BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT5G07870.1

Length=1532
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg487617 jgi|Araly1|487617|fgenesh2_kg.6__751__AT5G07870.1         1978    0.0   
  Ahg487616 jgi|Araly1|487616|fgenesh2_kg.6__750__AT5G07850.1          494    1e-138
  Ahg948948 jgi|Araly1|948948|scaffold_800835.1                        279    3e-74 


> Ahg487617 jgi|Araly1|487617|fgenesh2_kg.6__751__AT5G07870.1
Length=1472

 Score = 1978 bits (1071),  Expect = 0.0
 Identities = 1364/1500 (91%), Gaps = 42/1500 (3%)
 Strand=Plus/Plus

Query  7     CAAAGAAACATTGAAAGACACAAAAG-AGTCATATTATACACAttttttttCTTCTTGGa  65
             |||||||||||||||||| ||||||| || |||||||||||| |||||||| ||||| | 
Sbjct  1     CAAAGAAACATTGAAAGAAACAAAAGAAG-CATATTATACACTTTTTTTTTTTTCTT-G-  57

Query  66    aaaaaaTGGATTCTTCTTCATCTGAAGTAAGGATAATCTCAAAATGCTTCGTCAAACCCA  125
             |||| ||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||||
Sbjct  58    AAAACATGGATTCTTCTTCATCAGAAGTAAAGATTATCTCTAAATGCTTCGTCAAACCCA  117

Query  126   AAAC-CATCCCTCAAAAATGGAAAGAACCTTACCATTTTTCACCAACGGATCATATAATG  184
             |||| | ||||| ||||||||||||| ||||||||||||||||||  ||||||| | |||
Sbjct  118   AAACTC-TCCCTGAAAAATGGAAAGAGCCTTACCATTTTTCACCATTGGATCATGTGATG  176

Query  185   CTCTCAATCCATTACATCCAAAAGGGTCTTCTTTTTCTCAAACCATCA--TT-T---TCT  238
             ||||||||||||||||||||||| ||||||||||||||||||||||||  || |   |||
Sbjct  177   CTCTCAATCCATTACATCCAAAAAGGTCTTCTTTTTCTCAAACCATCATTTTGTGAATCT  236

Query  239   G--AATCT-GTCAAACCAAAAGAGTTCATGGAGACTTTGCTGCAGAAGCTTAAAGACTCA  295
             |  ||| | ||||| |||||||||||||| |||||||||||| |||||||||||||||| 
Sbjct  237   GACAATGTAGTCAACCCAAAAGAGTTCATTGAGACTTTGCTGGAGAAGCTTAAAGACTCT  296

Query  296   CTAGCCATAGCACTTGTCCATTTCTATCCTCTTGCAGGTCGTCTCTCTACTTTGAAAACC  355
             |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||
Sbjct  297   CTAGCCATAGCACTTGTCCATTTCTACCCGCTTGCAGGTCGTCTCTCTACTTTGAAATCC  356

Query  356   GACAATTCAAGATCTCACTCTGTGTTTGTGGATTGTAATAATAGTCCTGGTGCTAGATTT  415
              || | |||||||||||||| ||||| |||||||||||||| |||||||||||| |||||
Sbjct  357   AACGACTCAAGATCTCACTCAGTGTTGGTGGATTGTAATAACAGTCCTGGTGCTGGATTT  416

Query  416   ATCCATGCTGAATCAGATCTAAGTGTGTCAGACATTCTTGGATCCACATATGTTCCTTTG  475
             ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct  417   ATCCATGCTGAGTCAGATCTAAGTGTGTCAGACATTCTTGGGTCCAAATATGTTCCTTTG  476

Query  476   GTTGTTCAATCTCTCTTTGATCATCACAAAGCATTGAATCGTGATGGTTACACCATGAGT  535
             |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct  477   GTTGTTCAATCTTTCTTTGATCATCACAAAGTATTGAATCGTGATGGTGACACCATGAGT  536

Query  536   CTCTTATCAATCAAGGTAACAGAACTGGTAGATGGAGTGTTCATAGGATTGTCTATGAAT  595
             ||| ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct  537   CTCCTATCAGTCAAGGTAACAGAATTGGTTGATGGAGTGTTCATAGGATTGTCTATGAAT  596

Query  596   CATTCCCTTGGAGATGGAAGTTCCTTCTGGCAGTTCTTCAACTCTTTGTCTGAGATCTTC  655
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  597   CATTCTCTTGGAGATGGAAGTTCCTTCTGGCAGTTCTTCAACTCTTTGTCTGAAATCTTC  656

Query  656   AATTCACAAGAAGAAACCATTGGGAATaacaacaacaacaacaacaacGCATTGCTCTGT  715
             ||||||||||||||||||||| ||  |                  || ||||||||||||
Sbjct  657   AATTCACAAGAAGAAACCATT-GG--T------------------AATGCATTGCTCTGT  695

Query  716   CTCAAGAATCCTCCAATCATTCGTGAAGCGACCGGTCCTATGTACAGCCTTCCCTTTAGT  775
             |||||||||||||||||| ||||||||| | | |||||||| |||||||||||||| |||
Sbjct  696   CTCAAGAATCCTCCAATCTTTCGTGAAGTGTCTGGTCCTATTTACAGCCTTCCCTTCAGT  755

Query  776   GAACCTAATGAGTCCCTTAGTCAATCCGAACCTCCGGTTTTGAAGGAGAGGATGTTCCAT  835
             |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  756   GAACCTGATGAGTCCCTTAGTCAATCAGAACCTCCGGTTTTGAAGGAGAGGATGTTCCAT  815

Query  836   TTCTCATCAGAAACAGTGAGATCGCTGAAATCAAAGGCGAATCAAGAATGCGGAACAACA  895
             ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct  816   TTCTCATCAGAAACAGTGAGATCACTGAAGTCAAAGGCGAATCAAGAATGCGGAACAACA  875

Query  896   ATGATCTCTTCT-TTTCAG-GCTCTGACCGCATTGATATGGAGAAGCATTACAAGAGCAA  953
             | |||||||| |  |||||  || | |||||||| |||||||||||||||||||||||||
Sbjct  876   AAGATCTCTT-TGCTTCAGTCCT-TAACCGCATTTATATGGAGAAGCATTACAAGAGCAA  933

Query  954   GAAAACTACCAAATGATCAAGAAACTACTTGCAGGTTTGCTGCTGGAAACAGATCAAGAA  1013
             ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct  934   GAAAACTACCAAATGATCAAGAAACTACTTGCAGGCTTGCTGCTGGCAATAGATCAAGAA  993

Query  1014  TGAATCCACCATTGCCGACGAATCAATTTGGAGTTTACATCTCTCTTGTGAAAACGACTA  1073
             |||| ||||||||||| | |||||| ||||| |||||| |||||||||||||| | ||||
Sbjct  994   TGAACCCACCATTGCCAAAGAATCACTTTGGGGTTTACGTCTCTCTTGTGAAAGCAACTA  1053

Query  1074  CTAAAATCGGTAATCTACTGGAGAATGAGTTTGGATGGATTGCTTTGAAACTGCATCAAG  1133
             | | ||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||
Sbjct  1054  CGATAATTGGTAATCTACTGGAGAATGAGTTTGAATGGGCTGCTTTGAAACTGCATCAAG  1113

Query  1134  CTGTTACCGAACACACTGGCGAAAAGATCTCTTACGAAATAGATCAAATG-TTGAAGTCT  1192
             |||| ||||||||||| || |||||||||||||||||| |||||||| || |||||||||
Sbjct  1114  CTGTAACCGAACACACGGGTGAAAAGATCTCTTACGAAGTAGATCAA-TGGTTGAAGTCT  1172

Query  1193  CCTTTACCGTTGCAAGCATATCGACTTTCCAATTTGAACATAGTTCACATGGGAAGTTCT  1252
             |||||||| ||||||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct  1173  CCTTTACCTTTGCAAGTATATCGACTTTCCAATTTGAACATTGTTCATATGGGAAGCTCT  1232

Query  1253  CCAAGGTTTAACAAGTACGGAAGCGAGTTTGGGATGGGGAAAGCGGTGGCGGTTAGAAGC  1312
             || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  1233  CCGAGGTTTAACAAGTACGGATGCGAGTTTGGGATGGGGAAAGCGGTGGCGGTTAGAAGC  1292

Query  1313  GGTTATGGCGGTAAGTATGACGGGAAGGTATCAGCTTATCCAGGAAGACAAGGAGGAGCA  1372
             |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  1293  GGTTATGGAGGTAAGTATGACGGGAAGGTATCAGCTTATCCAGGAAGAGAAGGAGGAGCA  1352

Query  1373  AGTATAGATTTGGAAGTATGTCTACTTCCAGAGTTTATGGAAGCTTTGGAATCAGATCAA  1432
             || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  1353  AGCATAGATTTGGAAGTATGTCTACTTCCAGAGTCTATGGAAGCTTTGGAATCAGATCAA  1412

Query  1433  GAGTTCATGTCTCTTGTCTCTTCTTCCACCTGATCCTATTCATATTTTCCAGACACAAAA  1492
             |||||||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||||
Sbjct  1413  GAGTTCATATCTCTTGCCTCTTCTTCTACCTGATCCTATTCATAATTTCCAGACACAAAA  1472


> Ahg487616 jgi|Araly1|487616|fgenesh2_kg.6__750__AT5G07850.1
Length=1370

 Score =  494 bits (267),  Expect = 1e-138
 Identities = 497/606 (82%), Gaps = 24/606 (4%)
 Strand=Plus/Plus

Query  71   ATGGATTCTTCTTCATCTGAAGTAAGGATAATCTCAAAATGCTTCGTCAAACCCAAAACC  130
            ||||||||| ||||||| |||||||  ||  | ||  ||||||| || ||||||||||||
Sbjct  1    ATGGATTCTCCTTCATCGGAAGTAAAAATCGTTTCTCAATGCTTTGTTAAACCCAAAACC  60

Query  131  ATCCCTC-AAAAATGGAAAGAACCTTACCATTTTTCACCAACGGATCATATAATGCTCTC  189
            ||||| | ||||||||||||| || |||||||| |||||   ||||| | | ||||||||
Sbjct  61   ATCCC-CGAAAAATGGAAAGAGCCATACCATTTATCACCCTTGGATCTTGTGATGCTCTC  119

Query  190  AATCCATTA-CATCCAAAAGGGTCTTCTTTTTCTCAAACCATCATTTTCTGAAT-CTGTC  247
             || ||||| | ||||||| |||||||| |||||| ||  |||   |  || || |  ||
Sbjct  120  TATGCATTATC-TCCAAAATGGTCTTCTCTTTCTC-AA--ATC---TGATG-ATGCAATC  171

Query  248  AAACCAAAAGAGTTCATGGAGACTTTGCTGCAGAAGCTTAAAGACTC-ACTAGCCATAGC  306
            ||| ||||||| ||||||||||||||||| || ||||||| ||| || | | ||  || |
Sbjct  172  AAAACAAAAGATTTCATGGAGACTTTGCTACAAAAGCTTAGAGATTCTA-TGGCTGTAAC  230

Query  307  ACTTGTCCATTTCTATCCTCTTGCAGGTCGTCTCTCTACTTTGAAAACCGACAATTCAAG  366
             ||||||||||| ||||| || || ||||||||||| ||||| |||||||||||| | ||
Sbjct  231  CCTTGTCCATTTTTATCCGCTCGCGGGTCGTCTCTCCACTTTAAAAACCGACAATCCGAG  290

Query  367  AT-CTCACTCTGTGTTTGTGGATTGTAATAATAGTCCTGGTGCTAGATTTATCCATGCTG  425
            || || |||| |||||||||||||||||| | ||||| || ||| ||||||||| |||| 
Sbjct  291  ATCCT-ACTCGGTGTTTGTGGATTGTAATGACAGTCCCGGGGCTGGATTTATCCGTGCTA  349

Query  426  AATCAGATCTAAGTGTGTCAGACATTCTTGGA-TCCACATATGTTCCTTTGGTTGTTCAA  484
            |||| |||||||||||   ||| ||| || || |||| ||||||||||||||||||||||
Sbjct  350  AATCGGATCTAAGTGTAAGAGATATTGTT-GAGTCCAAATATGTTCCTTTGGTTGTTCAA  408

Query  485  TCTCTCTTTGATCATCACAAAGCATTGAATCGTGATGGTTACACCATGAGTCTCTTATCA  544
            ||| ||||||| || || |||||  |||  | ||||||| |||||||||||||||| |||
Sbjct  409  TCTTTCTTTGACCACCATAAAGCCGTGAGCCATGATGGTCACACCATGAGTCTCTTCTCA  468

Query  545  ATCAAGGTAACAGAACTGGTAGATGGAGTGTTCATAGGATTGTCTAT-GAATCATTCCCT  603
             |||||||||||||| |||||||||||||||||||||||||||| || ||||||  | ||
Sbjct  469  GTCAAGGTAACAGAATTGGTAGATGGAGTGTTCATAGGATTGTC-ATTGAATCA--CGCT  525

Query  604  -TGG-AGATGGAAGTTCCTTCTGGCAGTTCTTCAACTCTTTGTCTGAGATCTTCAATTCA  661
             ||| ||||||| || | || ||||| || |||||||||||||| ||||| |||||| ||
Sbjct  526  GTGGGAGATGGAGGTACATTATGGCATTTTTTCAACTCTTTGTCGGAGATTTTCAATGCA  585

Query  662  CAAGAA  667
            ||||||
Sbjct  586  CAAGAA  591


 Score =  374 bits (202),  Expect = 1e-102
 Identities = 570/740 (77%), Gaps = 55/740 (7%)
 Strand=Plus/Plus

Query  748   CGGTCCTATGTACAGCCTTCCCTTT-AGTGAAC-CTAATGAGTCCCTTAGTCAATCCGAA  805
             ||||||| | ||||||||| ||||| | |  || || |||| | | || | | || ||||
Sbjct  651   CGGTCCTGTTTACAGCCTT-CCTTTCACT-CACTCTGATGAATTCATTGGCCGATTCGAA  708

Query  806   CCTCCGGTTTTGAAGGAGAGGATGTTCCATTTCTCATCAGAAACAGTGAGATCGCTGAAA  865
              | ||||| ||||||||||| || |||||||||||||| |||||| | | |||  |||||
Sbjct  709   TCACCGGTCTTGAAGGAGAGAATATTCCATTTCTCATCTGAAACAATAACATCATTGAAA  768

Query  866   TCAAAGGCGAATCAAGAATGCGGAACAACAA-TGATCTCTTCTTTTCAGGC-TCTGACCG  923
             |||||||| |||||||||||| ||||||||| | || ||||||||||| || | | || |
Sbjct  769   TCAAAGGCTAATCAAGAATGCAGAACAACAACT-ATTTCTTCTTTTCAAGCGT-TAACTG  826

Query  924   CATTGATATGGAGAAGCATTACAAGAGCAAGAAAACTACCAAATGATCAAGAAACTAC-T  982
             |||| ||||||||| | || ||||||||||||||| ||||  ||||||| |||| | | |
Sbjct  827   CATTTATATGGAGATGTATCACAAGAGCAAGAAAATTACCTTATGATCATGAAA-TTCGT  885

Query  983   TGCAGGTTTGCTGCTGGA-AACAGATCAAGAA-TGAATCCACCATTGCCGACGAATC-AA  1039
             || ||  |||| |||  | ||  || ||| || || |||||||||||||   | | | | 
Sbjct  886   TGTAGCCTTGCCGCT-AACAATGGAACAA-AATTGGATCCACCATTGCCTTTG-AGCTAT  942

Query  1040  TTTGG-AGTTTACATCTCT-CTTGTGAAA-ACGACTA-C-TAAAAT-CGGTAATCTACTG  1093
             ||||| |  ||  || ||| | | | |||  |||  | | | | || | || | ||||| 
Sbjct  943   TTTGGTA-ATTGTATTTCTGC-TAT-AAAGTCGAAGACCGTTACATCCAGTGAGCTACTA  999

Query  1094  GAGAATGAGTTT-GGATGGATTGCTTTGAAACTGCATCAAGCTGTTA-CCGAACACACTG  1151
             || ||||| ||| ||||||  |||||||||| ||||| ||||||| |   ||| ||||| 
Sbjct  1000  GAAAATGA-TTTGGGATGGGCTGCTTTGAAAATGCATAAAGCTGTGATTGGAA-ACACTA  1057

Query  1152  GCGAAAAGATCTCTTACGA-AATAGATCAAA-T-GTTGAAGTC-TCCTTTACCG-TTGCA  1206
             | ||| || ||||   ||| ||| ||  ||| | | |||| || | | |||  | || | 
Sbjct  1058  GTGAAGAGGTCTC-GGCGACAATCGA--AAATTGGATGAAATCAT-C-TTA-TGTTTTC-  1110

Query  1207  AGCATATCGACTTTCCAATTT--GAAC-A---TAGTTCACATGGGAAGTTCTCCAAGGTT  1260
               ||| | ||     |  |||  || | |   | |||||||| ||||| || || |||||
Sbjct  1111  --CATTTAGA-AAAGC-TTTTGGGAGCAATGGTGGTTCACATTGGAAGCTCGCCGAGGTT  1166

Query  1261  TAACAAGTACGGAA-GCGAGTTTGGGATGGGGAAAGCGGTGGCGGTTAGAAGCGGTTATG  1319
             ||| | |||  ||| |||||||||||||||| |||||||| |||||||||||||||||||
Sbjct  1167  TAAGATGTA-TGAATGCGAGTTTGGGATGGGAAAAGCGGTTGCGGTTAGAAGCGGTTATG  1225

Query  1320  GCGGTAAGTATGACGGGAAGGTATCAGCTTATCCAGGAAGACAAGGAGGAGCAAGTATAG  1379
             | ||||||| ||| |||||  ||||||||||| |||||||| ||||||||| ||| ||||
Sbjct  1226  GGGGTAAGTTTGATGGGAAAATATCAGCTTATGCAGGAAGAGAAGGAGGAGGAAGCATAG  1285

Query  1380  ATTTGGAAGTATGTCTACTTCCAGAGTTTATGGAAGCTTTGGAATCAGATCAAGAGTTCA  1439
             |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct  1286  ATTTGGAAGTATGTCTACTTCCAGAGTTTATGGAAGCTTTGGAATCAGATGAAGAGTTTA  1345

Query  1440  TGTCTCTTGTC-TCTTCTTC  1458
             |||||| || | ||||||||
Sbjct  1346  TGTCTCGTG-CATCTTCTTC  1364


> Ahg948948 jgi|Araly1|948948|scaffold_800835.1
Length=1367

 Score =  279 bits (151),  Expect = 3e-74
 Identities = 513/681 (75%), Gaps = 51/681 (7%)
 Strand=Plus/Plus

Query  802   CGAACCTCCGGTTTTGAAGGAGAGGATGTTCCATTTCTCATCAGAAA-CAGTGAGATCGC  860
             |||| |||| ||| | ||||| || ||||||  |||||||||||||| || | |||| ||
Sbjct  689   CGAATCTCCAGTTCTCAAGGAAAGAATGTTCTGTTTCTCATCAGAAACCA-TAAGATTGC  747

Query  861   TGAAATCAAAGG-CGAATCAAGA-ATGCGGAACAACAAT-GATCTCTTCTTTTCAGGCTC  917
             | ||| |||||| | || ||| | ||||||||| ||  |  || || ||||| ||| | |
Sbjct  748   TTAAAGCAAAGGTC-AACCAA-ATATGCGGAACTAC-CTCCATTTCATCTTTCCAGTCGC  804

Query  918   TGACCGC-ATTGATATGGAGAAGCATTACAAGAGCAAGAAAACTACCAAAT-GATCAAGA  975
             | |||||  || ||||||||| |||| ||||| ||| | | | ||||   | || | |||
Sbjct  805   TAACCGCGGTT-ATATGGAGATGCATAACAAGGGCACGGAGATTACC-CCTCGACCGAGA  862

Query  976   AACTACTTGCAGGTTTGCTGCTGGA-AACAGATCAAGAATGAATCCACC-ATTGC-CGAC  1032
             ||| | ||| ||  |||||||| || ||||||  ||||||| |||||||  || | | | 
Sbjct  863   AACAAGTTGTAGAATTGCTGCT-GACAACAGAGGAAGAATGTATCCACCGCTT-CACAAG  920

Query  1033  GAATCAATTTGGAGTTTACATCTC-TCTTGTGAAAACGACTACTAAAATC-GGTAATCT-  1089
             || | | ||||||   | | |||| |||| ||| |||| || | |||| | ||| | || 
Sbjct  921   GAGT-ACTTTGGAAACTGCCTCTCTTCTT-TGAGAACGGCTGC-AAAAGCTGGTGAGCTG  977

Query  1090  ACTGGAGAATGAGT-TTGGA-TGGATTGCTTTGAAACTGCATCAAGCTGTTA-CCGAACA  1146
             | |||||||||| | ||||| | |  |||||||||| |||||||||| | || | |||||
Sbjct  978   A-TGGAGAATGA-TCTTGGATTTG-CTGCTTTGAAAGTGCATCAAGC-GGTAGCTGAACA  1033

Query  1147  CACTGGCG-AAAAG-ATCTCTTACGAAATAGATCAAAT-GTTGAAGTCTCCTTTACCGTT  1203
              ||| | | ||||| |||||  | |  || |||| ||| ||| ||||| |||||  | ||
Sbjct  1034  TACTAGTGAAAAAGTATCTCAAATG--ATTGATC-AATGGTTAAAGTCCCCTTT--CATT  1088

Query  1204  GCAAGCATATCGACTTTCCAATTTGAA-C-AT-A--GTTCACATGGGAAGTTCTCCAAGG  1258
                | ||||| || |   |  |||||| | || |  |||   |||||||| || || |||
Sbjct  1089  --TACCATATTGA-TCGGCTTTTTGAACCGATGAGCGTTGTGATGGGAAGCTCACCGAGG  1145

Query  1259  TTTAACAAGTACGGAAGCGAGTTTGGGATGGGGAAAGCG-GTGGCGGTTAGAAGCGGTTA  1317
             ||||||||||| ||  | || ||||||||||| |||| | ||| |  | ||||| || ||
Sbjct  1146  TTTAACAAGTATGGTTGTGAATTTGGGATGGGAAAAG-GAGTGACACTAAGAAGTGGCTA  1204

Query  1318  TGGCG-GTAAGTATGACGGGAAGGTATCAGCTTATCCAGGAAGACAAGGAGGAGCAAGTA  1376
               |||  ||||| ||| || |||||||| ||||| || |||||| ||||||| | |||||
Sbjct  1205  -CGCGCATAAGTTTGATGGAAAGGTATCTGCTTACCCGGGAAGAGAAGGAGGGGGAAGTA  1263

Query  1377  TAGATTTGGAAGTATGTCTACTTCCAGAGTTTATGGAAGCTTTGGAATCAGATCAAGAGT  1436
             |||||||||| ||||||||  |||||||||||||||||||||||||||||||| ||||||
Sbjct  1264  TAGATTTGGAGGTATGTCTTGTTCCAGAGTTTATGGAAGCTTTGGAATCAGATGAAGAGT  1323

Query  1437  TCATGTCTCTTGTCTCTTCTT  1457
             | ||||| ||||| ||| |||
Sbjct  1324  TTATGTCACTTGTTTCT-CTT  1343



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 57363908970


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5