BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G10290.1
Length=2206
Score E
Sequences producing significant alignments: (Bits) Value
Ahg940499 jgi|Araly1|940499|scaffold_601043.1 3033 0.0
Ahg918322 jgi|Araly1|918322|Al_scaffold_0008_3073 1733 0.0
> Ahg940499 jgi|Araly1|940499|scaffold_601043.1
Length=1882
Score = 3033 bits (1642), Expect = 0.0
Identities = 1803/1883 (96%), Gaps = 2/1883 (0%)
Strand=Plus/Plus
Query 178 AGCTCAATTAATGAGATGAGATGAGAATGTTCAGCTTGCAGAAGATGGCTATGGCTTTTA 237
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1 AGCTCAATTAATGAGATGAGATGAGAAAGTTCAGCTTGCAGAAGATGGCTATGGCTTTTA 60
Query 238 CTCTCTTGTTTTTTGCCTGTTTATGCTCATTTGTGTCTCCAGATGCTCAAGGGGATGCAC 297
|| | ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 61 CTGTGTTGGTTTTTGCCTCTTTATGCTCATTTGTGTCTCCAGATGCTCAAGGAGATGCAC 120
Query 298 TGTTTGCGTTGAGGATCTCCTTACGTGCATTACCGAATCAGCTAAGTGACTGGAATCAGA 357
| ||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct 121 TATTTGCCTTGAGGATCTCGTTACGTGCATTGCCTAATCAGCTAAGTGACTGGAATCAGA 180
Query 358 ACCAAGTTAATCCTTGCACTTGGTCCCAAGTTATTTGTGATGACAAAAACTTTGTCACTT 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ACCAAGTTAATCCTTGCACTTGGTCCCAAGTTATTTGTGATGACAAAAACTTTGTCACTT 240
Query 418 CTCTTACATTGTCAGATATGAACTTCTCGGGAACCTTGTCTTCAAGAGTAGGAATCCTAG 477
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 241 CTCTTACATTGTCAGACATGAACTTCTCGGGAACCTTGTCTTCAAGAATAGGAATCCTAG 300
Query 478 AAAATCTCAAGACTCTTACTTTAAAGGGAAATGGAATTACGGGTGAAATACCAGAAGACT 537
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 301 AAAATCTCAAGACTCTTACTCTAAAGGGAAATGGAATTACGGGTGAAATACCAGAAGACT 360
Query 538 TTGGAAATCTGACTAGCTTGACTAGTTTGGATTTGGAGGACAATCAGCTAACTGGTCGTA 597
||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 361 TTGGAAACCTGACCAGTTTGACCAGTTTGGATTTGGAGGACAATCAGCTAACTGGTCGTA 420
Query 598 TACCATCCACTATCGGTAATCTCAAGAAACTTCAGTTCTTGACCTTGAGTAGGAACAAAC 657
||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 421 TACCATCCACTATTGGTAATCTCAAGAAGCTCCAGTTCTTGACCTTGAGTAGGAACAAAC 480
Query 658 TTAATGGGACTATTCCGGAGTCACTCACTGGTCTT-CCAAACCTGTTAAACCTGCTGCTT 716
||||||||||||| ||| |||||||||| ||| || |||||||||||||| |||||||||
Sbjct 481 TTAATGGGACTATCCCGCAGTCACTCACGGGT-TTACCAAACCTGTTAAATCTGCTGCTT 539
Query 717 GATTCCAATAGTCTCAGTGGTCAGATTCCTCAAAGTCTGTTTGAGATCCCAAAATATAAT 776
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 540 GATTCCAATAGTCTCAGTGGTCAGATTCCTCAAAGTCTGTTTGAGATTCCAAAATACAAT 599
Query 777 TTCACGTCAAACAACTTGAATTGTGGCGGTCGTCAACCTCACCCTTGTGTATCCGCGGTT 836
|||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 600 TTCACGGCAAACAACTTGACTTGTGGCGGTGGTCAACCTCACCCTTGTGTATCCGCGGTC 659
Query 837 GCCCATTCAGGTGATTCAAGCAAGCCTAAAACTGGCATTATTGCTGGAGTTGTTGCTGGA 896
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 660 GCCCATTCAGGTGATTCAAGCAAGCCAAAAACTGGCATTATTGCTGGAGTTGTTGCCGGA 719
Query 897 GTTACAGTTGTTCTCTTTGGAATCTTGTTGTTTCTGTTCTGCAAGGATAGGCATAAAGGA 956
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 GTTACAGTTATTCTCTTTGGAATCTTGTTGTTTCTGTTCTGCAAGGATAGGCATAAAGGA 779
Query 957 TATAGACGTGATGTGTTTGTGGATGTTGCAGGTGAAGTGGACAGGAGAATTGCATTTGGA 1016
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TATAGACGTGATGTATTCGTGGATGTTGCAGGTGAAGTGGACAGGAGAATTGCATTTGGG 839
Query 1017 CAGTTGAAAAGGTTTGCATGGAGAGAGCTCCAGTTAGCGACAGATAACTTCAGCGAAAAG 1076
||||||||||| ||||||||||||||||| || || || |||||||||||||||||||||
Sbjct 840 CAGTTGAAAAGATTTGCATGGAGAGAGCTTCAATTGGCTACAGATAACTTCAGCGAAAAG 899
Query 1077 AATGTACTTGGTCAAGGAGGCTTTGGGAAAGTTTACAAAGGAGTGCTTCCGGATAACACC 1136
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 AATGTACTAGGTCAAGGAGGCTTTGGGAAAGTTTACAAAGGAGTGCTTCCGGATAACACC 959
Query 1137 AAAGTTGCTGTGAAGAGATTGACGGATTTCGAAAGTCCTGGTGGAGATGCTGCTTTCCAA 1196
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 AAAGTTGCTGTGAAGAGATTGACGGATTTCGAAAGTCCTGGTGGAGATGCTGCTTTCCAG 1019
Query 1197 AGGGAAGTAGAGATGATAAGTGTAGCTGTTCATAGGAATCTACTCCGTCTTATCGGGTTC 1256
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1020 AGGGAAGTTGAGATGATAAGTGTAGCTGTTCATAGGAATCTACTGCGTCTTATCGGTTTC 1079
Query 1257 TGCACCACACAAACAGAACGCCTTTTGGTTTATCCCTTCATGCAGAATCTAAGTCTTGCA 1316
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 TGCACCACGCAAACAGAACGCCTTTTGGTTTATCCCTTCATGCAGAATCTAAGTCTTGCA 1139
Query 1317 CATCGTCTGAGAGAGATCAAAGCAGGCGACCCGGTTCTAGATTGGGAGACGAGGAAACGG 1376
||||| || |||||||| ||||| ||||| |||||||| |||||||||||||||||||||
Sbjct 1140 CATCGACTCAGAGAGATTAAAGCGGGCGATCCGGTTCTGGATTGGGAGACGAGGAAACGG 1199
Query 1377 ATTGCCTTAGGAGCAGCGCGTGGTTTTGAGTATCTTCATGAACATTGCAATCCGAAGATC 1436
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1200 ATTGCCTTAGGAGCAGCGCGTGGTTTTGAGTATCTTCACGAACATTGCAATCCGAAGATC 1259
Query 1437 ATACATCGTGATGTGAAAGCAGCTAATGTGTTACTAGATGAAGATTTTGAAGCAGTGGTT 1496
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1260 ATACATCGCGATGTGAAAGCAGCTAACGTGTTACTTGATGAAGATTTTGAAGCAGTGGTT 1319
Query 1497 GGTGATTTTGGTTTAGCCAAGCTAGTAGATGTTAGAAGGACTAATGTGACTACTCAAGTT 1556
|||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1320 GGTGATTTCGGTTTAGCCAAGTTAGTAGATGTTAGAAGGACTAATGTGACAACTCAAGTT 1379
Query 1557 CGAGGAACAATGGGTCACATTGCACCAGAATATTTATCAACAGGGAAATCATCAGAGAGA 1616
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1380 CGAGGAACAATGGGTCACATTGCACCAGAATATCTATCAACAGGGAAATCATCAGAGAGA 1439
Query 1617 ACCGATGTTTTCGGGTATGGAATTATGCTTCTTGAGCTTGTTACAGGACAACGCGCAATA 1676
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1440 ACCGATGTTTTCGGGTATGGAATTATGCTTCTTGAGCTCGTTACAGGACAACGCGCGATA 1499
Query 1677 GACTTTTCACGTTTGGAGGAAGAAGATGATGTCTTGTTACTTGACCACGTGAAGAAACTG 1736
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1500 GACTTTTCGCGTTTGGAAGAAGAAGATGATGTCTTGTTACTTGACCACGTAAAGAAACTG 1559
Query 1737 GAAAGAGAGAAGAGATTAGGAGCAATCGTAGATAAGAATTTGGATGGAGAGTATATAAAA 1796
||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1560 GAAAGAGAGAAGAGATTGGGAGCAATTGTAGATAAAAATTTGGATGGAGAGTATATAAAA 1619
Query 1797 GAAGAAGTAGAGATGATGATACAAGTGGCTTTGCTTTGTACACAAGGTTCACCAGAAGAC 1856
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1620 GAAGAAGTAGAGATGATGATACAAGTGGCTTTGCTTTGCACACAAGGTTCACCGGAAGAC 1679
Query 1857 CGACCAGTGATGTCTGAAGTTGTGAGGATGTTAGAAGGAGAAGGGCTTGCGGAGAGATGG 1916
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1680 CGACCAGTGATGTCGGAAGTTGTAAGGATGTTAGAAGGAGAAGGGCTTGCGGAGAGATGG 1739
Query 1917 GAAGAGTGGCAAAACGTGGAAGTCACGAGACGTCATGAGTTTGAACGGTTGCAGAGGAGA 1976
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1740 GAAGAGTGGCAAAACGTGGAAGTCACGAGACGTCATGAGTTCGAACGGTTGCAGAGGAGA 1799
Query 1977 TTTGATTGGGGTGAAGATTCTATGCATAACCAAGATGCCATTGAATTATCTGGTGGAAGA 2036
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1800 TTTGATTGGGGTGAAGATTCTATGCATAACCAAGATGCTATTGAATTATCAGGTGGAAGA 1859
Query 2037 TGACCAAAAACATCAAACCTTGA 2059
||||||||||||||||| |||||
Sbjct 1860 TGACCAAAAACATCAAATCTTGA 1882
> Ahg918322 jgi|Araly1|918322|Al_scaffold_0008_3073
Length=1824
Score = 1733 bits (938), Expect = 0.0
Identities = 1526/1808 (84%), Gaps = 47/1808 (3%)
Strand=Plus/Plus
Query 255 TGTTTATGCTCATTTGTGTCTCCAGATG-CTCAAGGGGATGCACTGTTTGCGTTGAGGAT 313
|||||||| |||| |||||| ||||||| | |||||||||||||| |||||||| ||||
Sbjct 37 TGTTTATGGTCATCTGTGTCACCAGATGAC-CAAGGGGATGCACTATTTGCGTTAAGGAG 95
Query 314 CTCCTTACGTGCAT-TACC-GAATCAGCTAAGTGACTGGAATCAGAACCAAGTTAATCCT 371
||| |||||||||| | || ||| ||||| ||||| ||||| ||||| ||||| |||||
Sbjct 96 CTCGTTACGTGCATCT-CCTGAA-CAGCTTAGTGATTGGAACCAGAATCAAGTCGATCCT 153
Query 372 TGCACTTGGTCCCAAGTTATTTGTGATGACAA-AAACTTTGTCACTTCTCTTACATTGTC 430
|| |||||||| |||||||||||||||||||| |||| ||| |||||| | || |||||
Sbjct 154 TGTACTTGGTCTCAAGTTATTTGTGATGACAAGAAAC-ATGTTACTTCTATAACTTTGTC 212
Query 431 AGATATGAAC-T-T-CTCGGGAACCTTGTCTTCAAGAGTAGGAATCCTAGA-AAATCTCA 486
| | |||||| | | ||||||||||||||||||| || ||||||| || || || |||||
Sbjct 213 ATACATGAACTTCTCCTCGGGAACCTTGTCTTCAGGAATAGGAAT-CTTGACAACTCTCA 271
Query 487 AGACTCTTACTTTAAAGGGAAATGGAATTACGGGTGAAATACCAGAAGACTTTGGAAATC 546
|||||||||| || ||||||||||||||||| |||| |||||||||| | ||||||||
Sbjct 272 AGACTCTTACATTGAAGGGAAATGGAATTACTGGTGGAATACCAGAATCCATTGGAAATT 331
Query 547 TGACTAGCTTGACTAGTTTGGATTTGGAGGACAATCAGCTAACTGGTCGTATACCATCCA 606
|| ||||||||||||| || ||||||||||| |||| | |||||||||| ||||||||||
Sbjct 332 TGTCTAGCTTGACTAGCTTAGATTTGGAGGATAATCGGTTAACTGGTCGCATACCATCCA 391
Query 607 CTATCGGTAATCTCAAGAAACTTCAGTTCTTGACCTTGAGTAGGAACAAACTTAATGGGA 666
|| | |||||||| ||||| || ||||||||||||||||||||||| || |||||||| |
Sbjct 392 CTCTTGGTAATCTTAAGAATCTCCAGTTCTTGACCTTGAGTAGGAATAACCTTAATGGTA 451
Query 667 CTATTCCGGAGTCACTCACTGGTCT-TCCAAACCTGTTAAACCTGCTGCTTGATTCCAAT 725
|||| ||||| ||||| || ||| | | |||| ||| |||| | ||||| || || |||
Sbjct 452 CTATCCCGGATTCACTTACGGGTATAT-CAAAACTGATAAATATTCTGCTCGACTCAAAT 510
Query 726 AGTCTCAGTGGTCAGATTCCTCAAAGTCTGTTTGAGATCCCAAAATATAATTTCAC-GTC 784
| ||| |||||| |||| ||||| ||| | || | || |||||||| |||||||| | |
Sbjct 511 AATCTTAGTGGTGAGATCCCTCAGAGTTTATTCAAAATTCCAAAATACAATTTCACAG-C 569
Query 785 AAACAACTTGAATTGTGGCGGTCGTC-AA-CCTCACCCTTGTGTATCCGCGGTTGCC--- 839
||||||||||| |||||| || | | || ||||| ||||||||| | | | | ||
Sbjct 570 AAACAACTTGAGTTGTGGTGG-C-ACTAACCCTCAACCTTGTGTAACTG-TG-T-CCAAT 624
Query 840 CATTCAGGTGATTCAAGCAAG-CCTAAAACTGGCATTATTGCTGGAGTTGTT-GCTGGAG 897
| |||||||||||||||| || |||||||| ||||| |||||||||||| || ||||
Sbjct 625 CCTTCAGGTGATTCAAGC-AGTAGAAAAACTGGAATTATCGCTGGAGTTGTTAGC-GGAG 682
Query 898 TTACAGTTGTTCTCTTTGGAATCTTGTTGTTTCTGTTCTGCAAGGATAGGCATAAAGGAT 957
| ||||| ||||| ||||| |||| || ||| | |||||||||||| |||||||||||
Sbjct 683 TCGCAGTTATTCTCCTTGGATTCTTCTTCTTTTTCCTCTGCAAGGATAAGCATAAAGGAT 742
Query 958 ATAGACGTGA-TGTGTTTGTGGATGTTGCAGGTGAAGTGGACAGGAGAATTGCATTTGGA 1016
||| ||| || | ||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct 743 ATAAACGCGACT-TGTTTGTGGATGTTGCAGGTGAAGTGGACAGAAGGATTGCGTTTGGA 801
Query 1017 CAGTTGAAAAGGTTTGCATGGAGAGAGCTCCAGTTAGCGACAGATAACTTCAGCGAAAAG 1076
||||||| ||| | ||||||||||||||| || || || |||||| | ||||||||||||
Sbjct 802 CAGTTGAGAAGATATGCATGGAGAGAGCTTCAATTGGCTACAGATGAGTTCAGCGAAAAG 861
Query 1077 AATGTACTTGGTCAAGGAGGCTTTGGGAAAGTTTACAAAGGAGTGCTTCCGGATAACACC 1136
|| || || || |||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct 862 AACGTTCTCGGACAAGGAGGCTTTGGGAAAGTTTACAAAGGATTGCTTTTGGATGGCACG 921
Query 1137 AAAGTTGCTGTGAAGAGATTGACGGATTTCGAAAGTCCTGGTGGAGATGCTGCTTTCCAA 1196
||||| |||||||| |||||||| ||||| || |||| || ||||||| ||||||||
Sbjct 922 AAAGTCGCTGTGAAAAGATTGACTGATTTTGAGCGTCCAGGAGGAGATGAAGCTTTCCAG 981
Query 1197 AGGGAAGTAGAGATGATAAGTGTAGCTGTTCATAGGAATCTACTCCGTCTTATCGGGTTC 1256
|| ||||| |||||||||||||||||||||||||||||||| || || |||||||| ||
Sbjct 982 AGAGAAGTTGAGATGATAAGTGTAGCTGTTCATAGGAATCTGCTTCGCCTTATCGGCTTT 1041
Query 1257 TGCACCACACAAACAGAACGCCTTTTGGTTTATCCCTTCATGCAGAATCTAAGTCTTGCA 1316
|| || || ||||| |||||||||||||| ||||| |||||||||||||||||| |||||
Sbjct 1042 TGTACAACGCAAACCGAACGCCTTTTGGTGTATCCTTTCATGCAGAATCTAAGTGTTGCA 1101
Query 1317 CATCGTCTGAGAGAGATCAAAGCAGGCGACCCGGTTCTAGATTGGGAGACGAGGAAACGG 1376
|| || | |||||||| ||| | ||||| || |||| |||||| | |||||||| |
Sbjct 1102 TATTGTTTAAGAGAGATTAAACCCGGCGATCCAATTCTGGATTGGTTCAGGAGGAAACAG 1161
Query 1377 ATTGCCTTAGGAGCAGCGCGTGGTTTTGAGTATCTTCATGAACATTGCAATCCGAAGATC 1436
||||| ||||| ||||| || || | || |||||||||||||||||||| |||||||||
Sbjct 1162 ATTGCGTTAGGCGCAGCTCGAGGACTCGAATATCTTCATGAACATTGCAACCCGAAGATC 1221
Query 1437 ATACATCGTGATGTGAAAGCAGCTAATGTGTTACTAGATGAAGATTTTGAAGCAGTGGTT 1496
||||| || ||||||||||| || |||||||||||||||||||| |||||||||||||||
Sbjct 1222 ATACACCGAGATGTGAAAGCTGCAAATGTGTTACTAGATGAAGACTTTGAAGCAGTGGTT 1281
Query 1497 GGTGATTTTGGTTTAGCCAAGCTAGTAGATGTTAGAAGGACTAATGTGACTACTCAAGTT 1556
||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||
Sbjct 1282 GGTGATTTTGGTTTAGCCAAGTTGGTAGATGTTAGAAGGACTAATGTGACCACTCAGGTC 1341
Query 1557 CGAGGAACAATGGGTCACATTGCACCAGAATATTTATCAACAGGGAAATCATCAGAGAGA 1616
||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| |
Sbjct 1342 CGAGGAACAATGGGTCACATTGCACCAGAATGTATATCCACAGGGAAATCATCAGAGAAA 1401
Query 1617 ACCGATGTTTTCGGGTATGGAATTATGCTTCTTGAGCTTGTTACAGGACAACGCGCAATA 1676
|| || ||||||||||| |||||||||||||| |||||||| || |||||| | |||||
Sbjct 1402 ACTGACGTTTTCGGGTACGGAATTATGCTTCTGGAGCTTGTAACTGGACAAAGAGCAATT 1461
Query 1677 GACTTT-TCACGTTTGGAGGAAGAAGATGATGTCTTGTTACTTGACCACGTGAAGAAACT 1735
|| ||| || || || |||||||||||||||||||| || || ||||| |||||||||||
Sbjct 1462 GA-TTTCTCGCGGTTAGAGGAAGAAGATGATGTCTTATTGCTAGACCATGTGAAGAAACT 1520
Query 1736 GGAAAGAGAGAAGAGATTAGGAG-CAATCGTAGATAAGAAT-TTGGATGGAG-AGTATAT 1792
||||||||||||||||||||||| || | ||||||||||| |||| || || | |||||
Sbjct 1521 GGAAAGAGAGAAGAGATTAGGAGACATT-GTAGATAAGAAGCTTGG-TG-AGGATTATAT 1577
Query 1793 AAAAGAAGAAGTAGAGATGATGATACAAGTGGCTTTGCTTTGTACACAAGGTTCACCAGA 1852
|||||||||||| || |||||||||||||| ||| |||| || ||||||| |||| ||
Sbjct 1578 AAAAGAAGAAGTTGAAATGATGATACAAGTAGCTCTGCTATGCACACAAGCAGCACCGGA 1637
Query 1853 AGACCGACCAGTGATGTCTGAAGTTGTGAGGATG-TTAGAAGGAGAAGGGCTTGCGGAGA 1911
||| ||||||| |||||| ||||| || || ||| || ||||||||||||||||| ||||
Sbjct 1638 AGAACGACCAGCGATGTCGGAAGTAGTTAGAATGCTT-GAAGGAGAAGGGCTTGCAGAGA 1696
Query 1912 GATGGGAAGAGTGGCAAAA-CGTGGAAGTCACGAGACGTCATGAGTTTGA-ACGGTTGCA 1969
|||||||||| ||||| || | || |||| ||||||| | |||||| | | |||||||
Sbjct 1697 GATGGGAAGAATGGCAGAATCTTG-AAGTGACGAGACAAGAAGAGTTTCAGA-GGTTGCA 1754
Query 1970 GAGGAGATTTGATTGGGGTGAAGATTCTATGCATAACCAAGATGCCATTGAATTATCTGG 2029
||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||
Sbjct 1755 GAGGAGATTTGATTGGGGTGAAGATTCCATGAATAATCAAGATGCCATAGAATTATCTGG 1814
Query 2030 TGGAAGAT 2037
||||||||
Sbjct 1815 TGGAAGAT 1822
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83036734100
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5