BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G10240.1
Length=2030
Score E
Sequences producing significant alignments: (Bits) Value
Ahg940494 jgi|Araly1|940494|scaffold_601038.1 3033 0.0
Ahg496723 jgi|Araly1|496723|fgenesh2_kg.8__2539__AT5G65010.2 1989 0.0
Ahg350435 jgi|Araly1|350435|fgenesh1_pg.C_scaffold_6001028 137 3e-31
Ahg893177 jgi|Araly1|893177|Al_scaffold_0006_1173 126 6e-28
> Ahg940494 jgi|Araly1|940494|scaffold_601038.1
Length=1782
Score = 3033 bits (1642), Expect = 0.0
Identities = 1729/1772 (98%), Gaps = 2/1772 (0%)
Strand=Plus/Plus
Query 25 TCTCTTATTGCCGCCACCACCACCATGTGTGGGATTCTCGCTGTGTTAGGCTGCGTCGAT 84
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 2 TCTCTTATTGCCGCCACCACCACCATGTGTGGGATTCTTGCTGTGTTAGGCTGCGTTGAT 61
Query 85 AACTCTCAAGCTAAACGTTCCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGT 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 62 AACTCTCAAGCTAAACGTTCCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGT 121
Query 145 CCTGACTGGAGTGGTCTACATTGTTATGAGGATTGTTATTTGGCTCATGAGCGTTTGGCT 204
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 122 CCTGACTGGAGTGGGCTACATTGTTTTGAGGATTGTTATTTGGCTCATGAGCGTTTGGCT 181
Query 205 ATCGTTGACCCCACTTCTGGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTC 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 ATCGTTGACCCCACTTCTGGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTC 241
Query 265 ACGGTCAATGGAGAGATTTACAACCACAAGGCTTTGCGTGAAAATTTGAAGTCTCACCAA 324
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 242 ACGGTCAATGGAGAGATATACAACCACAAGGCTTTGCGTGAAAATCTGAAGTCTCACCAG 301
Query 325 TTCCGTACTGGGAGTGATTGTGAAGTGATTGCCCATCTTTACGAAGAACATGGAGAGGAA 384
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 302 TTTCGTACTGGGAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAACATGGAGAGGAA 361
Query 385 TTTGTCGACATGTTGGATGGCATGTTTGCATTTGTGCTTCTTGATACCCGAGACAAAAGC 444
||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||
Sbjct 362 TTTGTCGACATGTTGGACGGCATGTTTGCATTTGTCCTTCTTGATTCCCGAGACAAAAGT 421
Query 445 TTTATTGCTGCAAGGGATGCCATTGGTATCACTCCACTCTACATCGGGTGGGGTCTCGAT 504
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 422 TTTATTGCTGCAAGGGATGCCATTGGTATCACTCCACTCTACATTGGGTGGGGTCTCGAT 481
Query 505 GGTTCTGTTTGGTTTGCTTCCGAGATGAAAGCACTTAGTGATGATTGTGAGCAGTTTATG 564
|||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 482 GGTTCTGTCTGGTTTGCTTCGGAGATGAAAGCACTTAGTGATGATTGTGAACAGTTTATG 541
Query 565 TGCTTCCCCCCAGGCCACATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAAC 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 TGCTTCCCCCCAGGCCACATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAAC 601
Query 625 CCCCCGTGGTTCTCTGAGGTT-GTTCCTTCAACCCCATATGATCCCCTAGTGGTGCGCAA 683
||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 602 CCCCCGTGGTTCTCTGA-GTTGGTTCCTTCAACCCCATATGATCCCCTATTGGTGCGCAA 660
Query 684 TACTTTTGAGAAGGCTGTTATAAAACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCT 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TACTTTTGAGAAGGCTGTTATAAAACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCT 720
Query 744 ATCTGGTGGATTAGATTCATCCCTTGTTGCTTCAGTAGCATTACGCCATCTGGAAAAATC 803
|||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 721 ATCTGGAGGATTAGACTCATCCCTTGTTGCTTCAGTAGCGTTACGCCATCTGGAAAAATC 780
Query 804 AGAAGCTGCTTGTCAGTGGGGTTCAAAGTTGCACACATTTTGTATCGGTTTGAAGGGATC 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 AGAAGCTGCTTGTCAGTGGGGTTCAAAGTTGCACACATTTTGTATCGGTTTGAAGGGATC 840
Query 864 CCCGGATCTTAAAGCTGGCAGAGAAGTCGCTGACTATTTAGGAACTCGCCACCACGAGTT 923
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 841 CCCGGATCTGAAAGCTGGCAGAGAAGTCGCTGACTATTTAGGAACTCGCCACCATGAGTT 900
Query 924 ACACTTTACAGTTCAGGACGGAATAGATGCCATAGAAGAAGTCATCTACCATGTTGAGAC 983
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 901 ACACTTTACAGTCCAGGACGGAATAGATGCCATAGAAGAAGTCATATACCATGTTGAGAC 960
Query 984 CTATGATGTGACTACTATTAGAGCCAGCACTCCAATGTTTCTTATGTCGCGAAAAATCAA 1043
|||||| || |||||||| ||||||||||||||||||||||| |||||| ||||||||||
Sbjct 961 CTATGACGTAACTACTATAAGAGCCAGCACTCCAATGTTTCTAATGTCGAGAAAAATCAA 1020
Query 1044 ATCGCTTGGTGTAAAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGATA 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ATCGCTTGGTGTAAAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGATA 1080
Query 1104 TTTGTACTTCCATAAAGCTCCCAACAAGAAGGAATTTCATGAGGAAACATGTCGAAAGAT 1163
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1081 TTTGTACTTCCATAAAGCACCCAACAAGAAGGAATTTCACGAGGAAACATGTCGAAAGAT 1140
Query 1164 CAAAGCTCTTCATCAATATGACTGCTTGAGGGCTAACAAATCAACTTCTGCATGGGGTGT 1223
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1141 CAAAGCTCTTCATCAATATGATTGCTTGAGAGCTAACAAATCAACTTCTGCATGGGGTGT 1200
Query 1224 TGAGGCTCGTGTACCTTTCCTCGATAAAGAATTTATAAATGTCGCAATGAGCATCGATCC 1283
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1201 TGAGGCCCGTGTACCTTTCCTGGATAAAGAATTTATTAATGTCGCAATGAGCATCGATCC 1260
Query 1284 AGAGTGGAAGATGATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAATGC 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 AGAGTGGAAGATGATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAATGC 1320
Query 1344 CTTTGATGATGAGAAAAATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGAACA 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 CTTTGATGATGAGAAAAATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGAACA 1380
Query 1404 GTTCAGTGATGGAGTTGGATACAGCTGGATTGATGGTCTAAAAGATCATGCAAACAAACA 1463
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1381 GTTCAGTGATGGAGTTGGATACAGCTGGATTGATGGTCTAAAAGAACATGCGAACAAACA 1440
Query 1464 TGTCTCTGAGACAATGCTGATGAACGCAAGCTTTGTCTTCCCTGATAACACACCTTTGAC 1523
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 TGTCTCTGACACAATGCTGATGAACGCAAGCTTTGTCTTCCCTGATAACACACCTTTGAC 1500
Query 1524 AAAAGAAGCTTACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAGAGTGCTGCTAG 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 AAAAGAAGCTTACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAGAGTGCTGCTAG 1560
Query 1584 AGCAACTGTACCAGGAGGTCCAAGTGTGGCATGTAGCACAGCAAAAGCTGTGGAATGGGA 1643
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1561 AGCAACTGTACCAGGAGGTCCAAGTGTGGCATGTAGTACAGCAAAAGCTGTGGAATGGGA 1620
Query 1644 CGCAGCTTGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTTCATGTTTC 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 CGCAGCTTGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTTCATGTTTC 1680
Query 1704 AGCTTATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGA 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 AGCTTATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGA 1740
Query 1764 GAAGACTCCAGCCATTGTTTGAGGATAAACAA 1795
||||||||||||||||||||||||||||||||
Sbjct 1741 GAAGACTCCAGCCATTGTTTGAGGATAAACAA 1772
> Ahg496723 jgi|Araly1|496723|fgenesh2_kg.8__2539__AT5G65010.2
Length=2049
Score = 1989 bits (1077), Expect = 0.0
Identities = 1503/1708 (88%), Gaps = 32/1708 (2%)
Strand=Plus/Plus
Query 32 TTGCCGCCACCACCACCATGTGTGGGATTCTCGCTG-TGTTAGGCTGCGTCGATAACTCT 90
||||| ||| | ||| ||||||||||||||||||| | || || ||| |||| ||||||
Sbjct 19 TTGCC-ACACTAACACAATGTGTGGGATTCTCGCTGTTCTT-GGTTGCATCGACAACTCT 76
Query 91 CAAGCTAAACGTTCCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGTCCTGAC 150
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 CAAGCTAAACGTTCTCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGTCCTGAT 136
Query 151 TGGAGTGGTCTACATTGTTATGA-GGATTGTTAT-TTGGCTCATGAGCGTTTGGCTATCG 208
|||||||| || ||||||||||| || ||||||| ||| ||||||| ||||| || |||
Sbjct 137 TGGAGTGGACTCCATTGTTATGAAGG-TTGTTATCTTG-CTCATGAACGTTTAGCCATCA 194
Query 209 TTGACCCCACTTCTGGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTCACGG 268
||||||| ||||||||||| ||||| |||||||||||||| |||||| | |||||||| |
Sbjct 195 TTGACCCTACTTCTGGAGACCAACCTCTCTATAACGAAGACAAGACCGTCGCTGTCACTG 254
Query 269 TCAATGGAGAGATTTACAACCACAAGGCTTTGCGTGAAAATTTGAAGTCTCACCAATTCC 328
||||||||||||| |||||||| ||| |||||||||||| | |||||||| |||||||
Sbjct 255 TCAATGGAGAGATATACAACCATAAGATTTTGCGTGAAAAGCTAAAGTCTCATCAATTCC 314
Query 329 GTACTGGGAGTGATTGTGAAGTGATTGCCCATCTTTACGAAGAACATGGAGAGGAATTTG 388
||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 315 GTACTGGTAGTGACTGTGAAGTGATTGCACATCTTTATGAAGAACATGGAGAGGAATTTA 374
Query 389 TCGACATGTTGGATGGCATGTTTGCATTTGTGCTTCTTGATACCCGAGACAAAAGCTTTA 448
|||||||||| ||||| ||||| || ||||| ||||||||||| || |||||||| ||||
Sbjct 375 TCGACATGTTAGATGGAATGTTCGCGTTTGTCCTTCTTGATACTCGCGACAAAAGTTTTA 434
Query 449 TTGCTGCAAGGGATGCCATTGGTATCACTCCACTCTACATCGGGTGGGGTCTCGATGGTT 508
||||||||||||| || ||||||||||||||||| ||||| || |||||||| |||||||
Sbjct 435 TTGCTGCAAGGGACGCGATTGGTATCACTCCACTTTACATTGGATGGGGTCTTGATGGTT 494
Query 509 CTGTTTGGTTTGCTTCCGAGATGAAAGCACTTAGTGATGATTGTGAGCAGTTTATGTGCT 568
|||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
Sbjct 495 CTGTCTGGTTTGCTTCCGAGATGAAAGCTCTTAGTGATGATTGTGAACAGTTTATGT-CT 553
Query 569 TCCCC-CCAGGCCACATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAACCCC 627
| || || ||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 554 TTTCCTCCTGGCCACATCTACTCAAGTAAACAAGGAGGGCTTAGGAGGTGGTACAATCCT 613
Query 628 CCGTGGTTCTCTGAGGTTGTTCCTTCAACCCCATATGATCCCCTAGTGGTGCGCAATACT 687
||||||| ||||||| ||||||||||||||||||||||| |||| |||||||| ||
Sbjct 614 CCGTGGTACTCTGAGCAGGTTCCTTCAACCCCATATGATCCTTTAGTTCTGCGCAATGCT 673
Query 688 TTTGAGAAGGCTGTTA-TAAA-ACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCTAT 745
|| ||||||||||| | |||| | |||| |||||||||||||||||||| || |||||||
Sbjct 674 TTCGAGAAGGCTGT-AGTAAAGA-GACTTATGACTGATGTGCCTTTTGGAGTTCTCCTAT 731
Query 746 CTGGTGGATTAGATTCATCCCTTGTTGCTTCAGTAGCATTACGCCATCTGGAAAAATCAG 805
|||| ||||| || || || ||||||||| ||||||||||||||||| |||||||||| |
Sbjct 732 CTGGAGGATTGGACTCGTCTCTTGTTGCTGCAGTAGCATTACGCCATTTGGAAAAATCGG 791
Query 806 AAGCTGCTTGTCAGTGGGGTTCA-AAGTTGCACACATTTTGTATCGGTTTGAAGGGATCC 864
|||||||| |||| ||||||||| || |||||||| ||||| ||||| ||| |||||||
Sbjct 792 AAGCTGCTCGTCAATGGGGTTCACAA-TTGCACACGTTTTGCATCGGATTGCAGGGATCG 850
Query 865 CCGGATCTTAAAGCTGGCAGAGAAGTCGCTGACTAT-TTAGGAACTCGCCACCACGAGTT 923
|| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 851 CCAGATCTTAAAGCTGGCAGAGAAGTCGCTGACTATCTT-GGAACACGCCACCACGAGTT 909
Query 924 ACACTTTACAGTTCAGGACGGAATAGATGCCATAGAAGAAGTCATCTACCATGTTGAGAC 983
|| ||||| ||||||||||| |||||||| ||||| |||||||| |||||| |||||||
Sbjct 910 TCAGTTTACTGTTCAGGACGGGATAGATGCGATAGAGGAAGTCATTTACCATATTGAGAC 969
Query 984 CTATGATGTGACTACTATTAGAGCCAGCACTCCAATGTTTCTTATGTCGCGAAAAATCAA 1043
|||||| |||||||| || ||||| ||||| ||||||||||||||||| ||||||| ||
Sbjct 970 CTATGACGTGACTACAATAAGAGCTAGCACCCCAATGTTTCTTATGTCAAGAAAAATTAA 1029
Query 1044 ATCGCTT-GGTGTAAAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGAT 1102
||| || ||||||||||||||||||||||||||||| |||||||||||| | || ||||
Sbjct 1030 ATCT-TTAGGTGTAAAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATTCTCGGGGGAT 1088
Query 1103 ATTTGTACTTCCATAAAGCTCCCAACAAGAAGGAATTTCATGAGGAAACATGTCGAAAGA 1162
| |||||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct 1089 ACTTGTACTTCCATAAGGCGCCCAACAAGAAAGAATTTCATGAAGAAACATGCCGAAAGA 1148
Query 1163 TCAAAGCTCTTCATCAATATGACTGCTTGAGGGCTAACAAATCAACTTCTGCATGGGGTG 1222
|||| ||||| || || | ||| || ||||| |||||||||||||||||||| |||||||
Sbjct 1149 TCAAGGCTCTCCACCAGTTTGATTGTTTGAGAGCTAACAAATCAACTTCTGCGTGGGGTG 1208
Query 1223 TTGAGGCTCGTGTACCTTTCCTCGATAAAGAATT-TATAAATGTCGCAATGAGCATCGAT 1281
| || |||||||| |||||||| ||||||||||| | | |||||||||||||||||||||
Sbjct 1209 TCGAAGCTCGTGTGCCTTTCCTAGATAAAGAATTCT-TGAATGTCGCAATGAGCATCGAT 1267
Query 1282 CCAGAGTGGAAGATGATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAAT 1341
||||||||||||||||| | ||||||| | |||||||||||||| |||||| ||||||||
Sbjct 1268 CCAGAGTGGAAGATGATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCTACGCAAT 1327
Query 1342 GCCTTTGATGATGAGAAAA--ATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAG 1399
|||||||||||||| | || | ||||| ||||||||||| ||||| ||||| || ||||
Sbjct 1328 GCCTTTGATGATGA-ACAACGA-CCTTATCTACCAAAGCATATTCTGTATAGACAAAAAG 1385
Query 1400 AACAGTTCAGTGATGGAGTTGGATACAGCTGGATTGATGGTCTAAAAGATCATGCAAACA 1459
||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||
Sbjct 1386 AACAGTTTAGTGATGGAGTTGGGTATAGCTGGATTGATGGTCTGAAAGATCATGCAAACA 1445
Query 1460 AACATGTCTCTGAGACAATGCTGAT-GAACGCAAGCTTTGTCTTCCCTGATAACACACCT 1518
||||||||||||| || |||||| | ||||||||||||||||||||| ||||||||||||
Sbjct 1446 AACATGTCTCTGATACTATGCTG-TCGAACGCAAGCTTTGTCTTCCCCGATAACACACCT 1504
Query 1519 TTGACAAAAGAAGCTTACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAG-AG--T 1575
|||||||||||||||||||||||||||||||||| |||||||||||||||||| || |
Sbjct 1505 CTGACAAAAGAAGCTTACTACTACAGAACCATCTTCGAAAAGTTCTTCCCTAAGCAGAGT 1564
Query 1576 GCTGCTAGAGCAACTGTACCAGGAGGTCCAAGTGTGGCATGTAGCACAGCAAAAGCTGTG 1635
||||| || || || ||||||||||| |||||| | || || || || ||||||||||||
Sbjct 1565 GCTGCAAGGGCGACAGTACCAGGAGGGCCAAGTATAGCTTGCAGTACCGCAAAAGCTGTG 1624
Query 1636 GAATGGGACGC-AGCTTGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGT 1694
|||||||| || | |||||||| |||||||||| || ||||| |||||||||||||||||
Sbjct 1625 GAATGGGATGCTA-CTTGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGGAGT 1683
Query 1695 TCATGTTTCAGCTTATGGGGAAGATAAA 1722
|||||| ||||||||| || ||||||
Sbjct 1684 CCATGTTGCAGCTTATGAAGAGGATAAA 1711
> Ahg350435 jgi|Araly1|350435|fgenesh1_pg.C_scaffold_6001028
Length=1200
Score = 137 bits (74), Expect = 3e-31
Identities = 76/77 (99%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 1709 ATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGAGAAGA 1768
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124 ATGGGGAGGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGAGAAGA 1183
Query 1769 CTCCAGCCATTGTTTGA 1785
|||||||||||||||||
Sbjct 1184 CTCCAGCCATTGTTTGA 1200
Score = 119 bits (64), Expect = 9e-26
Identities = 73/77 (95%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 529 ATGAAAGCACTTAGTGATGATTGTGAGCAGTTTATGTGCTTCCCCCCAGGCCACATCTAT 588
|||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAAGCACTTTGTGATGGTTGTGAACAGTTTATGTGCTTCCCCCCAGGCCACATCTAT 60
Query 589 TCAAGTAAACAAGGTGG 605
||||||||||||| |||
Sbjct 61 TCAAGTAAACAAG-TGG 76
> Ahg893177 jgi|Araly1|893177|Al_scaffold_0006_1173
Length=966
Score = 126 bits (68), Expect = 6e-28
Identities = 70/71 (99%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 1709 ATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGAGAAGA 1768
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 ATGGGGAGGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGAGAAGA 955
Query 1769 CTCCAGCCATT 1779
|||||||||||
Sbjct 956 CTCCAGCCATT 966
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76332850980
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5