATCGTTAAGGGATACA--TTGACCAAGAAGAAA 997
Query 907 GCTCAAGTTGCCTG-CTTGATAGATGAGTCAACTGCGATGAAGAGAGAGCTAGAGTGTTT 965
||||||||||| || || ||| ||||| |||||||| |||||||||||| ||||| ||||
Sbjct 998 GCTCAAGTTGCATGTCT-GATGGATGAATCAACTGCAATGAAGAGAGAGATAGAGAGTTT 1056
Query 966 GCGGCAATCAATGAAGAAGGCTGCAAGAGAGAAGATTGCTTTAGAAGAAGAATACCATCA 1025
| |||||| ||||| ||||| | |||| ||||||||| || ||||||||| | ||||
Sbjct 1057 TCACCAATCAGCGAAGACGGCTGTACGAGAAAAGATTGCTCTACAAGAAGAATTCAATCA 1116
Query 1026 TAAGTGCAGTAACATTCAGAAGATTAAGGATCGTGTTAGGAGGCTTGAACGACAGATTGA 1085
|||||||| | | |||| |||||||||||||||||||| ||||||||||| ||| |||
Sbjct 1117 TAAGTGCAATTATGTTCAAAAGATTAAGGATCGTGTTAGAAGGCTTGAACGGCAGGTTGG 1176
Query 1086 AGATATTAATGAA-ATGACTAT-AAGAAGCACACAGG-TCGAACAATCTGAAATCGAAGG 1142
|||||| |||||| | ||| || || || |||||||| | ||||||||||||||||| ||
Sbjct 1177 AGATATCAATGAACA-GACAATGAAAAA-CACACAGGCT-GAACAATCTGAAATCGA-GG 1232
Query 1143 A-AAACTGAACCAATTGACAGTAG-AGGTTGAGAAGGCTGAATCATTGGTTTCCAGTTTG 1200
| ||||| || | ||| || || |||||||||| | |||| | ||| ||| ||| |||
Sbjct 1233 AGAAACTAAAATATTTGG-AGCAGGAGGTTGAGAAAGTTGAAACCTTGCTTTTCAGATTG 1291
Query 1201 AAAGAGGAGGAGAACATGGTAA-TGGAAAAAGCATCAGCCGG-AGGGAAGGAGA-AGGAA 1257
|||||||| |||||| || | | |||||||||| | | || ||| ||| ||| || ||
Sbjct 1292 AAAGAGGAAGAGAAC-TGCTTACTGGAAAAAGCGTTTGATGGGAGGAAAG-AGATAG-AA 1348
Query 1258 CACATAGAGGAGATGATTAGAGACCATGAAAAGAAACAAAGAAACATGAACG-CGCACAT 1316
||||| ||||| ||||||| | ||||| |||||| |||||| | | |||| || ||||
Sbjct 1349 CACATCGAGGATATGATTAAAAACCATCAAAAGAGGCAAAGATTCGT-AACGTCGAACAT 1407
Query 1317 CAATGATCTGAAGAAACATCAAACAAATAAGGTTACCGCATTTGGAGGGGACAAAGTCAT 1376
|||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct 1408 TAATGATCTGAAGAAACATCAAACAAACAAGGTTACTGCATTTGGAGGGGACAGAGTCAT 1467
Query 1377 TAATCTTTTACGAG-CGATTGAGAGACATCACCGCAGATTTA-AAATGCCACCAATTGGT 1434
||||||| | | || | ||||||||| |||| || ||||| | ||| ||||||||||||
Sbjct 1468 TAATCTTCTGC-AGGCTATTGAGAGAAATCATCGTAGATTCAGAAAA-CCACCAATTGGT 1525
Query 1435 CCGATTGG-TGCTCATGTGACATT-GATCAATGGTAATAGATGGGCTTCTGCAGTTGAAC 1492
|| ||||| | | |||||||| || | ||||||| |||| |||||||||| |||||||||
Sbjct 1526 CCTATTGGCTCC-CATGTGACTTTAG-TCAATGGCAATAAATGGGCTTCTACAGTTGAAC 1583
Query 1493 AAGCTCTTGGCAACCTCCTGAATGCCTTTATAGTGACCGATCATAAAGATTTAGTTG-CT 1551
|||||||||| ||||| | |||||||| || ||||| ||||||||||||| | | ||
Sbjct 1584 AAGCTCTTGGAAACCTATTAAATGCCTTCATTGTGACTGATCATAAAGATTC-GCTCACT 1642
Query 1552 TTGCGAGACTGTGGAAAGGAAGCAAAATATA-ACAATCTAAAGATTATCATCTATGACTT 1610
| ||| ||||| ||| ||||| || |||| | || || ||||||||||||||||||||
Sbjct 1643 CTAAGAGGCTGTGCAAATGAAGCCAATTATAGA-AACCTCAAGATTATCATCTATGACTT 1701
Query 1611 TTCAAGACCAAGGTTAGA-TATACCAAGGCACATGATTCCTCAAACAGAACACCCAACTA 1669
||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct 1702 TTCGAGACCAAGGTT-GAATATACCAAGGCACATGATTCCTCAGACAGAACACCCAACTA 1760
Query 1670 TTCTCTCTGTCTTGCACTCTGAGAATACTACTGTTCTTAACGTCTTGGTGGATGTGAGTT 1729
|| |||||||| | |||||||| || | || || ||||| ||||||||||||||||||
Sbjct 1761 TTTTCTCTGTCATACACTCTGATAACCCAACCGTCCTTAATGTCTTGGTGGATGTGAGTG 1820
Query 1730 GCGTAGAGAGGCATGTGCTTGCAGAAAATTATGAGGTTGGCAAGATTATTGCCTTTGAGA 1789
| || |||||||| ||||||||||| || |||||||| || ||| |||| |||| ||
Sbjct 1821 GTGTTGAGAGGCAAGTGCTTGCAGAGAACTATGAGGTGGGAAAGGCGGTTGCATTTGGGA 1880
Query 1790 GAAGGCTCTCACATCTGAAGGATGTTTTCACTATAGATGGATACCGAATGTTTTCCCGTG 1849
|||||||||| ||||||||||||||| |||| |||| |||||||||||||||| ||||
Sbjct 1881 AAAGGCTCTCAAATCTGAAGGATGTTTACACTTTAGACGGATACCGAATGTTTTTTCGTG 1940
Query 1850 GGCCTGTTCAGACAACCCTTCCTCCCCGTCCTCGAAGACCTACTAGATTGTGTGCTTCTT 1909
|||| |||||||| || |||||||| | |||||| ||| || | || | ||||||||||
Sbjct 1941 GGCCAGTTCAGACTACTCTTCCTCCTCTTCCTCGTAGATCTTCGCGACTCTGTGCTTCTT 2000
Query 1910 TTGATGACCAAATCAAGGATCTTGAAATAGAGGCCTCAAGAGAACAAAGTGAGATACAGG 1969
|||||||||| |||||||||||||||||||| ||||||| |||||||| |||||| |
Sbjct 2001 TTGATGACCAGATCAAGGATCTTGAAATAGAAGCCTCAAAAGAACAAAACGAGATAAATC 2060
Query 1970 AATGTAGGGGACAAAAGAGGGAGGCAGAA-ATGAATCTCGAGGGTCTTGAATCAACAA-T 2027
|||| | ||| ||||| |||||||| | ||||||||||| ||||| || | || |
Sbjct 2061 AATGCATTAGACGTAAGAGAGAGGCAGAGGA-GAATCTCGAGGAACTTGAGTCGA-AAGT 2118
Query 2028 GCGCAGACTGAAGAAGCAACGCACCCAA-CTAGAGAAAGATTTGACAAGGAAGGAACTTG 2086
||||| |||||||||||| |||| |||| | |||||| | |||||| | ||||||||||
Sbjct 2119 GCGCACACTGAAGAAGCACCGCAGCCAAGC-AGAGAAGGTTTTGACGACAAAGGAACTTG 2177
Query 2087 AAATGCAGGATCTGAAAAATTCAGTCGCTTCTGAAACCAAAGCATCACCTACATCAAGTG 2146
| ||||||||| |||| ||| |||||||| |||| ||| ||||||||||| | |||||||
Sbjct 2178 AGATGCAGGATTTGAAGAATACAGTCGCTGCTGAGACCGAAGCATCACCTTCTTCAAGTG 2237
Query 2147 TTAATGAGCTTCATCTAGAAATCATGAAATTCCAAAAAGAGATAGAGGAGAAAGAATCCT 2206
||||||||||||| || |||||||||||| || | |||||||||| ||||||||| | |
Sbjct 2238 TTAATGAGCTTCAACTTGAAATCATGAAAGACCGAGAAGAGATAGATGAGAAAGAAGCTT 2297
Query 2207 TGCTAGAAAAACTTCAAGACTCCTTGAAGGAAGCCGAACTAAAGGCTAATGAACTTAAAG 2266
|||| || || || ||| ||| |||||| ||||| || || |||||| || |||||| ||
Sbjct 2298 TGCTTGAGAAGCTCCAAAACTGCTTGAAAGAAGCTGAGCTTAAGGCTCATAAACTTACAG 2357
Query 2267 CTTCATATGAAAACTTATATGAGTCCGCCAAGGGTGAAATTGAAGCCCTTGAGAAAGCTG 2326
|||||| ||| ||||| |||||| ||||||||||||||||| ||| ||||| |||| |
Sbjct 2358 CTTCATTTGAGAACTTGCGTGAGTCAGCCAAGGGTGAAATTGATGCCTTTGAGGAAGCAG 2417
Query 2327 AGGATGAGCTAAAGGAGAA--AGAAGATGAACTCCATTCTGCAGAAACGGAGAAGAA-CC 2383
|| ||||||||||| ||| |||| | || || || ||||| ||| ||||||| || ||
Sbjct 2418 AGAATGAGCTAAAGAAGATTGAGAA-A-GACCTTCAGTCTGCCGAAGCGGAGAA-AATCC 2474
Query 2384 ATTATGAGGATATAATGAAGGACAAGGTCTTACCCGAGATTAA-ACAGGCTGAGACTATA 2442
|||| ||| | |||||||| |||||||| |||| || ||||| | | |||||| ||| |
Sbjct 2475 ATTACGAGAACATAATGAAAAACAAGGTCCTACCTGATATTAAGA-ATGCTGAGGCTA-A 2532
Query 2443 -TATAAGGAGCTTGAAA-TGAAACGGCAGGAAAGCAACAAGAAGGCCTCC-ATAATTTGT 2499
|| |||||||| ||| | || ||| ||||||| || |||||||||| | |||||||
Sbjct 2533 CTACGAGGAGCTTAAAAAT-AAGCGGAAGGAAAGTGACCAGAAGGCCTCTGA-AATTTGT 2590
Query 2500 CCTGAGAGTGAGATAAAAGCTTTGGGTCCTTGGGATGGGCCAACTCCTTTGCAGCTTAGT 2559
||||||||||||||| || |||||||||| ||||||||| |||||| ||| || |||
Sbjct 2591 CCTGAGAGTGAGATAGAATCTTTGGGTCCCTGGGATGGGAGTACTCCTGAGCAACTCAGT 2650
Query 2560 GCTCAGATTAACAAAATAAATCATAGGCTGAAGCGAGAGAATGAGAA-TTATTCTGAATC 2618
|||||||||| || ||| ||||| || || | ||||||||| || | || |||||||||
Sbjct 2651 GCTCAGATTACCAGAATGAATCAGAGACTTCATCGAGAGAATCAGCAGTT-TTCTGAATC 2709
Query 2619 AATCGATGACCTCAGGATTATGCACGGG-GAAAAAGAACAGAA-GATTGGGAAGAAACGC 2676
||| |||||||| ||||| ||| | | | | | |||| ||| ||||| ||||| |||
Sbjct 2710 AATTGATGACCTTAGGATGATGTATGAGAGCCTA-GAAC-GAAAGATTGCAAAGAAGCGC 2767
Query 2677 AAAACTTA-CAAAAGCTGTCGAGAAAAACTCAAGGTCTGCAAAGATGCAGTAGACTCACG 2735
||| | || ||| | | |||||||||||||| || ||||||| |||| |||| |||||
Sbjct 2768 AAATCCTATCAAGACCA-TCGAGAAAAACTCATGGCCTGCAAAAATGCTTTAGATTCACG 2826
Query 2736 GTGGAACAAGCTCCAAAGAAATAAAGATCTTCTGAAGCGAGAATTAACTTGGCAATTCAA 2795
||| |||| | ||||||||| | |||||| ||| | ||||| |||||||||||
Sbjct 2827 TTGGGGCAAGTTTCAAAGAAATGCATCTCTTCTTCGGCGCCAGTTAACATGGCAATTCAA 2886
Query 2796 C-CATCATTTAGGAAAGAAAGGTATCAGTGGAAATATCAGAGTCTCTTATGAAGACAAAA 2854
| | ||| || ||||||||||||||||| ||| | |||| |||| ||||||||| ||||
Sbjct 2887 CTC-TCACTTGGGAAAGAAAGGTATCAGCGGACACATCAAAGTCAGTTATGAAGATAAAA 2945
Query 2855 CTTTGTCCATAGAGGTAAAGATGCCTCAAGATGCAACAAACAGTGCTGTTCGAGATACTA 2914
|||||||||||||||| |||||||||||||| ||||||| || ||| |||||||| || |
Sbjct 2946 CTTTGTCCATAGAGGTTAAGATGCCTCAAGACGCAACAAGCAATGCCGTTCGAGACACCA 3005
Query 2915 GAGGACTTTCAGGTGGGGAACGGTCTTTCTCGACTTTATGCTTCACATTAGCTCTTCA-G 2973
||| |||||||| || ||||| ||||||||||||||||| || ||||||||||||| |
Sbjct 3006 AAGGTCTTTCAGGCGGAGAACGTTCTTTCTCGACTTTATGTTTTGCATTAGCTCTTCACG 3065
Query 2974 AATATGACTGAAGCCCCAATTCGAGCAATGGACGAGTTTGATGTGTTTATGGACGCAGTT 3033
|| ||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||
Sbjct 3066 AA-ATGACGGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTC 3124
Query 3034 AGCAGGAAAATCAGCTTAGACACATTGATTGATTTCGCA-TTGAAACAAGGTTCACAGTG 3092
||| ||||||||||||| ||| || || | ||||| ||| ||| | ||||| || |||||
Sbjct 3125 AGCCGGAAAATCAGCTTGGACGCACTGGTGGATTTTGCAATTGGA-CAAGGATCGCAGTG 3183
Query 3093 GATGTTCATCACTCCTCATGATATAAGTATGGTGAAGTCACACGAGAAGATAAAGAAGCA 3152
||||||||| || ||||||||||| || ||||| ||||| ||||||| ||||||||||||
Sbjct 3184 GATGTTCATTACCCCTCATGATATCAGCATGGTCAAGTCGCACGAGAGGATAAAGAAGCA 3243
Query 3153 ACAAATGGCTGCTCCACGTTCTTGA 3177
|||||||||||||| |||||||||
Sbjct 3244 GCAAATGGCTGCTCCTCGTTCTTGA 3268
> Ahg914130 jgi|Araly1|914130|Al_scaffold_0001_4384
Length=474
Score = 732 bits (396), Expect = 0.0
Identities = 439/460 (95%), Gaps = 2/460 (0%)
Strand=Plus/Plus
Query 307 GATGCTTTCAAGCCTGAAATATATGGTGATACTCTGATTATTGAACGCAGGATCTCTGAT 366
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1 GATGCTTTTAAGCCTGAAATATATGGTGATACTCTGATTATTGAACGCAGGATATCTGAT 60
Query 367 TCCACTAGTTTAACGGTTCTCAAGGATCATCAAGGAAGAAAAATATCTAGCCGAAAG-GA 425
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 61 TCTACTAGTTTAACGGTTCTCAAGGATCATCAAGGAAGAAAAATATCAAGCCG-AAGAGA 119
Query 426 GGAGCTACGGGAACTAGTTGAACATTATAATATTGATGTTGAGAATCCCTGTGTGATAAT 485
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GGAGCTACGGCAACTTGTTGAACATTATAATATTGATGTTGAGAATCCCTGTGTGATAAT 179
Query 486 GAGTCAAGACAAGAGCAGGGAGTTCTTACATTCTGGTAACGACAAAGATAAATTCAAGTT 545
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 180 GAGTCAAGACAAGAGCAGGGAGTTCTTACATTCTGGAAACGACAAAGACAAATTCAAGTT 239
Query 546 CTTTTATAAAGCAACCCTTCTTCAGCAAGTCGATGATATTCTTCAAAGTATTGGTACAAA 605
||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||
Sbjct 240 CTTTTATAAAGCAACCCTTCTTCAGCAAGTCGATGATCTTCTTCAAAGTATTGGCATTAA 299
Query 606 GTTGAATTCTGCAAATGCTCTTTTGGATGAGATGGAGAAGACCATAAAACCAATAGAAAA 665
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 300 GTTGAAATCTGCAAATGCTCTTATGGATGAGATGGAGAAGACCATAAAACCAATAGAAAA 359
Query 666 GGAGATCAATGAGTTGCTTGAAAAGATAAAGAATATGGAACATGTTGAAGAAATAACTCA 725
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GGAGATCAGTGAATTGCTTGAAAAGATAAAGAATATGGAACATGTTGAAGAAATAACTCA 419
Query 726 ACAGGTTCTGCATTTGAAAAAGAAACTAGCTTGGTCATGG 765
||||||||||||| ||||||| || |||||||||||||||
Sbjct 420 ACAGGTTCTGCATCTGAAAAATAAGCTAGCTTGGTCATGG 459
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120022361995
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5