BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G08680.1
Length=2027
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487710 jgi|Araly1|487710|fgenesh2_kg.6__844__AT5G08680.1 3216 0.0
Ahg487708 jgi|Araly1|487708|fgenesh2_kg.6__842__AT5G08670.1 2392 0.0
Ahg487711 jgi|Araly1|487711|fgenesh2_kg.6__845__AT5G08670.1 2385 0.0
Ahg933138 jgi|Araly1|933138|scaffold_401126.1 189 7e-47
> Ahg487710 jgi|Araly1|487710|fgenesh2_kg.6__844__AT5G08680.1
Length=2015
Score = 3216 bits (1741), Expect = 0.0
Identities = 1913/1994 (96%), Gaps = 20/1994 (1%)
Strand=Plus/Plus
Query 44 TTTCTCTGTTTCACCACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCT 103
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 29 TTTCTCTGTTT---CACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCT 85
Query 104 TCTT-CGAGTAGATCTACTTCTAAATCCTCCTTGATCGGGAGCCGAAACCCGAGGCTTTT 162
|||| || | ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 86 TCTTCCG-GCAGATCTACTTCTAAATCCTCCTTGATCGGTAGCCGAAACCCGAGGCTTTC 144
Query 163 ATCCCCCGGTCCCGCGCATGGAGCCGCTCCATGTGGGACTCTCCTTGGCCGAGTCGCCGA 222
||| || |||||||| ||| |||| || || |||||||||||||||||||||||||| ||
Sbjct 145 ATCACCAGGTCCCGCTCATCGAGCTGCGCCTTGTGGGACTCTCCTTGGCCGAGTCGCTGA 204
Query 223 GTATTCGACTTCTTCTCCGGCTAATTCGGCTGCACCATCTTCTGCTCCTGCTAAAGATGA 282
||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 205 GTATTCGACATCTTCTCCGGCTAATTCGGCTGCGCCATCGTCTGCTCCTGCTAAGGATGA 264
Query 283 GGGAAAGAAGACCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTAT 342
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 265 GGGGAAGAAGATCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTAT 324
Query 343 TGGTGCCATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATC 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 TGGTGCCATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATC 384
Query 403 TCTCGAGGTACAGGATCATCCAACAAGGTTGGTCCTTGAGGTGTCTCATCACTTGGGTCA 462
||||||||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct 385 TCTCGAGGTCCAGGATCATCCCACAAGGCTGGTACTTGAGGTGTCTCATCACTTGGGTCA 444
Query 463 AAATGTCGTTAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAGGT 522
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 445 AAATGTCGTCAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAAGT 504
Query 523 TCTCAACACTGGTGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCAT 582
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 505 TCTCAATACTGGCGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCAT 564
Query 583 GAACGTTCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACC 642
||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 565 GAATGTTCTTGGCGAACCCATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACC 624
Query 643 CATTCACAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTCGCTAC 702
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 625 CATTCACAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTGGCTAC 684
Query 703 TGGTATTAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTT 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 TGGTATTAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTT 744
Query 763 TGGCGGTGCTGGTGTTGGGAAAACAGTGCTCATTATGGAACTGATTAACAATGTTGCCAA 822
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 745 TGGCGGTGCTGGCGTTGGGAAAACAGTGCTCATTATGGAACTGATCAACAATGTTGCCAA 804
Query 823 AGCTCATGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGA 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 AGCTCATGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGA 864
Query 883 TTTGTACAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGAGAGAAACAGTCTGAGAG 942
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 865 CTTGTACAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGCGAGAAACAGTCTGAGAG 924
Query 943 CAAATGTGCCCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGG 1002
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 925 CAAATGTGCTCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGG 984
Query 1003 ACTGACTGGTTTGACTGTTGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCT 1062
||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 985 ACTGACTGGTTTGACTGTTGCCGAGTATTTCCGTGATGCCGAAGGCCAGGATGTCTTGCT 1044
Query 1063 TTTCATTGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCGTTGCTCGG 1122
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1045 TTTCATTGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGG 1104
Query 1123 TCGTATCCCGTCTGCTGTGGGGTACCAGCCAACTCTGGCTTCCGATCTTGGTGCTCTTCA 1182
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1105 TCGTATCCCGTCTGCTGTGGGTTACCAGCCAACCCTGGCTTCCGATCTTGGTGCTCTTCA 1164
Query 1183 AGAGCGAATCACAACCACCAAGAAAGGTTCAATTACCTCTGTCCAAGCCATCTATGTCCC 1242
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1165 AGAGCGAATCACTACCACCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCC 1224
Query 1243 TGCTGATGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGATGCCACAAC 1302
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1225 TGCTGATGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGACGCCACAAC 1284
Query 1303 TGTGCTTTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTC 1362
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1285 TGTGCTGTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTC 1344
Query 1363 GACGTCCCGTATGCTCTCGCCCCACATTCTAGGTGAGGAGCACTACAACACAGCTCGTGG 1422
||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||
Sbjct 1345 GACGTCCCGTATGCTCTCGCCTCACATTTTGGGTGAGGAGCACTACAACACAGCTCGTGG 1404
Query 1423 TGTGCAGAAAGTGTTGCAGAATTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAAT 1482
|||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1405 TGTGCAAAAAGTGCTACAGAACTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAAT 1464
Query 1483 GGATGAGCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATT 1542
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1465 GGATGAGTTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATT 1524
Query 1543 CTTGAGTCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGA 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525 CTTGAGTCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGA 1584
Query 1603 CCTTAAAGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTC 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1585 CCTTAAAGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTC 1644
Query 1663 CGAACAATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGAT 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1645 CGAACAATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGAT 1704
Query 1723 CGCTAAAGAGTCAGCAGCTTAGAAGCTGGATCCATCTCTTGCATATGCTTAATACCTGTC 1782
||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 1705 CGCTAAAGAGTCAGCAGCTTAGAAGCTGGATTCATCTCTTTCATATGCTTAATACTTGTC 1764
Query 1783 TGTTTCTTGTGACAATAACGAAAAGaaaaaaaCCACTGCCTGTGAGTTACCCAC----AC 1838
|||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||
Sbjct 1765 TGTTTCTTGTGACAATAACGAAAA-AAAAAA-CCACTGCCTGTGAGTTACCTACCCCCAC 1822
Query 1839 CAAGCGGAATTTGAGTTCCGTATTTATAGTTTCTTT-----CGAATTCC--TTGAGAGCT 1891
|||||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct 1823 CAAGCGGAATTTGAGTTCCGTATTTATAGTTTCTTTGGGTTCGGATTCCAATTGAGAGCT 1882
Query 1892 ACGAGATGATGCTGAACATACCCTTCATTCCCTTGTACTCAGATTTTTGGTTCATTTACT 1951
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1883 ACGAAATGATGCTGAACATATCCTTCATTCCCTTGTACTCAGATTTTTGGTTCATTTACT 1942
Query 1952 TCCTTGACTTGTTGAAATAAAGGTTAAGCAAGTCTTGCAGATTATGATTTCTTGATCTCA 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1943 TCCTTGACTTGTTGAAATAAAGGTTAAGCAAGTCTTGCAGATTATGATTTCTTGATCTCA 2002
Query 2012 G-ACTTTTTCTTTC 2024
| | ||||||||||
Sbjct 2003 GGA-TTTTTCTTTC 2015
> Ahg487708 jgi|Araly1|487708|fgenesh2_kg.6__842__AT5G08670.1
Length=1901
Score = 2392 bits (1295), Expect = 0.0
Identities = 1708/1904 (90%), Gaps = 42/1904 (2%)
Strand=Plus/Plus
Query 55 CACCACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCTTCTT-CGAGTA 113
|||| || |||||||| |||| || |||||||||||||||||||||| |||| || | |
Sbjct 16 CACC-CACTCATGGCGTCTCGGAGAGTCTTATCATCGCTTCTCCGTTCATCTTCCG-GCA 73
Query 114 GATCTACTTCTAAATCCTCCTTGATCGGGAGCCGAAACCCGAGGCTT--TTATCCCCCGG 171
||||| |||| ||| || | || | ||| ||||| |||||| || ||| |
Sbjct 74 GATCTGCTTCCAAA------TT-A--GGCAACCGTAACCCCAGGCTTCCTTCTCCTTC-- 122
Query 172 TCCCGCGCATGGA-GCCGCTCCATGT-GGGACTCTCCTTGGCCGAGTCGCCGAGTATTCG 229
||||||| | | |||||||||||| | || ||||| ||||| ||||||||||| ||
Sbjct 123 ACCCGCGCGT-CACGCCGCTCCATGTAGCTAC-CTCCTCGGCCGTGTCGCCGAGTACGCG 180
Query 230 ACTTCTTCTCCGGCTAA-TTCGGCTGCACCATCTTCTGCTCCTGCTAAAGATGAGGGAAA 288
|| ||||| ||||| || || ||||| |||||||||||||||||||| |||||||||||
Sbjct 181 ACCTCTTCACCGGC-AAGCTCAGCTGCGCCATCTTCTGCTCCTGCTAAGGATGAGGGAAA 239
Query 289 GAAGACCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTATTGGTGC 348
|||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||
Sbjct 240 GAAGACCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTTTGCCAGGTCATCGGTGC 299
Query 349 CATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATCTCTCGA 408
|||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct 300 CATTGTCGATGTGAGATTCGAGGATCAGGAAGGATTGCCTCCGATCATGACATCCCTCGA 359
Query 409 GGTACAGGATCATCCAACAAGGTTGGTCCTTGAGGTGTCTCATCACTTGGGTCAAAATGT 468
||| |||||||| || |||||| |||| |||||||||||||| || ||||||||||||||
Sbjct 360 GGTGCAGGATCACCCCACAAGGCTGGTGCTTGAGGTGTCTCACCATTTGGGTCAAAATGT 419
Query 469 CGTTAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAGGTTCTCAA 528
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 420 CGTCAGGACCATTGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAGGTTCTCAA 479
Query 529 CACTGGTGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCATGAACGT 588
|||||||||||| || ||||| ||||||||||| || || ||||||||||||||||| ||
Sbjct 480 CACTGGTGCTCCGATTACTGTACCTGTTGGAAGAGCTACTCTTGGACGTATCATGAATGT 539
Query 589 TCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACCCATTCA 648
|||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 540 TCTTGGAGAACCCATCGACGAGAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCA 599
Query 649 CAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTCGCTACTGGTAT 708
|||||| ||||| |||||||||||| | || || || |||||||| || || ||||||||
Sbjct 600 CAGAGATGCTCCGGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTAT 659
Query 709 TAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTTTGGCGG 768
||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 660 TAAGGTTGTTGATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGTGG 719
Query 769 TGCTGGTGTTGGGAAAACAGTGCTCATTATGGAACTGATTAACAATGTTGCCAAAGCTCA 828
|||||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct 720 TGCTGGTGTTGGGAAAACTGTGCTTATTATGGAGCTGATCAACAATGTTGCAAAAGCTCA 779
Query 829 TGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGATTTGTA 888
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 780 TGGTGGTTTCTCTGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTA 839
Query 889 CAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGAGAGAAACAGTCTGAGAGCAAATG 948
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 840 CAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAGTG 899
Query 949 TGCCCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGGACTGAC 1008
||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 900 TGCTCTAGTGTACGGACAAATGAATGAGCCCCCGGGTGCCCGTGCCCGTGTTGGACTGAC 959
Query 1009 TGGTTTGACTGTTGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCTTTTCAT 1068
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 960 TGGTTTGACTGTTGCCGAGTATTTCCGTGATGCCGAAGGCCAAGACGTCTTGCTTTTCAT 1019
Query 1069 TGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCGTTGCTCGGTCGTAT 1128
||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct 1020 TGACAACATTTTCCGTTTCACTCAGGCCAACTCTGAAGTGTCTGCTTTGCTTGGTCGTAT 1079
Query 1129 CCCGTCTGCTGTGGGGTACCAGCCAACTCTGGCTTCCGATCTTGGTGCTCTTCAAGAGCG 1188
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1080 CCCGTCTGCTGTGGGCTACCAGCCAACTCTGGCTTCCGATCTTGGTGCTCTTCAAGAGAG 1139
Query 1189 AATCACAACCACCAAGAAAGGTTCAATTACCTCTGTCCAAGCCATCTATGTCCCTGCTGA 1248
||| || |||||||||||||| || || ||||| ||||||||||||||||| ||||||||
Sbjct 1140 AATTACTACCACCAAGAAAGGGTCTATCACCTCAGTCCAAGCCATCTATGTACCTGCTGA 1199
Query 1249 TGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGATGCCACAACTGTGCT 1308
||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1200 TGATTTGACTGATCCTGCTCCTGCTACAACTTTTGCTCACTTGGACGCCACAACTGTGCT 1259
Query 1309 TTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCGACGTC 1368
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1260 TTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCAACATC 1319
Query 1369 CCGTATGCTCTCGCCCCACATTCTAGGTGAGGAGCACTACAACACAGCTCGTGGTGTGCA 1428
||||||||| || || |||||||| || ||||||||||||||||| |||||||| |||||
Sbjct 1320 CCGTATGCTGTCACCTCACATTCTGGGAGAGGAGCACTACAACACGGCTCGTGGCGTGCA 1379
Query 1429 GAAAGTGTTGCAGAATTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAATGGATGA 1488
||||||| | ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1380 GAAAGTGCTACAGAACTACAAGAACTTGCAAGATATTATAGCCATTTTGGGAATGGATGA 1439
Query 1489 GCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAG 1548
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 GCTAAGTGAAGATGACAAGTTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAG 1499
Query 1549 TCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAA 1608
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1500 TCAGCCATTCCACGTTGCTGAGATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAA 1559
Query 1609 AGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACA 1668
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1560 AGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCTGAACA 1619
Query 1669 ATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAA 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 ATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAA 1679
Query 1729 AGAGTCAGCAGCTTAGAAGC-TGGATCCATCTCTTGCATATGCTTAATACCTGTCTG-TT 1786
||||||||||||||| | | | ||| || ||||| ||| ||||||||| | ||| ||
Sbjct 1680 AGAGTCAGCAGCTTA-AGGGATTGATTCAGCTCTTTCAT--GCTTAATACTTCTCTTATT 1736
Query 1787 TCTTGTGACAATAACGAAAAGaaaaaaaCCACTGCCTGTGAGTTACCCACACCAAGCGGA 1846
| || ||||||||||||||| |||||||| | |||||| || | ||| ||||| ||||
Sbjct 1737 T-TTCTGACAATAACGAAAAAAAAAAAACAA-TGCCTGCGACTC-CCCG-ACCAAACGGA 1792
Query 1847 ATTTGAGTTCCGTATTTATAGTTTCTTTCG----AA-TTCCTTGAGAGCTA-CGAGATGA 1900
|| ||||||||||| |||||| |||||| | || |||| |||||||| | ||||||
Sbjct 1793 ATCTGAGTTCCGTAATTATAGCTTCTTTTGGTTCAAATTCCATGAGAGCTGGCAAGATGA 1852
Query 1901 TGCTGAACATACCCTTCATTCCCTTGT-ACTCAGATTTTTGGTT 1943
| ||||||| | || | || | | || ||||| ||||||||||
Sbjct 1853 TACTGAACAGATCCAT--TTAC-T-GTTACTCAAATTTTTGGTT 1892
> Ahg487711 jgi|Araly1|487711|fgenesh2_kg.6__845__AT5G08670.1
Length=1737
Score = 2385 bits (1291), Expect = 0.0
Identities = 1564/1695 (92%), Gaps = 22/1695 (1%)
Strand=Plus/Plus
Query 55 CACCACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCTTCTT-CGAGTA 113
|||| || |||||||| |||| || | |||||||| ||||||||||| |||| || | |
Sbjct 6 CACC-CACTCATGGCGTCTCGGAGAGTTTTATCATCTCTTCTCCGTTCATCTTCCG-GCA 63
Query 114 GATCTACTTCTAAATCCTCCTTGATCGGGAGCCGAAACCCGAGGCTTTTATCCCCCGGTC 173
||||| || | ||| | | | || | ||| ||||| |||| || | | || ||
Sbjct 64 GATCTGCTGCCAAA-----C-T-A--GGCAACCGTAACCCCAGGC-TTCCTTCTCC-TTC 112
Query 174 -CC-GCGCATGGA-GCCGCTCCATGT-GGGACTCTCCTTGGCCGAGTCGCCGAGTATTCG 229
|| |||| | | |||||||||||| | || ||||| ||||| ||||||||||| |
Sbjct 113 ACCTGCGCGT-CACGCCGCTCCATGTAGCTAC-CTCCTCGGCCGCGTCGCCGAGTACGCC 170
Query 230 ACTTCTTCTCCGGCTAA-TTCGGCTGCACCATCTTCTGCTCCTGCTAAAGATGAGGGAAA 288
|| ||||| ||||| || || ||||| ||||| |||||||||||||| |||||||| ||
Sbjct 171 ACCTCTTCACCGGC-AAGCTCAGCTGCGCCATCCTCTGCTCCTGCTAAGGATGAGGGGAA 229
Query 289 GAAGACCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTATTGGTGC 348
|||||||||||||||||| |||||||| |||||||||||||| || || || ||||||||
Sbjct 230 GAAGACCTATGATTACGGAGGCAAAGGTGCGATCGGGCGTGTTTGCCAAGTCATTGGTGC 289
Query 349 CATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATCTCTCGA 408
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 290 CATTGTTGATGTGAGATTCGAAGATCAGGAAGGATTGCCTCCGATCATGACATCTCTCGA 349
Query 409 GGTACAGGATCATCCAACAAGGTTGGTCCTTGAGGTGTCTCATCACTTGGGTCAAAATGT 468
||| |||||||| || |||||| |||| ||||||||||| || || ||||||||||||||
Sbjct 350 GGTGCAGGATCACCCCACAAGGCTGGTACTTGAGGTGTCCCACCATTTGGGTCAAAATGT 409
Query 469 CGTTAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAGGTTCTCAA 528
||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 410 CGTCAGGACCATTGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAAGTTCTCAA 469
Query 529 CACTGGTGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCATGAACGT 588
||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||
Sbjct 470 CACTGGTGCTCCAATCACTGTGCCTGTTGGAAGAGCTACCCTTGGACGTATCATGAATGT 529
Query 589 TCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACCCATTCA 648
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 530 TCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCA 589
Query 649 CAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTCGCTACTGGTAT 708
|||||| || || |||||||||||| | || || || |||||||| || || ||||||||
Sbjct 590 CAGAGATGCACCGGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTAT 649
Query 709 TAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTTTGGCGG 768
||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 650 TAAGGTTGTTGATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGG 709
Query 769 TGCTGGTGTTGGGAAAACAGTGCTCATTATGGAACTGATTAACAATGTTGCCAAAGCTCA 828
||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 710 AGCTGGTGTTGGGAAAACTGTGCTTATTATGGAACTGATCAACAATGTTGCAAAAGCTCA 769
Query 829 TGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGATTTGTA 888
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 770 TGGTGGTTTCTCTGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTA 829
Query 889 CAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGAGAGAAACAGTCTGAGAGCAAATG 948
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 830 CAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAATG 889
Query 949 TGCCCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGGACTGAC 1008
||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 890 TGCTCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGGACTGAC 949
Query 1009 TGGTTTGACTGTTGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCTTTTCAT 1068
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 950 TGGTTTGACTGTTGCCGAGTATTTCCGTGATGCTGAAGGCCAGGATGTCTTGCTTTTCAT 1009
Query 1069 TGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCGTTGCTCGGTCGTAT 1128
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1010 TGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTAT 1069
Query 1129 CCCGTCTGCTGTGGGGTACCAGCCAACTCTGGCTTCCGATCTTGGTGCTCTTCAAGAGCG 1188
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1070 CCCGTCTGCTGTGGGTTACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCG 1129
Query 1189 AATCACAACCACCAAGAAAGGTTCAATTACCTCTGTCCAAGCCATCTATGTCCCTGCTGA 1248
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1130 AATCACAACCACCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCCTGCTGA 1189
Query 1249 TGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGATGCCACAACTGTGCT 1308
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1190 TGATTTGACAGATCCTGCTCCTGCCACAACATTTGCTCACTTGGACGCCACAACTGTGCT 1249
Query 1309 TTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCGACGTC 1368
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1250 TTCAAGACAGATTTCTGAGCTTGGTATCTATCCTGCTGTGGATCCTTTGGATTCGACGTC 1309
Query 1369 CCGTATGCTCTCGCCCCACATTCTAGGTGAGGAGCACTACAACACAGCTCGTGGTGTGCA 1428
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1310 CCGTATGCTCTCGCCCCACATTCTTGGTGAGGAGCACTACAACACTGCTCGTGGTGTGCA 1369
Query 1429 GAAAGTGTTGCAGAATTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAATGGATGA 1488
|||||| | ||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1370 AAAAGTGCTACAGAACTACAAGAACTTGCAAGATATTATCGCCATTTTGGGTATGGATGA 1429
Query 1489 GCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAG 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 GCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAG 1489
Query 1549 TCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAA 1608
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1490 TCAGCCATTCCATGTTGCTGAAATCTTTACTGGTGCCCCTGGAAAATATGTCGACCTTAA 1549
Query 1609 AGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACA 1668
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 AGAAAACATTAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACA 1609
Query 1669 ATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAA 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1610 ATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAA 1669
Query 1729 AGAGTCAGCAGCTTA 1743
|||||| ||||||||
Sbjct 1670 AGAGTCGGCAGCTTA 1684
> Ahg933138 jgi|Araly1|933138|scaffold_401126.1
Length=326
Score = 189 bits (102), Expect = 7e-47
Identities = 102/102 (100%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1629 AGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACATGGTTGGAG 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 AGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACATGGTTGGAG 284
Query 1689 GTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAG 1730
||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 GTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAG 326
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76218580245
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5