BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G10800.1
Length=3088
Score E
Sequences producing significant alignments: (Bits) Value
Ahg942061 jgi|Araly1|942061|scaffold_602605.1 2449 0.0
Ahg325618 jgi|Araly1|325618|fgenesh1_pm.C_scaffold_6000838 1668 0.0
> Ahg942061 jgi|Araly1|942061|scaffold_602605.1
Length=2887
Score = 2449 bits (1326), Expect = 0.0
Identities = 2413/2921 (83%), Gaps = 141/2921 (5%)
Strand=Plus/Plus
Query 11 ATGAGTTCTTTCTCGATCACCCTGGAAGAAAACACCGTTCCAGAAACACagagaagaaga 70
|||||||| ||||||||||| | | |||||||| || |||||||||||||||||||||||
Sbjct 21 ATGAGTTCATTCTCGATCACTC-GAAAGAAAACGCCATTCCAGAAACACAGAGAAGAAGA 79
Query 71 agaagc-caagaagaagagaGCGGAGGATGAAACAGCTCGTCTGTATCAAGAGTCCGTGG 129
|||||| | |||||||| ||||||||||||||| |||||| |||||||||| | |||||
Sbjct 80 AGAAGCTC-GGAAGAAGAAAGCGGAGGATGAAACGGCTCGTTTGTATCAAGAATTCGTGG 138
Query 130 AATCGTTTCAAGGGGATAATGCTGC-AGCTAAGACTTTTGTTAGAGGT--GACAATCAAT 186
||||||||||||| |||||||| | | |||||||||||||| ||||| ||| || |||
Sbjct 139 AATCGTTTCAAGGAGATAATGCAACTA-CTAAGACTTTTGTTCGAGGTGGGACGATAAAT 197
Query 187 CCCAATGATAATAAG-CTCAAGCCTGATTCTCAAGGTGAAAAGTCCAG-AGATGGGGATT 244
|| || | | ||| || ||| ||||||| |||||||||||||| | |||||||| ||
Sbjct 198 -CC--TGGTGACAAGCCT-AAGGTTGATTCTGAAGGTGAAAAGTCC-GAAGATGGGGGTT 252
Query 245 CCATTTCAAAGAAGGGGAGTAGGTATGTTCCCTCCTTT-CTCCCCCCACCATTGGCATCT 303
| |||||||||||||||||||||||||||||| |||| || || |||||| ||||||||
Sbjct 253 CGGTTTCAAAGAAGGGGAGTAGGTATGTTCCCT-CTTTCCTTCCACCACCACTGGCATCT 311
Query 304 AAGGGTAAAGGACCAGAGAATAAGAGGGATGAAGAGAGATCAAAGGAGATG-GAAAAGGG 362
|||||||||| ||| ||||| |||||||| || ||||| | | ||||| | ||||||||
Sbjct 312 AAGGGTAAAGAACCGGAGAAGAAGAGGGAGGAGGAGAGGCCTAGGGAGA-GAGAAAAGGG 370
Query 363 AAAGACTCGAAACATAGATCATTTTGTGGAGGAGCTCAAGCGTGAACAAGAAATAAGAGA 422
|||||||||||| ||||||||||| |||||||| | || |||||||||||||| |||||
Sbjct 371 AAAGACTCGAAATATAGATCATTTCATGGAGGAGTTGAAACGTGAACAAGAAATGAGAGA 430
Query 423 AAGGCGAAACCAGGATCGCGAGAATTCCCGTGACCATAATAGTGATAACACGTCATCTAG 482
|| |||||||||||| || | | |||| | | |||||||| || |||||||
Sbjct 431 GAGACGAAACCAGGAT--CGTG-A---CCGT---C---AGGGTGATAACTCGCCATCTAG 478
Query 483 CCGCTTTGATGAGCTACCTGATTATTTTGATCCCAGTGGAAGGTTAGGGTCATTGGACGA 542
|||||||||||||||||||||| |||||||||||||||||||| ||| || || |||||
Sbjct 479 CCGCTTTGATGAGCTACCTGATGATTTTGATCCCAGTGGAAGGCCAGGATCGTTTGACGA 538
Query 543 TGGTGACCCACAAACTACAAATCTATATGTTGTGAATCTTTCATCTAAGGTTGATGAAAA 602
|||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||
Sbjct 539 TGGTGACCCACAAACTACAAATCTATATGTTGGGAATCTGTCCCCAAAGGTTGATGAGAA 598
Query 603 TTTTCTTCTGCGGACTTTTGGAAGATTTGGGCCAATAGCTAGTGTTAAAATTATGTGGCC 662
||| |||||||| ||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct 599 TTTCCTTCTGCGCACTTTCGGAAGATTTGGACCCATAGCTAGTGTCAAGATTATGTGGCC 658
Query 663 AAGAACAGAGGAGGAGAAAAGGCGAGAAAGGCATTGTGGCTTTGTTGCTTTCATGAATAG 722
||||||||| |||||||| |||||| |||| | |||||||||||| | |||||||||||
Sbjct 659 AAGAACAGATGAGGAGAAGAGGCGACAAAGAAACTGTGGCTTTGTTTCCTTCATGAATAG 718
Query 723 AGCCGACGGAGAAGCTGCAAAAGA-GAAAATGCAAGGGATCATTGTGTATGAGTATGAGC 781
|| || ||| ||||||||||||| |||| |||||||||||||||||||||||||||| |
Sbjct 719 GGCTGATGGACAAGCTGCAAAAGATGAAA-TGCAAGGGATCATTGTGTATGAGTATGAAC 777
Query 782 TGAAAATTGGATGGGGTAAAGTAGTTTTTCTGCCATCACAAGCACTACCAGCTCCACCTC 841
||||||||||||||||||||| ||||| ||| || ||||||||| |||| ||||| || |
Sbjct 778 TGAAAATTGGATGGGGTAAAGCAGTTTCTCTACCGTCACAAGCATTACCCGCTCCTCCAC 837
Query 842 CTGGGCATATGGCAATCCGGAGTAAGGAGGGCTGCAATTTAATTTTTTCTGTT-ACATCG 900
|||| |||||||| || |||||||| ||||||||||| || ||||||||| | | | ||
Sbjct 838 CTGGACATATGGCTATTCGGAGTAAAGAGGGCTGCAACTTGGTTTTTTCTGGTCAAA-CG 896
Query 901 GGTCCACCAATGA-A--TTCCGTTCCAAATCAAAATTCTGAGCTGGTTCTTACCCCAAAT 957
||||||||||| | | ||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 897 GGTCCACCAATTATAACTTCTGTTCCAAATCAAAATTCTGAGCTGGTTCTTACCCCTAAC 956
Query 958 GTTCCGGATATCACTGTTATTTCTCCTGAGGACGAGCACCTCAAACA-GATTATAGATAC 1016
|||||||||||||||||| || | ||||||||||||||||||| ||| | | || |||||
Sbjct 957 GTTCCGGATATCACTGTTGTTACCCCTGAGGACGAGCACCTCAGACATG-TGATTGATAC 1015
Query 1017 AATGGCCCT-TAATGTACTGGACGGTGGATGCGCTTTTGAACAAGCTATTATGGAGAGGG 1075
| |||| || || ||| ||||| |||| ||| ||||||||||||||||| ||||||||||
Sbjct 1016 ATTGGCTCTCTA-TGTTCTGGATGGTGAATGTGCTTTTGAACAAGCTATCATGGAGAGGG 1074
Query 1076 GGCGTGGTAATCCACTTTTTAACTTCTTGTTTGAGCTGGGCTCGAAGGAGCATACCTACT 1135
| ||||| |||||||| ||||| || ||||| ||||| ||||| ||||||||||| ||||
Sbjct 1075 GCCGTGGGAATCCACTGTTTAAGTTTTTGTTCGAGCTTGGCTCAAAGGAGCATACTTACT 1134
Query 1136 ATGTCTGGAGGCTCTATTCCTTTGCTCAGGGTGATACCCTTCAAAGGTGGAGAACAGAGC 1195
| |||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct 1135 ACGTCTGGAGACTCTATTCCTTCGCTCAGGGTGATACACTTCAAAGGTGGAGGACAGAGC 1194
Query 1196 CGTATATCATGATAGCTGGAAGTGGAAGATGGATTCCGCCACCGCTGCCTGCAACTAGGA 1255
|||||||||||||| |||| |||||||||||||| |||||||| ||||||| ||||||||
Sbjct 1195 CGTATATCATGATAACTGGTAGTGGAAGATGGATACCGCCACCACTGCCTGTAACTAGGA 1254
Query 1256 GCCCAG-AGCATGGAAAAGAGTCTAG--AGGCACATACGCAGCAGGGAA-AAGCAGGTGC 1311
||||| |||| | |||||||||| | || |||||| ||||| ||||| || |||| |
Sbjct 1255 -CCCAGGAGCACGAAAAAGAGTCT-GCCAG-CACATATGCAGC-GGGAAGAACCAGGCGT 1310
Query 1312 ACGGAAGCTGAGCAA-ACTCTAACCGATTCC-CAAAGGGATGAATTTGAGGACATGTTGC 1369
|||||| |||| | ||||| ||||| || || |||||||| | |||||||||||||
Sbjct 1311 GCGGAAGTTGAG-AGGACTCTGACCGAC-CCTCAGAGGGATGAGTACGAGGACATGTTGC 1368
Query 1370 GCGCTCTAACTTTAGAAAGGAGTCAAATCAGAGAAGCTATGGGGTTT-GCTTTGGATAAC 1428
| ||||| ||||||||||||||||| || | |||||||||||| ||| ||||| |||||
Sbjct 1369 GTGCTCTTACTTTAGAAAGGAGTCAGATAAAAGAAGCTATGGG-TTTCGCTTTAGATAAT 1427
Query 1429 GCAGAGGCAGCTGGTGAGGTTGTTGAAGTTCTGACTGAGTCGTTGACCCTGAAAGAGACA 1488
||||| |||||||| ||||||||||||||| |||| ||||| |||| || |||||||||
Sbjct 1428 GCAGATGCAGCTGGAGAGGTTGTTGAAGTTTTGACGGAGTCCCTGACTCTAAAAGAGACA 1487
Query 1489 TCAATTCCCACTAAAGTTGCAAGACTCATGCTTGTGTCTGACATTATTCATAATAGCAGC 1548
|||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct 1488 TCAATTCCAACCAAAGTTGCTAGACTCATGCTTGTGTCTGATATTCTTCATAATAGCAGT 1547
Query 1549 GCTCGG-GTTAAAAATGCCTCTGCATACCGGACAAAATTCGAAGCAACAT-TACCTGATA 1606
|| | | ||||||||||| ||||||||||| || |||||||||||||| | |||| ||||
Sbjct 1548 GC-CAGTGTTAAAAATGCATCTGCATACCGAACCAAATTCGAAGCAAC-TCTACCCGATA 1605
Query 1607 TAATGGAAAGCTTCAACGATCTATACC-ACAGCGTA-CATGGAAGGATTACCGCGGAGGC 1664
|||||||||||||||| ||||| || | | ||| || | |||||| ||||| || |||||
Sbjct 1606 TAATGGAAAGCTTCAATGATCTGTATCGA-AGCATAAC-TGGAAGAATTACTGCTGAGGC 1663
Query 1665 TCTTAGAGAACGAGTACTAAAAGTACTGCAGGTATGGGCAGACTGGTTTCTCTTCTCAGA 1724
||| | |||||| || || ||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 1664 TCTAAAAGAACGGGTTCTCAAAGTACTGCAAGTATGGGCAGATTGGTTTCTCTTTTCAGA 1723
Query 1725 TGCATATATAAATGGGCTACGGGCCACATTTCTCCGGTCAAGAAACTTTGGTGTTACCTC 1784
||||| ||| |||| ||||| ||||||||||||| ||| || || ||||||||||||
Sbjct 1724 CGCATACATATATGGACTACGATCCACATTTCTCCGATCAGGAGTCTCTGGTGTTACCTC 1783
Query 1785 GTTTCATTCTATCTGTGGTGATGCGCCTGATATAGAGAAGAAAGGT--CTGATAGGCAAT 1842
|||||||||||||| |||||||| ||||| |||||||| ||| || | | | | ||||
Sbjct 1784 ATTTCATTCTATCTGCGGTGATGCACCTGAAATAGAGAACAAAAGTTAC-GCT-GACAAT 1841
Query 1843 ATGAACGATGCTGATAAGATCAATCAAGACGCTGCACTGGCAATGGGTGAAGGAGCTGCA 1902
|||| ||| || |||||||||| ||| |||||||||||||| || |||||||||||
Sbjct 1842 ATGAGTGATATTGGGAAGATCAATCCAGATGCTGCACTGGCAATAGGCAAAGGAGCTGCA 1901
Query 1903 AGGCAAGAGCTAATGAATCGACCAATTTCAGAGCTTGAAAGGCGCTGCAGACACAACGGT 1962
||||||||||| |||||| ||||||| | |||||||| ||||| ||| | ||||||||
Sbjct 1902 AGGCAAGAGCTGATGAATTTACCAATTGCTGAGCTTGAGAGGCGTTGCCGGCACAACGGA 1961
Query 1963 CTATCACTTTTAGGGGGTAGAG-AGATGATGGTTGCTCGGCTGGTATGTCT-GAAAGATG 2020
|| || ||| |||| ||||||| | ||||||||||| ||||| || | || ||| ||
Sbjct 1962 CTGTCTCTTGTAGGAGGTAGAGTA-ATGATGGTTGCCCGGCTACTAAGCCTTGAA-GACA 2019
Query 2021 CAGAGAAACAACGTGGCTATGAAGT-AGTAGATGAAAATGCAAAGTATC-GACAGGGAC- 2077
||||||||||||||||||||||| | ||| ||||||| | ||||| ||| | || ||
Sbjct 2020 CAGAGAAACAACGTGGCTATGAA-TCAGTGGATGAAATTTCAAAGCATCCG-CAAA-ACC 2076
Query 2078 ATTCAACTTGGGAAGAAGTTAACATTGAGCCTAAGCGGATGAA-AACCAGCTATGATAAA 2136
|||||||||||||||||||||| | ||||| ||| || || ||| ||||| | | |
Sbjct 2077 ATTCAACTTGGGAAGAAGTTAAGAGTGAGCGGGAGCATATCAAGAAC-AGCTACGC-AGA 2134
Query 2137 G-TGGAAACTGAA-GAGCCTGTGGATCTGGCCTCGACAATACCAATCCCACAGCCGGAGC 2194
| | |||| |||| |||||| | |||||||| |||||||||||||||||||||| ||||
Sbjct 2135 GGTTGAAA-TGAAAGAGCCTATTAATCTGGCCACGACAATACCAATCCCACAGCCTGAGC 2193
Query 2195 TAAAAGCCTTTGTA--AAGAAGGAGAA-AATTGACCTCAT-TCTACCAACTTCCAGATGG 2250
| ||||||||||| || ||| |||| ||| |||||||| | | ||| |||| | ||||
Sbjct 2194 TGAAAGCCTTTGTGGCAA-AAG-AGAAGAAT-GACCTCATAT-TGCCAGCTTCAAAATGG 2249
Query 2251 GCGAGAGAAGATGATGAAACTGATGATGAACaaaaaaaGAGCTACTCCTCTGGTAGCGAC 2310
|||||||| ||||| ||| |||||||||| ||||| | ||||| ||| || || || |||
Sbjct 2250 GCGAGAGACGATGACGAAGCTGATGATGAGCAAAAGAGGAGCTCCTCTTCAGGAAGTGAC 2309
Query 2311 AATGCTGGTGGAATAACTTTCAAGACCGATGAAGAGGATCTCAAAGCTGATCCAA-GTGT 2369
||| ||||||| |||||||||||| ||||||| ||||||||||| | || | ||||
Sbjct 2310 AATACTGGTGGGATAACTTTCAAGGCCGATGACGAGGATCTCAAGGGAAATG-ATTGTGT 2368
Query 2370 TCGTGTCCAGCCTGAAAATGAAATCGACGTGGAGCAAAGACAAAAGCTTAGACACATAGA 2429
|||| ||| ||||| |||| ||| |||| ||| ||||||||||||| ||||| ||||||
Sbjct 2369 CCGTGCCCAACCTGACAATGGAATGGACGAGGAACAAAGACAAAAGCGTAGACGCATAGA 2428
Query 2430 -GATTGCTTTGATAGAGTATCGAGAATCTCTTGAGGAACAAGGGATGAAAAACTCTGAGG 2488
| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||
Sbjct 2429 AG-TTGCTTTGATAGAGTATCGTGAAACTCTTGAGGAACAGGGGATGAAAAACTCCGAGG 2487
Query 2489 AGATAGAAAGAAAAGTTGCTATCCACCGAAAGAGGCTTGAAGCTGAT---GGCTTATCAG 2545
||||||| |||||||| | ||| || ||||||||||||||| |||| ||||||||
Sbjct 2488 AGATAGAGAGAAAAGTAGAAATCAACAGAAAGAGGCTTGAAGTTGATTATGGCTTATCC- 2546
Query 2546 GAAATC-A--GAGAGTATT-GCC--C-GAGA--AA--A--G-G--GA-G-A-A-GCGTGA 2585
||| | | ||| | | | | || | || | | | || | | | ||||||
Sbjct 2547 -AAACCTAACGAGGGCAACAGAAATCAGAAATCAATCATAGAGCTGAAGGATAAGCGTGA 2605
Query 2586 AGATTCT-AGAGATTCATCTAGAAAGAGAAACCGAAGTGAGAGCCAGAATCGAAGCCAGA 2644
|||||| | ||| || |||| |||| | |||| | || | ||||| | ||| |
Sbjct 2606 AGATTCGCA-AGAATCTTCTAAAAAGCGGCACCGTGGGGAAAACCAGA---G---CCAAA 2658
Query 2645 GTCCACCACAGAAATCATTAACCAGAGAAAGGGTGAGAGATCATGACTTGGACAAAGACA 2704
|||| |||| |||||||| |||||| || |||| ||||||||||||||||| | |||||
Sbjct 2659 GTCCGCCACGGAAATCATCAACCAGGGAGAGGGAAAGAGATCATGACTTGGAGAGAGACA 2718
Query 2705 G--ACACAGAGA--CA--GAGATAG-GCA-A--CAACATGATTTGGACAAGGACCGAAAA 2754
| ||| ||||| || |||| || | | | |||||||||||| ||| ||| ||| |
Sbjct 2719 GGGACAGAGAGAGACACAGAGACAGAG-ATAGGCAACATGATTTGAACAGGGATCGAGAC 2777
Query 2755 CGAAGAGCAAAGAGCTCAAGTCGCGAGAGAGACGATCATGATAGAAGCAGAGAGCGAGAT 2814
||| | | |||||| ||||| | ||| |||| |||||||||||||||| |||| ||||
Sbjct 2778 CGACGTGAAAAGAGTTCAAGCCACGATCGAGATGATCATGATAGAAGCAAAGAGAGAGAC 2837
Query 2815 AGAGATTGGCGCAGACGAGGCATGAGATGA-GATGATTGTT 2854
|| ||||||||||||||||||| ||||||| |||||| |||
Sbjct 2838 AGGGATTGGCGCAGACGAGGCACGAGATGATGATGAT-GTT 2877
> Ahg325618 jgi|Araly1|325618|fgenesh1_pm.C_scaffold_6000838
Length=2760
Score = 1668 bits (903), Expect = 0.0
Identities = 1088/1176 (93%), Gaps = 18/1176 (2%)
Strand=Plus/Plus
Query 1672 GAACGAGTACTAAAAGTACTGCAGGTATGGGCAGACTGGTTTCTCTTCTCAGATGCATAT 1731
||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 1600 GAACGAGTACTCAAAGTACTGCAGGTATGGGCAGATTGGTTTCTTTTTTCAGATGCATAT 1659
Query 1732 ATAAATGGGCTACGGGCCACATTTCTCCGGTCAAGAAACTT-TGGTGTTACCTCGTTTCA 1790
||||||||||||||||| || |||||| |||| |||| || ||||||||||||||||||
Sbjct 1660 ATAAATGGGCTACGGGCTACGTTTCTCAGGTCGGGAAA-TTCTGGTGTTACCTCGTTTCA 1718
Query 1791 TTCTATCTGTGGTGATGCGCCTGATATAGAGAAGAAAGGTCTGATAGGCAATATGAACGA 1850
||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| |
Sbjct 1719 TTCTATCTGTGGTGATGCGCCTGGTATAGAGAAGAAAGGTCTCATAGGAAATATGAACAA 1778
Query 1851 TGCTGATAAGATCAATCAAGACGCTGCACTGGCAATGGGTGAAGGAGCTGCAAGGCAAGA 1910
|||||||||| | ||||||||| |||||||||||||||| |||||| ||||||||||||
Sbjct 1779 TGCTGATAAGTTTAATCAAGACACTGCACTGGCAATGGGCCAAGGAGATGCAAGGCAAGA 1838
Query 1911 GCTAATGAATCGACCAATTTCAGAGCTTGAAAGGCGCTGCAGACACAACGGTCTATCACT 1970
||| ||||||| ||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct 1839 GCTGATGAATCTACCAATTTCTGAGCTTGAGAGACGATGCAGACACAACGGTCTGTCACT 1898
Query 1971 TTTAGGGGGTAGAGAGATGATGGTTGCTCGGCTGGTATGTCTGAAAGATGCAGAGAAACA 2030
| ||||||||| |||||||||||||||||||||| || | ||| ||||||||||||||||
Sbjct 1899 TGTAGGGGGTATAGAGATGATGGTTGCTCGGCTGCTAAGCCTGGAAGATGCAGAGAAACA 1958
Query 2031 ACGTGGCTATGAAGTAGTAGATGAAAATGCAAAGTATCGACAGGGACATTCAACTTGGGA 2090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1959 ACGTGGCTATGAAGTAGTAGATGAAAATGCAAAGTATCGACAGGGACATTCAACTTGGGA 2018
Query 2091 AGAAGTTAACATTGAGCCTAAGCGGATGAAAACCAGCTATGATAAAGTGGAAACTGAAGA 2150
||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||
Sbjct 2019 AGAAGTTAACATTGAGCCTAAGCAGATGAAAACCAGCTATTATAAAGTTGAAACTAAAGA 2078
Query 2151 GCCTGTGGATCTGGCCTCGACAATACCAATCCCACAGCCGGAGCTAAAAGCCTTTGT-AA 2209
||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||| ||
Sbjct 2079 GCCTGTGAATCTGGCCTCGAGAATTCCAATCCCCCAGCCGGAGCTAAAAGCCTTTGTGAA 2138
Query 2210 AGAAGGAGAAAATTGACCTCAT-TCTACCAACTTCCAGATGGGCGAGAGAAGATGATGAA 2268
| |||||||||| ||||||||| | | ||||||||||||||||| | ||| || |
Sbjct 2139 A-AAGGAGAAAAATGACCTCATAT-TGCCAACTTCCAGATGGGC----G-AGA-GA-G-- 2187
Query 2269 ACTGATGATGAACaaaaaaaGAGCTACTCCTCTGGTAGCGACAATGCTGGTGGAATAACT 2328
||||||||||||||||||||||||||||||||||| ||||||||||| | | |||||
Sbjct 2188 ---GATGATGAACAAAAAAAGAGCTACTCCTCTGGTAGTGACAATGCTGGCGTATTAACT 2244
Query 2329 TTCAAGACCGATGAAGAGGATCTCAAAGCTGATCCAAGTGTTCGTGTCCAGCCTGAAAAT 2388
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 2245 TTCAAGACTGATGAAGAGGATCTCAAGGCTGATCCAAGTATTCGTGTCCAGCCTGAAAAT 2304
Query 2389 GAAATCGACGTGGAGCAAAGACAAAAGCTTAGACACATAGAGATTGCTTTGATAGAGTAT 2448
|||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||
Sbjct 2305 GAAATCGACGAGGAGCAAAGACAAAAGCTTAAACGCATAGAGGTTGCTTTGATAGAGTAT 2364
Query 2449 CGAGAATCTCTTGAGGAACAAGGGATGAAAAACTCTGAGGAGATAGAAAGAAAAGTTGCT 2508
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 2365 CGAGAATCTCTTGAGGAACAGGGGATGAAAAACTCTGAGGAGATAGAAAGAAAAGTTACG 2424
Query 2509 ATCCACCGAAAGAGGCTTGAAGCTGATGGCTTATCAGGAAATCAGAGAGTATTGCCCGAG 2568
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||
Sbjct 2425 ATCCACCGAAAGAGGCTTGAAGCTGATGTCTTAAAAGGAAATCAGAGAGTATTGCCAGAG 2484
Query 2569 AAAAGGGAGAAGCGTGAAGATTCTAGAGATTCATCTAGAAAGAGAAACCGAAGTGAGAGC 2628
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2485 AAAAGGGAGAAGCGTGAAGATTCTAGAGATTCATCTAGAAAGAGATACCGAAGTGAGAGC 2544
Query 2629 CAGAATCGAAGCCAGAGTCCACCACAGAAATCATTAACCAGAGAAAGGGTGAGAGATCAT 2688
||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct 2545 CAGAATCGAAGCCAGAGGCCACCACAAAAATTATTAACCAGAGAAAGGGTGAGAGATCAT 2604
Query 2689 GACTTGGACAAAGACAGACACAGAGACAGAGATAGGCAACAACATGATTTGGACAAGGAC 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2605 GACTTGGACAAAGACAGACACAGAGACAGAGATAGGCAACAACATGATTTGGACAAGGAC 2664
Query 2749 CGAAAACGAAGAGCAAAGAGCTCAAGTCGCGAGAGAGACGATCATGATAGAAGCAGAGAG 2808
||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 2665 CGAGAACGAAGAGCAAAGAGCTCAAGTCATGAGAGAGACGATCATGATATAAGCAGAGAG 2724
Query 2809 CGAGATAGAGATTGGCGCAGACGAGGCATGAGATGA 2844
||||| ||||||||||| ||||||||||||||||||
Sbjct 2725 CGAGACAGAGATTGGCGTAGACGAGGCATGAGATGA 2760
Score = 1378 bits (746), Expect = 0.0
Identities = 818/853 (96%), Gaps = 4/853 (0%)
Strand=Plus/Plus
Query 819 ACAAGCACTACCAGCTCCACCTCCTGGGCATATGGCAATCCGGAGTAAGGAGGGCTGCAA 878
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 696 ACAAGCACTACCAGCTCCTCCTCCTGGGCATATGGCAATCCGGAGTAAGGAGGGCTGCAA 755
Query 879 TTTAATTTTTTCTGTTACATCGGGTCCACCAATGAA-TTCCGTTCCAAATCAAAATTCTG 937
|||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| |
Sbjct 756 TTTAATTTTTTCTGGTACATCGGGTCCACCAAT-AACTTCCGTTCCAAATCAAAATTCCG 814
Query 938 AGCTGGTTCTTACCCCAAATGTTCCGGATATCACTGTTATTTCTCCTGAGGACGAGCACC 997
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 815 AGCTGGTTCTTACCCCAAATGTTCCGGATATCACTGTTGTTTCTCCTGAGGACGAGCACC 874
Query 998 TCAAACAGATTATAGATACAATGGCCCTTAATGTACTGGACGGTGGATGCGCTTTTGAAC 1057
||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 875 TCAAACATATTATTGATACAATGGCCCTTAATGTACTGGATGGTGGCTGCGCTTTTGAAC 934
Query 1058 AAGCTATTATGGAGAGGGGGCGTGGTAATCCACTTTTTAACTTCTTGTTTGAGCTGGGCT 1117
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 935 AAGCAATTATGGAGAGGGGGCGTGGTAATCCACTTTTTAACTTCTTGTTTGAGCTGGGCT 994
Query 1118 CGAAGGAGCATACCTACTATGTCTGGAGGCTCTATTCCTTTGCTCAGGGTGATACCCTTC 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 995 CGAAGGAGCATACCTACTATGTCTGGAGGCTCTATTCCTTTGCTCAGGGTGATACCCTTC 1054
Query 1178 AAAGGTGGAGAACAGAGCCGTATATCATGATAGCTGGAAGTGGAAGATGGATTCCGCCAC 1237
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1055 AAAGATGGAGAACAGAGCCGTACATCATGATAGCTGGAAGTGGAAGATGGATTCCCCCAC 1114
Query 1238 CGCTGCCTGCAACTAGGAGCCCAGAGCATGGAAAAGAGTCTAGAGGCACATACGCAGCAG 1297
| |||||||||||||| || |||||||||||||||||||||| | |||||||||||||||
Sbjct 1115 CTCTGCCTGCAACTAGAAGTCCAGAGCATGGAAAAGAGTCTACATGCACATACGCAGCAG 1174
Query 1298 GGAAAAGCAGGTGCACGGAAGCTGAGCAAACTCTAACCGATTCCCAAAGGGATGAATTTG 1357
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175 GGAAAAGCAGGAGCATGGAAGCTGAGCAAACTCTAACCGATTCCCAAAGGGATGAATTTG 1234
Query 1358 AGGACATGTTGCGCGCTCTAACTTTAGAAAGGAGTCAAATCAGAGAAGCTATGGGGTTTG 1417
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1235 AGAACATGTTGCGCGCTCTAACTTTAGAAAGGAGTCAAATCAAAGAAGCTATGGGGTTTG 1294
Query 1418 CTTTGGATAACGCAGAGGCAGCTGGTGAGGTTGTTGAAGTTCTGACTGAGTCGTTGACCC 1477
|||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 1295 CTTTGGATAACGCAGATGCAGCTGGAGAGGTTGTTGAAGTTCTGACAGAGTCATTGACCC 1354
Query 1478 TGAAAGAGACATCAATTCCCACTAAAGTTGCAAGACTCATGCTTGTGTCTGACATTATTC 1537
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1355 TGAAAGAGACATCGATTCCCACTAAAGTTGCAAGACTCATGCTTGTGTCTGACATTCTTC 1414
Query 1538 ATAATAGCAGCGCTCGGGTTAAAAATGCCTCTGCATACCGGACAAAATTCGAAGCAACAT 1597
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1415 ATAATAGCAGCGCTCGTGTTAAAAATGCCTCTGCATACCGGACAAAATTCGAAGCAACAT 1474
Query 1598 TACCTGATATAATGGAAAGCTTCAACGATCTATACCACAGCGTA-CATGGAAGGATTACC 1656
|||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||||||||
Sbjct 1475 TACCCGATATAATGGAAAGCTTCAACGATCTATACCGCAGCGTAAC-TGGCAGGATTACC 1533
Query 1657 GCGGAGGCTCTTA 1669
|||||||||||||
Sbjct 1534 GCGGAGGCTCTTA 1546
Score = 736 bits (398), Expect = 0.0
Identities = 464/495 (94%), Gaps = 8/495 (2%)
Strand=Plus/Plus
Query 266 GGTATGTTCCCTCCTTTCTCCCCCCACCATTGGCATCTAAGGGTAAAGGACCAGAGAATA 325
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 187 GGTATGTTCCCTCCTTTCTCCCCCCACCATTGGCATCTAAGGGTAAAGAACCAGAGAAT- 245
Query 326 AGAGGGATGAAGAGAGATCAAAGGAGATG-GAAAAGGGAAAGACTCGAAACATAGATCAT 384
| ||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||||
Sbjct 246 A-AGGGAAGAAGAGAGATCAAAGGAGA-GAGAAAAGGTAAAGACTCGAAACATAGATCAT 303
Query 385 TTTGTGGAGGAGCTCAAGCGTGAACAAGAAATAAGAGAAAGGCGAAACCAGGATCGCGAG 444
||| ||||||| | || |||||||||||||| ||||||||||||||| |||||| ||||
Sbjct 304 TTTATGGAGGATTTGAAACGTGAACAAGAAATGAGAGAAAGGCGAAACAAGGATCACGAG 363
Query 445 AATTCCCGTGACCATAATAGTGATAACACGTCATCTAGCCGCTTTGATGAGCTACCTGAT 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 AATTCCCGTGACCATAATAGTGATAACACGTCATCTAGCCGCTTTGATGAGCTACCTGAT 423
Query 505 TATTTTGATCCCAGTGGAAGGTTAGGGTCATTGGACGATGGTGACCCACAAACTACAAAT 564
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 424 GATTTTGATCCCAGTGGAAGGTTAGGGTCATTGGAAGATGGTGACCCACAAACTACAAAT 483
Query 565 CTATATGTTGTGAATCTTTCATCTAAGGTTGATGAAAATTTTCTTCTGCGGACTTTTGGA 624
|||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 484 CTATATGTTGGGAATCTTTCAGCTAAGGTTGATGAAAATTTTATTCTGCGGACTTTTGGA 543
Query 625 AGATTTGGGCCAATAGCTAGTGTTAAAATTATGTGGCCAAGAACAGAGGAGGAGAAAAGG 684
|||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct 544 AGATTTGGGCGAATAGCTAGTGTTAAAATTATGTGGCCAATAACGGAGGAAGAGAAAAGG 603
Query 685 CGAGAAAGGCATTGTGGCTTTGTTGCTTTCATGAATAGAGCCGACGGAG-AAGCTGCAAA 743
|||||||| ||||| ||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct 604 CGAGAAAGACATTGGGGCTTTGTTGCTTTCATGAATAGAGTCGACGG-GCAAGCTGCAAA 662
Query 744 AGA-GAAAATGCAAG 757
||| |||| ||||||
Sbjct 663 AGATGAAA-TGCAAG 676
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116632330190
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5