BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G09930.1
Length=2037
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487818 jgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1 3336 0.0
Ahg496704 jgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1 1751 0.0
> Ahg487818 jgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1
Length=2037
Score = 3336 bits (1806), Expect = 0.0
Identities = 1963/2040 (96%), Gaps = 6/2040 (0%)
Strand=Plus/Plus
Query 1 ATGGTATTAACGACGAATCTCTATAGCTTAAACCTTCGTTC-GACCTTCTTCTTCACTAA 59
|||| |||||||||||||||| ||||||||||||||||||| | ||||||||||||||||
Sbjct 1 ATGGGATTAACGACGAATCTCCATAGCTTAAACCTTCGTTCTG-CCTTCTTCTTCACTAA 59
Query 60 TACTATTACTTGCCCTACACTTTTCACCTTCAAACTCTCCTCTGTTTCTAACCCTAGACG 119
| || || |||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 60 TCCTCTTCCTTGCCATACACTATTCACCTTCAAACTCTCCTCTGTTTCTAACCCTAGACG 119
Query 120 AGTATTCCCCAATATTAGAGCTCACGTTTCCGCAGCCAGCTCCAATTCAGAGCTCGAATC 179
|| |||||||||||||| ||| || ||||||||| |||||||||||||||||||||| ||
Sbjct 120 AGAATTCCCCAATATTATAGCCCAAGTTTCCGCAACCAGCTCCAATTCAGAGCTCGAGTC 179
Query 180 TCTCTTATCTACCGATCGGAAGCTGATCAGTAAGCAATCAAACAATGGTGCGTCTTCGAT 239
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 180 TCTCTTGTCTACCGATCGGAAGCTGATCGGTAAGCAATCAAACAATGGTGCGTCTTCGAT 239
Query 240 TTCGTCGGGAGTGAGACTTGAGAACATTAGTAAGAGCTATGAAGGCATTAC-GGTGCTAA 298
|||||| ||||||||||||||||||||||||||||||||||||||| |||| || |||||
Sbjct 240 TTCGTCTGGAGTGAGACTTGAGAACATTAGTAAGAGCTATGAAGGCGTTACAGG-GCTAA 298
Query 299 AGGATGTGACTTGGGAAGTGAAGAAAGGAGAAAAAGTAGGGTTAATCGGCGTCAACGGTG 358
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 299 AGGATGTGACTTGGGAAGTGAAGAAAGGAGAAAAAGTAGGTTTAATCGGCGTTAACGGTG 358
Query 359 CAGGGAAGACGACACAGCTCAGGATCATAACGGGTCAAGAAGAACCTGATTCAGGAAACG 418
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 359 CGGGGAAGACGACACAGCTCAAGATCATAACGGGTCAAGAAGAACCTGATTCAGGAAACG 418
Query 419 TGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCTTGAGTCAAGAGTTCGAGGTTTCAA 478
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 419 TGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCTTGAGTCAAGAATTCGAGGTTTCGA 478
Query 479 TGGGGAAGACAGTGAAGGAAGAGTTCATGTGTACGTTTAAGGAAGAGATGGAAATAGCGA 538
||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |
Sbjct 479 TGGGGAAGACAGTGAAGGAAGAGTTCATGAGTGCGTTTAAGGAAGAGATGGAAGTAGCAA 538
Query 539 GGAAGCTTGAGAACTTGCAGAAGGCGATTGAAGAAGCTGTTGATGATTTAGAACTAATGG 598
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 GGAAGCTTGAGAGGTTGCAGAAGGCGATTGAAGAAGCTGTTGATGATTTAGAACTAATGG 598
Query 599 GAAAGTTACTAGACGAATTCGATTTGTTGCAGAGACGAGCTCAAGAGGTTGATTTGGATT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 GAAAGTTACTAGACGAATTCGATTTGTTGCAGAGACGAGCTCAAGAGGTTGATTTGGATT 658
Query 659 CTATCCATGCTAAAATCAGTAAGCTGATGTCGGAATTAGGGTTTGTGTCGGAGGATGCTG 718
|| || ||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
Sbjct 659 CTGTCGATGCTAAAATCAGTAAGCTTATGTCGGAATTAGGGCTTGTGTCGGAGGATGCAG 718
Query 719 ATAGGCTTGTGGCTTCTTTTAGCAGTGGATGGCAAATGAGAATGTCACTTGGGAAGATTT 778
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 719 ATAGGCTTGTGGCTTCTTTTAGTAGTGGATGGCAAATGAGAATGTCACTTGGGAAGATTT 778
Query 779 TGCTTCAGAATCCAGATTTACTGCTTTTGGATGAGCCAACGAATCATTTGGATCTTGATA 838
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 779 TGCTTCAGAATCCAGATTTACTGCTATTGGATGAGCCAACGAATCATTTGGATCTTGATA 838
Query 839 CTATTGAGTGGCTTGAAGGTTACTTGATTAAGCAAGATGTGCCTATGGTCATAATATCAC 898
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 839 CTATTGAGTGGCTTGAAGGTTACTTGAATAAGCAAGATGTGCCTATGGTTATAATATCAC 898
Query 899 ATGACAGGGCGTTTCTTGATCAGTTGTGTACTAAAATTGTGGAAACCGAAATGGGAGTTT 958
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 ATGACAGAGCGTTTCTTGATCAGTTGTGTACTAAAATTGTGGAAACCGAAATGGGAGTTT 958
Query 959 CGAGGACTTTCGATGGTAATTACTCTCAGTATGTAATTTCAAAGGCAGAGTTGGTTGAAG 1018
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 959 CGAGGACTTTCGAGGGTAATTACTCTCAGTATGTAATTTCAAAGGCAGAGTGGGTCGAAG 1018
Query 1019 CTCAGTATGCTGCTTGGGAGAAGCAACAGAAAGAGATTGAAGCAACAAAGGATTTGATTA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 CTCAGTATGCTGCTTGGGAGAAGCAACAGAAAGAGATTGAAGCAACAAAGGATTTGATTA 1078
Query 1079 GTAGGCTAAGTGCTGGAGCAAATTCTGGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGA 1138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 CTAGGCTAAGTGCTGGAGCAAATTCTGGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGA 1138
Query 1139 AGCTTCAGGAAGAGGAGCTAATAGAGAAGCCATTTCAGCGGAAACAAATGAAAATCCGGT 1198
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1139 AGCTTCAAGAAGAGGAGCAAATAGAGAAGCCATTTCAGCGGAAACAAATGAAAATCAGGT 1198
Query 1199 TTCCGGAATGTGGATTAAGTGGAAGATCTGTAGTCACTGTTAAGAATCTTGTATTTGGTT 1258
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1199 TTCCGGAATGTGGATTAAGCGGAAGATCTGTAGTCACTGTTAAGAATCTTGGATTTGGTT 1258
Query 1259 TTGATGATAAGATGTTATTTAACAAGGCGAATCTAGCTATAGAAAGAGGAGAGAAAGTCG 1318
|||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1259 TTGAGGATAAGATGTTATTTAACAAGGCAAATCTAGCGATAGAAAGAGGAGAGAAAGTCG 1318
Query 1319 CTATAATTGGTCCAAACGGGTGCGG-AAAGAGTACATTGCTGAAACTTATTATGGGTTTG 1377
||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||
Sbjct 1319 CTATAATTGGTCCAAACGGGTGCGGTAAA-AGTACATTGTTGAAACTGATTATGGGTTTG 1377
Query 1378 GAGAAGCCTATGAGAGGTGAGGTGATACTTGGGGAGCACAATGTATTGCCAAACTACTTC 1437
|||||||||||||||||||| ||||| || |||||||||||||| ||||| |||||||||
Sbjct 1378 GAGAAGCCTATGAGAGGTGAAGTGATTCTCGGGGAGCACAATGTCTTGCCTAACTACTTC 1437
Query 1438 GAGCAGAATCAGGCAGAGGCTCAAGATTTGGATAAAACGGTGATTGAGACAGTTGTTGAA 1497
|| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1438 GAACAGAATCAGGCAGAGGCTCTAGATTTGGATAAAACTGTGATTGAGACAGTTGTTGAA 1497
Query 1498 GCTGCTGTAGATTGGAGAATTGATGATATAAAAGCTCTTCTTGGTCGGTGCAACTTCAAA 1557
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1498 GCTGCTGTAGATTGGAGAATTGATGATATAAAAGCTCTTCTTGGTCGCTGCAACTTCAAA 1557
Query 1558 GCTGACATGTTGGATAGAAAGGTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 GCTGACATGTTGGATAGAAAGGTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCT 1617
Query 1618 TTCTGCAAATTCATGGTGAAACCATCCACTCTACTTGTGTTGGACGAACCCACCAATCAC 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 TTCTGCAAATTCATGGTGAAACCATCCACTCTACTTGTGTTGGACGAACCCACCAATCAC 1677
Query 1678 TTAGACATACCTTCAAAAGAAATGCTTGAGGAAGCTATAAATGAGTACAAAGGCACGGTC 1737
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1678 TTAGACATACCTTCAAAAGAAATGCTTGAGGAAGCGATAAATGAGTACAAAGGCACGGTC 1737
Query 1738 ATCACAGTCTCACACGATAGATACTTCATTAAACAGATTGTTAACAGAGTTATTGAAGTC 1797
||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1738 ATCGCAGTCTCACACGATAGATACTTCATTAAACAAATTGTTAACAGAGTAATTGAAGTC 1797
Query 1798 AGAGATGGTGGTTTAATGGACTATGCAGGAGACTACAATTATTTCCTGGAGAAGAATGTT 1857
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1798 AGAGATGGTGGTTTAATGGACTATGCAGGAGACTACAATTATTACCTAGAGAAGAATGTT 1857
Query 1858 GAAGCTAGAGCAAGGGAGCTGGAGAGGGAAGCAGAATTGGAAGAAAAAGCTCCAAAAGTG 1917
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1858 GAAGCTAGAGCAAGGGAGCTGGAGAGGGAAGCAGAATTGGAGGAAAAAGCTCCAAAAGTG 1917
Query 1918 AAAGCAAAGTCAAAGATGTCAAAGGCTGAGAGAGAAGCACGGAAGAAGCAAAAGATGAAA 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 AAAGCAAAGTCAAAGATGTCAAAGGCTGAGAGAGAAGCACGGAAGAAGCAAAAGATGAAA 1977
Query 1978 GCGTTTCAAGCTTCCAAAAAGAAGTCAAAGTCCAGCAAAAATGCCAAGAGATGGAATTAA 2037
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1978 GCGTTTCAAGCTTCCAAAAACAAGTCTAAGTCCAGCAAAAATGCCAAGAGATGGAATTAA 2037
> Ahg496704 jgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1
Length=2367
Score = 1751 bits (948), Expect = 0.0
Identities = 1552/1841 (84%), Gaps = 51/1841 (3%)
Strand=Plus/Plus
Query 218 CAAACAATGGTGCGTCTTCGATTTCGTCGGGAGTG-AGACTTGAGAACATTAGTAAGAGC 276
|||| || || || ||| ||||||||| || ||| || || |||||||| || ||||||
Sbjct 358 CAAA-AACGGAGCTTCTGGGATTTCGTCAGGTGTGAAG-CTAGAGAACATAAGGAAGAGC 415
Query 277 TATGAAGGCATTACGGTGC-TAAAGGATGTGACTTGGGAAGTGAAGAA-AGGAGAAAAAG 334
|| ||||| | || |||| |||| |||||||| ||||||||||| || || || ||||
Sbjct 416 TACAAAGGCGTGACTGTGCTTAAA-GATGTGACCTGGGAAGTGAA-AAGGGGTGAGAAAG 473
Query 335 TAGGGTTAATCGGCGTCAACGGTGCAGGGAAGACGACACAGCTCAGGATCATAACGGGTC 394
|||||||| | || || ||||| || ||||||||||| ||||||||||| || || ||||
Sbjct 474 TAGGGTTAGTGGGAGTGAACGGAGCTGGGAAGACGACTCAGCTCAGGATTATCACTGGTC 533
Query 395 AAGAAGAACCTGATTCAGGAAACGTGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCT 454
||||||| ||||||||||| ||||| || ||||||||||||| ||||| | |||||||
Sbjct 534 AAGAAGAGCCTGATTCAGGTAACGTAATCAAGGCCAAACCCAATATGAAAATAGCTTTCT 593
Query 455 TGAGTCAAGAGTTCGAGGTTTCAATGGGGAAGACAGTGAAGGAAGAGTTCATGTGTACGT 514
|||| || || || |||||||| ||| | ||||| |||| ||||||||||||| || | |
Sbjct 594 TGAGCCAGGAATTTGAGGTTTCGATGAGTAAGACGGTGAGGGAAGAGTTCATGAGTGCTT 653
Query 515 TTAAGGAAGAGATGGAAAT-AGC-GAGGAAGCTTGAG-AACTTGCAGAAGGCGATTGAAG 571
|||||||||||||||| || | | || |||||||||| || || |||||||| |||||||
Sbjct 654 TTAAGGAAGAGATGGAGATCA-CTGA-GAAGCTTGAGAAAGTT-CAGAAGGCTATTGAAG 710
Query 572 AAGCTGTTGATGATTTAGAACTAATGGGAAAGTTACTAGACGAATTCGATTTGTTGCAGA 631
| ||||||||||||| || || ||||||| |||| |||| ||||| |||||||||||||
Sbjct 711 GATCTGTTGATGATTTGGATCTTATGGGAAGGTTATTAGATGAATTTGATTTGTTGCAGA 770
Query 632 GACGAGCTCAAGAGGT-TG-ATTTGGATTCTATCCATGCTAAAATCAGTAAGCTGATGTC 689
||||||||| || | | || |||||||||| | ||||||| || |||||| ||||| |
Sbjct 771 GACGAGCTC-AG-GCTGTGAATTTGGATTCCGTTGATGCTAAGATTAGTAAGTTGATGCC 828
Query 690 GGAATTAGGGTTTGTGTCGGAGGATGCTGATAGGCTTGTGGCTTCTTTTAGCAGTGGATG 749
||||||||| |||| || |||||||||||||||||||||||||| ||||| |||||||
Sbjct 829 GGAATTAGGTTTTGCCTCAGAGGATGCTGATAGGCTTGTGGCTTCCTTTAGTGGTGGATG 888
Query 750 GCAAATGAGAATGTCACTTGGGAAGATTTTGCTTCAGAATCCAGATTTACTGCTT-TTGG 808
||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| || |
Sbjct 889 GCAAATGAGAATGTCACTTGGAAAGATTTTGCTTCAGGATCCAGATTTGCTGCTTCTT-G 947
Query 809 ATGAGCCAACGAATCATTTGGATCTTGATACTATTGAGTGGCTTGAAGGTTACTTG-ATT 867
||||||| || || |||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 948 ATGAGCCGACCAACCATTTGGATCTTGATACTATTGAGTGGCTTGAAGGTTATTTGCAG- 1006
Query 868 AAGCAAGATGTGCCTATGGTCATAATATCACATGACAGGGCGTTTCTTGATCAGTTGTGT 927
|||||||||||||||||||| || || ||||||||||| || |||||||||||||| |||
Sbjct 1007 AAGCAAGATGTGCCTATGGTTATTATTTCACATGACAGAGCCTTTCTTGATCAGTTATGT 1066
Query 928 ACTAAAATTGTGGAAACCGAAATGGGAGTTTCGAGGAC-TTTCGATGGTAATTACTCTCA 986
||||||||||||||||| || ||||| || || ||||| ||| || |||||||| |||||
Sbjct 1067 ACTAAAATTGTGGAAACTGAGATGGGTGTGTCCAGGACATTT-GAGGGTAATTATTCTCA 1125
Query 987 GTATGTAATTTCAAAGGCAGAGTTGGTT-GAAGCTCAGTATGCTGCTTGGGAGAAGCAAC 1045
|||||| || ||||||||||||| || | ||| ||||| |||| |||||||| |||||||
Sbjct 1126 GTATGTGATCTCAAAGGCAGAGT-GGATCGAAACTCAGAATGCAGCTTGGGAAAAGCAAC 1184
Query 1046 AGAAAGAGATTGAAGCAACAAAGGATTTGATTAG-TAGGCTAAGTGCTGGAGCAAATTCT 1104
|||||||||| || |||| ||||| ||||| | |||||| ||||||| || ||||||
Sbjct 1185 AGAAAGAGATCGATTCAACTAAGGACTTGATC-GCTAGGCTTGGTGCTGGTGCCAATTCT 1243
Query 1105 GGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGAAGCTTCAGGAAGAGGAGCTAATAGAG 1164
||||| |||||| | |||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct 1244 GGTCGTGCTTCTACTGCAGAAAAGAAACTAGAGAAGCTTCAAGAACAGGAGCTAATAGAA 1303
Query 1165 AAGCCATTTCAGCGGAAACAAATGAAAATCCGGTTTCCGGAATGTGGATTAAGTGGAAGA 1224
|||||||||||||||||||| ||||| || ||||||| || ||||| ||||||||||
Sbjct 1304 AAGCCATTTCAGCGGAAACAGATGAAGATAAGGTTTCCAGAGCGTGGAACAAGTGGAAGA 1363
Query 1225 TCTGTAGTCACTGTTAAGAATC-TTGTATTT-GGTTTTGATGATAAGATGTTATTTAACA 1282
|| ||||||| |||||| || | ||| |||| ||||| || ||||||||| ||||||| |
Sbjct 1364 TCGGTAGTCAATGTTAAAAA-CATTG-ATTTTGGTTTCGAGGATAAGATGCTATTTAAGA 1421
Query 1283 AGGCGAATCTAGCTATAGAAAGAGGAGAGAAAGTCGCTATAATTGGTCCAAACGGGTGCG 1342
|||| |||||| | ||||||||||| |||||| |||| || ||||| || ||||| ||||
Sbjct 1422 AGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCGCCATTATTGGCCCGAACGGTTGCG 1481
Query 1343 GAAAGAGTACATTGCTGAAACTTA-TTATGGGTTTGGAGAAGCCTATGAGAGGTGAGGTG 1401
|||||||||| || |||| ||| |||||||||| || |||||||||| |||||| ||
Sbjct 1482 GAAAGAGTACGTTATTGAAG-TTAATTATGGGTTTAGAAAAGCCTATGAAAGGTGAAGTT 1540
Query 1402 ATACTTGGGGAGCACAATGTATTGCCAAACTACTTCGAGCAGAATCAGGCAGAGGCTCAA 1461
|| ||||| |||||||||||| ||||||||||||| || ||||||||||| |||| ||
Sbjct 1541 ATTCTTGGAGAGCACAATGTACTGCCAAACTACTTTGAACAGAATCAGGCCGAGG-TCCT 1599
Query 1462 -GATTTGGATAAAACGGTGATTGAGACAGTT-GTTGAAGCTGCTGTAGATTGGAGAATTG 1519
|||||||||||||| ||| |||| |||||| || |||||||| | ||| ||||||| ||
Sbjct 1600 TGATTTGGATAAAACAGTGCTTGAAACAGTTTGT-GAAGCTGCAGAAGACTGGAGAAGTG 1658
Query 1520 ATGATATAAAAGCTCTTCTTGGTCGGTGCAACTTCAAAGCTGACATG-TTGGATAGAAAG 1578
|||||||||||| ||||||||| || |||||||||||||| |||||| ||| || |||||
Sbjct 1659 ATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAAGCAGACATGCTTG-ATCGAAAG 1717
Query 1579 GTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCTTTCTGCAAATTCATGGTGAAA 1638
||||||||||| || ||||||||||| || || |||||||||||||||||||||||||
Sbjct 1718 GTCTCTCTTTTAAGCGGTGGTGAGAAAGCGCGTCTTGCTTTCTGCAAATTCATGGTGACG 1777
Query 1639 CCATCCACTCTACTTGTGT-TGGACGAACCCACCAATCACTTAGACATACCTTCAAAAGA 1697
||||| ||| | || || | |||||||||| || |||||||||||||| |||||||||||
Sbjct 1778 CCATCAACTTTTCTCGT-TCTGGACGAACCAACTAATCACTTAGACATTCCTTCAAAAGA 1836
Query 1698 AATGCTTGAGGAAGCTATAAATGAGTACAAAGGCACGGTCATCACAGTCTCACACGATAG 1757
||||||||||||||| ||||| |||||| |||| || |||||| | || || |||||| |
Sbjct 1837 AATGCTTGAGGAAGCGATAAACGAGTACCAAGGTACAGTCATCGCGGTATCCCACGATCG 1896
Query 1758 ATACTTCATTAAACAGATTGTTAACAGAGTTATTGAAGTCAGAG-ATGGTGGTTTA-ATG 1815
|||||| || ||||| || ||||||||||| || ||||| |||| ||||| ||||| | |
Sbjct 1897 ATACTTTATCAAACAAATCGTTAACAGAGTGATAGAAGT-AGAGGATGGTTGTTTAGAAG 1955
Query 1816 GACTATGCAGGAGACTACAATTATTTCCTGGAGAAGAATGTTGAAGCTAGAGCAAGGGAG 1875
| |||||||| ||||||||||||| | ||||||||||| | || ||||| |||| |||
Sbjct 1956 -ATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTGGATGCTAGGGCAAAAGAG 2014
Query 1876 CTGGAGAGGGAAGCAGAATTGGAAGAAAAAGCTCCAAAAGTGAAAGCAAAGTCAAAGATG 1935
|||||||| |||||||| | ||||| ||||||||||||||||| |||||||||||||||
Sbjct 2015 CTGGAGAGAGAAGCAGAGCTAGAAGAGAAAGCTCCAAAAGTGAAGGCAAAGTCAAAGATG 2074
Query 1936 TCAAAGGCTGAGAGAGAAGC-ACGGAAGAAGCAAAAGATGAAAGCGTTTCAAGCTTCCAA 1994
||||| ||||||| |||||| | |||||||||| |||||| ||||||||||| | | |
Sbjct 2075 TCAAAAGCTGAGAAAGAAGCGA-GGAAGAAGCAGAAGATGCAAGCGTTTCAA-CAAGCTA 2132
Query 1995 AA-AGAAGTCAAAGTCCAGCAAAAA-TGCCAAGAGATGGAA 2033
|| |||| |||||| | ||||| || | |||||||||||||
Sbjct 2133 AACAGAAATCAAAGGCTAGCAAGAACT-CCAAGAGATGGAA 2172
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76599482695
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5