BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G13210.1
Length=2183
Score E
Sequences producing significant alignments: (Bits) Value
Ahg488135 jgi|Araly1|488135|fgenesh2_kg.6__1269__AT5G13210.1 2669 0.0
Ahg479996 jgi|Araly1|479996|fgenesh2_kg.3__2697__AT3G24780.1 1308 0.0
Ahg319184 jgi|Araly1|319184|fgenesh1_pm.C_scaffold_3002200 1096 0.0
Ahg905626 jgi|Araly1|905626|Al_scaffold_0003_2754 1066 0.0
Ahg899811 jgi|Araly1|899811|Al_scaffold_0004_461 435 9e-121
> Ahg488135 jgi|Araly1|488135|fgenesh2_kg.6__1269__AT5G13210.1
Length=2115
Score = 2669 bits (1445), Expect = 0.0
Identities = 1879/2080 (90%), Gaps = 64/2080 (3%)
Strand=Plus/Plus
Query 30 TCATCTATCACTTCTAATTTCTAAACAACAAACCATGTCTCCTTCTCC-TCTGCTTGGTC 88
|||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||||
Sbjct 1 TCATCTATCACTTCTAATTTCTAAACAA-AAACCATGCCTCCTTCTCCGT-TGCTTGGTC 58
Query 89 CACCTGAGCTCAGAGATCCCAACTCTCTCCTCCCAAAACCCACCACAACTTCTGGTCCCA 148
|||| ||||||||||||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct 59 CACCAGAGCTCAGAGATCCCAACTCTCTCCTCCCAAAACCCATCACACCTTCCGGTCCCA 118
Query 149 GCGACCCTTTCATGGACGCTATGGTTTCAAATTTCAACAACTCAGCTAGAGTCAACAACG 208
|| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
Sbjct 119 GCAACCCTTTCATGGACGCTATGGTCTCAAATTTCAACAACTCAACTAGAGTCAACGTCA 178
Query 209 TCAAC-TCTCCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGC 267
|| | |||||||| ||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 179 TC-TCTTCTCCTCCCATGGGCTACACCGAGAACAATTCCGCCACGCACCTCTCCTCAGGC 237
Query 268 AACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAACACTCTCTCGAG 327
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 238 AACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAAGACTCTCTGGAG 297
Query 328 CAGTGGTTACAAGGTGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAAT 387
|||||| |||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 298 CAGTGGCTACAGGGAGCTTGGGACCACGACGCCTTGACCACTCTCAAGCTTATCTGTAAC 357
Query 388 CTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTA 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 CTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTA 417
Query 448 TGGCTCCATGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCTCAATTT 507
|||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||||
Sbjct 418 TGGCTCCATGGTTGTCATCCCAAAACTCTAGCTTGTAACCTCGAGTCCCTCTCTCAATTT 477
Query 508 GGATACTTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGG 567
||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| ||
Sbjct 478 GGATACTTTAAAGATTTCCCAGAGATTCTTTACCGGATTCTTCAAGGATCTGACATCAGG 537
Query 568 AAGATCCAGAAATCAGAAAGGTTCAAGAGGAAAAGTGAAGC-TCT--AGATAGAAGAGCT 624
||||||||||||||||||||||||| |||||||| |||||| ||| || ||||||||||
Sbjct 538 AAGATCCAGAAATCAGAAAGGTTCAGGAGGAAAACTGAAGCATCTCGAGGTAGAAGAGCT 597
Query 625 CC--T-TAT---GAT-GGTC--AT-TGT--TATCATGGTCGTCTTTATGGTGGTCGTGGA 672
|| | ||| || || | | | ||| |||||||| ||||||||||||||||
Sbjct 598 CCTTTCTATCCCAATCACTCGGGTGTCTCATATGGTGGTCGTCCTTATGGTGGTCGTGGA 657
Query 673 CGTGGATCTAGTCGCCCCAGTAGTAAAAGGAAGCCAGTGGCGACGAGGGCGTTGAGAGTA 732
|||||||| |||||| | || ||||||||||||||||||| || |||| | ||||||||
Sbjct 658 CGTGGATCCGGTCGCCGCGGTGGTAAAAGGAAGCCAGTGGCCACAAGGGAGCTGAGAGTA 717
Query 733 GCCAACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCAAGCTTGGATCGGAAGAAA 792
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct 718 GCCAACGCAGAGAGGAAGAACCAAGCGGAGAAAGCCAGAGCAAGCTTGGATCGCAAGAAA 777
Query 793 AAGAAGGTTTCGATGGGGAAGGACGCGTTTACAAGATATTCTTGCGATCCAGACTATAGA 852
||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 778 AAGAAGGTTTCAATGGGGAAGGACGCGTTTACAAGATATTCTCATGATCCAGACTATCGG 837
Query 853 TATCTCCACGAACGCGTCTCTGATCTATTCGCAAATCAG-CTAAAGAAAGATCTTGAGTT 911
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 838 TATCTCCACGAACGCGTCTCTGATCTATTCGCAAATC-GACTAAAGAGAGATCTTGAGTT 896
Query 912 TTTGACATCGGA-CAAACCAAACGAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTG 970
||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 897 TTTGACATCCGACCAAA-CAAACCAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTG 955
Query 971 ACTCTTCGTTTGACAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTACTC 1030
| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 956 ATTCTTCGTTTGACAAAACAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTCCTC 1015
Query 1031 GAGAATCATTCCCTGAATACGAAGGCGTTGTA-GAAGCTCACTATGCATACAGAGTTCGT 1089
|||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||
Sbjct 1016 GAGAATCATTCCCTGAATACGAAGGCGTTG-ACGAAGCTCACTATGCCTACAGAGTTCGT 1074
Query 1090 GATCGGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACTCTGCAACTGCCTGAAGTA 1149
||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1075 GATCGTCTAAGGAAAGAAGTTCTTGTTCCTCTGCGGAAAACTCTGCAACTCCCTGAAGTA 1134
Query 1150 TATATGGGAGCGAGAAACTGGGATATTCTTCCGTACAACCGTGTAGCATCAGTGGCGATG 1209
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1135 TACATGGGAGCGAGAAACTGGGATACTCTTCCGTACAACCGTGTAGCATCAGTGGCAATG 1194
Query 1210 AAGTCGTACAAGGAGATATTCTTGAAGCACGACGCAGAGAGGTTTCAGCAATATCTTGAC 1269
||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 1195 AAGACGTACAAGGATATATTCTTGAATCACGACGCAGAGAGGTTTCAACAATACCTTGAC 1254
Query 1270 GATGCAAAGGCGGGGAAAACCAAGGTAGCTGCTGGTGCTGTGTTGCCTCATGAGATAATC 1329
||||||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct 1255 GATGCAAAGACGGGTAAAACCAAGGTAGCTGCCGGTGCTGTGTTACCTCACGAGATAATC 1314
Query 1330 AGAGAGTTAGACGGTGGAGACGGTGGACAAGTAGCAGAGCTGCAATGGAAGA-GAACGGT 1388
||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct 1315 AGAGATTTAGACGGTGGAGACGGTGGACAAGTAGCTGAGCTGCAATGGAA-ACGAACGGT 1373
Query 1389 AGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTGTCTGTGACGTTTCAGG 1448
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1374 GGATGATCTGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTATCTGTGACGTTTCAGG 1433
Query 1449 GTCTATGAATGGTGAACCAATGGAGGTTTGTGTGGCTTTGGGTCTGCTAGTCTCTGAGCT 1508
||||||| ||||||| ||||||||||||| || |||||||||||||||||||| ||| |
Sbjct 1434 GTCTATGGATGGTGATCCAATGGAGGTTTCAGTCGCTTTGGGTCTGCTAGTCTCAGAGTT 1493
Query 1509 ATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTCAGCCAAAATCCGGAGTTGCATTT 1568
||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||
Sbjct 1494 ATCTGAAGAGCCATGGAGAGGAAAGCTTATAACTTTCAGCCAAAACCCGGAGATGCATTT 1553
Query 1569 GGTGAAAGGAGACGATC-TGTA-CTCAAAAACAGAGTTTGTTaaaaaaaTGCAATGGGGT 1626
||||| ||||||||| | || | |||||| |||||||||| | || |||||||||||
Sbjct 1554 GGTGACAGGAGACGA-CTTG-AGATCAAAATCAGAGTTTGTGAGGAATATGCAATGGGGA 1611
Query 1627 ATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTG-GAGTGGCCGTACAAGAGAA 1685
||||||||||||||||||||||||||||| ||||||| || |||| || ||| ||| |||
Sbjct 1612 ATGAACACTGATTTTCAGAAAGTGTTTGACTTGATTC-TGAGAGTTGCGGTAGAAGGGAA 1670
Query 1686 GCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTTGATCA 1745
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1671 GCTGAAACCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTTGATCA 1730
Query 1746 AGCGGCGTCGTCGTCACATTATTCAAGACCAGGCTATGCATTTTTAAGGCAGCCTCCAAG 1805
|||| | | ||||| || || | | | |||| | | ||||| || | |
Sbjct 1731 AGCGTC-T--TCGTC-CA--AT--A---C-A---TATGGA-----A-GGCAGTCT--AGG 1767
Query 1806 TAATCCAAGTAATGGATGGGAAACGGATTATGAAGTGATTGTGAGGAAGTATAAACAGAA 1865
| | || | ||||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct 1768 -AGT--AA-T---GGATGGGAAACTGATTATGAGGTGATTGTGAGGAAGTATAGGCAGAA 1820
Query 1866 TGGGTATGGAGACGTTGTGCCGGAGATAGTGTTTTGGAACTTGAGGGATTCGAGAGCAAC 1925
|||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1821 TGGGTATGGAGAAGTTGTGCCGGATATAGTGTTTTGGAACTTGAGGGATTCAAGAGCAAC 1880
Query 1926 GCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTGAGTGGCTTTTCGAAGAATTTGAT 1985
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1881 GCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTCGAAGAATTTGAT 1940
Query 1986 GAAAATGTTTTTGGAACATGATGGAGAGATTGATCCTGTGATGATGATGGAGACTGCTAT 2045
||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||
Sbjct 1941 GAAAATGTTTTTGGAGCATGATGGAGAGATTGATCCTATGATGATGATGGAGGCTGCAAT 2000
Query 2046 TTCTAAAGATGAGTATAAGTCGCTTGTTGTTGTTGATTAA 2085
|||||||||||||||||||||||||||| | |||||||||
Sbjct 2001 TTCTAAAGATGAGTATAAGTCGCTTGTTATAGTTGATTAA 2040
> Ahg479996 jgi|Araly1|479996|fgenesh2_kg.3__2697__AT3G24780.1
Length=2193
Score = 1308 bits (708), Expect = 0.0
Identities = 1148/1355 (85%), Gaps = 51/1355 (4%)
Strand=Plus/Plus
Query 715 ACGAGGGCGTTGAGAGTAGCCAACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCA 774
||||||| | |||| ||||| ||||| ||||||||||| |||| |||||||||||||||
Sbjct 841 ACGAGGGAGCTGAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGAGCA 900
Query 775 AGCTTGGATCGGAAGAAAAAGAAGGTTTCGA-TGGGGAAGGACGCGTTTACAAGATATTC 833
|||||| | || ||| ||||||||||||| | ||||||||| ||| | |||||| |||||
Sbjct 901 AGCTTGAAGCGCAAGCAAAAGAAGGTTTC-ATTGGGGAAGGCCGCATCTACAAGGTATTC 959
Query 834 TTGCGATCCAGACTATAGATAT-CTCCACGAACGCGTCTCTGATCTATTCGCAAATCAGC 892
| ||||||| | ||||| | | ||||||||||| ||||||||||||||||||||||| |
Sbjct 960 TAACGATCCAAAATATAGGT-TCCTCCACGAACGTGTCTCTGATCTATTCGCAAATCAAC 1018
Query 893 TAAAGAAAGATCTTGAGTTTTTGACAT-CGGACAAACCAAACGAAATCTCTCTTGCTGCT 951
||| || ||| |||||||||||||||| ||| | ||||||| |||||||||| || |||
Sbjct 1019 TAAGGAGAGACCTTGAGTTTTTGACATCCGG-CCAACCAAATAAAATCTCTCTAGCGGCT 1077
Query 952 AAATGGTGTCCATCGCTTGACTCTTCGTTTGACAAAGCAACTCTTCTCTGCGAGAGCATT 1011
|||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 1078 AAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTGCTCTGCGAGAGCATT 1137
Query 1012 GCTAGGAAGATCTTTACTCGAGAATCATTCCCTGAATACGAAGGCGTTGTAGAAGCTCAC 1071
||||||||||||||| | | |||||||||||| |||||||||||||| | ||| ||||||
Sbjct 1138 GCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCAC 1197
Query 1072 TATGCATACAGAGTTCGTGATCGGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACT 1131
||||| ||||||||||||||||||||||||||| | ||||||||||| || || || |||
Sbjct 1198 TATGCGTACAGAGTTCGTGATCGGCTAAGGAAACAAGTTCTTGTTCCCCTCCGGAAGACT 1257
Query 1132 CTGCAACTGCCTGAAGTATATATGGGAGCGAGAAAC-TGG-GATATTCTTCCGTACAACC 1189
|||||||| ||||||||||| |||||||| || | | ||| ||| ||| || |||||||
Sbjct 1258 CTGCAACTCCCTGAAGTATACATGGGAGCTAG-AGCTTGGCGAT-CTCTCCCTTACAACC 1315
Query 1190 GTGTAGCATCAGTGGCGATGAAGTCGTACAAGGAGATATTCTTGAAGCACGACGCAGAGA 1249
|||| |||||||||||||||||||||||||| || || |||||| | | ||||||||||
Sbjct 1316 GTGTTGCATCAGTGGCGATGAAGTCGTACAAAGAAATTTTCTTGTACCGTGACGCAGAGA 1375
Query 1250 GGTTTCAGCAATATCTTGACGATGCAAAGG-CGGGGAAAACCAAGGTAGCTGCTGGTGCT 1308
||||||||||||||||| | ||||| ||| ||||||||| ||| |||| || ||||||
Sbjct 1376 GGTTTCAGCAATATCTTAAAGATGC-GAGGATGGGGAAAACGAAGATAGCCGCGGGTGCT 1434
Query 1309 GTGTTGCCTCATGAGATAATCAGAGAGTTAGACGGTGGAGACGGTGGACAAGTAGCAGAG 1368
||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || |||
Sbjct 1435 GTGTTACCTCACGAGATAATCAGAGAATTAGACGGCGGAGACGGTGGACAAGTCGCTGAG 1494
Query 1369 CTGCAATGGAAGA-GAACGGTAGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTAT 1427
||||||||||| | ||| ||| |||||| | ||| ||||||||||||||| || || ||
Sbjct 1495 CTGCAATGGAA-ACGAATGGTTGATGATCTTAAAAAGAAAGGTTCTTTGACCAACTGCAT 1553
Query 1428 AGCTGTCTGTGACGTTTCAGGGTCTAT-GAATGGTGAACCAATGGAGGTTTGTGTGGC-T 1485
||| ||||||||||||| |||||||| ||| ||||| ||||||||||||| || ||
Sbjct 1554 GGCTATCTGTGACGTTTCGGGGTCTATGGAA-GGTGAGCCAATGGAGGTTTCAGTCGCAC 1612
Query 1486 TTGGGTCTGCTAGTCTCTGAGCTATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTC 1545
|| ||| |||||||||||||| |||| ||||||||||||||||||||||| ||||| |||
Sbjct 1613 TT-GGTTTGCTAGTCTCTGAGTTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTC 1671
Query 1546 AGCCAAAATCCGGAGTTGCATTTGGTGAAAGGAGACGATCTGTA-CTCAAAAACAGAGTT 1604
||| |||| || || |||||||||||||||||||||||| || | ||||||||| ||||
Sbjct 1672 AGCAAAAACCCTGAATTGCATTTGGTGAAAGGAGACGATTTG-AGATCAAAAACA-AGTT 1729
Query 1605 T-GTTaaaaaaaTGCAATGGGGTATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTC 1663
| || | || ||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1730 TCGTGGAGAATATGGAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTC 1789
Query 1664 TTGGAGTGGCCGTACAAGAGAAGCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGT 1723
|| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 1790 TTAAAGTGGCCGTAGAAGGGAAGCTGAAGCCAGAAGAGATGATCAAGAGGGTGTTTGTGT 1849
Query 1724 TCAGTGATATGGAGTTTGATCAAGCGGCGTCGTCGTCACATTATTCAAGACCAGGCTATG 1783
||||||| |||||||||||||||||| ||| | || | | || || || |||
Sbjct 1850 TCAGTGACATGGAGTTTGATCAAGCG---TCGAC-TC-CGT-AT--AAT----GG--ATG 1895
Query 1784 CATTTTTAAGGCAGCCTCCAAGTAATCCAAGTAATGGATGGGAAACGGATTATGAAGTGA 1843
||| | |||||| |||||| | | |||||| || |||||||| ||||
Sbjct 1896 GGG----AAGACCGCCTCCGAGTAAT----G----G-ATGGGATACAGATTATGAGGTGA 1942
Query 1844 TTGTGAGGAAGTATAAACAGAATGGGTATGGAGACGTTGTGCCGGAGATAGTGTTTTGGA 1903
||||||| ||||| ||| |||| ||||| ||||| | ||||||| |||||||||||||||
Sbjct 1943 TTGTGAGCAAGTACAAAGAGAAAGGGTACGGAGAAGCTGTGCCGCAGATAGTGTTTTGGA 2002
Query 1904 ACTTGAGGGATTCGAGAG-CAACGCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTG 1962
|| ||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||
Sbjct 2003 ACCTGAGGGATTCGAG-GTCAACGCCTGTGCTTGGAAACAAGAAAGGAGTGGCTTTGGTA 2061
Query 1963 AGTGGCTTTTCGAAGAATTTGATGAAAATGTTTTTGGAACATGATGGAGAGATTGATCCT 2022
||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct 2062 AGTGGGTTTTCGAAGAATTTGATGAAAATGTTCTTGGATCACGATGGAGAGATTGATCCC 2121
Query 2023 GTGATGATGATGGAGACTGCTATTTCTAAAGATGA 2057
| | ||| ||| || ||||||| |||| ||||||
Sbjct 2122 ATTACGATCATGAAGGCTGCTATATCTAGAGATGA 2156
Score = 435 bits (235), Expect = 9e-121
Identities = 336/384 (88%), Gaps = 10/384 (3%)
Strand=Plus/Plus
Query 217 CCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGCAACCCCTGC 276
||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 331 CCTGCGATGGGCTACACCGAGAATAGATCCGCCACGTACCTCTCCTCAGGCAACCCCTGT 390
Query 277 CTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAA-ACACTCTCTCGAGCAGTGGTT 335
|||||||||||||| ||||||||||| |||||| || | | ||||| |||||| || |
Sbjct 391 CTCGACTTCTTCTTTCACGTTGTTCCTTCCACGCCCAAGA-AATCTCTGGAGCAGCGGCT 449
Query 336 ACAAGG-TGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAATCTTCGTG 394
| |||| ||||||||||| || | || ||||| ||||||||||||||||| ||||| |
Sbjct 450 A-AAGGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAACCTTCGAG 508
Query 395 GAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTATGGCTCC 454
||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 509 GAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTTGTGGCTCC 568
Query 455 ATGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCT-CAA-TTTGGATA 512
|| |||| ||||| |||||||||||||||||||||||||| | ||| ||| ||||| ||
Sbjct 569 ATAGTCGCCATCCGAAAACCCTAGCTTGTAACCTCGAGTC-C-ATCTCCAAGTTTGGCTA 626
Query 513 CTTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGGAAG-A 571
||||||||||||| |||| |||||||||||||||||||||||||||||||||| | | |
Sbjct 627 TTTTAAAGATTTTCAAGAGATTCTTTACCGGATTCTACAAGGATCTGAAATCCGCA-GTA 685
Query 572 TCCAGAAATCAGAAAGGTTCAAGA 595
|||||||||| ||| ||| |||||
Sbjct 686 TCCAGAAATCGGAATGGTACAAGA 709
> Ahg319184 jgi|Araly1|319184|fgenesh1_pm.C_scaffold_3002200
Length=1932
Score = 1096 bits (593), Expect = 0.0
Identities = 888/1028 (86%), Gaps = 29/1028 (3%)
Strand=Plus/Plus
Query 737 ACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCAAGCTTGGATCGGAAGAAAAAGA 796
|||| ||||||||||| |||| ||||||||||||||||||||||| || ||| ||||||
Sbjct 599 ACGCAGAGAGGAAGAACCAAGAAGAGAAAGCCAGAGCAAGCTTGGAGCGCAAGCAAAAGA 658
Query 797 AGGTTTCGATGGGGAA-GGACGCGTTTACAAGATATTCTTGCGATCCAGACTATAGATAT 855
||||||| || ||||| |||||| ||||||| ||||||| ||||||||||||||| | |
Sbjct 659 AGGTTTCAAT-GGGAATGGACGCATTTACAAAATATTCTAACGATCCAGACTATAGGTTT 717
Query 856 CTCCACGAACGCGTCTCTGATCTATTCGCAAATCAGCTAAAGAAAGATCTTGAGTTTTTG 915
|||||||||||||||||||| ||||| || ||||| |||| || ||| ||||||||||||
Sbjct 718 CTCCACGAACGCGTCTCTGACCTATTTGCCAATCAACTAAGGAGAGACCTTGAGTTTTTG 777
Query 916 ACAT-CGGACAAACCAAACGAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTGACTC 974
|||| ||| | |||||||| ||||||| || || |||||||||||||| || ||||| ||
Sbjct 778 ACATCCGG-CGAACCAAACAAAATCTCCCTAGCGGCTAAATGGTGTCCCTCACTTGATTC 836
Query 975 TTCG-TTTGACAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTACTCGAG 1033
|| | ||||| |||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct 837 TT-GCTTTGATAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTTCCCGTG 895
Query 1034 AATCATTCCCTGAATACGAAGGCGTTGTAGAAGCTCACTATGCATACAGAGTTCGTGATC 1093
|||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct 896 AATCATTCCCCGAATACGAAGGCGTTGAAGATGCTCACTATGCGTACAGAGTTCGTGATC 955
Query 1094 GGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACTCTGCAACTGCCTGAAGTATATA 1153
| ||||||||| | |||||||||||||| || || ||||||||||| |||||||||||||
Sbjct 956 GACTAAGGAAACAGGTTCTTGTTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATATA 1015
Query 1154 TGGGAGCGAGAAACTGGGATAT-TCTTCCGTACAACCGTGTAGCATCAGTGGCGATGAAG 1212
||||||||||| | ||||| || ||| || ||||||||||| ||||||||||||||||||
Sbjct 1016 TGGGAGCGAGAGATTGGGA-ATCTCTCCCTTACAACCGTGTTGCATCAGTGGCGATGAAG 1074
Query 1213 TCGTACAAGGAGATATT-CTTGAAGCACGACGCAGAGAGGTTTCAGCAATATCTTGACGA 1271
|||||||||| | | || |||||| || ||||| ||||||||||||||||||||| ||||
Sbjct 1075 TCGTACAAGG-GTTTTTTCTTGAAACATGACGCTGAGAGGTTTCAGCAATATCTTAACGA 1133
Query 1272 TGCAAAGGC-GGGGAAAACCAAGGTAGCTGCTGGTGCTGTGTTGCCTCATGAGATAAT-C 1329
||||| || ||||||||| | | ||||||| |||||| |||| ||||| |||||||| |
Sbjct 1134 TGCAA-GGATGGGGAAAACGACGATAGCTGCGGGTGCTCTGTTACCTCACGAGATAATAC 1192
Query 1330 AGAGAGTTAGAC-GGTG-G-AGACGGTGGACAAGTAGCAGAGCTGCAATGGAAGA-GAAC 1385
|||| |||||| || | | ||||||||||||||| || |||||||||||||| | |||
Sbjct 1193 -GAGAATTAGACTGGGGAGGAGACGGTGGACAAGTCGCTGAGCTGCAATGGAA-ACGAAT 1250
Query 1386 GGTAGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTGTCTGTGACGTTTC 1445
||| ||||| | ||||||||||||||||| | ||| || || ||| ||| |||||||||
Sbjct 1251 GGTTGATGACCTTAAAGAGAAAGGTTCTTTAACGAACTGCATGGCTATCTCTGACGTTTC 1310
Query 1446 AGGG-TCTATGAATGG-TGAACCAATGGAGGTTTGTGTGGCT-TTGGGTCTGCTAGTCTC 1502
||| ||||||| ||| ||| ||||||||||||| || || |||| | ||||||||||
Sbjct 1311 -GGGATCTATGA-TGGGTGAGCCAATGGAGGTTTCAGTCGCCCTTGGTT-TGCTAGTCTC 1367
Query 1503 TGAGCTATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTCAGCCAAAATCCGGAGTT 1562
||||||||| ||||||||||||| ||||||||| ||||| |||||| |||| || || |
Sbjct 1368 TGAGCTATCAGAAGAGCCATGGAGAGGAAAGCTTATAACATTCAGCGAAAACCCTGAACT 1427
Query 1563 GCATTTGGTGAAAGGAGACGATCTGTAC-TCAAAAACAGAGTTTGTTaaaaaaaTGCAAT 1621
||||||||||| |||||||||| || | ||||||||||||||||| | || ||| |||
Sbjct 1428 GCATTTGGTGACAGGAGACGATTTG-AGGTCAAAAACAGAGTTTGTGAGGAATATGGAAT 1486
Query 1622 GGGGTATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTG-GAGTGGCCGTACAA 1680
||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||
Sbjct 1487 GGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCT-GAGAGTCGCCGTAGAA 1545
Query 1681 GAGAAGCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTT 1740
| |||||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1546 GGGAAGCTTAGGCCGCAAGATATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTT 1605
Query 1741 GATCAAGC 1748
||||||||
Sbjct 1606 GATCAAGC 1613
Score = 497 bits (269), Expect = 1e-139
Identities = 410/476 (86%), Gaps = 17/476 (4%)
Strand=Plus/Plus
Query 160 ATGGACGCTATGGTTTCAAATTTCAACAACTCAGCTAGAGTCAACAACGTCAACTC-T-- 216
|||||||| ||||| ||||| |||||||| ||| ||| | | |||||||||||| |
Sbjct 1 ATGGACGCGATGGTCTCAAACTTCAACAAATCAACTA-A-AC-TCAACGTCAACTCTTCA 57
Query 217 CCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGCAACCCCTGC 276
|| || |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct 58 CCCCCCATGGGCTACACCGAGAATGGATCCGCCACGTACCTCTCCGCAGGCAACCCCTGC 117
Query 277 CTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAACACTCTCTCGAGCAGTGGTTA 336
|||||||||||||||||||||||||| |||||| || | ||||| ||| || || ||
Sbjct 118 CTCGACTTCTTCTTCCACGTTGTTCCCTCCACGCCCAAGGAATCTCTTGAGAAGCGGCTA 177
Query 337 CAAG-GTGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAATCTTCGTGG 395
|||| | ||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct 178 CAAGAG-GCTTGGGGCCACGACGCCTTAACCACCCTCAAGCTTATCTGTAACCTTCGTGG 236
Query 396 AGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTATGGCTCCA 455
||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct 237 AGTCCGTGGCACCGGAAAATCTGACAAGGAAGGGTTTTACACCGCGGCGTTGTGGCTCCA 296
Query 456 TGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCTCAA--TTTGGATAC 513
||||| |||||||||||||||||||||||||||||||| | | ||||| ||||| |||
Sbjct 297 TGGTCACCATCCCAAAACCCTAGCTTGTAACCTCGAGTC-CAT-CTCAACATTTGGTTAC 354
Query 514 TTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGGAAG-AT 572
|||||||||||||||||| |||||||||||||||||||||||||||||||||| | | ||
Sbjct 355 TTTAAAGATTTTCCAGAGGTTCTTTACCGGATTCTACAAGGATCTGAAATCCGCA-GTAT 413
Query 573 CCAGAAATCAGAAAGGTTCAAGAGGAAAAGTGAAGC-TCTAGA--TAGAAGAGCTC 625
|||||||| ||| || | ||||||| | | ||| ||| || |||||||||||
Sbjct 414 CCAGAAATTGGAATGGAGCCAGAGGAAGGGCGGAGCATCTCGAAATAGAAGAGCTC 469
Score = 106 bits (57), Expect = 8e-22
Identities = 71/78 (91%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 2006 ATGGAGAGATTGATCCTGTGATGATGATGGAGACTGCTATTTCTAAAGATGAGTATAAGT 2065
|||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||
Sbjct 1853 ATGGAGAGATTGATCCCATGATGATCATGGAGGCTGCTATATCTAAAGATGAGTATAAGT 1912
Query 2066 CGCTTGTTGTTGTTGATT 2083
|||||||||| ||||||
Sbjct 1913 CGCTTGTTGTAATTGATT 1930
> Ahg905626 jgi|Araly1|905626|Al_scaffold_0003_2754
Length=2157
Score = 1066 bits (577), Expect = 0.0
Identities = 898/1052 (85%), Gaps = 26/1052 (2%)
Strand=Plus/Plus
Query 715 ACGAGGGCGT-TGAGAGTAGCCAACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGC 773
|||||| | | |||| ||||| ||||| |||| ||| | |||| |||||||||| |||
Sbjct 832 ACGAGGTC-TCTGAGGGTAGCGAACGCAAAGAGAAAGGACCAAGAGGAGAAAGCCAAAGC 890
Query 774 AAGCTTGGATCGGAAGAAAAAGAAGGTTTCGATGGGGAAGGACGCGTTTACAAGATATTC 833
||||||||| || ||| ||||||||||||| ||||| |||| ||| |||||||||||| |
Sbjct 891 AAGCTTGGAGCGCAAGCAAAAGAAGGTTTCAATGGGTAAGGCCGCATTTACAAGATATAC 950
Query 834 TTGCGATCCAGACTATAGATATCTCCACGAACGCGTCTCTGATCTATTCGCAAATCAGCT 893
| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||
Sbjct 951 TAACGATCCAGACTATAGGTTTCTCCACGAACGTGTCTCTGATCTATTCGCAAATCAGCT 1010
Query 894 AAAGAAAGATCTTGAGTTTTTGACATC-GGACAAACC-AAACGAAATCTCTCTT-GCTGC 950
|| || ||| ||||||||||| | ||| | | |||| |||| |||||||| || || ||
Sbjct 1011 AAGGAGAGACCTTGAGTTTTTAAAATCACG-CCAACCAAAAC-AAATCTCT-TTAGCGGC 1067
Query 951 TAAATGGTGTCCATCGCTTGACTCTTCGTTTGACAAAGCAACTCTTCTCTGCGAGAGCAT 1010
|||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||
Sbjct 1068 TAAATGGTGTCCCTCGCTTGATTCTTCGTTCGACAAAGCAACTCTTCTTTGCGAGAGTAT 1127
Query 1011 TGCTAGGAAGATCTTTACTC-GAGAATCATTCCCTGAATACGAAGGCGTTGTAGAAGCTC 1069
|||||||||||||||| | | |||||||||||| |||||||||||||| | ||||||||
Sbjct 1128 TGCTAGGAAGATCTTT-CCCAAAGAATCATTCCCGGAATACGAAGGCGTGGAAGAAGCTC 1186
Query 1070 ACTATGCATACAGAGTTCGTGATCGGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAA 1129
||||||| ||||||||||||||||||||||||||| | ||||||||||| || || | ||
Sbjct 1187 ACTATGCGTACAGAGTTCGTGATCGGCTAAGGAAACAAGTTCTTGTTCCCCTTCGGAGAA 1246
Query 1130 CTCTGCAACTGCCTGAAGTATATATGGGAGCGAGAAAC-TGG-GATATTCTTCCGTACAA 1187
| |||||||| ||||||||||| |||||||| || | | ||| ||| |||| || |||||
Sbjct 1247 CCCTGCAACTCCCTGAAGTATACATGGGAGCTAG-AGCTTGGCGAT-TTCTCCCTTACAA 1304
Query 1188 CCGTGTAGCATCAGTGGCGATGAAGTCGTACAAGGAGATATTCTTGAAGCACGACGCAGA 1247
||||| |||||||||| ||| ||| || |||||||| |||||| | | ||||||||
Sbjct 1305 TCGTGTTCCATCAGTGGCAATGGCGTCCTATAAGGAGATTTTCTTGTACCGTGACGCAGA 1364
Query 1248 GAGGTTTCAGCAATATCTTGACGATGCAAAGGCGGGGAAAACCAAGGTAGCTGCTGGTGC 1307
||||||||| ||||||||| ||||||| ||| |||||||||| ||| |||| || |||||
Sbjct 1365 GAGGTTTCAACAATATCTTAACGATGCGAAGACGGGGAAAACGAAGATAGCCGCCGGTGC 1424
Query 1308 TGTGTTGCCTCATGAGATAATCAGAGAGTTAGACGGTGGAGACGGTGGACAAGTAGCAGA 1367
||| | ||||| |||||||| | | | |||||||||||||||||||||||||| || ||
Sbjct 1425 AGTGCTACCTCACGAGATAATAAAAAATTTAGACGGTGGAGACGGTGGACAAGTTGCTGA 1484
Query 1368 GCTGCAATGGAAGA-GAACGGTAGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTA 1426
||| |||||||| | ||| ||| ||||| | ||||||||||||||||||| || || |
Sbjct 1485 GCTACAATGGAA-ACGAATGGTTGATGACCTTAAAGAGAAAGGTTCTTTGACCAACTGCA 1543
Query 1427 TAGCTGTCTGTGACGTTTCAGGGTCTATGAATGGTGAACCAATGGAGGTTTGTGT-G-GC 1484
| ||| ||||||||||||| |||||||||| |||||| ||||||||||||| || | ||
Sbjct 1544 TGGCTATCTGTGACGTTTCGGGGTCTATGAGTGGTGAGCCAATGGAGGTTTCAGTCGCGC 1603
Query 1485 TTTGGGTCTGCTAGTCTCTGAGCTATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTT 1544
|| ||| || |||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 1604 -TT-GGTTTGTTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATT 1661
Query 1545 CAGCCAAA-ATCCGGAGTTGCATTTGGTGAAAGGAGACGATCTGTA-CTCAAAAACAGAG 1602
||| |||| | || || ||||||||||||||||||||||| || | ||||||||| ||
Sbjct 1662 CAG-CAAAGACCCTGAACTGCATTTGGTGAAAGGAGACGATTTG-AGATCAAAAACA-AG 1718
Query 1603 TTT-GTTaaaaaaaTGCAATGGGGTATGAACACTGATTTTCAGAAAGTGTTTGATTTGAT 1661
||| || || | ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1719 TTTCGTGAAGAGAATGCAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGAT 1778
Query 1662 TCTTGGAGTGGCCGTACAAGAGAAGCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGT 1721
|||| |||||||||| ||| |||||||||||||||||||||||||||| | |||||||
Sbjct 1779 TCTTAAAGTGGCCGTAGAAGCCAAGCTGAAGCCGGAAGAGATGATCAAGACGTTGTTTGT 1838
Query 1722 GTTCAGTGATATGGAGTTTGATCAAGCGGCGT 1753
|||||||||||||||||||||| ||||| |||
Sbjct 1839 GTTCAGTGATATGGAGTTTGATGAAGCGTCGT 1870
Score = 420 bits (227), Expect = 2e-116
Identities = 334/384 (87%), Gaps = 14/384 (4%)
Strand=Plus/Plus
Query 219 TCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGCAACCCCTGCCT 278
|||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 330 TCCGATGGGCTACAGCGAGAATGGATCCGCCACGTACCTCTCCTCAGGCAACCCCTGCCT 389
Query 279 CGACTTCTTCTTCCACGTTGTTCCAAGCA-CGCCTAAAC--ACTCTCTCGAGCAGTGGTT 335
|||||||||||| ||| ||||||| || |||| ||| | ||||| |||||| || |
Sbjct 390 CGACTTCTTCTTTCACATTGTTCCTT-CAACGCC-AAAGTTA-TCTCTAGAGCAGCGGCT 446
Query 336 ACAAGGTG-CTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAATCTTCGTG 394
||| || | |||||||||| || ||||| ||||| ||||||||||||||||| |||||||
Sbjct 447 ACA-GGAGGCTTGGGACCATGATGCCTTAACCACTCTCAAGCTTATCTGTAACCTTCGTG 505
Query 395 GAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTATGGCTCC 454
||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 506 GAGTCCGAGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTTGTGGCTCC 565
Query 455 ATGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCTC-AA-TTTGGATA 512
|||||| ||||| |||||||||||| ||||||||||||| | | ||| || ||||| ||
Sbjct 566 ATGGTCACCATCCGAAAACCCTAGCTAGTAACCTCGAGTC-CAT-CTCCAAGTTTGGCTA 623
Query 513 CTTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGGAAG-A 571
|||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | |
Sbjct 624 TTTTAAAGATTTTCCGGAGATTCTTTACCGGATTCTACAAGGATCTGAAATCCGCA-GTA 682
Query 572 TCCAGAAATCAGAAAGGTTCAAGA 595
|||||||||| ||| ||| |||||
Sbjct 683 TCCAGAAATCGGAATGGTACAAGA 706
> Ahg899811 jgi|Araly1|899811|Al_scaffold_0004_461
Length=813
Score = 435 bits (235), Expect = 9e-121
Identities = 347/401 (87%), Gaps = 8/401 (2%)
Strand=Plus/Plus
Query 1295 TAGCTGCTGGTGCTGTGTTGCCTCATGAGATAATCAGAGAGTTAGACGGTGGAGACGGTG 1354
||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||| ||||
Sbjct 371 TAGCTGCTGGTGCTGTGTTACCTCACGAGATAATCAGAGTTTTAGATGGTGGAGAAGGTG 430
Query 1355 GACAAGTAGCAGAGCTGCAATGG-AAGAGAACGGTAGATGATATGAAAGAGAAAGGTTCT 1413
|||||||||| |||||||| ||| || | || ||| |||||| |||||||||||||||||
Sbjct 431 GACAAGTAGCTGAGCTGCAGTGGAAACA-AATGGTGGATGATCTGAAAGAGAAAGGTTCT 489
Query 1414 TTGAGGAATTGTATAGCTGTCTGTGACGTTTCAGGGTCTATGAATGGTGAACCAATGGAG 1473
|||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 490 TTGAGGAATTATATCGCTATCTGTGACGTTTCAGGGTCTATGAATGGTGATTCAATGGAG 549
Query 1474 GTTTGTGTGGCTTTGGGTCTGCTAGTCTCTGAGCTATCTGAAGAGCCATGGAAAGGAAAG 1533
|||| || |||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct 550 GTTTCAGTCGCTTTGGGTCTGCTAGTCTCAGAGTTATCTGAAGAGCCATGGAGAGGAAAG 609
Query 1534 CTAATAACTTTCAGCCAAAATCCGGAGTTGCATTTGGTGAAAGGAGACGATCT-GT-ACT 1591
|| ||||||||||| ||||| |||||| ||| ||||||| |||||| || || | | |
Sbjct 610 CTTATAACTTTCAGTCAAAACCCGGAGATGCGCTTGGTGACAGGAGATGA-CTTGAGA-T 667
Query 1592 CAAAAACAGAGTTTGTTaaaaaaaTGCAATGGGGTATGAACACTGATTTTCAGAAAGTGT 1651
| ||| |||||||||| | || ||||||||||| |||||||||| ||||||||||||||
Sbjct 668 CGAAATCAGAGTTTGTGAGGAATATGCAATGGGGAATGAACACTGTTTTTCAGAAAGTGT 727
Query 1652 TTGATTTGATTCTTG-GAGTGGCCGTACAAGAGAAGCTGAA 1691
|||| |||||||| | |||| | ||| ||| |||||||||
Sbjct 728 TTGACTTGATTCT-GAGAGTTGTTGTAAAAGGGAAGCTGAA 767
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82160658465
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5