BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G07970.1
Length=3741
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487630 jgi|Araly1|487630|fgenesh2_kg.6__764__AT5G07970.1 2346 0.0
Ahg487631 jgi|Araly1|487631|fgenesh2_kg.6__765__AT5G07980.1 1742 0.0
Ahg487627 jgi|Araly1|487627|fgenesh2_kg.6__761__AT5G07940.1 1648 0.0
> Ahg487630 jgi|Araly1|487630|fgenesh2_kg.6__764__AT5G07970.1
Length=3202
Score = 2346 bits (1270), Expect = 0.0
Identities = 1458/1545 (94%), Gaps = 28/1545 (2%)
Strand=Plus/Plus
Query 602 CTCTAGACCGTCATAAAACTCCTATGAGGTTTGATATGGGAGAATCTCCGGTTAACTATG 661
||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 209 CTCCAGACCATCATAAAACTCCTATGAGATTTGATATGGGAGAATCTCCGGTTAACTATG 268
Query 662 ATTTCTTTGGTGGTCAACAACAATTAAACAATCAGCTCCCTGGCATGATCCAACCTTTTC 721
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 269 ATTTCTTTGGTGGTCAACAACAATTAAACAATCAGCTCCCTGGCATGCTCCAACCTTTTC 328
Query 722 CAAGGCAGCAGATGACATTCAATGATATGCAACTACTAAAGCAACACGCTATGGCTAAGC 781
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 329 CAAGGCAGCAGATGACATTCAATGATATGCAACTACTAAAGCAACACGCTATGGTTAAGC 388
Query 782 AAATGCATGAATATCAAATTCAACAACAACTTCAAAAGCAACAGCTAGAAGCCAGGCAGC 841
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 389 AAATGCATGAATATCAAATGCAACAACAACTTCAAAAGCAACAGCTAGAGGCCAGGCATC 448
Query 842 TCAATTCTTTGCATTCAAACGCAGTCAATGGAAGTCTCTCAAGTGATAACCAATCACATC 901
||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 449 TCAATTCTTTGAATTCAAACGCAGTCAATGGAAGTCGCTCAAGTGATAGCCAATCACATC 508
Query 902 CTTCGATTAGTGGTGTCCCTCTACAGGATGCGTCTAATAATTGGTTGCAACCAGATCTTA 961
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 509 CTTCGATTAGTGGTGTCCCTCTACAGGATGCGTCTAATAATTGGTTGCAGCCAGATCTTA 568
Query 962 TGACAGGAAATACAAACTGGATGCATCGCGGCATCTCGCCAATTGTTCAAAGTTCATCCA 1021
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 569 TGACAGGAAATACAAACTGGATGCATCGCGACATCTCCCCAATTGTTCAAAGTTCATCCA 628
Query 1022 GTGGGCTCGTGATTACCCCTGAGCATGGACATGCAAACTTAATGGCACAACAATTTGAAA 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 GTGGGCTCGTGATTACCCCTGAGCATGGACATGCAAACTTAATGGCACAACAATTTGAAA 688
Query 1082 CTTCCTTGTACGGTATGCCTGTTGGTGGGACAGATGCTCCTCAAAATGCCTTTTCTTCCT 1141
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 689 CTTCCTTGTACGGTATGCCAGTTGGTGGGACAGATGCACCTCAAAATGCCTTTTCTT-CT 747
Query 1142 -TTCAGATGAAAATGTTAGCTGCACAGCATGGTTCTGCAAACATGAGTTCCTCTCTCACT 1200
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 GTTCAGATGAACATGTTAGCTGCACAGCATGGTTCTGCAAACATGAGTTCCTCTCTCACT 807
Query 1201 AATCAGCCAACATCATTTCTGAATC-A-A--A-GT----GACAGTCATATGCTCCCTAGA 1251
||||||||| | ||||||||||||| | | | || |||||||||||||||||||||
Sbjct 808 AATCAGCCAGCGTCATTTCTGAATCAAGATGACGTACAGGACAGTCATATGCTCCCTAGA 867
Query 1252 TCCACATACCAGGAGAATCTGTACTCCCA--TAT-ATCAGTTCCAGGTTCAAATGATAGG 1308
|||||||||||||||||||||| |||||| ||| ||||||||||||||| | | |
Sbjct 868 TCCACATACCAGGAGAATCTGTTCTCCCATTTATCATCAGTTCCAGGTTC--A--A-A-- 920
Query 1309 CCTAATTTTGAAAGTTTTCAGCAAGATAATTCTGGTCAGCAGAATATTTCAGGGCAGGAA 1368
|||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 921 --TAATGTTGGAAGTTTTCAGCAAGATAATTCCGGTCAGCAGAACATTTCAGGGCAAGAA 978
Query 1369 GAATTTGGTCAGATGGATGGTTCTGGTCTATCTGAAAAATCATTTATGAAAGTGCCTGAA 1428
||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 979 GAATTTGGTCAAATGGAGGGTTCTGGTCTATCAGAAAAATCATTTATGAAAGTGCCTGAA 1038
Query 1429 AATATAAATACATTGCAGAAGTCGACAACATTAGATCCAACAGAGGAAAAGATTTTGTTT 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1039 AATATAAATACATTGCAGAAGTCGACAACATTAGATCCAACAGAGGAAAAGATTTTGTTT 1098
Query 1489 GGTTCGGATGACAATTTGTGGGAGGCATTTGGAAACAGTACTGATATGAGCTTGACAGGA 1548
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1099 GGTTCGGATGACAATTTGTGGGAGGCATTTGGAAACAGCACTGATATGAGCTTGACAGGA 1158
Query 1549 AATCTTATGTCCAGTAGTTCTGACCTTTTTGATGCATGCCCCTCTTTGCAAAGTGGGAGT 1608
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1159 AATCTTATGTCTAGTAGTTCTGACCTTTTTGATGCTTGCCCCTCTTTGCAAAGTGGGAGT 1218
Query 1609 TGGAGTGCTCTTATGCAATCTGCTGTAGCAGAAACAGCCAGTGATGACGCAGGTGTACAT 1668
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 1219 TGGAGTGCTCTTATGCAATCTGCTGTAGCAGAAACATCCAGTGATGACGCAGGCGTACAT 1278
Query 1669 GAATGGGGTAGTAAACAGCAATCTGTATGGGCTAACAACATTAATGCCCCACATCCAGAT 1728
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1279 GAATGGGGTAGTAAACAGCAATCTGTATGGGCTAACAACATTACTGCCCCACATGCAGAT 1338
Query 1729 TCTCGTATTGGTAATAGGGCCCAGGTTTCTGGTGGCCATACTGATTCAACCCGTTCAACT 1788
||||||||||||||||||||||||| |||||| ||||| ||||||||| || ||||||
Sbjct 1339 TCTCGTATTGGTAATAGGGCCCAGGAGTCTGGTCTCCATAGTGATTCAACTCGATCAACT 1398
Query 1789 GTTCAACATTTGCAAGACAAAGGAAATATTGTTTCAGATCATGGCCTGTTGGAGAAGCCA 1848
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 1399 GTTCAACATTTGCAAGACAAAGGAAATATGGTTTCAGATCATGGCCTGTTGGAGAAGACA 1458
Query 1849 ATGACTCCGCAGAGTCAAATGGCTGGAAATATGTTTCAATCTTTAAGTTCTGGTATTGAT 1908
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1459 ATGACTCAACAGAGTCAAATGGCTGGAAATATGTTTCATTCTTTAAGTTCTGGTATTGAT 1518
Query 1909 GTGCAGAATAATTCGTGTTCTATTGGAAAGAATGAGGACATTGATGATAGACTTGGTAAC 1968
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1519 ---CAGAATAATTCGTGTTCTATTGGAAAGAATGAGGACATTGATGATAGACTTGGTAAC 1575
Query 1969 TGGAGGGGTGCTTCCAATCCAAACTCAGCTGCTCTGATGGAACGGAAGAATCATTTTACT 2028
|||| || ||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1576 TGGAAGGCTGCTTCCAATCCAAACTCAGCTGCTCTGATGGAACAGAAGAATCATTTAACA 1635
Query 2029 CAAAATCTACAAATG-CAAAGGGCAAGCTATGGTGCAGGAGATGATTCTAGAGCTTCGAG 2087
|||||||||||| || ||||||| || ||||||| ||||| |||||||||| ||||||||
Sbjct 1636 CAAAATCTACAA-TGGCAAAGGGAAATCTATGGTACAGGAAATGATTCTAGCGCTTCGAG 1694
Query 2088 GGATATCCAGCAAAATATCCAACATCATTTGGATAATAACTCTGT 2132
|||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1695 GGATATCCAGAAAAATATCCAACAGCATTTGGATAATAACTCTGT 1739
Score = 2231 bits (1208), Expect = 0.0
Identities = 1382/1466 (94%), Gaps = 11/1466 (1%)
Strand=Plus/Plus
Query 2282 TCTCACCAGAGTCTCTTACTCAAGTGAATGCCCGTGATTTGTCTGTGTTGCCTGGTGGGA 2341
||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct 1739 TCTCACCAGAGTCTCTTACTCAAGTAAATGCCCATGATTTTTCTGTGTTGCCTGGTGGGA 1798
Query 2342 AAGAAACACAATCACCTTCAAGATCTGATGGTTTAATTAGGGATGGATTGAATCACAAAG 2401
||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||
Sbjct 1799 AAGAAACACAATCACCTTCAAGATCTGATAGTTTAGTTAGGGTTGGATTTAATCACAAAG 1858
Query 2402 ATTCAGCGAATTGCATGCTGCAGTTTGGCCCAACTATTTCTCAGAGTTTCTTCAACAAGA 2461
| |||||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||
Sbjct 1859 AATCAGCGAATTATATGCTGCATTTTGGCCAAACTGTTTCTCAGAGTTTCTTCAACAAGA 1918
Query 2462 ATCATGCAGTCTCGGCTGGATCAGATCATCAACAAATCAGTCCTCAAATAGCTCCATCCA 2521
|||||| || |||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 1919 ATCATGGAGCCTCGGCTGGAGCAGATCATCTACAAATCAGTCCTCAAATAGCTCCATCCA 1978
Query 2522 GGTTTAGTCAATATGAGGCTTTTAAGAACGGACTGGTGCAACCCGTGAATGATACAGGGA 2581
|| ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1979 AGTATAGTCTATATGAGGCTTTCAAGAACGGACTGGTGCAACCCATGAATGATACAGGGA 2038
Query 2582 GATTCACTCTCTTGAAGATAGGAGAACGATATTCTAACCTTGGGAATTCTGATGATGGTT 2641
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2039 GATTCACTCTCATGAAGATAGGAGAACGATATTCTAACCTTGGGAATTCTGATGATGGTT 2098
Query 2642 TACATTCTGTTCAATCGTCAAAGCAATTAAATACTGCGGATCCTGGTTACATTGTTCATA 2701
||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 2099 TACATTCTGTTCAATTGTCAAAGCAATCAAATACTGCGGATCCTGGTTACGTTGTTCATA 2158
Query 2702 TGCAGCAAATATCAGGCTCCACACCAGGAGTGGAGACTCTCTCATCTGCCTCATTGCCTT 2761
| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2159 TTCAGCAAATGTCAGGCTCCACACCAGGAGTGGAGACTCTCTCATCTACCTCATTGCCTC 2218
Query 2762 GTGGTGCTACTGACCAACTTCTAAAGGTTTATAAACCAAAGAAGCGCAAAAACGTCACAT 2821
||||||||||||||||||||| |||||| ||||||||||||||||||||| || | |||
Sbjct 2219 ATGGTGCTACTGACCAACTTCTGAAGGTTGATAAACCAAAGAAGCGCAAAACCGCCTCAT 2278
Query 2822 CAGAACTTTTATCTTGGAGTAAAGAAGTTATGCAACGTCCCCAGAGGCTTAAGACTCTCG 2881
||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 2279 CAGGACTTTTATCTTGGAATAAAGAAGTTATGCAAGGTCCCCAGAGGCTTAAGACTCTCG 2338
Query 2882 GTGAGGCCGAGGTTGATTGGGCCAGAGCAACTAATCGATTTGCTGAAAAAGTGGAATTTG 2941
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2339 GTGAGGCCGAGGTTGATTGGGCCAGAGCAACGAATCGATTTGCTGAAAAAGTGGAATTTG 2398
Query 2942 CGACTTTACTTGAGGATGGCCCACCAATCAGATCAAAGAGAAGGCTTATATATACAACAC 3001
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2399 CAACTTTACTTGAGGATGGCCCACCAACCAGATCAAAGAGAAGGCTTATATATACAACAC 2458
Query 3002 AACTCATGCAACAACTGTTTCGTCCCCTTCCTGGTAGGGTGAAA-TCTTTAGTTACTAG- 3059
||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||
Sbjct 2459 AACTCATGCAACAACTGTTTCGTCCCCTTCCTGATAGGGTGAAAGT-TTTAGTTGCTAGC 2517
Query 3060 -C----TATGAGTTTGTGGCATATTCTGCTGCTAGAGCTGCGCTAGGAGATGCATGTAGC 3114
| ||||||||||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct 2518 TCAAATTATGAGTTTGTTGCTTATACTGCTGCTAGAGCTGCGCTAGGAGATGCATGTAGC 2577
Query 3115 TCCACTTCTACTGACAGGATTGAGGGCTTTTTGCTTCAGAACAATTTAAACCCGTTGTCT 3174
|||||||||||||||||| |||||||||||| || | |||||||| |||||||||||||
Sbjct 2578 TCCACTTCTACTGACAGGGTTGAGGGCTTTTCGCCCCCGAACAATTCAAACCCGTTGTCT 2637
Query 3175 GAGAGAACGGAAACTGAAAAAATGAGTGACCAATACATCTCCAAAGCAGCTGAAGATTTC 3234
||| |||||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct 2638 GAGGGAACGGAAACTGAAAAGATGAGTGATCAGTACATCTCCAAAGCAGCTGAAGATTTC 2697
Query 3235 ATTAGTAGAACAAAGAAACTAGAGACTGACTTTGCAGGACTAGAAAAAGGAACTACAATT 3294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2698 ATTAGTAGAACAAAGAAACTAGAGACTGACTTTGCAGGACTAGAAAAAGGAACTACAATT 2757
Query 3295 ACAGACTTGAGAGTCGAAGTCCAGGATCTAGAGAGGTTTGCAGTGATCAATCGTTTTGCA 3354
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2758 ACAGATTTGAGAGTCGAAGTCCAGGATCTAGAGAGGTTTGCAGTGATCAATCGTTTTGCA 2817
Query 3355 AGTTTCCACCAATCGTCCTCATCTATGGACCGGTCCGTGAGTTCACTTAGGTTAAACCCA 3414
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2818 AGTTTCCACCAATCGTCCTCATCTATGGACCGGTCTGTGAGTTCACTTAGGTTAAACCCA 2877
Query 3415 CAGAGATATGTTACCGTAGCTCCAGTGCCTCGGCATATTCCAGATAGGGTACAATGTCTC 3474
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 2878 CAGAGATATGTTACCGTAGCTCCAATGCCTCGGCATATTCCAGACAGGGTACAATGTCTC 2937
Query 3475 TCTTTCTAACTATTGATAGATCCATATAATTAACTTTTTGGCCAATCCTCCCGAAAATGT 3534
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2938 TCTTTCTAACTATTTATAGATCCATATAATTCACTTTTTGGCCAATCCTCCCGAAAATGT 2997
Query 3535 TTGTGTTTATGGGTGGGTAAGAGTTAGTTGGTCGGACTTCTGAGAACAGTGAAGGCCTCC 3594
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2998 TTGTGTTTATGGGTGGGTACGAGTTAGTTGGTCGGACTTCTGAGAACAGTGAAGGCCTCC 3057
Query 3595 ATCGTCAGAAGGCCGGAGATTTCGTAGTAGACATGTAGCATTACTGTATGCTTAATCACG 3654
||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 3058 ATCTTCAGGAGGCCGGAGATTTCGTAGTAGACATGTAGCATTACTGTATGCATAATCAAG 3117
Query 3655 AATATTGGATGTCAAATCCATTTGTATACTTAGTAAAGA-A-TTTGCCCCATAACAGAAA 3712
|||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||
Sbjct 3118 AATATTGGATGTCAAATCCACATGTATACTTAGTAAAGATAATTTGCCC-ATAACAGAAA 3176
Query 3713 TTCCACAAGGTAACAACTCCAGTGAA 3738
| ||||||||||||| ||| ||||||
Sbjct 3177 TCCCACAAGGTAACACCTCTAGTGAA 3202
Score = 311 bits (168), Expect = 3e-83
Identities = 198/213 (93%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 322 AGGCAGATTGACCCATCACTTATTGCCAATCTGAAGACGTATAGCACTCAACAATCCGTT 381
|||||||||||||||||||||| ||||||||||||||| ||||| || |||||||| |||
Sbjct 1 AGGCAGATTGACCCATCACTTAATGCCAATCTGAAGACTTATAGTACACAACAATCTGTT 60
Query 382 GATCCTGAGAGAGGACAATCTTCAAATTCACAGCATGGTTTAAATTTTGCCCAGCAGCCA 441
|||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||
Sbjct 61 GATCCTGAGAGAGGACAATCGTCAAATTCACAGCATGGTTTGAATTTTACTCAGCAGCCT 120
Query 442 ATGAGGTCCGATTACTCCAGAAGTGTATTGCGAGAACACCAGCAATCCACAACTGGTTAC 501
|||||||| ||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 121 ATGAGGTCTGATTATTCCAGAAGTGTATTGCGAGAACACCAGCAATCCATAAATGGTTAT 180
Query 502 ATGCATGGAAACCTTATGTTGCAGGCATCTCCA 534
|||||||||||||||||||||||||||||||||
Sbjct 181 ATGCATGGAAACCTTATGTTGCAGGCATCTCCA 213
> Ahg487631 jgi|Araly1|487631|fgenesh2_kg.6__765__AT5G07980.1
Length=4757
Score = 1742 bits (943), Expect = 0.0
Identities = 1326/1506 (88%), Gaps = 46/1506 (3%)
Strand=Plus/Plus
Query 190 ATGCCTGGAAACGAATATGGAGAGAGGATCCACAATTTCTTTGGACAGGAGGGCCTATCC 249
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCTGGAAACGAATTTGGAGAGAGGATCCACAATTTCTTTGGACAGGAGGGCCTATCC 60
Query 250 CAAGA-CAGCCATCAGCCTCAGGCAGGAGATGGAAGCTGGTCCGGTTTTAGAAATGGTCT 308
||||| ||| |||||| |||||| | || ||||| |||||| ||||||| |||||||
Sbjct 61 CAAGACCAG-CATCAGTCTCAGGTTGTTGACGGAAGTTGGTCCAGTTTTAGTGATGGTCT 119
Query 309 AGTCAGCAACCAGAGGCAGATTGACCCATCACTTATTGCCAATCTGAAGACG-TATAGCA 367
|||| |||||||||||||||| |||||||| | ||||||||||||||||| | |||||||
Sbjct 120 AGTCGGCAACCAGAGGCAGATAGACCCATCCCCTATTGCCAATCTGAAGA-GTTATAGCA 178
Query 368 CTCAACAATCCGTTGATCCTGAGAGAGGACAATCTTCAAATTCACAGCATGGTTTAAATT 427
| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 179 CACAACAATCTGTTGATCCTGAGAGAGGGCAATCTTCAACTTCACAGCATGGTTTAAATT 238
Query 428 TTGCCCAGCAGCCAATGAGGTCC-GATTACTCCAGAAGTGTATTGCGAGAACACCAGCAA 486
|| | |||||||| |||||| || || |||||||||| |||||| | ||||| |||||||
Sbjct 239 TTACTCAGCAGCCTATGAGG-CCTGAGTACTCCAGAACTGTATTACAAGAACCCCAGCAA 297
Query 487 TCCACAACTGGTTACATGCATGGAAACCTTATGTTGCAGGC-ATCTCCAAATGAGGGAAG 545
|||||| ||||||||||| ||| |||||| ||||||| | || || ||||||| ||
Sbjct 298 CCCACAAATGGTTACATGCGTGGCAACCTTGGGTTGCAGACGAT-GCCGAATGAGGCAAA 356
Query 546 TTTTGTGGGAGTGGATGTAGAATCTAGTAGGGATAGGTTATCAGGGAGTGGATTCACTCT 605
|||| ||||| ||||||||||||| |||||||||||||| |||| ||| ||||||||||
Sbjct 357 TTTTTTGGGAATGGATGTAGAATCGAGTAGGGATAGGTTGTCAGCGAGAGGATTCACTCC 416
Query 606 AGACCGTCATAAAACTCCTATGAGGTTTGATATGGGAGAATCTCCGGTTAACTATGATTT 665
||||| ||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||
Sbjct 417 AGACCTTCATAAATTTCCTACGAGGTTTGAGATGGGAGAATCTCCGGTTAATTATGATTT 476
Query 666 CTTTGGTGGTCAACAACAATTAAACAATCAGCTCCCTGGCATGATCCAACCTTTTCCAAG 725
||||||||||||||||| || ||| | | | || | | | ||||| |||||
Sbjct 477 CTTTGGTGGTCAACAAC----AACCAA--A--T-AC--ACA-GCT-C--CCTTTGCCAAG 521
Query 726 GCAGCAGATGACATTCAATGATATGCAACTACTAAAGCAACACGCTATGGCTAAGCAAAT 785
||||||||||||||||||||| ||||||||| | ||||| || | ||||| |||||||||
Sbjct 522 GCAGCAGATGACATTCAATGACATGCAACTAATGAAGCAGCAAGTTATGGTTAAGCAAAT 581
Query 786 GCATGAATATCAAATTCAACAACAACTTCAAAAGCAACAGCTAGAAGCCAGGCAGCTCAA 845
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 ACATGAATATCAAATGCAACAACAACTTCAAAAGCAACAGCTAGAAGCCAGGCAGCTCAA 641
Query 846 TTCTTTGCATTCAAACGCAGTCAATGGAAGTCTCTCAAGTGATAACCAATCACATCCTTC 905
||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| |
Sbjct 642 TTCTTTGAATTCAAATGCAGTCAATGGAAGTCGCTCAAGTGATAACCAATCACATA-T-- 698
Query 906 GATTAGTGGTGTCCCTCTACAGGATGCGTCTAATAATTGGTTGCAACCAGATCTTATGAC 965
||||| ||| ||||||| ||||||||||||| ||| |||||||| |||||||| |||||
Sbjct 699 GATTAATGGCATCCCTCTTCAGGATGCGTCTAGTAACTGGTTGCAGCCAGATCTCATGAC 758
Query 966 AGGAAATACAAACTGGATGCATCGCGGCATCTCGCCAATTGTTCAAAGTTCATCCAGTGG 1025
|||||||||||||||||||||||||||||| || ||| |||||||| ||||||||| |||
Sbjct 759 AGGAAATACAAACTGGATGCATCGCGGCATATCTCCAGTTGTTCAAGGTTCATCCACTGG 818
Query 1026 GCTCGTGATTACCCCTGAGCATGGACATGCAAACTTAATGGCACAACAATTTGAAACTTC 1085
|||| |||||||| |||||||||| || || ||||||||||| |||||||||||| ||||
Sbjct 819 GCTCATGATTACCTCTGAGCATGGGCAGGCGAACTTAATGGCTCAACAATTTGAACCTTC 878
Query 1086 CTTGTACGGTATGCCTGTTGGTGGGAC-AGATGCTCCTCAAAATGCCTTTTCTTCCTTTC 1144
||||||||||||||||||| ||||||| | |||| ||||| ||| ||||||||||| |
Sbjct 879 CTTGTACGGTATGCCTGTTAGTGGGACTA-ATGCACCTCACAATACCTTTTCTTCCAGCC 937
Query 1145 AGATGAAAATGTTAGCTGCACAGCATGGTTCTGCAAACATGAGTTCCTCTCTCACTAATC 1204
||||||| | ||||||||| ||||||||||||||||||| || ||||||| |||||||||
Sbjct 938 AGATGAACAGGTTAGCTGCGCAGCATGGTTCTGCAAACAGGATTTCCTCTGTCACTAATC 997
Query 1205 AGCCAACATCATTTCTGAATCAAAGTGA----CAG--T---CATATGCTCCCTAGATCCA 1255
| || || |||| |||||||||| |||| ||| | |||||||||||||||||||
Sbjct 998 AACCTACTTCATATCTGAATCAAGGTGATGTACAGGATAGTCATATGCTCCCTAGATCCA 1057
Query 1256 CATACCAGGAGAA-TC-T-GTACTCCCATATATCAGTTCCAGGTTCAAATGA-TAGGCCT 1311
||||||||||||| | | || |||||| | |||||||||| ||||||| || || |||
Sbjct 1058 CATACCAGGAGAAATTATTGTTCTCCCAGACATCAGTTCCAAGTTCAAA-GAGTATGCCC 1116
Query 1312 AATTTTGAAAGTTTTCAGCAAGATAATTCTGGTCAGCAG-AATATTTCAGGGCAGGAAGA 1370
|| ||||| ||||| |||||||||||||| || | || || ||||||| |||| ||
Sbjct 1117 AACTTTGATAGTTTACAGCAAGATAATTCCCGTGAA-AGGAACATTTCAGTCCAGGC-GA 1174
Query 1371 A-TTTGGTCAGATGGATGGTTCTGGTCTATCTGAAAAATCATTTATGAAAGTGCCTGAAA 1429
| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1175 AATTTGGTCAGATGGAGGGTTCTGGTCCATCAGAAAAATCATTTATGAAAGTGCCTGAAA 1234
Query 1430 ATATAAATACATTGCAGAAGTCGACAACATTAGATCCAACAGAGGAAAAGATTTTGTTTG 1489
|||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 ATATAAATGCAGTGCAGAAATCGACAACATTAGATCCAACAGAGGAAAAGATTTTGTTTG 1294
Query 1490 GTTCGGATGACAATTTGTGGGAGGCATTTGGAAACAGTACTGATATGAGCTTGACAGGAA 1549
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1295 GTTCGGATGACAATTTGTGGGAGGCATTTGGAAACAGCACTGATATGAGCTTGACAGGAA 1354
Query 1550 ATCTTATGTCCAGTAGTTCTGACCTTTTTGATGCATGCCCCTCTTTGCAAAGTGGGAGTT 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1355 ATCTTATGTCCAGTAGTTCTGACCTTTTTGATGCATGCCCCTCTTTGCAAAGTGGGAGTT 1414
Query 1610 GGAGTGCTCTTATGCAATCTGCTGTAGCAGAAACAGCCAGTGATGACGCAGGTGTACATG 1669
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 1415 GGAGTGCTCTTATGCAATCTGCTGTAGCAGAAACATCCAGTGATGACGCAGGCGTACATG 1474
Query 1670 AATGGG 1675
||||||
Sbjct 1475 AATGGG 1480
Score = 1149 bits (622), Expect = 0.0
Identities = 1015/1197 (85%), Gaps = 57/1197 (5%)
Strand=Plus/Plus
Query 2349 ACAATCACCTTCAAGATCTGATGGTTTAATTAGGGATGGATTGAATCACAAAGATTCAGC 2408
|||||||||||||||||||||||||||| |||| |||||||||||||||| || |||||
Sbjct 3393 ACAATCACCTTCAAGATCTGATGGTTTAGTTAGAGATGGATTGAATCACAGGGAATCAGC 3452
Query 2409 GAATTGCATGCTGCAGTTTGGCCCAACTATTTCTCAGAGTTTCTTCAAC-AAGAATCATG 2467
||| ||| | | | ||||||| || | ||||||||||||||| || | |||||||||
Sbjct 3453 GAACCACATACCGTATTTTGGCCAAAATGTTTCTCAGAGTTTCTCCA-CTAAGAATCATT 3511
Query 2468 CAGTCTCGGCTGGATCAGATCATCAACAAATCAGTCCTCAAATAGCTCCATCCAGGTTTA 2527
||| ||| |||||| ||||||||||||||||||||||||| || ||||||||| ||| ||
Sbjct 3512 CAGCCTCAGCTGGAGCAGATCATCAACAAATCAGTCCTCAGATGGCTCCATCCTGGTATA 3571
Query 2528 GTCAATATGAGG-CTTTTAAGAACGGACTGGTGCAACCCGTGAATGATACAGGGAGATTC 2586
||||||||| || |||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3572 GTCAATATG-GGACTTTCAAGAATGGACTGGTGCAACCTGTGAATGATACAGGGAGATTC 3630
Query 2587 ACTCTCTTGAAGATAGGAGAACGATATTCTAACCTTGGGAATTCTGATGATGGTTTACAT 2646
|| | ||| ||||||||||||| || ||||| |||||| ||| | || ||| ||||
Sbjct 3631 ACCCCCTTAAAGATAGGAGAACAATCGTCTAATGTTGGGAGTTCAGTTGCTGGC--ACAT 3688
Query 2647 --TCTGTTCAATCGTCAAAGCAATTAAATACTGCGGATCCTGGTTACATTGTTCATATGC 2704
|||||||||||| || |||| || |||| ||| | | | || || || |
Sbjct 3689 ACTCTGTTCAATCGCCACAGCACTTTAATA-TGCAG--CA-----A-AT-GT-CA---G- 3733
Query 2705 AGCAAATATCAGGCTCCACACCAGGAGTGGAGACTCTCTCATCTGCCTCATTGCCTTGTG 2764
|| | | | |||| ||||| || | || |||||||| ||||||||| ||
Sbjct 3734 -GC---T--C---C---ACACTAGGAGCAGATATTCCCTCATCTGAGTCATTGCCTCATG 3781
Query 2765 GTGCTACTGACCAACTTCTAAAGGTTTATAAACCAAAGAAGCGCAAAAACGTCACATCAG 2824
|||||||||| |||||||| |||||| ||||||||||||||||||||| || ||||||||
Sbjct 3782 GTGCTACTGAACAACTTCTGAAGGTTAATAAACCAAAGAAGCGCAAAACCGCCACATCAG 3841
Query 2825 AACTTTTATCTTGGAGTAAAGAAGTT-ATGCAACGTCCCCAGAGGCTTAAGACTCTCGGT 2883
||||| || |||||| ||||||| || ||||| ||| ||||||||||||||||||||||
Sbjct 3842 AACTTCTACCTTGGAATAAAGAA-TTCATGCAGGGTCACCAGAGGCTTAAGACTCTCGGT 3900
Query 2884 GAGGCCGAGGTTGATTGGGCCAGAGCAACTAATCGATTTGCTGAAAAAGTGGAATTTGCG 2943
||||| || |||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 3901 GAGGCTGAAGTTGATTGGGCCAGAGCAACCAATCGATTTGCTGAAAAAGTGGAATTTGAG 3960
Query 2944 ACTTTACTTGAGGATGGCCCACCAATCAGATCAAAGAGAAGGCTTATATATACAACACAA 3003
||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3961 ACTTTACTTGAGGATAGCCCACCAATCAAATCAAAGAGAAGGCTTATATATACAACACAT 4020
Query 3004 CTCATGCAACAACTGTTTCGTCC-CCTTCCTGG-TAGGGTGAAATCTTTAGTTACTAGCT 3061
|||||||||||||| ||| |||| ||| || || |||||||| |||||| ||| | ||||
Sbjct 4021 CTCATGCAACAACTATTTAGTCCGCCT-CC-GGCTAGGGTGATATCTTTGGTTGCCAGCT 4078
Query 3062 -A--T---GAGTTTGTGGCATATTCTGCTGCTAGAGCTGCGCTAGGAGATGCATGTAGCT 3115
| | |||||||| |||||| || |||| |||| ||| |||||||||||||||||||
Sbjct 4079 CAAATTATGAGTTTGTTGCATATACTACTGCAAGAGGTGCACTAGGAGATGCATGTAGCT 4138
Query 3116 CCACTTCTACTGACAGGATTGAGGGCTTTTTGCTTCAGAACAATTTAAACCCGTTGTCTG 3175
||| || ||| ||||||| |||||||| || || | |||||||| ||||||||||||||
Sbjct 4139 CCAATTGTACCGACAGGAGTGAGGGCTATTCGCCCCCGAACAATTCAAACCCGTTGTCTG 4198
Query 3176 AGAGAACGGAAACTGAAAAAATGAGTGACCAATACATCTCCAAAGCAGCTGAAGATTTCA 3235
|||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 4199 AGAGAACGAAAACTGAGAAAATCAGTGACCAGTACATCTCCAAAGCAGCTGAAGATTTCA 4258
Query 3236 TTAGTAGAACAAAGAAACTAGAGACTGACTTTGC-AGGACTAGAAAAAGGAACTACAATT 3294
||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct 4259 TTAGTAGAACACGGAAACTAGAGACTGACTTTGCCAGGT-TAGAAAATGGAACTACAATT 4317
Query 3295 ACAGACTTGAGAGTCGAAGTCCAGGATCTAGAGAGGTTTGCAGTGATCAATCGTTTTGCA 3354
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 4318 CCAGACTTGAGAGTTGAAGTCCAGGATCTAGAGAAGTTTGCAGTGATCAATCGTTTTGCA 4377
Query 3355 A-GTTTCCACCAATCGTCCTCATCTATGGACCGGTCCGTGAGTTCACTTAGGTTAAACCC 3413
| ||| ||||| | | |||||||||||||||||| | |||| ||||||||||||||||||
Sbjct 4378 AAGTT-CCACCCACCATCCTCATCTATGGACCGGACGGTGAATTCACTTAGGTTAAACCC 4436
Query 3414 ACAGAGATATGTTACCG-TAGCTCCAGTGCCTCGGCATATTCCAGATAGGGTACAATGTC 3472
||| ||||||||||| | |||||||| |||||| | |||||||||| |||||||||||||
Sbjct 4437 ACAAAGATATGTTAC-GATAGCTCCAATGCCTCAGAATATTCCAGACAGGGTACAATGTC 4495
Query 3473 TCTCTTTCTAACTATTGATAGA-TCCATATAATTA--ACTTTTTGGCCAATCCTCCC 3526
|||| |||||| | |||| || |||||||| || ||||||||||||||| ||||
Sbjct 4496 TCTCGCTCTAACCAATGAT-GAATCCATATATTTTTCACTTTTTGGCCAATCTTCCC 4551
> Ahg487627 jgi|Araly1|487627|fgenesh2_kg.6__761__AT5G07940.1
Length=5136
Score = 1648 bits (892), Expect = 0.0
Identities = 1341/1552 (86%), Gaps = 53/1552 (3%)
Strand=Plus/Plus
Query 157 AGATATTTAT-AATAATTTATCGGAGCTGAATCTATGCCTGGAAACGAATATGGAGAGAG 215
||||| |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 198 AGATAATTATAAATAGTTTATCGGAGCTGAATCTATGCCTGGAAACGAATTTGGGGAGAA 257
Query 216 GATCCACAATTTCTTTGGACAGGAGGGCCTATCCCAAGA-CAGCCATCAGCCTCAGGCAG 274
||||||||||||||||||||| || ||||| |||||||| || ||||| |||||| |
Sbjct 258 GATCCACAATTTCTTTGGACAAGAAGGCCTCTCCCAAGACCA-AAATCAGTCTCAGGTTG 316
Query 275 GAGATGGAAGCTGGTCCG-GTTTTAGA-AATGGTCTAGTCAGCAACCAGAGGCAGATTGA 332
|| |||||||||| || || || | ||||||||| || | |||||||| || || ||
Sbjct 317 TTGACGGAAGCTGGT-CGAATTATA-ATAATGGTCTACTCGGTAACCAGAGCCACATAGA 374
Query 333 CCCATCACTTATTGCCAATCTGAAGACG-TATAGCACTCAACAATCCGTTGATCCTGAGA 391
|||||| ||||||||||||||||||| | |||| ||| |||||||| ||||||| |||||
Sbjct 375 CCCATCCCTTATTGCCAATCTGAAGA-GTTATAACACACAACAATCTGTTGATCATGAGA 433
Query 392 GAGG--A-CAATCTTCAAATTCACAGCATGGTTTAAATTTTGCCCAGCAGCCAATGAGGT 448
|||| | ||||||||||| |||||||||||||| |||| | | |||||||| || ||||
Sbjct 434 GAGGTCATCAATCTTCAAAATCACAGCATGGTTTGAATTATACTCAGCAGCCTATAAGGT 493
Query 449 CCGA-TTACTCCAGAA-GTGTATTGCGAGAACACCAGCAATC-CACAACTGGTTACATGC 505
|||| || ||| |||| || |||||| ||||||||||||| | | ||| |||||||| ||
Sbjct 494 CCGAGTT-CTCGAGAAGGT-TATTGCAAGAACACCAGCAA-CTCTCAAATGGTTACACGC 550
Query 506 ATGGAAACCTTATGTTGCAGGC-ATCTCCAAATGAGGG-AAGTTTTGTGGGAGTGGATGT 563
|||| |||||| ||||||| | || || |||| ||| || |||| ||||||| ||||
Sbjct 551 ATGGCAACCTTGGGTTGCAGACAAT-GCCGAATG-GGGCAAATTTTTTGGGAGTTAATGT 608
Query 564 AGAATCTAGTAGGGATAGGTTATCAGGGAGTGGATTCACTCTAGACCGTCATAAAACTCC 623
|||||||||||||||||| ||||||| || ||||| |||| ||| | |||||||| |||
Sbjct 609 AGAATCTAGTAGGGATAGATTATCAGCAAGGGGATTTACTCCAGAACTTCATAAAATTCC 668
Query 624 TATGAGGTTTGATATGGGAGAATCTCCGGTTAACTATGATTTCTTTGGTGGTCAACAACA 683
|||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 669 TATGAGCCTTGAGATGGGAGAATCTCCAGTTAATTATGATTTCTTTGGTGGTCAACAACA 728
Query 684 ATTAAACA-ATCAGCTCCCTGGCATGATCCAACCTTTTCCAAGGCAGCAGATGACATTCA 742
|| ||| | | ||| |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 729 ATCAAATACA-CAGTTCCCTGGCATGATCCAGCCTTTGCCAAGGCAGCAGATGACATTCA 787
Query 743 ATGATATGCAACTACTAAAGCAACACGCTATGGCTAAGCAAATGCATGAATATCAAATTC 802
|||||||||||||||| ||||| || | ||||| |||||||||||||||||||||||| |
Sbjct 788 ATGATATGCAACTACTGAAGCAGCAAGTTATGGTTAAGCAAATGCATGAATATCAAATGC 847
Query 803 AACAACAACTTCAAAAGCAACAGCTAGAAGCCAGGCAGCTCAATTCTTTGCAT-TCAAAC 861
||||||||||||||| ||||||||||| ||||||||| ||||||||||| || | |||
Sbjct 848 AACAACAACTTCAAAGGCAACAGCTAGGGGCCAGGCAGGTCAATTCTTTGAATAT-AAAT 906
Query 862 GCAGTCAATGGAAGTCTCTCAAGTGATAACCAATCACATCCTTCGATTAGTGGTGTCCCT 921
|||||||||||||||| |||||||||||||||||||||| | ||| | ||| |||||
Sbjct 907 GCAGTCAATGGAAGTCGCTCAAGTGATAACCAATCACAT--AT-GATCAATGGCATCCCT 963
Query 922 CTACAGGATGCGTCTAATAATTGGTTGCAACCAGATCTTATGACAGGAAATACAAACTGG 981
|| || |||||||||| ||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 964 CTTCAAGATGCGTCTAGTAACTGGTTGCAGCCAGATCTCATGACAGGAAATACAAACTGG 1023
Query 982 ATGCATCGCGGCATCTCGCCAATTGTTCAAAGTTCATCCAGTGGGCTCGTGATTACCCCT 1041
||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 1024 ATGCATCGCGGCATCTCGCCAGTTGTTCAAGGTTCATCCAGTGGGCTCATGATTACCCCT 1083
Query 1042 GAGCATGGACA-TGCAAACTTAATGGCACAACAATTTGAAACTTCCTTGTACGGTATGCC 1100
|||||||| || | ||||||||||||| |||||||||| | |||||||||||||||||||
Sbjct 1084 GAGCATGGGCAGT-CAAACTTAATGGCTCAACAATTTGGACCTTCCTTGTACGGTATGCC 1142
Query 1101 TGTTGGTGGGACAGATGCTCCTCAAAATGCCTTTTCTTCCTTTCAGATGAAAATGTTAGC 1160
|||| |||||||| |||| |||||||||| ||||||||| |||||||||| | ||||||
Sbjct 1143 TGTTAGTGGGACAAATGCAGCTCAAAATGCTTTTTCTTCCGTTCAGATGAACAGGTTAGC 1202
Query 1161 TGCACAGCATGGTTCTGCAAACATGAGTTCCTCTCTCACTAATCAGCCAACATCATTTCT 1220
||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||
Sbjct 1203 TGCACCGCATGGTTCTGCAAACAGGAGTTACTCTCTCACTAATCAGCCAACGTCATTTCT 1262
Query 1221 GAATCAAAGTG----ACAG--T---CATATGCTCCCTAGATCCACATACCAGGAGAAT-C 1270
|||||| ||| |||| | || |||||||||||||||||||||||||| || |
Sbjct 1263 CAATCAAGGTGGCGTACAGGATAGTCAAATGCTCCCTAGATCCACATACCAGGAAAAAGC 1322
Query 1271 -T-GTACTCCCATATATCAGTTCCAGGTTCAAATGATAGGCCTAATTTTGAAAGTTTTCA 1328
| || |||||| |||||| |||| ||||||| ||||||| | |||||||| ||| ||
Sbjct 1323 GTTGTTCTCCCAGGCATCAGTGCCAGATTCAAATAATAGGCCCACTTTTGAAAATTTCCA 1382
Query 1329 GCAAGATAATTCTGGTCAGCAG-AATATTTCAGGGCAGGAAGAA-TTTGGTCAGATGGAT 1386
||||||| |||| || || || || ||||||| |||||| ||| ||| |||||||| |
Sbjct 1383 GCAAGATGATTCCCGTGAG-AGGAACATTTCAGCGCAGGA-GAAATTTTGTCAGATGAA- 1439
Query 1387 GG-TTCTGGTCTATCTGAAAAA-TCATTTATGAAAGTGCCTGAAAATATAAATACATTGC 1444
|| |||||||| ||| |||||| | |||||||||||||||||||||||||||| ||||||
Sbjct 1440 GGATTCTGGTCCATCAGAAAAAAT-ATTTATGAAAGTGCCTGAAAATATAAATGCATTGC 1498
Query 1445 AGAAGTCGACAACATTAGATCCAACAGAGGAAAAGATTTTGTTTGGTTCGGATGACAATT 1504
|||||||| |||||||||||||||| || |||||||| ||||||||||| ||||||||||
Sbjct 1499 AGAAGTCGTCAACATTAGATCCAACTGAAGAAAAGATCTTGTTTGGTTCTGATGACAATT 1558
Query 1505 TGTGGGAGGCATTTGGAAACAGTACTGATATGAGCTTGACA-GGAAATCTTATGTCCAGT 1563
||||||| |||||||||| ||| ||||||||||||||| || ||||||||||| ||||||
Sbjct 1559 TGTGGGATGCATTTGGAAGCAGCACTGATATGAGCTTG-CAAGGAAATCTTATTTCCAGT 1617
Query 1564 AGTTCTGACCTTTTTGATGCATGCCCCTCTTTGCAAAGTGGGAGTTGGAGTGCTCTTATG 1623
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1618 AGTTCTGACCCATTTGATGCATGCCCCTCTTTGCAAAGTGGGAGTTGGAGTGCCCTTATG 1677
Query 1624 CAATCTGCTGTAGCAGAAACAGCCAGTGATGACGCAGGTGTACATGAATGGG 1675
||||||||||||||||||||| |||| || || |||| |||||||| |||||
Sbjct 1678 CAATCTGCTGTAGCAGAAACATCCAGCGAAGATGCAGTTGTACATGGATGGG 1729
Score = 970 bits (525), Expect = 0.0
Identities = 742/844 (88%), Gaps = 26/844 (3%)
Strand=Plus/Plus
Query 2699 ATATGCAGCAAATATCAGGCTCCACACCAGGAGTGGAGACTCTCTCATCTGCCTCATTGC 2758
||||||||||||| ||||||| | |||||||||| ||||||| |||||| | ||||||
Sbjct 4016 ATATGCAGCAAATGTCAGGCTTCGCACCAGGAGTTGAGACTCCCTCATCCGAGTCATTG- 4074
Query 2759 CTT-GTGGTGCTACTGACCAA-CTTCTAAAGGTTTATAAACCAAAGAAGCGCAAAAAC-G 2815
||| |||||||||||| ||| ||| | |||||| ||||||||||||||||| ||||| |
Sbjct 4075 CTTCATGGTGCTACTGA-CAAGCTTTTGAAGGTTGATAAACCAAAGAAGCGC-AAAACTG 4132
Query 2816 TCACATCAGAACTTTTATCTTGGAGTAAAGAAGTTATGCAACG-TCCCCAGAGGCTTAAG 2874
||||||||||||| |||||||| ||||||||| | || | | | ||||||||||||||
Sbjct 4133 CCACATCAGAACTTCAATCTTGGAATAAAGAAGTCACGC-AGGATTCCCAGAGGCTTAAG 4191
Query 2875 ACTCTCGGTGAGGCCGAGGTTGATTGGGCCAGAGCAACTAATCGATTTGCTGAAAAAGTG 2934
|| ||| | ||||| ||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 4192 ACGCTCAGCGAGGCAGAGATTAATTGGGCCAGAGCAACTAATCGATTTGCTGAAAAAGTG 4251
Query 2935 GAATTTGCGACTTTACTTGAGGATGGCCCACCAATCAGATCAAAGAGAAGGCTTATATAT 2994
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 4252 GAATTTGAGACTTTACTGGAGGATGGCCCACCAATCAGATCAAAGAGAAGGCTTATACAT 4311
Query 2995 ACAACACAACTCATGCAACAACTGTTTCGTCC-CCTTCCTGGTAGGG-TGAA-ATCTTTA 3051
||| ||||||||||||| ||||| ||| | || ||| || | |||| | || |||||||
Sbjct 4312 ACATCACAACTCATGCAGCAACTATTTAGCCCGCCT-CCAGC-AGGGGT-AATATCTTTA 4368
Query 3052 GTT---A-CT-AG-CTATGAGTTTGTGGCATATTCTGCTGCTAGAGCTGCGCTAGGAGAT 3105
| | | || | |||||||||||| |||||| ||||||| |||| ||| |||||||||
Sbjct 4369 GCTGCGAGCTCAAACTATGAGTTTGTTGCATATACTGCTGCAAGAGGTGCACTAGGAGAT 4428
Query 3106 GCATGTAGCTCCACTTCTACT-GACAGGATTGAGGGCTTTTTGCTTC-AGAACAATTTAA 3163
||||||||||||| || || | ||||||| |||| ||||||||| | | ||||||| ||
Sbjct 4429 GCATGTAGCTCCAGTTGTA-TAGACAGGAGTGAGCGCTTTTTGCCCCCA-AACAATTCAA 4486
Query 3164 ACCCGTTGTCTGAGAGAACGGAAACTGAAAAAATGAGTGACCAATACATCTCCAAAGCAG 3223
||||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct 4487 ACCCGTTGTCTGAGACAACGAAAACTGAAAAAATCAGTGACCAGTACATCTCCAAAGCAG 4546
Query 3224 CTGAAGATTTCATTAGTAGAACAAAGAAACTAGAGACTGACTTTGCAGGACTAGAAAAAG 3283
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
Sbjct 4547 CTGAAGATTTCATTAGTAGAACACAGAAACTAGAGACTGACTTTGCAGGGCTAGAAAATG 4606
Query 3284 GAACTACAATTACAGACTTGAGAGTCGAAGTCCAGGATCTAGAGAGGTTTGCAGTGATCA 3343
||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |
Sbjct 4607 GAACTACAATTCCAGACTTGAGAGTTGAAGTCCAGGATCTAGAGAAGTTTGCAGTGATAA 4666
Query 3344 ATCGTTTTGC-AAGTTTCCACCAATCGTCCTCATCTATGGACCGGTCCGTGAGTTCACTT 3402
|||||||||| ||||| ||||| | | || ||||||||||||||| |||||| |||||||
Sbjct 4667 ATCGTTTTGCGAAGTT-CCACCCACCATCTTCATCTATGGACCGGACCGTGAATTCACTT 4725
Query 3403 AGGTTAAACCCACAGAGATATGTTACCGTAGCTCCAGTGCCTCGGCATATTCCAGATAGG 3462
|||||||||||||| ||||||||||||||||||||| |||||| | |||||||||| |||
Sbjct 4726 AGGTTAAACCCACAAAGATATGTTACCGTAGCTCCAATGCCTCAGAATATTCCAGACAGG 4785
Query 3463 GTACAATGTCTCTCTTTCTAACTATTGATAGATCCATATAATTAACTTTTTGGCCAATCC 3522
||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 4786 GTACAATGTCTCTCTCTCTAACTATTGATGGATCCATATAATTCACTTTTTGGCCAATCT 4845
Query 3523 TCCC 3526
||||
Sbjct 4846 TCCC 4849
Score = 313 bits (169), Expect = 7e-84
Identities = 360/448 (80%), Gaps = 29/448 (6%)
Strand=Plus/Plus
Query 1770 TGATTCAACCCGTTCAACTGTTCAACATTTGCAAGACAAAGGAAAT-ATTGTTTCAGATC 1828
|||||| || || || ||||||| ||||||| ||||| |||||| | | |||||||||
Sbjct 1827 TGATTCCACTCGGGCAGCTGTTCAGCATTTGCCTGACAAGGGAAATAAAT-TTTCAGATC 1885
Query 1829 ATGGCCTGTTGGAGAAGCCAATGACTCCGCAGAGTCAAATGGCTGGAAATATGTTTCAAT 1888
||||||||||||||||||| ||| ||| | |||||||||||||| ||||| || || |
Sbjct 1886 ATGGCCTGTTGGAGAAGCCGATGGCTCAACTTAGTCAAATGGCTGGTAATATATTCCATT 1945
Query 1889 CTTTAAGTTCTGGTATTGATGTGCAGAATAAT-TCGTGTTCTATTG-GAAAGAATGAGGA 1946
||| |||| ||||||| ||||||||| | ||||||||| | || |||||||||
Sbjct 1946 CTTCAAGT------ATTGATGAACAGAATAATAT-GTGTTCTAT-GCGACAGAATGAGGG 1997
Query 1947 CATTGATGATAGACTTGGTAACTGGAGGGGTGCTTCCAATCCAAAC-TCAGCTGCTCTGA 2005
|||||| |||||| |||||| |||| || |||||| |||||||| | |||||||||||
Sbjct 1998 CATTGAAGATAGATTTGGTATTTGGAAGGCTGCTTCTAATCCAAATGT-AGCTGCTCTGA 2056
Query 2006 TGGAACGGAAGAATCATTTTACTCAAAATCTACAAATG-CAA---A-GG----G-CAA-G 2054
| |||| |||||||||||| || ||||||| ||||| | ||| | || | || |
Sbjct 2057 TTGAACAGAAGAATCATTTCACACAAAATCCACAAAGGGCAAGCTATGGATTTGGCATTG 2116
Query 2055 CTATGGTGCAGGAGATGATTCTAGAGCTTCGAGGGATATCCAG-CAAAATATCCAACATC 2113
||| | ||||| | | |||||||| ||||| |||||| ||||| | | || |||||| |
Sbjct 2117 CTA-G-TGCAGAAAACGATTCTAGTGCTTCTAGGGATGTCCAGGCCAG-TAGCCAACAAC 2173
Query 2114 ATTTGGATAATAACTCTGTGGAGAAAGCTATTCATCAACTGAATTCTGGGGACAGCAGTC 2173
||||||||||||||||||||||||| ||||| | ||||||||| ||| | || ||||||
Sbjct 2174 ATTTGGATAATAACTCTGTGGAGAAGGCTATCCCTCAACTGAAATCTAGAGATGGCAGTC 2233
Query 2174 AGATTCTTGAGTCATATGCGAGTAATAA 2201
||||||||||||||||||| ||||||||
Sbjct 2234 AGATTCTTGAGTCATATGCAAGTAATAA 2261
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141345826122
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5