BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G10720.1
Length=3291
Score E
Sequences producing significant alignments: (Bits) Value
Ahg940543 jgi|Araly1|940543|scaffold_601087.1 4420 0.0
Ahg940536 jgi|Araly1|940536|scaffold_601080.1 2244 0.0
Ahg942383 jgi|Araly1|942383|scaffold_602927.1 298 2e-79
Ahg922587 jgi|Araly1|922587|scaffold_103868.1 298 2e-79
Ahg930977 jgi|Araly1|930977|scaffold_303434.1 294 2e-78
Ahg925349 jgi|Araly1|925349|scaffold_200910.1 292 8e-78
> Ahg940543 jgi|Araly1|940543|scaffold_601087.1
Length=2813
Score = 4420 bits (2393), Expect = 0.0
Identities = 2678/2817 (95%), Gaps = 13/2817 (0%)
Strand=Plus/Plus
Query 358 ATGAAGAGAAACCTTGATCAATGGTCTGTGAAATGGAGACTGATCAGATTGAGGAAATGG 417
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2 ATGAAGAGAAACTTTGATAAATGGTCTGTGAAATGGAGACTGATCAGATTGAGGAAATGG 61
Query 418 ATGTCGAAGTTTTGTCTTCGATGTGGCCCGAAGATGTTGGAACTGAAGCTGACAAACAGT 477
|||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 62 ATGTCGAAGTCTTGTCTTCCATGTGGCCCGAAAATGTTGGAACTGAAGCTGACAAACAGT 121
Query 478 TCAACGTCGAGAAACCTGCCGGAGATTTAGACACGTTGAAAGAAGTTACTA-T--CGAGA 534
||||||| ||||||||||| |||||||||||||||||||||||||| || | | ||||
Sbjct 122 TCAACGTTGAGAAACCTGCTGGAGATTTAGACACGTTGAAAGAAGTGACAATTGAAGAGA 181
Query 535 CACGGACCATTGCGGATATGACACGGTTACCA-AACCTATTGAATTCGACTCATCAAGGC 593
|| |||||||||||| ||||||| |||||| || ||| ||||||||||||| ||||||
Sbjct 182 AACCCACCATTGCGGATTTGACACGCTTACCAGAA-CTAATGAATTCGACTCAACAAGGC 240
Query 594 TCCTCTCAACTAACCAACCTTGTGAAACAATGGGAGTATATGCAAGACAACGCGGTTCGG 653
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 241 TCGTCTCAGCTAACCAACCTTGTGAAACAATGGGAGTATATGCAAGACAACGCGGTTC-G 299
Query 654 C-TGTTAAAAGAAGAGCTAAAAAATCTCGATAGACAGAGAGAAGAAGCCGAGGCTAAAGA 712
| | |||| ||||||||| || |||||| ||||||||||||||||||| || || |||||
Sbjct 300 CTTATTAAGAGAAGAGCTTAAGAATCTCAATAGACAGAGAGAAGAAGCTGAAGCAAAAGA 359
Query 713 GTTGAAGATCATTGAGGAGTATAAGTTTGAGAGCAACGAGCCTGAGAATGTTCCGGTTTT 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GTTGAAGATCATTGAGGAGTATAAGTTTGAGAGCAACGAGCCTGAGAATGTTCCGGTTTT 419
Query 773 GGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAAAAACGAGATGCCTTGGTCGA 832
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 420 GGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAGAAACGAGATGCGTTGGTCGA 479
Query 833 TAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACTGTTGCATATTGGAAACAGAAGGC 892
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 480 TAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACGGTTGCATATTGGAAACAGAAGGC 539
Query 893 GTTGAGTCTTGAGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGGCGATTGATGGAGAA 952
||||| ||| |||||||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct 540 GTTGAATCTGGAGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGGAGATTGGTCGAGAA 599
Query 953 GCTGAGTGAGAGTTTGAAAACTATGGAGAGTCAGTCAGCACCGGTCCAAGAGCTTACTCA 1012
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 600 GCTGAGTGAGAGTTTGAAGACTATGGAGAGTCAGTCAGCACCGGTCCAAGAGCTAACTCA 659
Query 1013 GAATCTTAAGAGAGCTGAAGGTTTCTTGCATTTCATACTTCAGAATGCACCTATTGTTAT 1072
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GAATCTTGAGAGAGCTGAAGGTTTCTTGCATTTCATACTTCAGAATGCACCTATTGTTAT 719
Query 1073 GGGCCATCAGGATAAAGATTTACGCTACTTGTTCATCTACAACAAGTATCCTAGTTTACG 1132
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 720 GGGTCATCAGGATAAAGATTTACGCTACTTGTTTATCTACAACAAGTATCCTAGTTTGCG 779
Query 1133 GGAACAGGACATTTTGGGAAAAACAGACGTGGAGATATTCCATGGAGGTGGAGTTAAAGA 1192
||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 780 GGAGCAGGACATTTTGGGAAAAACAGACGTTGAGATATTCCACGGAGGTGGCGTTAAAGA 839
Query 1193 ATCTGAAGATTTCAAGAGAGAAGTTCTTGAGAAAGGAAAAGCTTCAAAGAGAGAGATCAC 1252
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 ATCTCAAGATTTCAAGAGAGAAGTTCTTGAGAAAGGAAAAGCTTCAAAGAGAGAGATCAC 899
Query 1253 ATTTACTACAGATTTATTTGGATCAAAGACGTTTTTGATATATGTTGAGCCTGTTTACAA 1312
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 900 ATTTACGACAGATTTATTCGGATCAAAGACGTTTTTGATATATGTTGAGCCTGTTTACAA 959
Query 1313 CAAAGCTGGCGAGAAAATCGGTATAAACTACATGGGAATGGAAGTAACTGATCAGGTAG- 1371
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 960 CAAAGCTGGCGAGAAAATCGGTATAAACTACATGGGAATGGAAGTAACTGAACAGGTAGA 1019
Query 1372 TGAAAAGGGAGAAAATGGCGAAACTTAGAGAAGATAACGCTGTGAGAAAGGCGATGGAAT 1431
| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1020 T-AAAAGGGAGAAAATGGCGAAACTAAGAGAAGATAACGCAGTGAGAAAGGCGATGGAAT 1078
Query 1432 CAGAACTGAACAAGACTATTCACATTACAGAGGAGACAATGAGAGCAAAGCAGATGCTAG 1491
|||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||
Sbjct 1079 CAGAACTGAACAAGACCATCCACATTACAGAGGAGACAATGAGAGCGAAGCAAATGCTAG 1138
Query 1492 CGACGATGTCTCATGAGATAAGGTCACCATTGTCAGGAGTAGTGGGAATGGCTGAGATAC 1551
|||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct 1139 CGACGATGTCTCATGAGATAAGATCACCATTATCCGGAGTAGTGGGAATGGCTGAGATTC 1198
Query 1552 TTTCAACTACAAAACTGGATAAAGAGCAAAGACAGTTGTTGAATGTCATGATCTCTTCTG 1611
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1199 TTTCAACTACAAGACTGGATAAAGAGCAGAGACAGTTGTTGAATGTCATGATCTCTTCTG 1258
Query 1612 GTGATTTGGTGCTTCAGCTAATCAACGACATTCTTGATCTCTCCAAGGTTGAATCAGGTG 1671
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1259 GGGATTTGGTGCTTCAGCTAATCAACGACATTCTTGATCTTTCCAAGGTTGAATCAGGTG 1318
Query 1672 TGATGAGATTAGAAGCTACAAAGTTTCGACCAAGAGAAGTAGTGAAGCATGTGCTACAGA 1731
|||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct 1319 TGATGAAATTAGAAGCTACAAAGTTTCGACCAAGAGAAGTGGTCAAGCATGTGCTTCAGA 1378
Query 1732 CAGCTGCAGCATCGCTGAAGAAATCTTTGACATTAGAAGGAAACATTGCAGATGATGTTC 1791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 CAGCTGCAGCATCGCTGAAGAAATCTTTGACATTAGAAGGAAACATTGCAGATGATGTTC 1438
Query 1792 CTATTGAGGTAGTTGGAGATGTTCTAAGGATTAGGCAGATCCTCACCAATTTGATAAGCA 1851
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1439 CTATTGAGGTAGTTGGAGATGTTCTAAGGATTCGGCAGATCCTCACCAATTTGATAAGCA 1498
Query 1852 ATGCTATCAAGTTTACACATGAAGGAAATGTAGGAATCAAACTCCAAGTGATATCAGAAC 1911
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1499 ATGCTATCAAGTTTACACATGAAGGAAATGTTGGAATCAAACTCCAAGTGATATCAGAAC 1558
Query 1912 CATCCTTTGTGCGGGATAACGCATTGAACGCAGACACCGAGGAACACGAACAAAACGGTT 1971
||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct 1559 CATCCTTTGCGCGGGATAACACATTGACCGCAGACACCGAGGAACAAGAACAAAACGGTT 1618
Query 1972 TGACCGAGACTTCAGTTTGGATTTGCTGTGACGTATGGGACACTGGAATTGGAATCCCAG 2031
|||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct 1619 TGACCGAGACTTCAGTTTGGATCTGCTGTGATGTTTGGGACACTGGAATTGGAATCCCAG 1678
Query 2032 AAAACGCTCTTCCATGTTTGTTCAAGAAGTACATGCAAGCAAGCGCTGATCATGCCCGAA 2091
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1679 AAAACGCTATTCCATGTTTGTTCAAGAAGTACATGCAAGCAAGCGCTGATCATGCCCGCA 1738
Query 2092 AATACGGTGGGACTGGTCTCGGACTTGCTATTTGTAAACAGCTGGTTGAGTTAATGGGAG 2151
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1739 AATACGGTGGAACTGGTCTCGGACTTGCCATTTGTAAACAGCTGGTTGAGTTAATGGGAG 1798
Query 2152 GCCAACTCACTGTGACAAGCCGGGTGAGCGAAGGTTCAACGTTCACATTTATATTACCCT 2211
| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1799 GTCAACTCACTGTGACAAGCCGTGTGAACGAAGGTTCAACGTTCACATTTATATTACCCT 1858
Query 2212 ACAAAGTTGGAAGATCAGATGATTATTCAGATGATCAAGATGAGTTCTCTGATATGGCGG 2271
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1859 ACAAAGTTGGAACATCAGATGATTATTCAGATGATCAAGATGAGTTCTCTGACATGGCGG 1918
Query 2272 ATCAACAATCTGAACCAGACGATACAGCTGAAGGATATTTCCAGTTTAAACCGCT-CTTA 2330
|||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| || |
Sbjct 1919 ATCATCAATCCGAACCAGACGATACAACTGAAGGATATTTCCAGTTTAAACCGCTTCT-A 1977
Query 2331 GGATCGATATATTCGAATGGCGGACCGGGGATCAGCAATGACTTCTTACCTCATAAAGTC 2390
||||| |||||||| ||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 1978 GGATCTATATATTCTAATGGCGGACCAGGCATCGGCAATGACTTCTTACCTCATAAAGTC 2037
Query 2391 ATGCTTACTAGTCCTATTAAGCTCATCAATGGTTTTGTCGCTGATCCCTCTAATAACACT 2450
|||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||
Sbjct 2038 ATGCTTACTAGTCCTATTAAGCTCATGAATAGTTTTGTCGCTGATCCTTCTAACAACACT 2097
Query 2451 GGACAGAGCGAGATGCTACAGCTTGAAAACGGTGGTTACATGGATGAATCTAAACTCGAA 2510
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2098 GGACAGAGCGAGATGCTTCAGCTTGAAAACGGTGGTTACGTGGATGAATCTAAACTCGAA 2157
Query 2511 ACCAGTTCTGGTCATTGCCCTGAATCAGCTCACCAATATGAGAATGGAAATGGTCGATGT 2570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2158 ACCAGTTCTGGTCATTGCCCTGAATCAGCTCACCAATATGAGAATGGAAATGGTCGATGT 2217
Query 2571 TTCTCTAAGGAATCTGAATCTTGTAGCAGTTCACAAGCTAGCTCAGAAGGTGGAACCTTA 2630
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 TTCTCCAAGGAATCTGAATCTTGTAGCAGTTCACAAGCTAGCTCAGAAGGTGGAACCTTA 2277
Query 2631 GAAATGGAGTCAGAGCTCACAGTTTCATCTCATAGGGAAGAGGAAAAAGCCGAGACAGAA 2690
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2278 GAAATGGAGTCGGAGCTTACAGTTTCATCTCATAGGGAAGAGGAAAAAGCCGAGACAGAT 2337
Query 2691 GTAAAAGAAACATCAAAGCCAAAGATTTTGCTTGTGGAAGATAATAAGATCAACATCATG 2750
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2338 CTAAAAGAAACATCAAAGCCAAAGATTTTGCTTGTGGAAGATAATAAGATCAATATCATG 2397
Query 2751 GTTGCAAAGTCGATGATGAAGCAGTTAGGCCATACCATGGATATTGCTAATAATGGAGTT 2810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2398 GTTGCAAAGTCGATGATGAAGCAGTTAGGCCATACCATGGATATTGCTAATAATGGAGTT 2457
Query 2811 GAAGCCATAACCGCGATTAAT-AGCTCTAGCTACGATCTGGTACTCATGGATGTGTGCAT 2869
|||||||||||||| || ||| | |||||| |||||||||||||||||||||||||||||
Sbjct 2458 GAAGCCATAACCGCTATAAATCA-CTCTAGTTACGATCTGGTACTCATGGATGTGTGCAT 2516
Query 2870 GCCGGTGCTCGATGGTTTAAAAGCTACAAGACTGATCCGTTCGTATGAAGAAACTGGGAA 2929
||| || || |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2517 GCCAGTTCTGGATGGTTTAAAAGCTACAAGACTGATCCGTTCATATGAAGAAACTGGGAA 2576
Query 2930 CTGGAATGCTGCAATAGAAGCCGGAGTAGATATATCGACATCGGAGAATGAACAAGTTTG 2989
|||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||
Sbjct 2577 CTGGAATGCTGCAATAGAAGCCGGCGTAGATATAAAGACATTGGAGAATGAGCAAGTTTG 2636
Query 2990 TATGCGTCCCACAAACCGGCTGCCTATAATCGCGATGACGGCAAATACTTTAGCAGAGAG 3049
| ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2637 TGTGCGTTCCACAAACCGGCTGCCTATAATCGCGATGACAGCAAATACGTTAGCAGAGAG 2696
Query 3050 TTCAGAAGAATGTTATGCAAATGGTATGGACTCGTTTATTTCGAAACCTGTAACGTTGCA 3109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2697 TTCAGAAGAATGTTATGCAAATGGTATGGACTCGTTTATTTCGAAACCTGTAACGTTGCA 2756
Query 3110 AAAACTGAGAGAGTGTTTGCAACAGTATTTGCACTGAGATTTCAGATTTTTGTGTTT 3166
|||||||||||||||||| |||||||||||||| ||| |||||||| ||| ||||||
Sbjct 2757 AAAACTGAGAGAGTGTTTACAACAGTATTTGCATTGACATTTCAGAGTTTGGTGTTT 2813
> Ahg940536 jgi|Araly1|940536|scaffold_601080.1
Length=2581
Score = 2244 bits (1215), Expect = 0.0
Identities = 1365/1436 (95%), Gaps = 16/1436 (1%)
Strand=Plus/Plus
Query 905 GAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGGCGATTGATGGAGAAGCTGAGTGAGAG 964
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 485 GAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGGAGATTGATCGAGAAGCTGAGTGAGAG 544
Query 965 TTTGAAAACTATGGAGAGTCAGTCAGCACCGGTCCAAGAGCTTACTCAGAATCTTAAGAG 1024
|||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 545 TTTGAAGACTATGGAAAGTCAGTCAGCACCGGTCCAAGAGCTAACTCAGAATCTTAAGAA 604
Query 1025 AGCTGAAGGTTTCTTGCATTTCATACTTCAGAATGCACCTATTGTTATGGGCCATCAGGA 1084
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 605 AGCTGAAGGTTTCTTGCATTTCATACTTCAGAATGCACCTATTGTAATGGGCCATCAGGA 664
Query 1085 TAAAGATTTACGCTACTTGTTCATCTACAACAAGTATCCTAGTTTACGGGAACAGGACAT 1144
|| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 665 TATAGATTTACGTTACTTGTTCATCTACAACAAGTATCCTAGTTTGCGGGAACAGGACAT 724
Query 1145 TTTGGGAAAAACAGACGTGGAGATATTCCATGGAGGTGG-AGTTAAAGAATCTGAAGATT 1203
|||||||||||||||||| ||||||||||| |||||||| | ||||||||| | ||||||
Sbjct 725 TTTGGGAAAAACAGACGTTGAGATATTCCACGGAGGTGGCA-TTAAAGAATATCAAGATT 783
Query 1204 TCAAGAGAGAAGTTCTTGAGAAAGGAAAAGCTTCAAAGAGAGAGATCACATTTACTACAG 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 784 TCAAGAGAGAAGTTCTTGAGAAAGGAAAAGCTTCAAAGAGAGAGATCACATTTACGACAG 843
Query 1264 ATTTATTTGGATCAAAGACGTTTTTGATATATGTTGAGCCTGTTTACAACAAAGCTGGCG 1323
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 844 ATTTATTCGGATCAAAGACGTTTTTGGTATATGTTGAGCCTGTTTACAACAAAGCTGGCG 903
Query 1324 AGAAAATCGGTATAAACTACATGGGAATGGAAGTAACTGATCAGGTAG-TGAAAAGGGAG 1382
|||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||
Sbjct 904 AGAAAATCGGTATAAACTACATGGGAATGGAAGTAACTGAACAGGTAGAT-AAAAGGGAG 962
Query 1383 AAAATGGCGAAACTTAGAGAAGATAACGCTGTGAGAAAGGCGATGGAATCAGAACTGAAC 1442
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 963 AAAATGGCGAAACTTAGAGAAGATAACGCAGTGAGAAAGGCGATGGAATCAGAACTGAAC 1022
Query 1443 AAGACTATTCACATTACAGAGGAGACAATGAGAGCAAAGCAGATGCTAGCGACGATGTCT 1502
||||| || |||||||||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 1023 AAGACCATCCACATTACAGAGGAGACAATGAGAGCGAAGCAAATGCTAGCGACAATGTCT 1082
Query 1503 CATGAGATAAGGTCACCATTGTCAGGAGTAGTGGGAATGGCTGAGATACTTTCAACTACA 1562
||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1083 CATGAGATAAGATCACCATTATCCGGAGTAGTGGGAATGGCTGAGATACTTTCAACTACA 1142
Query 1563 AAACTGGATAAAGAGCAAAGACAGTTGTTGAATGTCATGATCTCTTCTGGTGATTTGGTG 1622
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1143 AAACTGGATAAAGAGCAAAGACAGTTGTTGAATGTCATGATCTCTTCTGGGGATTTGGTG 1202
Query 1623 CTTCAGCTAATCAACGACATTCTTGATCTCTCCAAGGTTGAATCAGGTGTGATGAGATTA 1682
||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||
Sbjct 1203 CTTCAGCTAATCAACGACATTCTTGATATTTCCAAGGTTGAATCAGGTGTGATGAAATTA 1262
Query 1683 GAAGCTACAAAGTTTCGACCAAGAGAAGTAGTGAAGCATGTGCTACAGACAGCTGCAGCA 1742
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||
Sbjct 1263 GAAGCTACAAAGTTTCGACCAAGAGAAGTGGTCAAGCATGTGCTTCAGACAGCTGCAGCA 1322
Query 1743 TCGCTGAAGAAATCTTTGACATTAGAAGGAAACATTGCAGATGATGTTCCTATTGAGGTA 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323 TCGCTGAAGAAATCTTTGACATTAGAAGGAAACATTGCAGATGATGTTCCTATTGAGGTA 1382
Query 1803 GTTGGAGATGTTCTAAGGATTAGGCAGATCCTCACCAATTTGATAAGCAATGCTATCAAG 1862
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1383 GTTGGAGATGTTCTAAGGATTCGGCAGATCCTCACCAATTTGATAAGCAATGCTATCAAA 1442
Query 1863 TTTACACATGAAGGAAATGTAGGAATCAAACTCCAAGTGATATCAGAACCATCCTTTGTG 1922
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1443 TTCACACATGAAGGAAATGTAGGAATCAAACTCCAAGTGATATCAGAACCATCCTTTGCG 1502
Query 1923 CGGGATAACGCATTGAACGCAGACACCGAGGAACACGAACAAAACGGTTTGACCGAGACT 1982
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 AGGGATAACGCATTGAACGCAGACACCGAGGAACACGAACAAAACGGTTTGACCGAGACT 1562
Query 1983 TCAGTTTGGATTTGCTGTGACGTATGGGACACTGGAATTGGAATCCCAG--AA--AA-C- 2036
||||||||||| |||||||| || ||||||||||||||||||||||||| || || |
Sbjct 1563 TCAGTTTGGATCTGCTGTGATGTTTGGGACACTGGAATTGGAATCCCAGGCAAGCAAGCA 1622
Query 2037 ------GCTCTTCCATGTTTGTTCAAGAAGTACATGCAAGCAAGCGCTGATCATGCCCGA 2090
||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 AAAAACGCTATTCCATGTTTGTTCAAGAAGTACATGCAAGCAAGCGCTGATCATGCCCGC 1682
Query 2091 AAATACGGTGGGACTGGTCTCGGACTTGCTATTTGTAAACAGCTGGTTGAGTTAATGGGA 2150
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1683 AAATACGGTGGAACTGGTCTCGGACTTGCCATTTGTAAACAGCTGGTTGAGTTAATGGGA 1742
Query 2151 GGCCAACTCACTGTGACAAGCCGGGTGAGCGAAGGTTCAACGTTCACATTTATATTACCC 2210
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1743 GGTCAACTCACTGTGACAAGCCGGGTGAACGAAGGTTCAACGTTCACATTTATATTACCC 1802
Query 2211 TACAAAGTTGGAAGATCAGATGATTATTCAGATGATCAAGATGAGTTCTCTGATATGGCG 2270
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1803 TACAAAGTTGGAACATCAGATGATTATTCAGATGATCAAGATGAGTTCTCTGACATGGCG 1862
Query 2271 GATCAACAATCTGAACCAGACGATACAGCTGAAGGATATTTCCAGTTTAAACCGCT 2326
||||| || || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1863 GATCATCACTCCAAACCAGACGATACAGCTGAGGGATATTTCCAGTTTAAACCGCT 1918
Score = 702 bits (380), Expect = 0.0
Identities = 447/479 (93%), Gaps = 5/479 (1%)
Strand=Plus/Plus
Query 391 TGGAGACTGATCAGATTGAGGAAATGGATGTCGAAGTTTTGTCTTCGATGTGGCCCGAAG 450
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1918 TGGAGACTGATCAGATTGAGGAAATGGATGTCGAAGTCTTGTCTTCGATGTGGCCCGAAG 1977
Query 451 ATGTTGGAACTGAAGCTGACAAACAGTTCAACGTCGAGAAACCTGCCGGAGATTTAGACA 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 ATGTTGGAACTGAAGCTGACAAACAGTTCAACGTCGAGAAACCTGCCGGAGATTTAGACA 2037
Query 511 CGTTGAAAGAAGTTACTATCGA-GACA--CGGACCATTGCGGATATGACACGGTTACCA- 566
| ||||||||||| || || || || | | |||||||||||| ||||||| ||||||
Sbjct 2038 CATTGAAAGAAGTGACGATTGAAGAGAAACTAACCATTGCGGATTTGACACGCTTACCAG 2097
Query 567 AACCTATTGAATTCGACTCATCAAGGCTCCTCTCAACTAACCAACCTTGTGAAACAATGG 626
||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2098 AAC-TATTGAATTCGACTCCTCAAGGCTCCTCTCAACTAACCAACCTTATGAAACAATGG 2156
Query 627 GAGTATATGCAAGACAACGCGGTTCGGCTGTTAAAAGAAGAGCTAAAAAATCTCGATAGA 686
|||||||||||| |||||||||||||||| |||| ||||||||| || |||||| |||||
Sbjct 2157 GAGTATATGCAACACAACGCGGTTCGGCTATTAAGAGAAGAGCTTAAGAATCTCAATAGA 2216
Query 687 CAGAGAGAAGAAGCCGAGGCTAAAGAGTTGAAGATCATTGAGGAGTATAAGTTTGAGAGC 746
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2217 CAGAGAGAAGAAGCTGAGGCAAAAGAGTTGAAGATCATTGAGGAGTATAAGTTTGAGAGC 2276
Query 747 AACGAGCCTGAGAATGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTTTAGG 806
|||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||||||
Sbjct 2277 AACGAGCCTGAGAATGTTTCAGTTTTGGATGAGACGAGTGATTGGTTCCGCGGGTTTAGG 2336
Query 807 CAGAAAAAACGAGATGCCTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGA 865
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2337 CAGAAGAAACGAGATGTGTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGA 2395
Score = 634 bits (343), Expect = 1e-180
Identities = 409/440 (93%), Gaps = 7/440 (2%)
Strand=Plus/Plus
Query 388 AAATGGAGACTGATCAGATTGAGGAAATGGATGTCGAAGTTTTGTCTTCGATGTGGCCCG 447
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 19 AAATGGAGACTGATCAGATTGAGGAAATGGATGTCGAAGTCTTGTCTTCAATGTGGCCCG 78
Query 448 AAGATGTTGGAACTGAAGCTGACAAACAGTTCAACGTCGAGAAACCTGCCGGAGATTTAG 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 79 AAGATGTTGGAACTGAAGCTGACAAACAGTTCAACGTCGAGAAACCTGCCGGAGATTTAG 138
Query 508 ACACGTTGAAAGAAGTTACTATCGA-GACA--CGGACCATTGCGGATATGACACGGTTAC 564
||||||||| |||||| || || || || | | ||||||||||||| ||||||||||||
Sbjct 139 ACACGTTGACAGAAGTGACAATTGAAGAGAAACCGACCATTGCGGATTTGACACGGTTAC 198
Query 565 CA-AACCTATTGAATTCGACTCATCAAGGCTCCTCTCAACTAACCAACCTTGTGAAACAA 623
|| ||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 199 CAGAAC-TAATGAATTCGACTCAACAAGGCTCCTCTCAACTAACCAACCTTGTGAAACAA 257
Query 624 TGGGAGTATATGCAAGACAACGCGGTTCGGCTGTTAAAAGAAGAGCTAAAAAATCTCGAT 683
|||||||||||||||||||||||||||||||| ||| ||||||||| || || ||| ||
Sbjct 258 TGGGAGTATATGCAAGACAACGCGGTTCGGCTACTAAGAGAAGAGCTTAAGAACCTCAAT 317
Query 684 AGACAGAGAGAAGAAGCCGAGGCTA-AAGAGTTGAAGATCATTGAGGAGTATAAGTTTGA 742
||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||
Sbjct 318 AGACAGAGAGAAGAAGCTGAGGC-ACAAGAGTTGAAGATTATTGAGGAGTATAAGTTTGA 376
Query 743 GAGCAACGAGCCTGAGAATGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTT 802
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 377 GAGCAACGAGCCTGAGAATGTTCCGGTTTTGGATGAGACGAGTGATTCATTCCGCAGGTT 436
Query 803 TAGGCAGAAAAAACGAGATG 822
|||||| |||||| ||||||
Sbjct 437 TAGGCATAAAAAAAGAGATG 456
> Ahg942383 jgi|Araly1|942383|scaffold_602927.1
Length=250
Score = 298 bits (161), Expect = 2e-79
Identities = 194/210 (92%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 759 AATGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAAAAACGA 818
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 30 AATGTTCCGGTTTTGGATGAGACTAGTGATTTGTTCCGCAGGTTTAGGCAGAAGAAACGA 89
Query 819 GATGCCTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACTGTTGCATAT 878
||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 90 GATGCGTTGTTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACGGTTGCATAT 149
Query 879 TGGAAACAGAAGGCGTTGAGTCTTGAGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGG 938
||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||
Sbjct 150 TGGAAACAGAAGGCGTTGAATCTGGAGAAAATGCTTGAGGCAAGTACTGAGAGAGAAAGG 209
Query 939 CGATTGATGGAGAA--GCTGAGTGAGAGTT 966
|| | || |||| |||||||||| |||
Sbjct 210 AGACTAATCAAGAATAGCTGAGTGAGGGTT 239
> Ahg922587 jgi|Araly1|922587|scaffold_103868.1
Length=250
Score = 298 bits (161), Expect = 2e-79
Identities = 194/210 (92%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 759 AATGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAAAAACGA 818
||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct 30 AATGTTCCGGTTTTGGATGAGACTAGTGATTTGTTCCGCAGGTTTATGCAGAAGAAACGA 89
Query 819 GATGCCTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACTGTTGCATAT 878
||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 90 GATGCGTTGTTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACGGTTGCATAT 149
Query 879 TGGAAACAGAAGGCGTTGAGTCTTGAGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGG 938
||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||
Sbjct 150 TGGAAACAGAAGGCGTTGAATCTGGAGAAAATGCTTGAGGCAAGTACTGAGAGAGAAAGG 209
Query 939 CGATTGATGGAGAA--GCTGAGTGAGAGTT 966
|| | || ||||| |||||||||| |||
Sbjct 210 AGACTAATCGAGAATAGCTGAGTGAGGGTT 239
> Ahg930977 jgi|Araly1|930977|scaffold_303434.1
Length=250
Score = 294 bits (159), Expect = 2e-78
Identities = 193/209 (92%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 761 TGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAAAAACGAGA 820
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 32 TGTTCCGGTTTTGGATGAGACTAGTGATTTGTTCCGCAGGTTTAGGCAGAAGAAACGAGA 91
Query 821 TGCCTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACTGTTGCATATTG 880
||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 92 TGCGTTGTTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACGGTTGCATATTG 151
Query 881 GAAACAGAAGGCGTTGAGTCTTG-AGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGGC 939
||||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||
Sbjct 152 GAAACAGAAGGCGTTGAAT-TTGGAGAAAATGCTTGAGGCAAGTACTGAGAGAGAAAGGA 210
Query 940 GATTGATGGAGAA--GCTGAGTGAGAGTT 966
|| | || ||||| |||||||||| |||
Sbjct 211 GACTAATCGAGAATAGCTGAGTGAGGGTT 239
> Ahg925349 jgi|Araly1|925349|scaffold_200910.1
Length=250
Score = 292 bits (158), Expect = 8e-78
Identities = 193/210 (92%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 759 AATGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAAAAACGA 818
||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||
Sbjct 30 AATGTTCCGGTTTTGGATGAGACTAATGATTTGTTCCGCAGGTTTATGCAGAAGAAACGA 89
Query 819 GATGCCTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACTGTTGCATAT 878
||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 90 GATGCGTTGTTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACGGTTGCATAT 149
Query 879 TGGAAACAGAAGGCGTTGAGTCTTGAGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGG 938
||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||
Sbjct 150 TGGAAACAGAAGGCGTTGAATCTGGAGAAAATGCTTGAGGCAAGTACTGAGAGAGAAAGG 209
Query 939 CGATTGATGGAGAA--GCTGAGTGAGAGTT 966
|| | || ||||| |||||||||| |||
Sbjct 210 AGACTAATCGAGAATAGCTGAGTGAGGGTT 239
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124219918272
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5