BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G10540.1
Length=2852
Score E
Sequences producing significant alignments: (Bits) Value
Ahg487887 jgi|Araly1|487887|fgenesh2_kg.6__1021__AT5G10540.1 4372 0.0
Ahg951411 jgi|Araly1|951411|scaffold_803298.1 2490 0.0
Ahg497269 jgi|Araly1|497269|fgenesh2_kg.112__1__AT5G65620.1 1279 0.0
> Ahg487887 jgi|Araly1|487887|fgenesh2_kg.6__1021__AT5G10540.1
Length=2826
Score = 4372 bits (2367), Expect = 0.0
Identities = 2713/2867 (95%), Gaps = 76/2867 (3%)
Strand=Plus/Plus
Query 10 TCCACTACCGCCGCTTCTCATTCTCTTTCTCGTCAATCTCAATCAATGGCTTCTGAAGAT 69
||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct 1 TCCACTACCGCCGCTTCTCATTCTCTTCCTCGTCAATCTCCATCAATGGCTTCTCAAGAT 60
Query 70 ACTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCCGTTGAT 129
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 61 TCTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCTGTTGAT 120
Query 130 GCTCACCATGTCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGAG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTCACCATGTCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGAG 180
Query 190 CAGCTAGAAAAAGCTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGATT 249
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CAGCTAGAAAAAACTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGATT 240
Query 250 ATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACACA 309
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACACG 300
Query 310 CCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCGGAGAAGGTGAAGTTCCAGCTCAGG 369
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 301 CCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCAGAGAAGGTGAAGTACCAGCTCAGG 360
Query 370 TTGGGACAGAGCAAACCCATTTACAATGCATTTAAGGCTATTCGAGAATCTCCAGACTGG 429
||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct 361 TTGGGACAGAGCAAACCCATTTACAATGCATTTAAAGCTATTCGAGAATCGCCTGACTGG 420
Query 430 AATTCATTGAGCGAAGCTCGTCAACGATTAGTTGAAGCCCAAATAAAGGAGGCGGTTCTG 489
|| ||| ||| ||||| | || | | ||||||||||||||||||||
Sbjct 421 AAATCACTGACCGAAG--C-TC--C-----------G--CAAATAAAGGAGGCGGTTCTC 462
Query 490 AGTGGTATTGCTCTTGAAGATGATAAGAGGGAAGAATTTAACAAAATTGAACAGGAACTT 549
|||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 463 AGTGGTATTGCTCTTGAAGACGACAAGAGAGAAGAATTTAACAAAATTGAACAGGAACTT 522
Query 550 GAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAGTTTGAAAAG 609
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 523 GAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAATTTGAAAAG 582
Query 610 TTGATAACAGACAAGAAAGAGATTGAGGGGTTGCCACCATCTGCACTTGGATTGTTCGCA 669
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 583 TTGATAACAGACAAGAAAGAGATCGAGGGGTTGCCGCCATCTGCACTTGGATTGTTCGCA 642
Query 670 CAAGCAGCTGTTTCCAAGGGCCATGAAACTGCAACTGCTGACACTGGACCATGGCTCATT 729
|||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 643 CAAGCAGCTGCTTCCAAGGGACATGAAAATGCAACTGCTGACACTGGACCATGGCTCATT 702
Query 730 ACACTCGATGCTCCTAGTTATCTTCCCGTTATGCAACATGCCAAAAACCGAGCTCTGCGC 789
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 703 ACACTCGATGCTCCTAGTTATCTTCCCGTCATGCAACATGCCAAAAACCGAGCTCTGCGC 762
Query 790 GAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAGCA 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 763 GAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAGCA 822
Query 850 ATTATCGACCAAATCTTGAAGCTTCGACTGGAAAAGGCTAAGCTTCTTGGTTACAGAAAT 909
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 823 ATTATCGACCAAATCTTGAAGCTTCGATTGGAAAAGGCTAAGCATCTTGGTTACAGAAAT 882
Query 910 TATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTGGAGAAAGCAGATGAGCTACTA 969
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 883 TATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTAGAGAAAGCAGATGAGCTACTA 942
Query 970 GAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAAGAGT 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 943 GAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAAGAGT 1002
Query 1030 TTTGCGAAGAACCAAGGTGCTGCAGAGGCTGACAGTTTGACTCACTGGGACATCACTTTC 1089
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1003 TTTGCAAAGAACCAAGGTGCTGCAGAAGCTGACAGTTTGACTCACTGGGACATCACTTTC 1062
Query 1090 TGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACCTTAC 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1063 TGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACCTTAC 1122
Query 1150 TTCTCATTGCCAAAGGTTATGGATGCGTTATTCGGTCTAGCTAAGACACTATTTGGAATT 1209
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1123 TTCTCACTGCCAAAGGTTATGGATGCATTATTCGGTCTAGCTAAGACACTATTTGGAATT 1182
Query 1210 GATGTTGTGCCAGCAGACGGTGTAGCGCCGGTCTGGAACAGCGATGTTAGGTTCTACTGT 1269
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1183 GATGTTGTGCCAGCAGATGGTGTAGCTCCGGTCTGGAACAGCGATGTTAGGTTCTACTGT 1242
Query 1270 GTCAAAGATTCTTCTGGAAATCCAACTGCTTATTTCTACTTTGATCCCTACTCTCGCCCT 1329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1243 GTCAAAGATTCTTCTGGAAATCCAACTGCTTATTTCTACTTTGATCCCTACTCTCGTCCT 1302
Query 1330 TCAGAAAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAGTCATGGCC 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1303 TCAGAAAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAGTCATGGCC 1362
Query 1390 CAGAAGGGTTCCTCCGTTAGACTCCCTGTTGCTCAAATGGTCTGCAACCAAACTCCACCT 1449
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1363 CAGAAGGGTTCCTCCGTTAGGCTCCCTGTTGCTCAAATGGTCTGCAACCAAACTCCACCA 1422
Query 1450 GTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCCATGAATTT 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1423 GTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCCATGAATTT 1482
Query 1510 GGCCATGCTCTTCAGCATATGCTTACCAAAGAGGATGAGGGGCTAGTGGCTGGTATCCGG 1569
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1483 GGCCATGCTCTTCAGCATATGCTTACCAAAGAAGATGAGGGGCTAGTGGCTGGTATCCGA 1542
Query 1570 AATATCGAGTGGGATGCAGTTGAATTACCGTCACAGTTTATGGAGAACTGGTGCTACCAC 1629
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1543 AATATCGAGTGGGATGCAGTTGAATTACCTTCACAGTTTATGGAGAACTGGTGCTACCAC 1602
Query 1630 AGGGATACCTTAATGAGCATTGCTAAGCATTATCAAACAGGAGAAACTCTTCCCGAGAAT 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1603 AGGGATACCTTAATGAGCATTGCTAAGCATTATCAAACAGGAGAAACTCTTCCCGAGAAT 1662
Query 1690 GTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTTAGTCTTCGCCAG 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1663 GTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTTAGTCTTCGCCAG 1722
Query 1750 TTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCAGGTGGGGCAGAG 1809
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1723 TTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCAGGTGGGACAGAG 1782
Query 1810 ACCATCTACGAAGTTGATCAAAGGGTGTCCATAAAAACACAAGTGATCCCTCCACTTCCT 1869
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1783 ACCATCTACGATGTTGATCAAAGGGTGTCCATAAAAACACAAGTGATCCCTCCACTTCCT 1842
Query 1870 GAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTTATGCAGCTGGATAC 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 GAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTTATGCAGCTGGATAC 1902
Query 1930 TACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAGCTTTTGAAGATGCT 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1903 TACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAGCTTTTGAAGATGCT 1962
Query 1990 GGGTTGGATGACATTAAGGCTGTCAAAGAAACAGGACAGAGATTCAGAAACACTATACTT 2049
|||||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||
Sbjct 1963 GGGTTGGATGACATCAAGGCTGTTAAAGAAACAGGACAAAGATTCAGAAACACAATACTC 2022
Query 2050 GCTCTGGGAGGAGGAAAAGCTCCTCTAAAAGTGTTTGTGGAGTTCAGAGGACGAGAACCT 2109
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2023 GCTCTGGGAGGAGGAAAAGCACCTCTAAAAGTGTTTGTGGAGTTCAGAGGACGAGAACCT 2082
Query 2110 TCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCTGCTTGAA--CT--AA 2165
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2083 TCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCTGCTTGAAGTCTTGAA 2142
Query 2166 -T--TA-TGTCCTTTGCTACTCTCACACTCAACTTTGGGTTTATTAATGTCATTAAATAA 2221
| || |||||||||||||||||||||||||||||||| |||||||||||||| ||| |
Sbjct 2143 CTAATAATGTCCTTTGCTACTCTCACACTCAACTTTGGGATTATTAATGTCATTCAATGA 2202
Query 2222 AATTAAACTTTTTC-CTTGCTTGTTTC-CTGAGCATGCTTTCTTCAAGTGTTGTAGTAAT 2279
||||||||||||| |||||||||| | |||||||||||| | |||| |||||||||
Sbjct 2203 AATTAAACTTTTTTACTTGCTTGTT-CACTGAGCATGCTT-C---AAGTATTGTAGTAAA 2257
Query 2280 CATCTCATAGAAGTGCAGCT-GGTaaaaaaaaaaaTGGTTCATAAACGAAACGAACAGAG 2338
||||||| ||| ||||| || ||||| |||| || |||||||| ||||||||||||| ||
Sbjct 2258 CATCTCAGAGATGTGCAACTTGGTAACAAAATAA-TGGTTCATGAACGAAACGAACAAAG 2316
Query 2339 ATAATA-TTTTTCTTCGAACCATTTTCACATTCTCCACTACATTTTTCTTAGAT-CCTCT 2396
|||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||
Sbjct 2317 ATAATACTTTTTCTTCGAACCATTTTCACATTCTCCACTACATATTTCTTC-ATTCCTCT 2375
Query 2397 CGATCTTTTCTT--ACTAAGTCACTCT---------GTTCATGGTGTCACCAATAATCTA 2445
| |||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 2376 CAATCTTTTCTTTTACTAAGTCACTCTCAACCCTCTGTTCATGGTGTCACCAATAATCTA 2435
Query 2446 AA-GAAC-------C-TTAATCTGAAAGAGGAAAAGGACAGAAAACTTCCACCTCTTTGC 2496
|| |||| | |||||||||||||||||||||| | |||||||||||| ||
Sbjct 2436 AAAGAACTAAAGAACCTTAATCTGAAAGAGGAAAAGGA-ACT---CTTCCACCTCTT-GC 2490
Query 2497 TCAACCTAGAAATTCACTAACTACCCTTTACATGTTTTCCTCTATCTACTGTTTCCCTAA 2556
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2491 TCAACCTAGAAATTCTCTAACTACCCTTTACATTTTTTCCTCTATCTACTGTTTCCCTAA 2550
Query 2557 CACTCAAAATCTTTTCTTTCGAGTTTCCCTTCCTTCCTTTCCCTTCCATTTACACA-AAG 2615
|||||||||||||||||||||||||||||||||| | ||||| | |||| |||
Sbjct 2551 AACTCAAAATCTTTTCTTTCGAGTTTCCCTTCCTT--T--CCCTT---T--ACACCGAAG 2601
Query 2616 GTTCCACCTCCACCCAAATTCTCCGATTCTAGTCTCCTGGAGTTGTTAAGCATATTTCAA 2675
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 2602 -TTCCACCTCCGCCCAAATTCTCCGATTCTAGTCTCCTGGAGTTGTTATGCATATATCAA 2660
Query 2676 CGTACGGTCAACAATTATTACGGGGCTTCTTTTGCTTCCACAAATGGAGACTGCACACTA 2735
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2661 CGTACGGTCAACAGTTATTACGGGGCTTCTTTTGCTTCCACAAATGGAGATTGCACACTA 2720
Query 2736 TCCGCATCCGAATCACTTCCTGATGAACTCCCTGACTCTGAATCTGCATAGAGTGCCATA 2795
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2721 TCCGCATCCGAATCACTTCCTGATGAACTCCCTGACTCCGAATCTGCATAGAGTGCCATA 2780
Query 2796 CAAAACTCGAAGGGCACAAGATCATTTCAGAGGGATATGA-TCTCTT 2841
||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 2781 CAAAAATCGAAGGGCACAAGATCATTTCAGAGGGATA-GAATCTCTT 2826
> Ahg951411 jgi|Araly1|951411|scaffold_803298.1
Length=2415
Score = 2490 bits (1348), Expect = 0.0
Identities = 1860/2107 (88%), Gaps = 36/2107 (2%)
Strand=Plus/Plus
Query 70 ACTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCCGTTGAT 129
||||| |||||||||||||| |||||| | || || |||||||||||||| |||||||||
Sbjct 298 ACTCTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGAT 357
Query 130 GCTCA-CCATG-TCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGG 187
|| || |||| || | ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 358 GC-CAGTCATGTTC-GTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGG 415
Query 188 AGCAGCTAGAAAAAGCTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGA 247
|| ||||||| ||| |||| ||||| || |||||||| || || || ||||||||||| |
Sbjct 416 AGGAGCTAGAGAAATCTGTGGAGCCATCGTGGCCAAATCTGGTTGAACCATTAGAGAAAA 475
Query 248 TTATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACA 307
| ||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 476 TCGTTGATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAAGCTGTTAAGGACA 535
Query 308 CACCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCGGAGAAGGTGAAGTTCCAGCTCA 367
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 536 CACCTGAGCTTCGTGCTGCCATTGAAGACGTTCAGCCAGAGAAGGTGAAGTTCCAGCTCA 595
Query 368 GGTTGGGACAGAGCAAACCCATTTACAATGCATTTAAGGCTATTCGAGAATCTCCAGACT 427
| |||||||| ||||| || ||||||||||| ||||| |||||||| |||||||| || |
Sbjct 596 GATTGGGACAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATT 655
Query 428 GG-AATTCAT-TGAGCGAAGCTCGTCAACGATTAGTTGAAGCCCAAATAAAGGAGGCGGT 485
|| | || | | || |||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct 656 GGTCA-TC-TCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATTAAGGAGGCGGT 713
Query 486 TCTGAGT-GGTATTGCTCTTGAAGATGATAAGAGGGAAGAATTTAACAAAATTGAACAGG 544
||| | | |||||||||||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 714 TCTCA-TAGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAACAAAATTGAACAGG 772
Query 545 AACTTGAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAGTTTG 604
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 773 AACTCGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCTACAAAGAAATTTG 832
Query 605 AAAAGTTGATAACAGACAAGAAAGAGATTGAGGGGTTGCCACCATCTGCACTTGGATTGT 664
|||||||||| ||||||||||||||||| ||||| ||||| |||||||| || || | |
Sbjct 833 AAAAGTTGATTACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTCGGGCTAT 892
Query 665 TCGCACAAGCAGCTGTTTCCAAGGGCCATGAAACTGCAACTGCTGACACTGGACCATGGC 724
|||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||
Sbjct 893 TCGCACAAGCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGA 952
Query 725 TCATTACACTCGATGCTCCTAGTTATCTTCCCGTTATGCAACATGCCAAAAACCGAGCTC 784
|||||||||| |||||||||||||||||||| || ||||||||||| || ||||| ||||
Sbjct 953 TCATTACACTAGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAGAACCGTGCTC 1012
Query 785 TGCGCGAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATA 844
|||| |||||||| |||||||||||| |||| ||||||||||| || ||||| |||||||
Sbjct 1013 TGCGTGAGGAAGTTTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATA 1072
Query 845 CAGCAATTATCGACCAAATCTTGAAGCTTCGAC-TGGAAAAGGCTAAGCTTCTTGGTTAC 903
|||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||
Sbjct 1073 CAGCAATTATCGACCAGATCTTGAAGCTTCG-CTTGGAAAAAGCTAAGCTTCTTGGTTAC 1131
Query 904 AGA-AATTATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTGGAGAAAGCAG-ATG 961
| | ||||| ||||||||||||||||| | ||||||||||||||| |||||||||| | |
Sbjct 1132 A-ACAATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCA-G 1189
Query 962 AGCTACTAGAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACC 1021
|||| |||| |||||| | ||||| || |||||| |||||||||||||||| |||||||
Sbjct 1190 AGCTTTTAGAGAAGCTTTGTAGTGCATCTTGGGATGCGGCTGTTCAAGACATGGAAGACC 1249
Query 1022 TTAAGAGTTTTGCGAAGAACCAAGGTGCTGCAGAGGCTGACAGTTTGACTCACTGGGACA 1081
| |||||||| || ||| |||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 1250 TCAAGAGTTTCGCAAAGGACCAGGGTGCAGCAGAATCTGACAGTTTGACTCACTGGGACA 1309
Query 1082 TCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGC 1141
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1310 CCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATATGATATTAATGAGGAAGAACTAC 1369
Query 1142 GACCTTACTTCTCATTGCCAAAGGTTATGGAT-G-CGTTATTCGGTCTAGCTAAGACACT 1199
| || ||||||||| | ||||||||||||||| | | || ||| ||||||||||||||||
Sbjct 1370 GTCCATACTTCTCACTACCAAAGGTTATGGATGGAC-TT-TTCAGTCTAGCTAAGACACT 1427
Query 1200 ATTTGGAATTGATGTTGTGCCAGCAGACGGTGTAGCGCCGGTCTGGAACAGCGATGTTAG 1259
||||||||||||| ||| |||||||| ||| |||| ||||||||||||| ||||||| |
Sbjct 1428 ATTTGGAATTGATATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAACGATGTTCG 1487
Query 1260 GTTCTACTGTGTCAAAGATTCTTCTGGAAATCCAACT-GCTTA-TTTCTACTTTGATCCC 1317
||||||| | ||||||||||||||||| || |||| | ||||| ||| |||||||||||
Sbjct 1488 GTTCTACCGCGTCAAAGATTCTTCTGGGAACCCAA-TCGCTTACTTT-TACTTTGATCCA 1545
Query 1318 TACTCTCGCCCTTCAGA-AAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAG 1376
||||||||||||||||| ||| |||| ||||||||||||||||| ||| |||| |||||
Sbjct 1546 TACTCTCGCCCTTCAGAGAAA-AGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAG 1604
Query 1377 CCGAGTCATGGCCCAGAAGGGTTCCTCCGTTAGACTCCCTGTTGCTCAAATGGTCTGCAA 1436
|||||||||||| ||||| || || || ||||| || |||||||| || |||||||||||
Sbjct 1605 CCGAGTCATGGCTCAGAAAGGCTCTTCTGTTAGGCTTCCTGTTGCACACATGGTCTGCAA 1664
Query 1437 CCAAACTCCACCTGTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGT 1496
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1665 CCAAACTCCACCAGTAGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGT 1724
Query 1497 GTTCCATGAATTTGGCCATGCTCTTCAGCATATGCTTACCAAAG-AGGATGAGGGGCTAG 1555
|| ||||||||||| |||||||||||||| |||||||| || | ||||||| |||||||
Sbjct 1725 ATTTCATGAATTTGGACATGCTCTTCAGCACATGCTTACGAA-GCAGGATGAAGGGCTAG 1783
Query 1556 TGGCTGGTATCCGGAATATCGAGTGGGATGCAGTTGAATTACCGTCACAGTTTATGGAGA 1615
||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1784 TGGCTGGTATCCGAAATATCGAGTGGGACGCAGTTGAATTACCATCACAGTTTATGGAGA 1843
Query 1616 ACTGGTGCTACCACAGGGATACCTTAATGAGCATTGCTAAGCATTATC-AAACAGGAGAA 1674
| ||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||
Sbjct 1844 ATTGGTGCTACCACAGGGACACTTTAATGAGCATTGCTAAGCATTA-CGAAACAGGAGAA 1902
Query 1675 ACTCTTCCC-GAG-AATGTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGT 1732
|| || ||| ||| || ||||||||||| || ||||| |||||||||||||| |||||||
Sbjct 1903 ACACT-CCCAGAGGAA-GTATACAAGAAACTCCTGGCCGCAAGAACATTCCGCGCAGGGT 1960
Query 1733 CCCTTAGTCTTCGCCAGTTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACA 1792
|| |||||||||| |||||||| ||||| | |||||||| |||||||||||||||||
Sbjct 1961 CCTTTAGTCTTCGTCAGTTGAAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATATG 2020
Query 1793 TGCCAGGTGGGGCAGAGACCATCTACGAAGTTGATCAAAGGGTGTCCA-TAAAAACACAA 1851
| ||||| || ||||| ||||||| || || ||||||||||| || | | ||||| |||
Sbjct 2021 TACCAGGAGGACCAGAGTCCATCTATGACGTAGATCAAAGGGTATC-AGTGAAAACCCAA 2079
Query 1852 GTGATCCCTCCACTTCCTGAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGT 1911
|| ||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||
Sbjct 2080 GTTATCCCTCCACTTCCTGAGGATAGATTCCTCTGTAGCTTCAGTCACATCTTTGCCGGG 2139
Query 1912 GGTTATGCAGCTGGATACTACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTT 1971
|| |||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct 2140 GGATATGCAGCTGGATATTACAGTTACAAGTGGGCAGAAGTTTTGTCTGCAGATGCATTT 2199
Query 1972 TCAGCTTTTGAAGATGCTGGGTTGGATGACATTAAGGCTGTCAAAGAAACAGGACAGAGA 2031
||||| |||||||| ||||| | |||||||| |||||||| ||||||||||||||||||
Sbjct 2200 TCAGCATTTGAAGACGCTGGACTAGATGACATCAAGGCTGTGAAAGAAACAGGACAGAGA 2259
Query 2032 TTCAGAAACACTATACTTGCTCTGGGAGGAGGAAAAGCTCCTCTAAAAGTGTTTGTGGAG 2091
|||||| |||| |||||||| || |||||||||| ||| ||||| || |||||||| |||
Sbjct 2260 TTCAGAGACACCATACTTGCACTTGGAGGAGGAAGAGCGCCTCTTAAGGTGTTTGTTGAG 2319
Query 2092 TTCAGAGGACGAGAACCTTCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCT 2151
|| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 2320 TTTAGAGGACGAGAACCTTCACCAGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCC 2379
Query 2152 TCTGCTT 2158
|||||||
Sbjct 2380 TCTGCTT 2386
> Ahg497269 jgi|Araly1|497269|fgenesh2_kg.112__1__AT5G65620.1
Length=1958
Score = 1279 bits (692), Expect = 0.0
Identities = 986/1126 (88%), Gaps = 27/1126 (2%)
Strand=Plus/Plus
Query 70 ACTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCCGTTGAT 129
||||| |||||||||||||| |||||| | || || |||||||||||||| |||||||||
Sbjct 295 ACTCTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGAT 354
Query 130 GCTCA-CCATG-TCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGG 187
|| || |||| || | ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 355 GC-CAGTCATGTTC-GTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGG 412
Query 188 AGCAGCTAGAAAAAGCTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGA 247
|| ||||||| ||| |||| ||||| || |||||||| || || || || |||||||| |
Sbjct 413 AGGAGCTAGAGAAATCTGTGGAGCCATCGTGGCCAAATCTGGTTGAACCTTTAGAGAAAA 472
Query 248 TTATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACA 307
| ||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 473 TCGTTGATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAAGCTGTTAAGGACA 532
Query 308 CACCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCGGAGAAGGTGAAGTTCCAGCTCA 367
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 533 CACCTGAGCTTCGTGCTGCCATTGAAGACGTTCAGCCAGAGAAGGTGAAGTTCCAGCTCA 592
Query 368 GGTTGGGACAGAGCAAACCCATTTACAATGCATTTAAGGCTATTCGAGAATCTCCAGACT 427
| |||||||| ||||| || ||||||||||| ||||| |||||||| |||||||| || |
Sbjct 593 GATTGGGACAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATT 652
Query 428 GG--A-AT-TCATTG-AG--CG--AA-GC-TCGT-CAACG-ATTA-G-TTGAAGCCCAAA 472
|| | | ||| || || || || || | || || | | || | || ||| ||||
Sbjct 653 GGTCATCTCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGGCAATATGTTTTCAGCTCAAA 712
Query 473 TAAAGGAGGCGGTTCTGAGT-GGTATTGCTCTTGAAGATGATAAGAGGGAAGAATTTAAC 531
|||||||||||||||| | | |||||||||||||| ||||| ||||| ||||| ||||||
Sbjct 713 TAAAGGAGGCGGTTCTCA-TAGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAAC 771
Query 532 AAAATTGAACAGGAACTTGAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCT 591
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct 772 AAAATTGAACAGGAACTCGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCT 831
Query 592 ACAAAGAAGTTTGAAAAGTTGATAACAGACAAGAAAGAGATTGAGGGGTTGCCACCATCT 651
|||||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct 832 ACAAAGAAATTTGAAAAGTTGATTACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCT 891
Query 652 GCACTTGGATTGTTCGCACAAGCAGCTGTTTCCAAGGGCCATGAAACTGCAACTGCTGAC 711
|| || || | ||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 892 GCTCTCGGGCTATTCGCACAAGCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAG 951
Query 712 ACTGGACCATGGCTCATTACACTCGATGCTCCTAGTTATCTTCCCGTTATGCAACATGCC 771
| |||||||||| |||||||||| |||||||||||||||||||| || |||||||||||
Sbjct 952 AATGGACCATGGATCATTACACTAGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCT 1011
Query 772 AAAAACCGAGCTCTGCGCGAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGT 831
|| ||||| |||||||| |||||||| |||||||||||| |||| ||||||||||| ||
Sbjct 1012 AAGAACCGTGCTCTGCGTGAGGAAGTTTACCGTGCTTACCTATCTCGTGCCTCTTCTGGC 1071
Query 832 GATTTAGATAATACAGCAATTATCGACCAAATCTTGAAGCTTCGAC-TGGAAAAGGCTAA 890
||||| ||||||||||||||||||||||| |||||||||||||| | ||||||| |||||
Sbjct 1072 GATTTGGATAATACAGCAATTATCGACCAGATCTTGAAGCTTCG-CTTGGAAAAAGCTAA 1130
Query 891 GCTTCTTGGTTACAGA-AATTATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTGG 949
|||||||||||||| | ||||| ||||||||||||||||| | ||||||||||||||| |
Sbjct 1131 GCTTCTTGGTTACA-ACAATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTG 1189
Query 950 AGAAAGCAG-ATGAGCTACTAGAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAA 1008
||||||||| | ||||| |||| |||||||| ||||| || |||||| |||||||||||
Sbjct 1190 AGAAAGCAGCA-GAGCTTTTAGAGAAGCTTCGTAGTGCATCTTGGGATGCGGCTGTTCAA 1248
Query 1009 GACATAGAAGACCTTAAGAGTTTTGCGAAGAACCAAGGTGCTGCAGAGGCTGACAGTTTG 1068
||||| |||||||| |||||||| || ||| |||| ||||| ||||| |||||||||||
Sbjct 1249 GACATGGAAGACCTCAAGAGTTTCGCAAAGGACCAGGGTGCAGCAGAATCTGACAGTTTG 1308
Query 1069 ACTCACTGGGACATCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAAT 1128
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1309 ACTCACTGGGACACCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATATGATATTAAT 1368
Query 1129 GAGGAAGAACTGCGACCTTACTTCTCATTGCCAAAGGTTATGGATG 1174
||||||||||| || || ||||||||| ||||||||||||||||||
Sbjct 1369 GAGGAAGAACTACGTCCATACTTCTCACTGCCAAAGGTTATGGATG 1414
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107643032370
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5