BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G14860.1 Length=1479 Score E Sequences producing significant alignments: (Bits) Value Ahg350625 jgi|Araly1|350625|fgenesh1_pg.C_scaffold_6001218 2228 0.0 Ahg906507 jgi|Araly1|906507|Al_scaffold_0003_3635 1077 0.0 Ahg480568 jgi|Araly1|480568|fgenesh2_kg.3__3269__AT2G16890.2 1013 0.0 > Ahg350625 jgi|Araly1|350625|fgenesh1_pg.C_scaffold_6001218 Length=1473 Score = 2228 bits (1206), Expect = 0.0 Identities = 1392/1482 (94%), Gaps = 12/1482 (1%) Strand=Plus/Plus Query 1 ATGGCCGTTTCATCGTCGCATCATGCGGTTCTCTTCCCTTACATGTCAAAAGGCCACACG 60 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCCGTTTCATCATCGCATCATGTGGTTCTCTTCCCTTACATGTCAAAAGGCCACACG 60 Query 61 ATTCCTCTCCTCCAATTCGCCCGTCTCCTCCTCCGTCACCGCCGTATCGTCTCCGTAGAC 120 |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| | | Sbjct 61 ATTCCTCTCCTCCAATTCGCCCGTCTCCTCCTCCGTCACCACCGTGTCGTCCCCG--G-C 117 Query 121 GACGAAGAACCAACCATTTCCGTCACCGTCTTCACCACCCCAAAAAACCAACCATTCGTC 180 ||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 118 GAC---GAACCAACCACTTCCGTCACCGTCTTCACCACCCCAAAGAACCAACCATTCGTC 174 Query 181 TCAAACTTCCTCTCTGACGTCGCATCATCTATCAAAGTAATCTCCCTCCCTTTCCCTGAA 240 |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 175 TCAAACTTCCTCTCCGACGTCACATCATCAATCAAAGTAATCTCCCTCCCTTTCCCTGAA 234 Query 241 AACATCGCCGGAATCCCTCCCGGCGTCGAGAGCACCGACATGCTCCCTTCCATATCACTT 300 ||||||||||||||||||||||||||||||| |||||| | |||||||| ||| |||||| Sbjct 235 AACATCGCCGGAATCCCTCCCGGCGTCGAGAACACCGAAAAGCTCCCTTACATGTCACTT 294 Query 301 TACGTGCCCTTCACGCGCGCAACCAAATCTCTCCAGCCTTTCTTCGAAGCAGAACTCAAG 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 295 TACGTGCCCTTCACGCGCGCTACCAAATCTCTCCAGCCTTTCTTCGAAGCAGAACTCAAG 354 Query 361 AATCTTGAGAAAGTTTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGAATCC 420 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 AATCTTGAGAAAGTGTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGAATCT 414 Query 421 GCCGCTAAATTTGAGATCCCGAGACTTGCCTTCTACGGCATGAACTCCTACGCATCGGCT 480 ||||||||| | ||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct 415 GCCGCTAAACTCGAGATTCCGAGACTCGCCTTCTACGGCATGAACTCGTACGCATCGGCT 474 Query 481 ATGTGCTCCGCCATTTCGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAATCTGAT 540 |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 475 ATGTACTCTGCCGTTTCGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAATCTGAT 534 Query 541 ACTGAACCGGTTACTGTACCGGATTTTCCATGGATATGTGTTAAGAAGTGTGAGTTCGAT 600 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct 535 ACTGAACCGGTTACTGTACCGGATTTTCCATGGATAAGTGTTAAGAAGTGCGAGTTCGAC 594 Query 601 CCGGTTTTGACCGAACCGGATCAATCGGA-TCCAGCGTTCGAGCTA-CTCATTGACCATC 658 |||||| ||||||||||||||||||| || ||||||||| |||||| | ||| |||||| Sbjct 595 CCGGTTGTGACCGAACCGGATCAATC-GAGTCCAGCGTTTGAGCTAGC-CATGGACCATA 652 Query 659 TTATGTCCACCAAGAAAAGCCGTGGAGTTATAGTGAACAGCTTTTACGAGCTCGAGTCAA 718 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| Sbjct 653 TTATGTCCACCAAGAAAAGTCGTGGAGTTATAGTGAACAGTTTTTACGAGCTCGAGCCAA 712 Query 719 CG-TTCGTTGACTACCGGCTCCGTGATAACGATGAACCAAAACCGTGGTGTGTTGGGCCT 777 || ||| ||||||| ||||||| |||||| ||||| ||||| |||||||||||||||||| Sbjct 713 CGTTTC-TTGACTATCGGCTCCTTGATAATGATGAGCCAAAGCCGTGGTGTGTTGGGCCT 771 Query 778 TTGTGTTTGGTAAATCCTCCAAAACCGGAGAGTGATAAACCGGATTGGATTCATTGGTTG 837 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 772 TTGTGTTTGGTAAATCCTCCTAAACCGGAGAGTGATAAACCGGATTGGATTCATTGGTTG 831 Query 838 GACCGGAAACTAGAGGAAAGATGTCCGGTTATGTATGTGGCGTTTGGAACGCAGGCTGAG 897 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 832 GACCGGAAACTAGAGGAAAGATGTCCGGTTATGTACGTGGCGTTTGGTACGCAGGCTGAG 891 Query 898 ATATCGAACGAGCAGCTCAAGGAAATAGCATTAGGGTTGGAAGATTCCAAGGTCAATTTC 957 ||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct 892 ATATCAAACGATCAGCTCAAAGAAATTGCATTAGGGTTGGAAGATTCCAAGGTAAATTTC 951 Query 958 TTGTGGGTCACGAGAAAGGACTTGGAAGAAGTAACTGGAGGATTAGGGTTCGAAAAGAGA 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 952 TTGTGGGTCACGAGAAAGGACTTGGAAGAAGTAACTGGAGGATTAGGGTTCGAAAAGAGA 1011 Query 1018 GTGAAAGAGCATGGGATGATTGTGAGAGATTGGGTAGACCAATGGGAGATATTGTCACAT 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 GTGAAAGAGCATGGGATGATTGTGAGAGATTGGGTAGACCAATGGGAGATATTGTCACAT 1071 Query 1078 AAAAGTGTCAAAGGGTTTTTGAGTCATTGTGGATGGAACTCGGCGCAAGAGAGTATTTGC 1137 ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1072 GAAAGTGTCAAAGGATTTTTGAGTCATTGTGGATGGAACTCGGCGCAAGAGAGCATTTGC 1131 Query 1138 GCTGGGGTTCCACTACTCGCTTGGCCAATGATGGCAGAGCAGCCACTCAATGCGAAGTTG 1197 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1132 GCTGGAATTCCGCTACTCGCTTGGCCAATGATGGCAGAGCAGCCACTCAATGCGAAGTTG 1191 Query 1198 GTAGTGGAGGAGCTAAAGATCGGAGTAAGAATCGAAACAGAAGATGTAAGTGTGAAAGGA 1257 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 1192 GTAGTGGAGGAGCTAAAGATTGGAGTAAGAATCGAAACAGAAGATGGAAGTGTGAAAGGA 1251 Query 1258 TTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTGATGGAGGGAGAGATGGGG 1317 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1252 TTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTGATGGAAGGAGATATGGGG 1311 Query 1318 AAGACAACGATGAAGAATGTAAAAGAGTATGCGAAAATGGCGAAAAAAGCTATGGCTCAA 1377 ||||| | ||||||||||| |||||||||||| |||| |||||||||||| |||||||| Sbjct 1312 AAGACTATAATGAAGAATGTGAAAGAGTATGCGGAAATAGCGAAAAAAGCTTTGGCTCAA 1371 Query 1378 GGGACTGGTTCGTCTTGGAAGAGTTTGGATTCGCTTCTGGAAGAGCTTTGTAAGAGTAGA 1437 ||||| ||||| |||||||||| ||||||||| ||||| |||| | |||||||||||| | Sbjct 1372 GGGACCGGTTCTTCTTGGAAGAATTTGGATTCACTTCTTGAAGCGTTTTGTAAGAGTATA 1431 Query 1438 GAGCCAGACGGTGTTAATAAGTTGTCAAGTTCTGATGCTTAG 1479 |||||| || |||||||||||||||||||||||||| |||| Sbjct 1432 GAGCCAAACAATGTTAATAAGTTGTCAAGTTCTGATGATTAG 1473 > Ahg906507 jgi|Araly1|906507|Al_scaffold_0003_3635 Length=1449 Score = 1077 bits (583), Expect = 0.0 Identities = 1193/1476 (81%), Gaps = 87/1476 (6%) Strand=Plus/Plus Query 19 CATCATGCGGTTCTCTTCCCTTACATGTCAAAAGGCCACA-CGATTCCTCTCCTCCAATT 77 ||||| | ||| |||||||||||||||||||||||||||| | || |||||||||||||| Sbjct 19 CATCACGTGGTCCTCTTCCCTTACATGTCAAAAGGCCACATC-ATCCCTCTCCTCCAATT 77 Query 78 CGCCCGTCTCCTCCTCCGTCACCGCCGTATCGTCTCCGTAGACGACGAA-GAACCAAC-C 135 || ||||||||||||||||| || | ||| | | | ||| ||||| | | Sbjct 78 CGGTCGTCTCCTCCTCCGTCA---CC--A------CCGCA-A--A-GAACCAACCATCTC 122 Query 136 ATT-TCCGTCACCGTCTTCACCACCCCAAAAAACCAACCATTCGTCTCAAACTTCCTCTC 194 || ||||||||||||||||||| || || |||||||| ||| ||||| |||||||||| Sbjct 123 CTTCACCGTCACCGTCTTCACCACTCCTAAGAACCAACCTTTCATCTCAGACTTCCTCTC 182 Query 195 TGACGTCGCATCATCTATCAAAGTAATCTCCCTCCCTTTCCCTGAAAACATCGCCGGAAT 254 |||| ||| | |||||||| || || ||||||||||| ||||||||| ||||||| Sbjct 183 GGACG-CGC--CGGAGATCAAAGTGATTTCTCTCCCTTTCCCGGAAAACATCACCGGAAT 239 Query 255 CCCTCCCGGCGTCGAGAGCACCGACATGCTCCCTTCCATATCACTTTACGTGCCCTTCAC 314 |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| Sbjct 240 CCCTCCCGGCGTCGAGAGCACCGACAAGCTCCCATCCATGTCACTTTACGTGCCCTTCAC 299 Query 315 GCGCGCAACCAAATCT-CTCCAGCCTTTCTTCGAAGCAGA-ACTCAAGAATCTTGAGAAA 372 ||||| || || || ||||| ||||||||||||| | | ||||||||||||| || Sbjct 300 ACGCGCCACGAAG-CTTCTCCAACCTTTCTTCGAAGAA-ACACTCAAGAATCTTCCTCAA 357 Query 373 GTTTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGAATCCGCCGCTAAATTT 432 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| || Sbjct 358 GTTTCTTTCATGGTCTCCGATGGATTCCTCTGGTGGACATCAGAATCCGCAGCTAAGTTC 417 Query 433 GAGATCCCGAGACTTGC-CTTCTACGGCATGAACTCCTACGCATCGGCTAT-GTGC-TC- 488 |||| || || ||| ||| ||||| || ||||| ||||| || || | || | || Sbjct 418 AAGATTCCTAGG-TTGGTCTTTTACGGTATTAACTCTTACGCCTCTGCCGTCGT-CATCT 475 Query 489 CGCCATTTCGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAATCTGATACTGAACC 548 | | |||| |||| | ||||||||| ||||||||| | | ||||||||||| ||||| Sbjct 476 CTAC-TTTCCA-ACACAAACTCTTTACCGAACCGGAAA-T-T-AAATCTGATACCGAACC 530 Query 549 GGTTACTGTACCGGATTTTCCATGGATATGTGTTAAGAAGTGTGAGT-TCGATCCG-GTT 606 ||| ||||||||||| ||||||||||| ||||||||||||||| | |||| || ||| Sbjct 531 GGTCACTGTACCGGACTTTCCATGGATCCATGTTAAGAAGTGTGA-TCTCGA-CCATGTT 588 Query 607 -TTGACCGAACCGGATCAATC-GGATCCAGCGTT-CGAGCTACTCATTGACCATCTTATG 663 || ||||| || | ||||| || |||||| | ||| ||| |||| ||||| | || Sbjct 589 CTT-ACCGATCCAAAACAATCAGG-TCCAGC-TCACGAACTATTCATAGACCAAATGATT 645 Query 664 TCCACCAAGAAAAGCCGTGGAGTTAT-AGTGAACAGCTTT-TACGAGCTCGAGTCAACGT 721 || |||| | ||||| ||| ||| | ||| || || ||| ||||||||||||||| | | Sbjct 646 TCGACCACCACAAGCCATGG-GTTTTTAGTCAATAG-TTTCTACGAGCTCGAGTCAGCAT 703 Query 722 TCGTTGACTAC--CGGCT--CCGTGATAACGAT-GAACCAAAACCGTGGTGTGTTGGGCC 776 | ||||| | | | | || | | ||| || ||||| |||||||||||||||| Sbjct 704 TTGTTGATTGCAACAA-TAACC-TC-TCT-GATAGA-CCAAAGTCGTGGTGTGTTGGGCC 758 Query 777 TTTGTGTTTGGTAAATCCTCCAAAACCGGAGAGTGATAAACCGGATTGGATTCATTGGTT 836 |||||||| ||||||| ||| || |||||| |||||||| ||||||||||||||| Sbjct 759 ACTGTGTTTGACCGATCCTCCTAAATCGAAGAGTGCTAAACCGGCTTGGATTCATTGGTT 818 Query 837 GGACCGGAAACTAGAGGAAAGATGTCCGGTTATGTATGTGGCGTTTGGAACGCAGGCTGA 896 ||||||||| | ||| || | |||||||| |||| |||||||||||||||||||| || Sbjct 819 GGACCGGAAGCGAGAAGAGGGGCGTCCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGA 878 Query 897 GATATCGAACGAGCAGCTCAAGGAAATAGCATTAGGGTTGGAAGATTCCAAGGTCAA-TT 955 |||||||||| |||||||||||||| |||| ||||| ||||||||||||||||| || || Sbjct 879 GATATCGAACAAGCAGCTCAAGGAACTAGCTTTAGGCTTGGAAGATTCCAAGGTGAACTT 938 Query 956 TCTTGTGGGTCACGAGAAAGGACTTGGAAGA-AGTAACTGGAGGATTAGGGTTCGAAA-A 1013 ||| ||||||||||||||| ||| ||||||| | || ||||| | ||| ||| || | Sbjct 939 TCT-GTGGGTCACGAGAAAAGACGTGGAAGAGACTAT-TGGAG-A--AGGATTC-AACGA 992 Query 1014 GAGAGTGAA-AGAGCA-TGGGATGATTGTGAGAGATTGGGTAGACCAATGGGAGATATTG 1071 ||| | || |||| | ||||||||| |||||||||||||| |||||||||||||||||| Sbjct 993 TAGAAT-AAGAGAG-AGTGGGATGATAGTGAGAGATTGGGTGGACCAATGGGAGATATTG 1050 Query 1072 TCACATAAAAGTGTCAAAGGGTTTTTGAGTCATTGTGGATGGAACTCGGCGCAAGAGAGT 1131 |||||| ||||||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct 1051 TCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGATGGAATTCAGCTCAAGAGAGC 1110 Query 1132 ATTTGCGCTGGGGTTCCACTACTCGCTTGGCCAATGATGGCAGAGCAGCCACTCAATGCG 1191 || |||| |||||| ||| | || |||||||| |||||||| ||||| ||| |||||||| Sbjct 1111 ATATGCGTTGGGGTCCCATTGCTGGCTTGGCCGATGATGGCCGAGCAACCATTCAATGCG 1170 Query 1192 AAGTTGGTAGTGGAGGAGCTAAAGATCGGAGTAAGAATCGAAACAGAAGATGTAAGTGTG 1251 ||| |||| ||||||||| ||||| ||||||||||| | ||||| ||||||| ||||| Sbjct 1171 AAGATGGTTGTGGAGGAGATAAAGGTCGGAGTAAGAGTTGAAACGGAAGATGGGAGTGTA 1230 Query 1252 AAAGGATTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTGATGGAGGGAGAG 1311 ||||| |||||||||||||| ||||| ||||||||||||||| || | ||||| ||||| Sbjct 1231 AAAGGTTTCGTGACAAGAGAGGAACTAAGTCGAAAGGTTAAAGAACTAATGGAAGGAGAA 1290 Query 1312 ATGGGGAAGACAACGATGAAGAA-TGTAAAAGAGTA-TGCGAAAATGGCGAAAAA-AGCT 1368 | ||| || || | | ||| || ||| ||||| || | | |||||||| |||| |||| Sbjct 1291 ACGGGAAAAACCGCAA-GAAAAAATGTGAAAGAATACT-CAAAAATGGC-AAAAGCAGCT 1347 Query 1369 ATGGCTC-AAGGGACTGGTTCGTCTTGGAAGAGTTTGGATTCGCTTCTGGAAG-AGCTT- 1425 ||| || |||||||||||||||||||||||| ||| |||| |||||| ||| || || Sbjct 1348 TTGG-TCGAAGGGACTGGTTCGTCTTGGAAGAATTTAGATTTGCTTCTT-AAGGAG-TTA 1404 Query 1426 TGTAAGAGTAGAGAGCCAGACGGTGTTAATAAGTTG 1461 || ||||||| ||||||| |||||||| |||||||| Sbjct 1405 TGCAAGAGTAAAGAGCCAAACGGTGTTTATAAGTTG 1440 > Ahg480568 jgi|Araly1|480568|fgenesh2_kg.3__3269__AT2G16890.2 Length=1637 Score = 1013 bits (548), Expect = 0.0 Identities = 1177/1468 (80%), Gaps = 93/1468 (6%) Strand=Plus/Plus Query 19 CATCATGCGGTTCTCTTCCCTTACATGTCAAAAGGCCACA-CGATTCCTCTCCTCCAATT 77 ||||| | ||| |||||||||||||||||||||||||||| | || || ||||||||||| Sbjct 72 CATCACGTGGTCCTCTTCCCTTACATGTCAAAAGGCCACATC-ATCCCCCTCCTCCAATT 130 Query 78 CGCCCGTCTCCTCCTCCGTCACCGCCGTATCGTCTCCGTAGACGACGAA-GAACCAAC-C 135 || ||||||||||||||||| || | ||| | | | ||| ||||| | | Sbjct 131 CGGTCGTCTCCTCCTCCGTCA---CC--A------CCGCA-A--A-GAACCAACCATCTC 175 Query 136 ATT-TCCGTCACCGTCTTCACCACCCCAAAAAACCAACCATTCGTCTCAAACTTCCTCTC 194 || ||||||||||||||||||| || || |||||||| ||| ||||| |||||||||| Sbjct 176 CTTCACCGTCACCGTCTTCACCACTCCTAAGAACCAACCTTTCATCTCAGACTTCCTCTC 235 Query 195 TGACGTCGCATCATCTATCAAAGTAATCTCCCTCCCTTTCCCTGAAAACATCGCCGGAAT 254 ||| ||| | |||||||| || || ||||||||||| ||||||||| ||||||| Sbjct 236 GGAC-ACGC--CGGAGATCAAAGTCATTTCTCTCCCTTTCCCGGAAAACATCACCGGAAT 292 Query 255 CCCTCCCGGCGTCGAGAGCACCGACATGCTCCCTTCCATATCACTTTACGTGCCCTTCAC 314 |||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||| Sbjct 293 CCCTCCCGGCGTCGAGAGCACCGACAAGCTCCCTTCCATGTCACTTTTCGTTCCCTTCAC 352 Query 315 GCGCGCAACCAAATCT-CTCCAGCCTTTCTTCGAAGCAGA-ACTCAAGAATCTTGAGAAA 372 ||||| || || || ||||| ||||||||||| | | | ||||||||||||| || Sbjct 353 ACGCGCCACGAAG-CTTCTCCAACCTTTCTTCGAGGAA-ACACTCAAGAATCTTCCTCAA 410 Query 373 GTTTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGAATCCGCCGCTAAATTT 432 ||||||||||||||||||||||||||| | ||||||||||||||||| || ||||| || Sbjct 411 GTTTCTTTCATGGTCTCCGATGGATTCCTCTGGTGGACATCGGAATCTGCAGCTAAGTTC 470 Query 433 GAGATCCCGAGACTTGC-CTTCTACGGCATGAACTCCTACGCAT-CGGCTATGTGC-TCC 489 |||| || || ||| |||||||||||||||||| ||| | | | ||||| | | || Sbjct 471 AAGATTCCTAGG-TTGGTCTTCTACGGCATGAACTCTTACTC-TGCCGCTATCTCCATCT 528 Query 490 GCCATTT-CGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAATCTGATACTGAACC 548 | ||| | |||| | ||||||||| ||||||||| | ||||||||||| ||||| Sbjct 529 -CTGTTTTCAA-ACACAAACTCTTTACCGAACCGGAAACT---AAATCTGATACCGAACC 583 Query 549 GGTTACTGTACCGGATTTTCCATGGATATGTGTTAAGAAGTGTGAGTTCGATCC--GGTT 606 ||| ||||||||||| ||||||||||| | |||||||||||||| ||||| || ||| Sbjct 584 GGTCACTGTACCGGACTTTCCATGGATCCGAGTTAAGAAGTGTGATTTCGA-CCATGGTA 642 Query 607 TTGACCGAACCGGATCAATC-GGATCCAGCGTTCGAGCTA-CTCATTGACCATCTTATGT 664 | ||||| || | |||| || | |||| || || || || || ||||| | |||| Sbjct 643 CT-ACCGATCCCAAAGAATCAGG-TGCAGCCTTAGAATTATCT-ATGGACCAAATCATGT 699 Query 665 CCACCAAGAAAAGCCGTGGAGTTAT-AGTGAACAGCTTTTACGAGCTCGAGTCAACGTTC 723 | | ||| | ||||| ||| ||| | ||| || ||||| ||||||||||| ||||| || Sbjct 700 CGAACAATACAAGCCATGG-GTTTTTAGTCAATAGCTTCTACGAGCTCGAATCAACATTT 758 Query 724 GTTGACTA---C--CGGCTCCGTGATAACGATGAACCAAAACCGTGGTGTGTTGGGCCTT 778 ||||| || | | ||| |||| | | || ||||| |||||||||||||||| Sbjct 759 GTTGATTATAACAACAACTC--TGATGAT-A-GA-CCAAAGTCGTGGTGTGTTGGGCCAC 813 Query 779 TGTGTTTGGTAAATCCTCCAAAACCGGAGAGTGATAAACCGGATTGGATTCATTGGTTGG 838 |||||||| | ||||||| ||||||| ||| | |||||||| ||||||||||||||||| Sbjct 814 TGTGTTTGACAGATCCTCCTAAACCGGGGAGGGCTAAACCGGCTTGGATTCATTGGTTGG 873 Query 839 ACCGGAAACTAGAGGAAAGATGTCCGGTTATGTATGTGGCGTTTGGAACGCAGGCTGAGA 898 | ||||| | ||||||| | |||||||| |||| |||||||||||||||||||| |||| Sbjct 874 ATCGGAAGCGAGAGGAAGGGCGTCCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGAGA 933 Query 899 TATCGAACGAGCAGCTCAAGGAAATAGCATTAGGGTTGGAAGATTCCAAGGTCAA-TTTC 957 |||||||| ||||||| | |||| |||| ||||| ||||||||||| ||||| || |||| Sbjct 934 TATCGAACAAGCAGCTTATGGAACTAGCTTTAGGCTTGGAAGATTCTAAGGTGAACTTTC 993 Query 958 TTGTGGGTCACGAGAAAGGACTTGGAAGA-AGTAACT-GGAGGATTAGGGTTCGAAA-AG 1014 | ||||||||| ||||| ||| |||| || | | || |||| | ||| ||| || | Sbjct 994 T-GTGGGTCACAAGAAAAGACGTGGAGGAGATT--CTTGGAG-A--AGGATTC-AACGAT 1046 Query 1015 AGAGTGAA-AGAGCA-TGGGATGATTGTGAGAGATTGGGTAGACCAATGGGAGATATTGT 1072 ||| | || |||| | ||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 1047 AGAAT-AAGAGAG-AGTGGGATGATAGTGAGAGATTGGGTGGACCAATGGGAGATATTGT 1104 Query 1073 CACATAAAAGTGTCAAAGGGTTTTTGAGTCATTGTGGATGGAACTCGGCGCAAGAGAGTA 1132 ||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||| | Sbjct 1105 CACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGATGGAACTCAGCGCAAGAGAGCA 1164 Query 1133 TTTGCGCTGGGGTTCCACTACTCGCTTGGCCAATGATGGCAGAGCAGCCACTCAATGCGA 1192 | |||| |||||| ||| | || |||||||| |||||||| ||||| || |||||||||| Sbjct 1165 TATGCGTTGGGGTCCCATTGCTGGCTTGGCCGATGATGGCCGAGCAACCGCTCAATGCGA 1224 Query 1193 AGTTGGTAGTGGAGGAGCTAAA-GATCGGAGTAAGAATCGAAACAGAAGATGTAAGTGTG 1251 | |||| ||||| ||| |||| | ||||||||||| | ||||| ||||||| ||||| Sbjct 1225 AAATGGTTGTGGATGAGATAAAAG-TCGGAGTAAGAGTTGAAACGGAAGATGGGAGTGT- 1282 Query 1252 A-AAGGATTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTGATGGAGGGAGA 1310 | ||||||||||||||||||| ||||| ||||||||| ||||| || | ||||| ||||| Sbjct 1283 ACAAGGATTCGTGACAAGAGAGGAACTAAGTCGAAAGATTAAAGAACTAATGGAAGGAGA 1342 Query 1311 GATGGGGAAGA-CAACGATGAA-GAATGTAAAAGAGTA-TGCGAAAATGGCGAAAAA-AG 1366 | ||| || | | ||| ||| |||||| ||||| || | | |||||||| |||| || Sbjct 1343 AACGGGAAA-ATCTGCGA-GAAAGAATGTGAAAGAATACT-CAAAAATGGC-AAAAGCAG 1398 Query 1367 CTATGGCTC-AAGGGACTGGTTCGTCTTGGAAGAGTTTGGATTCGCTTCTGGAA-GAGCT 1424 || ||| || |||||||||||||||||||||||| || |||| | |||| || || || Sbjct 1399 CTTTGG-TCGAAGGGACTGGTTCGTCTTGGAAGAACTTAGATTTGATTCTT-AATGA-CT 1455 Query 1425 T-TGTAAGAGTAGAGAG-CCAGACGGTG 1450 | |||||||||||||| ||| |||||| Sbjct 1456 TATGTAAGAGTAGAGATTCCA-ACGGTG 1482 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55345125985 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5