BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G08600.2 Length=2821 Score E Sequences producing significant alignments: (Bits) Value Ahg350126 jgi|Araly1|350126|fgenesh1_pg.C_scaffold_6000719 1984 0.0 Ahg490329 jgi|Araly1|490329|fgenesh2_kg.6__3463__AT4G02400.1 1360 0.0 > Ahg350126 jgi|Araly1|350126|fgenesh1_pg.C_scaffold_6000719 Length=2325 Score = 1984 bits (1074), Expect = 0.0 Identities = 1279/1375 (93%), Gaps = 26/1375 (2%) Strand=Plus/Plus Query 463 gatgatgatgatgatAGGCACTCACGAATGTTGAAAAATGTCACTGAATTGCCAATTTCA 522 ||||||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||| || Sbjct 289 GATGATGATGAAGATAGGCACACACGGATGTTGAAAGATGTCACTGGATTGCCAATTGCA 348 Query 523 GCCTTTCAAGGAGAGAGTAAGAACAAACGTGTAGTCTTTACTGAACCATATCCAGAGTCT 582 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 349 GCCTTTCAAGGAGAGAGTAAGAGCAAACGTGTAGTCTTCACTGAACCATATCCAGAGTCT 408 Query 583 GAATTCAATCCTACCCGTGATGTTCTGGAGGGTAAATCCCTCACCACAATTGATGACTTT 642 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 409 GAATTCAATCCTACCCGTGATGTTCTGGAGGGTAAATCCCTCACCACAATTGATGACCTT 468 Query 643 ATGGAGCCTCTTCAAGGATTACATGGAAATAGCCAACTAAGCAATATGATCTCCCGGATG 702 |||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||| Sbjct 469 ATGGAGCCTCTTCAAGGATTACCTGGATATAGCAAACTAAGCAATATGATCTTCCGGATG 528 Query 703 CGAAAAGATACGCAGTCTCTTGTTCATGCTCCTCTGCCAAAGCCAGAACAAGAAAGACTG 762 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 529 CGAAAAGATACGCAGTCTCTTGTTCATGCTCCTCTGCCAAAGCAAGAACGAGAAAGACTG 588 Query 763 GAACGGGATGTAGCGAATGAACTGGTTTACAAGGGGTTTGATATTTGGGTGCCTCTGGTA 822 |||||| |||||| ||| ||||| ||| |||||| |||| ||| |||||||||||||||| Sbjct 589 GAACGGAATGTAGTGAAAGAACTAGTTGACAAGGTGTTTAATAATTGGGTGCCTCTGGTA 648 Query 823 AAAAGGAACAGAGAGGCACCAACTATTTACTTTAACCAAGATGTCAATGTTGGATACTCT 882 || ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 649 AAGAGGAATAGGGAGGCACCAACTGTTTACTTTAACCAAGATGTCAATGTTGGATACTCT 708 Query 883 ACCGTTGGTGCTATAGCATCACAATTTCATCCCAGGACTGAATTTGAGATGAAAATGGCT 942 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 709 ACCGTTGGTGCTATAGCATCACAATTTCAGCCCAGGACTGGATTTGAGATGAAAATGGCG 768 Query 943 TCTCTACTCGATGATCATGAGATTTTGGAGGCTCACAAAGAAGATGGAGCTAGGCTTCTT 1002 ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| Sbjct 769 TCTCTACTCGATGATAATGACATTTGGGAGGCTCACAAAGAAGATGGAGCTAGGCTTCTT 828 Query 1003 GAATTCAAC---G--AG----GTATCTATGGAAGATCACATCAAGAGACGTAACCATGTT 1053 ||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct 829 GAATTCAACGAGGCAAGTTTTGTATCTATGGAAGATCACATCAAGAGACGTAACCATGTT 888 Query 1054 GCTAAGATGCGGAGCATGCTCTTCCGAGTTGACCTGAAACA-TAAACGAATCAAGCAGAT 1112 || |||||||| |||||||| |||||||||||||||||| | ||||||||||||| |||| Sbjct 889 GCGAAGATGCGTAGCATGCTGTTCCGAGTTGACCTGAAA-AGTAAACGAATCAAGAAGAT 947 Query 1113 TAAGTCTAAAACATATCATCGCCTTAAAAACAAAGACCTGAATCAATCGGGTGTTGGAGC 1172 |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 948 TAAGTCTAAAACTTATCATCGCCTTAAAAACAAAGACCTGAATAAATCGGGAGTTGGAGC 1007 Query 1173 ATTCATGGAGCCAGCAATGGCTAAAGAAGAGGCTAAGAAGCAGGAGGCGAGGCGAGTAAA 1232 ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct 1008 ATTCATGGACCCAGCAATGGCTAAAGAAGAGGCTAAGAAGCAGGAGGCTAGACGAGTTAA 1067 Query 1233 GGAACGTATGACTTTAAAGCACAAAAACACAGGACAATGGGCCAAACGCATGCTAAGCCG 1292 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 1068 GGAACGTATGACTTTAAAGCACAAAAACACAGGACCATGGGCCAAACGCATGCTAAGGCT 1127 Query 1293 TGGACTGAATAGGAAATACGATGTG-ACTCAGGCAGCTCTATCTAAACAACTTCAAATTC 1351 ||||||||||||||||||||||| | |||||||||||| ||||| |||||||||| ||| Sbjct 1128 TGGACTGAATAGGAAATACGATG-GAACTCAGGCAGCTATATCTGAACAACTTCAGATTA 1186 Query 1352 ATGCTACTTTGTCCAGAAAGATGAACTCCACAAAAGATGAAAGTAGTAGTGATGAGGAAG 1411 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1187 ATGCTACATTGTCCAGAAAGATGAACTCCACAAAAGATGAAAGTAGTAGTGACGAGGAAG 1246 Query 1412 ATTTGAATGATGGTTCAGATCAGGATACTTCTAAACTGATAGCGGAAGCAAAGGAGAAGA 1471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1247 ATTTGAATGATGGTTCAGATCAGGATACTTCTAAACTGATAGCGGAAGCAAAGGAGAAGA 1306 Query 1472 TACTGAAAACTGTGGACGATGATGAAGTCCCCATTTCTCGTCTTATGTCATTACCTTTCA 1531 |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1307 CACTGAAAACTTTGGAAGATGATGAAGTCCCCATTTCTGGTCTTATGTCATTACCTTTCA 1366 Query 1532 TGGCTCGTGCTGTGAAAAAGAAAAACGAGGAAGCTAAAGAAGAAGGTAAACGTG-ATATT 1590 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | || Sbjct 1367 TGGCTCGTGCTGTGAAAAAGAAAAACGAGGAAGCTAAAGAAGAAGATAAACGTGGAC-TT 1425 Query 1591 GAGGAGT-TG--GAG---AA-AT-T-TGGTGGAGCAGAAACCTCTAAAAAGTCCACTAAT 1641 ||||||| | ||| || | | |||||||||||||||||||||||||||||||||| Sbjct 1426 GAGGAGTATAAAGAGTTGAAGAACTCTGGTGGAGCAGAAACCTCTAAAAAGTCCACTAAT 1485 Query 1642 GTTGTTGGTAGAAGAGTATTTGGTGCAGAAGCTCCAAAAGAGTCTGAAAAGGAATCAGAC 1701 |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 1486 GTTGGTGGTAGAAGAGTATTTGGGGCAGAAGCTCCAAAAGAGTCTAAAAAGGAATCAGAC 1545 Query 1702 AACCTTTTTGATAACAGTGATAGTAGTGACAATGATATGGAAGATAATGAGTTAGAGGCT 1761 ||| ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1546 AACTTTTTTGATAGCAGTGATAGTAGTGACAATGATATGGATGATAATGACTTAGAGGCT 1605 Query 1762 GTAAAAGATAATGCTTCACCTGCTAGAAACACTGAAA-CCATTATGGAAGCCGAG 1815 ||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||| Sbjct 1606 GTAAAAGATAATGCTTCACCTGCTAGAAAAACT-AAAGCCATTATGGAAACCGAG 1659 Score = 880 bits (476), Expect = 0.0 Identities = 572/616 (93%), Gaps = 16/616 (3%) Strand=Plus/Plus Query 2004 AGAAAGTG---ATGATTCAGAGAGTGAAGCAGAGCAAATGGTTGATGGGATTTTGACATG 2060 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1689 AGAAAGTGATTATGATTCAGAGAGTGAAGCAGAGCAAATGGTTGATGGGATTTTGACATG 1748 Query 2061 CGGTTCAAAGGAAACGTATGAAATTCCTTGTCAAGCAGAGCTTGTAAGCCGTGCTTTTGC 2120 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1749 TTGTTCAAAGGAAACCTATGAAATTCCTTGTCAGGCAGAGCTTGTAAGCCGTGCTTTTGC 1808 Query 2121 TGGTGATGACGTTGAAGGTGACTTTGAGAAGGATAAGCAAGAGGTACTAAATCAGGAAGT 2180 |||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1809 TGGTGATGACGTTGTAGGTGAATTTGACAAGGATAAGCAAGAGGTACTAAATCAGGAAGT 1868 Query 2181 TCCTGAACCCGAGAAACCGGTTCAAGTTGCTGGTTGGGGACATTGGACCAATAACCAAAA 2240 |||||||||||| ||||| ||||||||| ||||||||||||| |||||||||| |||||| Sbjct 1869 TCCTGAACCCGAAAAACCAGTTCAAGTTCCTGGTTGGGGACAATGGACCAATACCCAAAA 1928 Query 2241 CAAGAGAGGTTTACCATCAAGGATTGTTAGAGAACACGAAGAAGCCAAGAAAACGAGAGA 2300 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1929 CAAGAGAGGTTTACCATCAAGGATGGTTAGAGAACACGAAGATGCCAAGAAAACGAGAGA 1988 Query 2301 GCAAGCTCTCAGAAAAAGGAAAGACGCTTCTTTCAAACATGTTATCATATCAGAAAAAGT 2360 ||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct 1989 GCAAGCTCTCAAAAAAAGGAAAGACGCTTCTCTCAGACATGTTATCCTATCAGAAAAAGT 2048 Query 2361 TGATAAAAAGGCTGAGAAACTTCAGACAAAGAGTCTACCTTACCCTTACACATCAAAGGA 2420 ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 2049 CGATAAAAAGGCTGAGAAACTTCATACAACGAGTCTACCTTACCCTTACACATCAAAGGA 2108 Query 2421 AGTTTTCGAACAAAGTATGCGTATGCCTATAGGACCTGAGTTTAATCCCACAACTATTGT 2480 |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2109 AGTTTTTGAACATAGTATGCGTATGCCTATTGGACCTGAGTTTAATCCCACAACTATTGT 2168 Query 2481 TGGAGTTCTAAACCGACCTGAGGTTGTGAAGAAAGCTGGAGTGATCATTAAACCTGTCAA 2540 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2169 TGGAGATCTAAACCGACCTGAGGTTGTGAAGAAAGCTGGAATGATCATTAAACCTGTCAA 2228 Query 2541 GTTTGAGGAAGTAAATCCGAA--------T-GA---CGAACACCCTCGTAGCCATCAGAA 2588 ||||||||||||| ||||||| | || ||||||| |||||||||||||||| Sbjct 2229 GTTTGAGGAAGTAGATCCGAAGGAGAAAGTAGAGGACGAACACGCTCGTAGCCATCAGAA 2288 Query 2589 ACAAAAACCCAAGAAA 2604 |||||||||||| ||| Sbjct 2289 ACAAAAACCCAA-AAA 2303 Score = 353 bits (191), Expect = 3e-96 Identities = 249/276 (90%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 118 GGAGGAGAGAAGAGGAAATCTAGTTTCAAAAACCTAGCTAATGCAAAGAAGAGGAGAACA 177 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 4 GGAGGAGAGAAGAGGAAACCTAGTTTCAAAAACCTAGCTAATGCAAAGAAGAGGA-AA-- 60 Query 178 GGACCTCACTTACCTAGCTCAATACTCAAGACCATTGCGAATGAGAAACGTCCTTTGAAC 237 |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 61 GGACCTCACTTACCCAGCTCAATACTCAAGACCATTGCCAATGAGAAACGCCCTTTGAAC 120 Query 238 TCTGACGAAGGAGACGATGAGATTGATTCTGCTTACGGTGAT--TTT-TACGAGTACGAA 294 ||||||||||||||||||||||| ||||| | |||||||||| ||| |||||||||||| Sbjct 121 TCTGACGAAGGAGACGATGAGATCGATTCCGATTACGGTGATGATTTGTACGAGTACGAA 180 Query 295 GAAGGTGTGCCTGAAGAGGAATCTAGGAAAAACAACCGCTACGAACGCGTCGTTAACTAC 354 ||||||||| ||||||||||||| ||||||||||| |||||||| ||||| | |||||| Sbjct 181 GAAGGTGTGGCTGAAGAGGAATCCAGGAAAAACAAACGCTACGACCGCGTGGATAACTAT 240 Query 355 GAATTCGAGCTTGCAGAGGATTGCGAGGTT-AAAAC 389 ||||| |||||| | ||||||| |||| | ||||| Sbjct 241 GAATTTGAGCTTCCCGAGGATTTTGAGGATGAAAAC 276 > Ahg490329 jgi|Araly1|490329|fgenesh2_kg.6__3463__AT4G02400.1 Length=2720 Score = 1360 bits (736), Expect = 0.0 Identities = 1335/1610 (83%), Gaps = 98/1610 (6%) Strand=Plus/Plus Query 1021 ATGGAAGATCACATCAAGAGA-CGTAACCATGTTGCTAAGATGCGGAGCATGCTCTTCCG 1079 |||||||| ||||||||| | ||| |||| |||| |||||||||||| |||||||||| Sbjct 949 ATGGAAGACCACATCAAG-TACCGTGACCACATTGCCAAGATGCGGAGCCTGCTCTTCCG 1007 Query 1080 AGTTGACCTGAAACA-TAAACGAATCAAGCAGATTAAGTCTAAAACATATCATCGCCTTA 1138 ||| |||||| | |||||| |||||| |||||||||||||||| ||||||||||||| Sbjct 1008 CCATGAACTGAAA-AGTAAACGTATCAAGAAGATTAAGTCTAAAACTTATCATCGCCTTA 1066 Query 1139 AAAACAAAGACCTGAATCAATCGGGTGTTGGAGCATTCATGGAGCCAGCAATGGCTAAAG 1198 || |||||||||||| |||||| | |||||||| ||||| |||| ||||||||||| Sbjct 1067 AAGGCAAAGACCTGAAGAAATCGGCCATGGGAGCATTTATGGACCCAGAAATGGCTAAAG 1126 Query 1199 AAGAGGCTAAGAAGCAGGAGGCGAGGCGAGTAAAGGAACGTATGACTTTAAAGCACAAAA 1258 ||||||||| ||||||||| | || |||||| ||||||| ||||| || |||||||||| Sbjct 1127 AAGAGGCTATTAAGCAGGAGACTAGACGAGTAGAGGAACGGATGACGTTGAAGCACAAAA 1186 Query 1259 ACACAGGACAATGGGCCAAACGCATGCTAAGCCGTGGACTGAATAG-GAAATACGATGTG 1317 |||| ||| ||||||||||||||||| ||||||||||||||||| | || ||| |||| | Sbjct 1187 ACACCGGAAAATGGGCCAAACGCATGTTAAGCCGTGGACTGAAT-GAGAGATATGATG-G 1244 Query 1318 -ACTCAGGCAGCTCTATCTAAACAACTTCAAATTCATGCTACTTTGTCCAGAAAGATGAA 1376 |||| ||||||| ||||| |||||||||| ||| |||| |||||||| ||||||||||| Sbjct 1245 AACTCGGGCAGCTATATCTGAACAACTTCAGATTAATGCCACTTTGTCAAGAAAGATGAA 1304 Query 1377 CTCCACAAAAGATGAAAGTAGTAGTGAT--GAG-GAAGAT-TTG-A-A--TGA----TGG 1424 |||||| || |||| |||||| |||||| ||| || ||| | | | ||| ||| Sbjct 1305 CTCCACGAACGATGGAAGTAGCAGTGATGAGAGCGACGATGAGGAAGAGTTGAGTTGTGG 1364 Query 1425 TTCAGATCAGGATA---CTTCTAAACTGATAGCGGAAGCAAAGGAGAAGATACTGAAAAC 1481 |||||||| ||||| |||||||| ||||||| |||| | |||||||| ||||||||| Sbjct 1365 TTCAGATCTGGATACTCCTTCTAAATTGATAGCAAAAGCCAGGGAGAAGACACTGAAAAC 1424 Query 1482 TGTGGACGATGATGAAGTCCCCATTTCTCGTCTTATGTCATTACCTTTCATGGCTCGTGC 1541 |||||| ||||||||||| |||| |||| ||||| | ||||||||||||||||||||||| Sbjct 1425 TGTGGAAGATGATGAAGTACCCAATTCTGGTCTTCTTTCATTACCTTTCATGGCTCGTGC 1484 Query 1542 TGTGAAAAAGAAAAACGAGGAAGCTAAAGAAGAAGGTAAACGTG-ATATTGAGGAGT-TG 1599 | ||||||||||||||||||||| ||| ||||||| |||||||| || ||||||||| || Sbjct 1485 TATGAAAAAGAAAAACGAGGAAGTTAATGAAGAAGCTAAACGTGCAT-TTGAGGAGTATG 1543 Query 1600 --GA----GA-AATT-TGGTGGAGCAG-AAACCTCTA-AAAAGTCCACTAATGTT-GTTG 1648 || || |||| ||||||||||| ||| | ||| |||| ||| || ||||| | || Sbjct 1544 AAGAGTTGGAGAATTCTGGTGGAGCAGAAAATC-CTAGAAAA-TCCGCTGATGTTAG-TG 1600 Query 1649 GTAGAAGAGTATTTGGTG------C---A---GAAGCTCCAAAAGAGTCTGAAAAGGAAT 1696 |||||||||||||||||| | | |||||||||||||||||| ||||||| | Sbjct 1601 GTAGAAGAGTATTTGGTGCCACCTCTAAAGTCGAAGCTCCAAAAGAGTCTAAAAAGGACT 1660 Query 1697 CAGACAACCTTTT-TGATAACAGTGATAGTAGTGACAATGATAT----GG-A-AG---AT 1746 | ||||| ||||| ||| ||||||| | |||||| |||||||| || | || || Sbjct 1661 CGGACAA-CTTTTATGACAACAGTG--A-TAGTGAAAATGATATGGAAGGCATAGAAAAT 1716 Query 1747 AATGA-GTTAGAGGCTGTAAAAGATAATGCTTCACCTGCTAGAAACACTGAAACCATTAT 1805 ||||| || | || | | ||||| ||||||||||||||||||||||| | |||| | Sbjct 1717 AATGACCTT-GTGGGTATTGGAGATACTGCTTCACCTGCTAGAAACACTGGAGCCATAAC 1775 Query 1806 GGAAGCCGAGAAGTTGGATGAT-ATTGCTGGAAACCCAGCATCTAAGACAACATTTGATG 1864 || || |||||| | |||||| | || || ||| ||||| ||||||||||||||||||| Sbjct 1776 AGAGGCTGAGAAGCTCGATGATGA-TGTTGAAAATCCAGCTTCTAAGACAACATTTGATG 1834 Query 1865 TCGCCTTATATGCATCAGGCTCCTGGAAGAAGATGACAGGCTGCAAAAACGCAGAATCCA 1924 | ||||||| ||| |||||||| ||||||||||||| ||||||| |||| |||||||||| Sbjct 1835 TTGCCTTATTTGCGTCAGGCTCTTGGAAGAAGATGAAAGGCTGCCAAAATGCAGAATCCA 1894 Query 1925 AAAAAGCTTCAAAGACGCATGTGCCCATTTCGCAGTCCCAAGATAAAAAGGAATCGAGTG 1984 ||||| || ||||||| ||| || ||||| || |||||||||||||||||| | Sbjct 1895 AAAAACCTCCAAAGACACATAAACCAATTTCAAAGGGCCAAGATAAAAAGGAATC----G 1950 Query 1985 ATTCAGAAAGTGATGATTCAGAAAGTGATGATTCAGAGAGTGAAGCAGAGCAAATGGTTG 2044 || | ||||| ||||||||| ||||| ||||||||||||||||||||||||| Sbjct 1951 ----AG--A--GATGA---AGAAAGTGAAGATTCCGAGAGTGAAGCAGAGCAAATGGTTG 1999 Query 2045 ATGGGATTTTGACATGCGG-TTCAAAGGAAACGTATGAAATTCCTTGTCAAGCAGAGCTT 2103 ||||||||||||||| | | |||||||||||| ||||||||||||| ||||||||||||| Sbjct 2000 ATGGGATTTTGACAT-CTGCTTCAAAGGAAACCTATGAAATTCCTTCTCAAGCAGAGCTT 2058 Query 2104 GTA-AGCCGTGCTTTTGCTGGTGATGACGTTGAAGGTGACTTTGAGAAGGATAAGCAAGA 2162 || | | |||||||||||||||||||||||| | ||| |||||||||||||| ||||| Sbjct 2059 ATACAAC-GTGCTTTTGCTGGTGATGACGTTGTTGATGAATTTGAGAAGGATAAACAAGA 2117 Query 2163 GGTACTAAATCAGGAAGTTCCTGAACCCGAGAAACCGGTTCAAGTTGCTGGTTGGGGACA 2222 ||| ||||||||||||||||||||||| || ||||| |||| |||| ||||||||||||| Sbjct 2118 GGTTCTAAATCAGGAAGTTCCTGAACCGGAAAAACCAGTTCTAGTTCCTGGTTGGGGACA 2177 Query 2223 TTGGACCAATAACCAAA-ACAAGAGAGGTTTACCATCAAGGATTGTTAGAGAACACGAAG 2281 |||||||||| ||||| | |||||||||||||| ||| |||| ||||||||||| |||| Sbjct 2178 ATGGACCAATATCCAAAGA-AAGAGAGGTTTACCTTCATGGATGGTTAGAGAACATGAAG 2236 Query 2282 AAGCCAAGAAAACGAGAGAGCAAGCTCTCAGAAA-AAGGAAAGACGCTTCTT-TCA-AAC 2338 | || ||||||| |||| ||| || ||||| ||| |||||||||| | | | ||| || Sbjct 2237 ATGCAAAGAAAAAGAGAAAGCTAGATCTCA-AAACAAGGAAAGACTAT-CGTCTCAGAA- 2293 Query 2339 ATGTTATCATATCAGAAAAAGTTGATAAAAAGGCTGAGAAACTTCAGACAAAGAGTCTAC 2398 ||||||||||||||||||||| |||||||||||||| |||||||| || | || ||||| Sbjct 2294 ATGTTATCATATCAGAAAAAGCCGATAAAAAGGCTGACAAACTTCATACGACGACTCTAC 2353 Query 2399 CTTACCCTTACACATCAAAGGAAGTTTTCGAACAAAGTATGCGTATGCCTATAGGACCTG 2458 ||| ||| || ||||| ||||||||||||||||| || ||||| |||||||||||||| | Sbjct 2354 CTTTCCCATATACATCTAAGGAAGTTTTCGAACACAGCATGCGCATGCCTATAGGACCCG 2413 Query 2459 AGTTTAATCCCACAACTATTGTTGGAGTTCTAAACCGACCTGAGGTTGTGAAGAAAGCTG 2518 |||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 2414 AGTTTAATCCTGCGACTATTGTTGGAGCTCTAAACCGACCAGAGGTTGTGAAGAAAGCTG 2473 Query 2519 GAGTGATCATTAAACCTGTCAAGTTTGAGGAAGTAAATCCGAATGACGAA 2568 | ||||| |||||||| ||||| ||||||||||| ||||| || || ||| Sbjct 2474 GTGTGATAATTAAACCGGTCAAATTTGAGGAAGTGAATCCAAACGA-GAA 2522 Score = 505 bits (273), Expect = 9e-142 Identities = 474/571 (83%), Gaps = 14/571 (2%) Strand=Plus/Plus Query 452 atgatgatgatgatgatgatgatgatAGGCACTCACGAATGTTGAAAAATGTCACT-GAA 510 |||| |||| ||| | |||||||||||| ||| | || |||||| || || ||||| ||| Sbjct 329 ATGAGGATGGTGAAGGTGATGATGATAGACACACTCGTATGTTGCAAGATCTCACTGGAA 388 Query 511 TTGCCAATTTCAGCCTTTCAAGGAGAGAGTAAGAACAA-ACGTGTAGTCTTTACTGAACC 569 |||||| | ||||||||||||||||||||||| | || || |||| ||||||||||| | Sbjct 389 -TGCCAAGTGCAGCCTTTCAAGGAGAGAGTAAG-AGAAGACCTGTACTCTTTACTGAAGC 446 Query 570 ATATCCAGAGTCTGAATTCAATCCTACCCGTGATGTTCTGGAGGGTAAATCCCTCACCAC 629 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 447 GTATCCAGAGTCTGAATTCAATCCTACCCGTGATGTTCTGGAGGGTAAAGGCCTCATTTC 506 Query 630 AATTGATGAC-TTTATGGAGCCTCTTCAAGGATTACATGGAAATAGCCAACT-AAGCAAT 687 | |||| ||| ||| ||| ||||||| ||||| || ||| || | || ||| || Sbjct 507 AGTTGAGGACCTTT-TGGCGCCTCTTGAAGGAAAACCTGGGTTTAATGATCTTAAG-AAG 564 Query 688 ATGATCTCCCGGATGC-GAAAAGATACGCAGTCTCTTGTTCATGCTCCTCTGCCAAAGCC 746 | |||| |||||||| |||| ||||| |||||| ||||||||||||||||||||||||| Sbjct 565 AGGATCAACCGGATGCAGAAA-GATACTCAGTCTGTTGTTCATGCTCCTCTGCCAAAGCC 623 Query 747 AGAACAAGAAAGACTGGAACGGGATG-TAGCGAATGAACTGGTTTACAAGGGGTTTGATA 805 ||||| |||||||||||||||| | | | | ||| | ||| ||| | || | |||| ||| Sbjct 624 AGAACGAGAAAGACTGGAACGGAAAGCT-GTGAAAGGACTAGTTGAGAAAGAGTTTAATA 682 Query 806 TTTGGGTGCCTCTGGTAAAAAGGAACAGAGAGGCACCAACTATTTACTTTAACCAAGA-T 864 ||||||| |||||| || ||||| || |||||||||||| ||||||| |||||| | | Sbjct 683 AGTGGGTGCATCTGGTCAAGAGGAATAGGGAGGCACCAACTGTTTACTTCAACCAA-ACT 741 Query 865 GTCAATGTTGGATACTCTACCGTTGGTGCTATAGCATCACAATTTCATCCCAGGACTGAA 924 |||| |||||| |||||||| ||||| || ||||||||| | ||||| |||||||||||| Sbjct 742 GTCAGTGTTGGCTACTCTACAGTTGGCGCAATAGCATCAGAGTTTCAACCCAGGACTGAA 801 Query 925 TTTGAGATGAAAATGGCTTCTCTACTCGATGATCATGAGATTTTGGAGGCTCACAAAGAA 984 ||||||| ||||||||||||| ||||| ||||| | ||| || |||||||||||||||| Sbjct 802 TTTGAGAAGAAAATGGCTTCTGTACTCAATGATAACGAGCTTGGGGAGGCTCACAAAGAA 861 Query 985 GATGGAGCTAGGCTTCTTGAATTCAACGAGG 1015 ||||| |||| |||||||||||| ||||||| Sbjct 862 GATGGCGCTAAGCTTCTTGAATTGAACGAGG 892 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 106462234775 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5