BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G11230.1
Length=1056
Score E
Sequences producing significant alignments: (Bits) Value
Ahg940598 jgi|Araly1|940598|scaffold_601142.1 1676 0.0
Ahg942103 jgi|Araly1|942103|scaffold_602647.1 948 0.0
Ahg932703 jgi|Araly1|932703|scaffold_400691.1 826 0.0
Ahg944722 jgi|Araly1|944722|scaffold_700951.1 797 0.0
> Ahg940598 jgi|Araly1|940598|scaffold_601142.1
Length=1095
Score = 1676 bits (907), Expect = 0.0
Identities = 1008/1057 (95%), Gaps = 5/1057 (0%)
Strand=Plus/Plus
Query 1 ATGGGGAAAGGTGGCGCACTAAGCGAAAGCGTGATAAAGAACATCGTTCTCTCATACAGC 60
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 22 ATGGGGAAAGGCGGCGCACTAAGCGAAAGCGTGATAAAGAACATTGTTCTCTCATACAGC 81
Query 61 TACGTAGCGATATGGATCTTCTTAAGCTTCACAGTAATTGTCTACAACAAATACATCCTC 120
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 82 TACGTAGCGATATGGATCTTCTTAAGCTTCACGGTAATCGTCTACAACAAATACATCCTC 141
Query 121 GACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCTTT 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 142 GACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCTTT 201
Query 181 TGTTCAACCCTAGCTTTTCTCATCATCAAGGTTTTCAAATTCGTCGAGCCAGTTAAAATG 240
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 202 TGCTCAACCCTAGCTTTTCTCATCATCAAGGTTTTCAAATTCGTCGAGCCTGTTAAAATG 261
Query 241 ACTCGCGAGACTTACCTGAGATCCGTCGTACCGATCGGTGCTTTGTACGCTCTCTCACTC 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 262 ACTCGCGAGACTTACCTGAGATCCGTCGTCCCGATCGGTGCTTTGTACGCTCTATCACTC 321
Query 301 TGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAAAGCT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 322 TGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAAAGCT 381
Query 361 CTCATGCCTGTAGCTGTTTACTCAATCGGTGTTCTGTTTAAAAAGGAAGGATTCAAATCT 420
|| |||||||| ||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct 382 CTGATGCCTGTCGCTGTTTACTCGATCGGTGTTCTGTTCAAGAAGGAAGGTTTCAAATCT 441
Query 421 GATACTATGATGAACATGTTATCGATTTCGTTTGGTGTTGCGATTGCTGCTTATGGTGAA 480
|||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||
Sbjct 442 GATACTATGATGAATATGCTCTCGATTTCGTTTGGTGTTGCGATTGCTGCTTATGGAGAA 501
Query 481 GCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGAAGCTACT 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 502 GCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGAAGCCACT 561
Query 541 CGTTTGGTTTTGATTCAGATCTTG-TTAGGAGATAAAGGGATTAAGCTTAATCCCATTAC 599
||||||||||||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct 562 CGTTTGGTTTTGATTCAGATCTTACTTGGG-GATAAAGGGATTAAGCTTAATCCCATTAC 620
Query 600 TTCGTTATATTACGTTGCTCCTTGTTGTTTGGCCTTCTTGTTTATTCCATGGATCTACGT 659
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 621 TTCGTTATATTACGTTGCTCCTTGTTGCTTAGCTTTCTTGTTTATTCCATGGATCTACGT 680
Query 660 TGAGTTTCCTGTTCTTAGAGATACGTCTAGCTTCCACTTGGATTACGCAATTTTCGGAGC 719
||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct 681 TGAGTTTCCGGTTCTTAGAGATACGTCTAGCTTTCACTTGGATTACGCGGTTTTCGGGGC 740
Query 720 GAATTCGTTTTGTGCGTTTGCGTTGAATCTTGCTGTGTTTCTTTTGGTTGGGAAGACATC 779
||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 741 GAATTCGTTCTGTGCGTTTGCGTTGAATCTTGCTGTGTTCCTTTTGGTTGGGAAAACCTC 800
Query 780 TGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGATTGCTTTCTCATG 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 801 TGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGATTGCTTTCTCTTG 860
Query 840 GTCTGTGATTAAGGATACTGTGACTCCTATTAATCTTTTCGGGTACGGGATTGCGTTCTT 899
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 861 GTCTGTGATTAAGGATACTGTGACTCCTATTAACCTTTTCGGGTACGGGATTGCGTTTTT 920
Query 900 GGGAGTTGCGTATTATAATCACGCCAAGTTACAGGCTTTGAAGGCTAAAGAGGAGGAGAA 959
||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct 921 GGGAGTTGCGTATTACAACCACGCGAAGTTACAGGCCTTGAAGGCTAAAGAGGAGGAGAA 980
Query 960 GAAGAAGATTCAGCAAGCTGATGAGGAGAGTGGTCGGTTGCTTGAAGAGAGGGAAGGTGA 1019
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 981 GAAGAAGGTTCAGCAAGCTGATGAGGAGAGTGGTCGGTTGCTTGAAGAGAGGGAAGGTGA 1040
Query 1020 TGTTGAAGGTAAGAAGAATGATCAGTCTGGTAATTAA 1056
|| ||||||||||||||||| |||||||||||||
Sbjct 1041 TGGAGAAGGTAAGAAGAATGA---GTCTGGTAATTAA 1074
> Ahg942103 jgi|Araly1|942103|scaffold_602647.1
Length=1090
Score = 948 bits (513), Expect = 0.0
Identities = 865/1032 (84%), Gaps = 35/1032 (3%)
Strand=Plus/Plus
Query 1 ATGGGGAAAGGTGGCGCACTAAGCGAAAGCGTGATAAAGAACATCGTTC-TCTCATACAG 59
|||||||||||||| ||||||||||| | ||||| |||||||| || |||| ||||
Sbjct 21 ATGGGGAAAGGTGGATCACTAAGCGAAGGTGTGATTAAGAACAT-AATCATCTCCTACA- 78
Query 60 C-TACGTAGCGATATGGATCTTCTTAAGCTTCACAGTAATTGTCTACAACAAATACATCC 118
| |||||||| |||||||||||| |||||||||| || || |||||||||||||||||||
Sbjct 79 CATACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATACATCC 138
Query 119 TCGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCT 178
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 139 TCGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCT 198
Query 179 TTTGTTCAACCCTAGCTTTTCT-CATCATCAAGGTTTTCAAATTCGTCGAGCCAGT-TAA 236
|||| ||||||||||||||||| | |||||||||| |||||||| || || || || | |
Sbjct 199 TTTGCTCAACCCTAGCTTTTCTTC-TCATCAAGGTCTTCAAATTTGTTGAACCGGTCTCA 257
Query 237 AATGACTCGCGAGACTTACCTGAGATCCGTCGTACCGATCGGTGCTTTGTACGCTCTCTC 296
| || | || || ||||| || ||||||||||| |||||||| || ||||| | |||||
Sbjct 258 A-TGTCACGTGACACTTATCTCAGATCCGTCGTCCCGATCGGCGCGTTGTATTCACTCTC 316
Query 297 ACTCTGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAA 356
|| ||| | || || || || ||||||||||| || |||||||| || || ||||| ||
Sbjct 317 TCTTTGGCTCTCTAACTCAGCCTACATTTACCTCTCTGTCTCCTTCATTCAAATGCTCAA 376
Query 357 AGC-TCTCATGCCTGTAGCTGTTTACTCAATCGGTGTTCTGTTTAA-AAAGGAAGGATTC 414
||| | | ||||| || || ||||| ||||| || || || || || |||| | || |||
Sbjct 377 AGCGT-TAATGCCAGTCGCGGTTTATTCAATTGGCGTGCTCTTCAAGAAAG-AGGGTTTC 434
Query 415 AAATCTGATACTATGATGAACATGTTATCGATTTCGTTTGGTGTTGCGATTGCTGCTTAT 474
|||||||| || ||||| |||||| ||||||| || |||||||| || ||||||||||||
Sbjct 435 AAATCTGAGACAATGATTAACATGCTATCGATCTCATTTGGTGTAGCCATTGCTGCTTAT 494
Query 475 GGTGAAGCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGAA 534
|||||| |||| || |||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 495 GGTGAATCTAGATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCGGTTGCTTTCGAG 554
Query 535 GCTACTCGTTTGGTTTTGATTCAGATCTTG-TTAGGAGATAAAGGGATTAAGCTT-AATC 592
|| || || ||||| |||||||||||||| ||| |||||| || | | || ||||
Sbjct 555 GCGACACGGTTGGTAATGATTCAGATCTTGCTTACTTC-TAAAGGAATCACG-TTGAATC 612
Query 593 CCATTACTTCG-TTATATTACGTTGCTCCTTGTTGTTTGGCCTTCTTGTTTATTCCATGG 651
| || ||||| || |||||||||||||||||||| || || ||||||||||| || |||
Sbjct 613 CAATCACTTCTCTT-TATTACGTTGCTCCTTGTTGCTTAGCTTTCTTGTTTATCCCTTGG 671
Query 652 ATC-TACGTTGAGTTTCCTGTTCTT-AGAGATACGTCTAGCTTCCACTTGGATTACG-CA 708
|| | ||| |||||||| | |||| |||||||| ||||||||||| || |||||| ||
Sbjct 672 ATTGT-CGTGGAGTTTCC-GATCTTGAGAGATACCTCTAGCTTCCATTTCGATTACCTCA 729
Query 709 ATTTTCGG-AGCGAATTCGTTTTGTGCGTTTGCGTTGAATCTTGCTGTGTTTCTTTTGGT 767
||||||| | ||||||| |||||||||||||| ||||||||||||||||||||| ||||
Sbjct 730 -TTTTCGGGA-CGAATTCTTTTTGTGCGTTTGCTTTGAATCTTGCTGTGTTTCTTCTGGT 787
Query 768 TGGGAAGACATCTGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGAT 827
|||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 788 TGGGAAAACCTCTGCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGAT 847
Query 828 TGC-TTTCTCATGGTCTGTGATTAAGGATACTGTGACTCCTATTAATCTTTTCGGGTACG 886
|| ||| || ||||| || |||||||| ||||||||||||||||||||||| || || |
Sbjct 848 CGCCTTT-TCGTGGTCGGTCATTAAGGACACTGTGACTCCTATTAATCTTTTTGGTTATG 906
Query 887 GGATTGCGTTCTTGGGAGTTGCGTATTATAATCACGCCAAGTTACAGGCTTTGAAGGCTA 946
||||||| |||||||| |||||||| ||||||||||| |||||||| || ||||||||||
Sbjct 907 GGATTGCTTTCTTGGGTGTTGCGTACTATAATCACGCGAAGTTACAAGCATTGAAGGCTA 966
Query 947 AAGAGGAGGAGAAGAAGAAGATTCAGCAAGCTGATGAGGAGAGTGGTCGG-TTGCTTG-A 1004
|||| | |||||| | | ||||||| |||||| |||||||||||| || ||| |
Sbjct 967 AAGATGCTCAGAAGACT--GCT-CAGCAAGTTGATGAAGAGAGTGGTCGGCTT--TTGGA 1021
Query 1005 AGAGAGGGAAGG 1016
||| ||||||||
Sbjct 1022 AGAAAGGGAAGG 1033
> Ahg932703 jgi|Araly1|932703|scaffold_400691.1
Length=1087
Score = 826 bits (447), Expect = 0.0
Identities = 850/1040 (82%), Gaps = 45/1040 (4%)
Strand=Plus/Plus
Query 1 ATGGGGAAAGGTGGCGCACTAAGCGAAAGCGTGATAAAGAACATCGTTCTCTCATACAGC 60
|||||||||||| | ||||| ||| | |||||||| || ||| | || ||||||| |
Sbjct 24 ATGGGGAAAGGTCGTGCACTTTCCGACGGAGTGATAAAAAAGATCATCCTTTCATACACC 83
Query 61 TACGTAGCGATATGGATCTTCTTAAGCTTCACAGTAATTGTCTACAACAAATACATCCTC 120
|| || || || ||||||||| | ||||||||||| || |||||||||||||||||||||
Sbjct 84 TATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTCATCGTCTACAACAAATACATCCTC 143
Query 121 GACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCTTT 180
|||||||||||||| |||||||||| ||| || | ||||| ||||| |||||| |||
Sbjct 144 GACAAGAAGATGTATAATTGGCCATACCCAATAACTCTCACCATGATTCACATGGGTTTT 203
Query 181 TGTTCAACCCTAGCT-T--TTCTCATCATCAAGGTTTTCAAATTCGTCGAGCCAGTTAAA 237
|| || || ||||| | ||||||||| ||| | |||||| |||||||||||||| |
Sbjct 204 TGCTCTTCCTTAGCTGTGATTCTCATCA--AAG-TCTTCAAAGTCGTCGAGCCAGTTTCA 260
Query 238 ATGACTCGCGAGACTTACCTGAGATCCGTCGTACCGATCGGTGCTTTGTACGCTCTCTCA 297
||| | ||||||||||| || |||||||||||||| ||||| || |||||| | |||||
Sbjct 261 ATGTCACGCGAGACTTATCTCAGATCCGTCGTACCAATCGGCGCGTTGTACTCACTCTCT 320
Query 298 CTCTGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAAA 357
|| |||||||| || || |||||||| ||||| || || ||||| || || ||||| |||
Sbjct 321 CTTTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTATCCTTCATTCAAATGCTCAAA 380
Query 358 GCTCTCATGCCTGTAGCTGTTTACTCAATCGGTGTTCTGTTTAA-AAAGGAAGGA-TT-C 414
||||| |||||||||||||||||||||||||| ||| |||| || |||| | | | || |
Sbjct 381 GCTCTAATGCCTGTAGCTGTTTACTCAATCGGAGTTTTGTTAAAGAAAG-A-G-ACTTTC 437
Query 415 AAATCTGATACTATGA-TGAACATGTTATCGATTTCGTTTGGTGTTGCGATTGCTGCTTA 473
|||||| | ||||||| | |||||| | ||||| |||||||||||||| |||||||||||
Sbjct 438 AAATCTCAGACTATGACT-AACATGCTCTCGATCTCGTTTGGTGTTGCTATTGCTGCTTA 496
Query 474 TGGTGAAGCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGA 533
||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 497 TGGTGAAGCTAAGTTTGATGGTTGGGGTGTTTTTCTTCAGCTTGGTGCTGTTGCTTTTGA 556
Query 534 AGCTACTCGTTTGGTTTTGATTCAGATCTTG-TTAGGAGATAAAGGGATTAAGCTTAATC 592
|||||| | ||||||||||||||||||||| ||| |||||| || || |||||||
Sbjct 557 AGCTACAAGGTTGGTTTTGATTCAGATCTTGCTTACTTC-TAAAGGAATCAATCTTAATC 615
Query 593 CCATTACTTCGT-TATATTACGTTGCTCCTTGTTGTTTGGCCTTCTTGTTTATTCCATGG 651
| || ||||| | | ||||||||||||||||||||||||| ||| | | | | || |||
Sbjct 616 CAATCACTTC-TCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTCCTCTCTGTGCCTTGG 674
Query 652 ATCTACGTTGAGTTTCCTGTTCTTAGAGATACGTCTAGCTTCCACTTGGATTACGCAAT- 710
|||| || |||||||| |||||||||||||| || || ||||| || |||| | ||
Sbjct 675 ATCTTTGTGGAGTTTCCAGTTCTTAGAGATACTTCGAGTTTCCATTTCGATTTCTTGATC 734
Query 711 TTTCGGAGCGAATTC-GTTTTGTGCGTTTGCGTTGAATCTTGCTGTGTTTCTTT-TGGTT 768
||| ||| | ||||| |||| |||||||||| ||||||||||||||||| ||| | |||
Sbjct 735 TTT-GGAACCAATTCTGTTT-GTGCGTTTGCTTTGAATCTTGCTGTGTT-CTTGCTCGTT 791
Query 769 GGGAAGACATCTGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGATT 828
||||| || ||||||||||| |||||||| |||||||| ||||| |||||||||||||||
Sbjct 792 GGGAAAACCTCTGCTTTGACAATGAATGTGGCTGGTGTTGTTAAAGATTGGCTCTTGATT 851
Query 829 GCTTTCTCATGGTCTGTGATTAAGGATACTGTGACTCCTATTAATCT-TTTCGGGTACGG 887
|| ||||| ||||| ||||||||||| || || || || || ||||| ||| || || ||
Sbjct 852 GCATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCGATCAATCTGTTT-GGTTATGG 910
Query 888 GA-TTGCGTTCTTGGGAGTTGCG-TATTATAATCAC-GCCAAGTTACAGGCTTTGAAGGC 944
| |||| || ||||| |||| | ||||| |||||| || ||||||||||| ||||| ||
Sbjct 911 -ACTTGCCTTTTTGGGTGTTG-GATATTACAATCACTGC-AAGTTACAGGCGTTGAAAGC 967
Query 945 TAAAGAGG-AGGAGAAGAAGAAGATTCAG-CAAGCTGATGAGGAGAG-TGGTCGG-TTGC 1000
|||||| | | |||||||| | ||||| |||| ||||||||| || ||| | ||
Sbjct 968 TAAAGATGCAC-AGAAGAAG--G-TTCAGGCAAG-TGATGAGGA-AGCTGGGAAGCTT-- 1019
Query 1001 TTG-AAGAGAGGGAAGGTGA 1019
||| ||||||||||| ||||
Sbjct 1020 TTGGAAGAGAGGGAAAGTGA 1039
> Ahg944722 jgi|Araly1|944722|scaffold_700951.1
Length=1093
Score = 797 bits (431), Expect = 0.0
Identities = 840/1036 (81%), Gaps = 34/1036 (3%)
Strand=Plus/Plus
Query 1 ATGGGGAAAGGTGGCGCACTAAGCGAAAGCGTGATAAAGAACATCGTTCTCTCATACAGC 60
||||| ||||| || || || ||||| | || || ||||| ||| | ||||| |||| |
Sbjct 21 ATGGGAAAAGGCGGTGCGCTTAGCGATGGAGTCATCAAGAAGATCCTCCTCTCCTACACC 80
Query 61 TACGTAGCGATATGGATCTTCTTAAGCTTCACAGTAATTGTCTACAACAAATACATCCTC 120
||||| ||||| ||||||||| | |||||||| || || |||||||||||||||||||||
Sbjct 81 TACGTCGCGATCTGGATCTTCCTCAGCTTCACCGTCATCGTCTACAACAAATACATCCTC 140
Query 121 GACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCTTT 180
||||||||||||||||||||||| || |||||| ||||||| |||||||||||| | |||
Sbjct 141 GACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACCATGATCCACATGGCTTTT 200
Query 181 TGTTCAACCCTAGCTTTTC-TCATCATCAAGGTTTTCAAATTCGTCGAGCCAGTTAAAAT 239
|| || |||| || | | || ||||||| || |||||| |||||||||| ||| |||
Sbjct 201 TGCTCTTCCCTCGCCGT-CATCCTCATCAAAGTCTTCAAAATCGTCGAGCCTGTTTCAAT 259
Query 240 GACTCGCGAGACTTACCTGAGATCCGTCGTACCGATCGGTGCTTTGTACGCTCTCTCACT 299
| | || ||||||||| | ||||| || || |||||||||||||||||| | ||||| ||
Sbjct 260 GTCACGAGAGACTTACATCAGATCTGTAGTCCCGATCGGTGCTTTGTACTCGCTCTCTCT 319
Query 300 CTGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAAAGC 359
|||| | || |||||||||||||||||||| || |||||||| || ||||||||||||||
Sbjct 320 CTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTCATTCAGATGCTTAAAGC 379
Query 360 TCTCATGCCTGTAGCTGTTTACTCAATCGGTGTTCTGT-TTAA-AAAGGAAGGATTCAAA 417
|| |||||||| ||||||||||||||||| || || | |||| |||| || ||||||
Sbjct 380 CCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCT-TCTTAAGAAAG-AATCTTTCAAA 437
Query 418 TCTGATACTATGA-TGAACATGTTATCGATTTCGTTT-GGTGTTGCGATTGCTGCTTATG 475
|| || || |||| | |||||| | ||||| || ||| ||||| |||||||||||||| |
Sbjct 438 TCGGAGACGATGACT-AACATGCTCTCGATCTC-TTTCGGTGTCGCGATTGCTGCTTACG 495
Query 476 GTGAAGCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGAAG 535
|||| |||| || ||| ||||| || || |||||||||||||| || |||||||| |
Sbjct 496 GTGAGGCTAAATTCGATACCTGGGGAGTCATGCTTCAGCTTGGTGCCGTAGCTTTTGAGG 555
Query 536 CTACTCGTTTGGTTTTGATTCAGATCTTGTT-AGGAGATAAAGGGATTAAGCTTAATCCC 594
| || | ||||||||||||||||||||| | | |||||| || || ||||||||
Sbjct 556 CAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTC-TAAAGGAATCAATCTTAATCCA 614
Query 595 ATTACTTCGTTATATTACGTTGCTCCTTGTTGTTTGGCCTTCTTGTTTATTCCAT-GGAT 653
|| ||||| || || ||||| |||||||||||||||| |||| | ||| |||| | ||||
Sbjct 615 ATCACTTCCTTGTACTACGTCGCTCCTTGTTGTTTGGTCTTCCTCTTT-TTCCCTTGGAT 673
Query 654 CTACGTTGAGTTTCCTG-TTCTTAGAG-A-TACGTCTAGCTTCCACTTGGATTACGCAAT 710
|| |||||| | || | |||||| || | | | || || |||||||| |||| || ||
Sbjct 674 CTTCGTTGAACTCCC-GATTCTTA-AGGAAT-CATCGAGTTTCCACTTCGATTTCGTGAT 730
Query 711 TTTCGG-AGCGAATTC-GTTTTGTGCGTTTGCGTTGAATCTTGCTGTGTTTCTTTTGGTT 768
|||||| | | ||||| || | |||| ||||| ||||| || |||||||| ||| | |||
Sbjct 731 TTTCGGGA-CTAATTCCGTAT-GTGCATTTGCTTTGAACCTCGCTGTGTTCCTTCTCGTT 788
Query 769 GGGAAGACATCTGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGATT 828
|| || || || ||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct 789 GGAAAAACCTCGGCTTTAACGATGAATGTTGCTGGTGTGGTTAAGGATTGGCTTTTGATT 848
Query 829 GCTTTCTCATGGTCTGTGATTAAGGATACTGTGACTCCTATTAATCTTTTCGGGTACGGG 888
|| ||||| |||||||||||||| ||||| || ||||| ||||||| ||||| ||||||
Sbjct 849 GCCTTCTCTTGGTCTGTGATTAAAGATACGGTTACTCCGCTTAATCTCTTCGGTTACGGG 908
Query 889 ATTGCGTTCTTGGGAGTTGCGTATTATAATCAC-GCCAAGTTACAGGCTTTGAAGGCTAA 947
||||||||||||| ||||| ||||| |||||| || ||||| |||||||||||||||||
Sbjct 909 CTTGCGTTCTTGGGTGTTGCCTATTACAATCACTGC-AAGTTGCAGGCTTTGAAGGCTAA 967
Query 948 AGAGGAGGAGAAGAAGAAGATTCAGCAAGCTGATGAGGAGAG-TGGTCGGTTGCTT--G- 1003
||| | |||||||| | |||||||| ||||||| || || || | || |||| |
Sbjct 968 AGATGCTCAGAAGAAG--G-TTCAGCAATCTGATGAAGA-AGCTGCTGGGAAGCTTTTGG 1023
Query 1004 AAGAGAGGGAAGGTGA 1019
||||||||||| ||||
Sbjct 1024 AAGAGAGGGAAAGTGA 1039
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39304727427
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5