BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G15980.1 Length=2540 Score E Sequences producing significant alignments: (Bits) Value Ahg488448 jgi|Araly1|488448|fgenesh2_kg.6__1582__AT5G15980.1 3517 0.0 Ahg927732 jgi|Araly1|927732|scaffold_300189.1 1432 0.0 Ahg908198 jgi|Araly1|908198|Al_scaffold_0002_1279 857 0.0 Ahg891288 jgi|Araly1|891288|Al_scaffold_0007_3274 773 0.0 > Ahg488448 jgi|Araly1|488448|fgenesh2_kg.6__1582__AT5G15980.1 Length=2420 Score = 3517 bits (1904), Expect = 0.0 Identities = 2283/2459 (93%), Gaps = 53/2459 (2%) Strand=Plus/Plus Query 47 AAATCAAAATCCTCACTAAAACCCTAACATTTCCCAGAGCTTCGCAATCGCTGTTCTTCA 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 AAATCAAAATCCTCACTAAAACCCTAACATTTCCCAGAGCTTCGCAATCGCTGTTCCTCC 60 Query 107 GTCTCGCTTC-TTTGTAAACTGTAAAGGATCAAGCTTTTCT-ATTCAGATCAAATCCACT 164 |||| | || ||| | | ||||||||||||||||| | ||||||||||| |||| Sbjct 61 GTCT--C-TCGTTTCT--TC-CTAAAGGATCAAGCTTTT-TGATTCAGATCAAGTCCA-A 112 Query 165 TCA-CTATACCCTTTTTTAGTTTCGTTAACCCAGCTCAAATCCGAGATGAGATATCAACA 223 | | | ||| ||||| || ||||| |||||||| ||||||||||||||||||||||||| Sbjct 113 TAACCGATAGCCTTTGGTATTTTCGGTAACCCAGATCAAATCCGAGATGAGATATCAACA 172 Query 224 ATGGCGATTGATGCTTCTTCGAAGCTACCATCGTTCTCATCTTCCTTATCTATCTCCTTG 283 |||||||||| |||||||||| | ||||||||| ||||| | | || |||||||| Sbjct 173 ATGGCGATTGCTGCTTCTTCGTACCTACCATCGATCTCA---T-C----CT-TCTCCTTG 223 Query 284 TTCTCAGGTAACCTCCATTTCATCGCGATCTTTCTCTTCTTTCATTCA-C--C---CTGG 337 |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||| Sbjct 224 TTCTCAGGTAACCTCCATTTCAACGCGATCTTTCTCTTCTTTCATTCACCTACGTTCTGG 283 Query 338 GATCGGAGCTTTGCAACAAAGTGAACAACTTTGTCCCTTACGATCCCCAATGACGAGCTC 397 ||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||| Sbjct 284 GATCGGAGCTTTGCAACAAAGCGAACAACTTGGTTCCTTACGATCCCCAATGAAGAGCTC 343 Query 398 TGGCA-ACTTAGTGAAATCAGTGGGTCGAAGCTTCTCGTCCGAGCCTGCGGTTGAAGAGA 456 ||| | ||| | || |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 344 TGG-ATCCTTTGGGATATCAGTGGGTCGAAGCTTCTCGTCTGAGCCTGCGGTTGAAGAGA 402 Query 457 AATCTTCTGCTGAGGCTACCGTGATTGATATTTTTAGTAGATTGAGTGGTGAGGATGAGA 516 ||||||||||||||| || |||||||||||| || || |||||||||||||||||||| | Sbjct 403 AATCTTCTGCTGAGGTTATCGTGATTGATATCTTCAGCAGATTGAGTGGTGAGGATGATA 462 Query 517 TTAGGAAGGAGTTGGAATCGAGTGGTGTAGTGATTAGCCAAGATTTAGCTTTGAAGGTTT 576 ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| Sbjct 463 TTAGGAAAGAGTTGGAATCGAGTGATGTAGTGATTAGCCAGGACTTAGCTTTGAAGGTTT 522 Query 577 TGAGAAAGCTCGAATCAAACCCTGATGTTGCCAAAAGTTTTTTCCAGTGGATTAAGGAGG 636 |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct 523 TGAGAAAGCTCGAATCAAACCCCGATGTTGCGAAAAGGTTTTTCCAGTGGATTAAGGAGG 582 Query 637 CTTCTCCTGAGGAACTTAGCTCGAAGAACTATAACATGATGCTGCGGATTCTGGGTGGTA 696 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 583 CTTCTCCTGAGGAACTTAGCTCGAAGAACTATAACATGATGCTGCGTATTCTGGGTGGTA 642 Query 697 ATGGACTTGTTGATGAGTTTTGGGGGTTGGTTGATGTGATGAAGAAGAAAGGGCATGGTT 756 |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 643 ATGGACTTGTCAATGAGTTTTGGGGGTTGGTTGATGTGATGAAGAAGAAAGGACATGGTT 702 Query 757 TATCGGCTAATGTTAGAGATAAAGTGGGTGACAAATTTCAGAAAGATGGGCTGGAGAGTG 816 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct 703 TATCGGCTAATGTTAGGGATAAAGTAGGTGAGAAATTTCAGAAAGATGGGCTGGAGAGTG 762 Query 817 ATTTGCTGAGGCTGAGAAAGCTTTTTACTTCAGATTGTTTAGATAATTCGGCGGAGAATG 876 ||||| || | || |||||| ||||| |||||||||||||||||| |||||||||||||| Sbjct 763 ATTTGGTGCGACTTAGAAAGTTTTTTGCTTCAGATTGTTTAGATAGTTCGGCGGAGAATG 822 Query 877 TTTGCGATAGGGTGTGTAAGATTGTGATGAAGGAAGAATGGGGTGATGATGTAGAGAAAC 936 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 823 TTTGCGATAGGGTGTGTAAGATTGTGATGAAGGAAGAATGGGGTGATGATGTGGAGAAAC 882 Query 937 GGGTAAGAGATTTGAATGTTGAGTTTAAGAGTGATTTAGTGAAGATGATTGTGGAACGTC 996 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 883 GGGTGAGAGATTTGAATGTTGAGTTTAAGAGTGATTTAGTGAAGATGATTGTGGAAAGTC 942 Query 997 TTGATGTTGAACCCAGGAAAGCTTTGTTGTTCTTCCGGTGGATTGATGAGTCTGATCTCT 1056 ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||| | Sbjct 943 TTGATGTTGTACCTAGGAAAGCTTTGTTGTTCTTTCGGTGGATTGATGAGTCTGGTCTTT 1002 Query 1057 TTAAGCATGATGAGAAAACCTATAATGCTATGGCTAGGGTTTTGGGAAAAGAGAAGTTTC 1116 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1003 TTAAGCATGATGAGAAAACTTATAATGCTATGGCTAGGGTTTTGGGAAAAGAGAAATTTC 1062 Query 1117 TTGATAGATTTCAGAACATTGTAGTAGAAATGAGGAGTGCTGGTTATGAAGTGGAAATAG 1176 | ||||||||||||||||| || | |||||||||||||| |||||||||||||||||||| Sbjct 1063 TCGATAGATTTCAGAACATCGTTGAAGAAATGAGGAGTGTTGGTTATGAAGTGGAAATAG 1122 Query 1177 AGACTTATGTTAGAGTTTCAACGAGGTTCTGCCAGACTAAATTGATCAAGGAAGCTGTTG 1236 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1123 AGACTTATGTTAGAGTTTCAACAAGGTTCTGCCAGACTAAATTGATCAAGGAAGCTGTTG 1182 Query 1237 ACTTGTTTGAGATTGCAATGGCAGGTAGTAGTAGTAGTAACAACCCCACCCCACACTGCT 1296 |||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| Sbjct 1183 ACTTGTTTGAGATTGCTATGGCA-G--GTAGTAGTAGTAACAAACCCACCCCACACTGCT 1239 Query 1297 TCTGTTTGTTGCTCAAGAAAATTGTCACTGCCAAGATTCTAGATATGGATTTGTTTTCAA 1356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1240 TCTGTTTGTTGCTCAAGAAAATTGTCACTGCCAAGATTCTAGATATGGATTTGTTTTCAA 1299 Query 1357 GAGCTGTGAAAGTTTATACCAAAAATGGTAATGCTTTGACGGATTCCTTGCTGAAATCTG 1416 ||||| |||||| |||||||| ||||||||||||| |||||||||||||||| ||||| | Sbjct 1300 GAGCTCTGAAAGCTTATACCAGAAATGGTAATGCTATGACGGATTCCTTGCTAAAATCCG 1359 Query 1417 TCTTAAAGTCCTTGAGAAGCGTGGATAGGGTTGAACAGAGCAATGAGCTGTTGAAAGAAA 1476 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1360 TCTTAAAGTCCTTGAGAAGCGTGGATAGGGTTGAACTGAGCACTGAGCTGTTGAAAGAAA 1419 Query 1477 TGAAGAGAGGAGGCTATGTTCCTAGTGGTGATATGCAGAGCATGATTGCATCAAGTCTTA 1536 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1420 TGAAGAAAGGAGGTTATGTTCCTAGTGGTGATATGCAGAGCATGATTGCATCAAGTCTTA 1479 Query 1537 GTCGTAAGGGAAAGAAGGACGAAGCTGATGAATTTGTAGACTTTATGGAATCATCCGGAA 1596 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 1480 GTCGTAAGGGAAAGAAGGATGAAGCTGATGAATTTGTAGACTTTATGGAAGCATCCGGAA 1539 Query 1597 ACAATCTAGATGACAAGGCAATGGCGTCTCTTGTTGAAGGGTATTGTGATTCCGGGAATC 1656 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 1540 ATAATCTAGATGACAAGGCAATGGCGTCTCTTGTTGAAGGGTATTGTGATTCTGGGGATC 1599 Query 1657 TTGATGAAGCTTTAGTGTGTTTCGAGAAAATGGTTGGAAACACGGGAGTCTCCTATGCTG 1716 ||||||||||||||||||||||||||||||||||||||||| ||| || || |||||| | Sbjct 1600 TTGATGAAGCTTTAGTGTGTTTCGAGAAAATGGTTGGAAACGCGGCAGCCTTCTATGCCG 1659 Query 1717 ATTATTCATTTGAGAAGTTGGTTCTTGCTTATTGCAACAAGAATCAAGTAAGAGATGCAT 1776 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1660 ATTATGCATTTGAGAAGTTGGTTCTTGCTTATTGCAACAAGAATCAAGTAAGAGACGCAT 1719 Query 1777 ACAAGCTTTTGAGTGCACAAGTAAC-GAAAAATCAACTGAAACCTCGTCATAGCACATAC 1835 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||| Sbjct 1720 ACAAGCTTTTGAGTGCACAAGT-ACAGAAAAATCAGCTGAAACCTCGTCATAGCACGTAC 1778 Query 1836 AAAAGCTTGGTGACGAATCTGTTGACGAAGAAGATTGCAAGGGATGGTGGGTTTGAAGAA 1895 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1779 AAAATCTTGGTGACGAATCTGTTGATAAAGAAGATTGCAAGGGATGGTGGGTTTGAAGAA 1838 Query 1896 GCTTTGAGTCTTCTACCGATAATGAAAGATCACGGGTTCCCTCCTTTCATTGACCCTTTC 1955 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1839 GCTTTGAGTCTTCTACCGATAATGAAAGATCACGGGTTCCCTCCTTTCATTGACCCTTTC 1898 Query 1956 ATGAGTTACTTCTCATCAACTGGAAAAAGCACTGAAGCTCTCGGTTTTTTGAAGGCTATG 2015 ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1899 ATGAGTTACTTCTCAACAACTGGAAAAAGCACAGAAGCTCTCGGTTTTTTTAAGGCTATG 1958 Query 2016 ACCTCGAATAACTTTCCATATATATCAGTGGTTCTGCGTGTATTCGAAACTATGATGAAG 2075 |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 1959 ACCTCGAAGAACTTTCCATCTATGTCAGTGGTTCTGCGTGTATTCGAAACTATGATGAAG 2018 Query 2076 TCTGCAAGACACAGTGAAGCACAAGATTTACTCTCTCTGTGCCCAAACTATATCCGTAAT 2135 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2019 TCTGCAAGACACAGTGAAGCACAAGATTTACTCTCTCTGTGCCCAAACTATATCCGTAAC 2078 Query 2136 AATCCGGATGTTCTAGAACTCTTCAATACCATGAAACCCAACGAATCTGCTGTAGAAAAA 2195 |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| Sbjct 2079 AATCCGGATGTTCTAGAACTCTTCAATACCATGAAACCTAACGAGTCTACTGTAGAAAAA 2138 Query 2196 CCTTTGGCTGCTTCTGCTTAGCTCCAGTTTTAGTTTACATTCCTTC-AAGTCTTTTTGGT 2254 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 2139 CCTTTGGCTGCTTCTGCTTAGCTCCAGTTTTAGTTTACATTCCTCCCAAGTCTTTTTGGT 2198 Query 2255 TTCTGGGCATTTGATTCAAATAATTT-GGCCAGAA-TATTTCCTGCTGTTCCCTTTTGTT 2312 ||||||| ||||||||| || ||||| || ||||| ||||||| |||||||||||||||| Sbjct 2199 TTCTGGGGATTTGATTCTAA-AATTTTGGTCAGAAATATTTCCCGCTGTTCCCTTTTGTT 2257 Query 2313 TACATGTATCACTCACCAGTCACCAGTTAACTTTCTTCATCAACCTGGTGCACTGGCAAA 2372 |||||||| || |||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 2258 TACATGTA--AC--ACCATTCACCAGTTAACTGTCTTCATCAACCTGGTGCACTGGCAAA 2313 Query 2373 ATAATTTTAAGGTACTATGtttttttATATTCCACTTGCTTATCATCTTATGCTTCTTGG 2432 |||||||||||||||||||| |||||| ||||||||||||||||||||||||| | | Sbjct 2314 -TAATTTTAAGGTACTATGTTCTTTTATTTTCCACTTGCTTATCATCTTATGCTA-T-G- 2369 Query 2433 CTCTGCCATGGATTGTTCCGTGTATCATCATTATTTGTTAACAAGATCTGTCTGTAACT 2491 | | ||||||||||||| ||||||| | ||||||||||||||||| ||||||||| Sbjct 2370 C-C----ATGGATTGTTCCGAGTATCAT--T-ATTTGTTAACAAGATCTTTCTGTAACT 2420 > Ahg927732 jgi|Araly1|927732|scaffold_300189.1 Length=2044 Score = 1432 bits (775), Expect = 0.0 Identities = 1488/1825 (82%), Gaps = 77/1825 (4%) Strand=Plus/Plus Query 423 CGAAGCTTCTCGTCCGAGCCTGCGGTTGAAGAGAAATCTTCTGCTGAGGCTACCGTGATT 482 |||||||| || || ||||||||| ||||||||||| ||||||||||| | |||||| Sbjct 228 CGAAGCTTTTCATCTGAGCCTGCGATTGAAGAGAAACCTTCTGCTGAGACGGTTGTGATT 287 Query 483 GATATTTTTAGTAGATTGAGTGGTGAGGATGAGATTAGGAAGGAGTTGGAATCGAGTGGT 542 ||| ||||||| |||||||||| | ||||||| ||| |||| ||| |||| |||| || | Sbjct 288 GATGTTTTTAGCAGATTGAGTGCTAAGGATGATATTTGGAAAGAGCTGGATTCGAATGAT 347 Query 543 GTAGTGATTAGCCAAGATTTAGCTTTGAAG-GTTTTGA-GAAAGCTCGAATCAAACCCTG 600 || ||||||||||| || ||||| ||| || ||| ||| | || || ||||||| ||||| Sbjct 348 GTTGTGATTAGCCATGAATTAGCATTG-AGAGTTCTGAGGGAA-CTTGAATCAAGCCCTG 405 Query 601 ATGTTGCCAAAAGTTTTTTCCAGTGGATTAAGGAGGCTTCTCCT-GAGGAACT-TAGCTC 658 ||||||| ||| |||||| ||||| || |||||||| |||| || |||| | ||| Sbjct 406 ATGTTGCGGGAAGGTTTTTCAAGTGGGTTTTGGAGGCTTATCCTCGA-AAACTCT-CCTC 463 Query 659 GAAGAACTATAACATGATGCTGCGGATTCTGGGTGGTAATGGACTTGTTGATGAGTTTTG 718 |||| ||||||| ||||||||| ||||| |||| |||||||||||||||||| ||||| Sbjct 464 CAAGAGTTATAACACGATGCTGCGTATTCTTGGTGTTAATGGACTTGTTGATGAATTTTG 523 Query 719 GGGGTTGGTTGATG-TGATGAAGAAGAAAGGGCATGGT-TTATCGGCTAATGTTAGAGAT 776 || ||||||||||| | ||||||||||||||||||||| || || ||||||||||| || Sbjct 524 GGAGTTGGTTGATGCT-ATGAAGAAGAAAGGGCATGGTGTT-TCAGCTAATGTTAGGGAC 581 Query 777 AAAGTGGGTGACAAATTTCAGAAAGATGGGCTGGAGAGTGATTTGCTGAGGCTGAGAA-A 835 |||||||||||||| |||| ||||||||| ||||| ||||||||| |||||| | || | Sbjct 582 AAAGTGGGTGACAAGTTTCTGAAAGATGGACTGGAAAGTGATTTGGAGAGGCTTA-AAGA 640 Query 836 GCTTTTTACTTCAGATTGTTTAGATAATTCGGCGGAGAATGTTTGCGATAGGGTGTGTAA 895 | ||||| |||||| || | | |||||||||| ||| || |||||| ||||||||||||| Sbjct 641 GATTTTTGCTTCAGGTTCTATGGATAATTCGGTGGATAAGGTTTGCAATAGGGTGTGTAA 700 Query 896 GATTGTGATGAAGGAAGAATGGGGTGATGATGTAGAGAAACGGGTAAGAGATTTGAATGT 955 ||||||||||||||||| ||| ||| |||||| ||||||| | |||| |||||||| | Sbjct 701 GATTGTGATGAAGGAAGTGTGGAGTGCTGATGTGGAGAAACAGCTAAGGGATTTGAA-GC 759 Query 956 T-GAGTTTAAGAGTGATTTAGTGAAGATGAT-TGTGGAACGTCTTGATGTTGAACCCAGG 1013 | |||||||| |||||| | ||||||||| | | ||||| ||||| || || || ||| Sbjct 760 TCGAGTTTAAAAGTGATCTGGTGAAGATGGTAT-TGGAAAAACTTGACGTGGATCCGAGG 818 Query 1014 AAAGCTTTGTTGTTCTTCCGGTGGATTGATGAGTCTGATCTCTTT-AAGCATGATGAGAA 1072 |||||||| |||||||| |||||||||||||||||| | ||| |||||||||||||| Sbjct 819 AAAGCTTTATTGTTCTTTAGGTGGATTGATGAGTCTGG-CAGTTTTAAGCATGATGAGAA 877 Query 1073 AACCTATAATGCTATGGCTAGGGTTTT-GGGAAAAGAGAAGTTTCTTGATAGATTTCAGA 1131 || |||||||||||||| |||||||| |||||| ||||||||||||||||| |||||| Sbjct 878 GACGTATAATGCTATGGCCAGGGTTTTAGGGAAA-GAGAAGTTTCTTGATAGGTTTCAGC 936 Query 1132 ACATTGTAGTAG-AAATGAGGAGTGCTGGTTATGA-AGTGGAAATAGAGACTTATGTTAG 1189 |||| ||| || |||| ||||||||||| || || | ||||||| |||||||||||||| Sbjct 937 ACATCATAG-AGGAAATTAGGAGTGCTGGCTACGAGA-TGGAAATGGAGACTTATGTTAG 994 Query 1190 AGTTTCAACGAGGTTCTGCCAGACTAAATTGATCAAGGAAGCTGTTGACTTGTTTGAGAT 1249 |||||| | |||||||| ||||||||| |||| || ||||||||||| ||||| ||| | Sbjct 995 GGTTTCAGCAAGGTTCTGTCAGACTAAAATGATTAAAGAAGCTGTTGAATTGTTCGAGTT 1054 Query 1250 TGCAATGGCAGGTAGTAGTAGTAGTAACAACCCCACCCCACACTGCT-TCTGTTTGTTGC 1308 ||||||||| || |||| | | | || ||| ||||||||||||| | |||| ||| Sbjct 1055 TGCAATGGC-GG--GTAGCA--AC-A-CA-CCC-ACCCCACACTGCTGTA-GTTTACTGC 1104 Query 1309 TCAAGAAAATTGTCACTGCCAAGAT-TCTAGATATGGATTTGTTTTCAAGAGCTGTGAAA 1367 |||||||||||||||||||||||| | | || ||||| |||||| ||||| |||||||| Sbjct 1105 TCAAGAAAATTGTCACTGCCAAGAAAT-TGGACATGGACTTGTTTACAAGAACTGTGAAA 1163 Query 1368 GTTTATACCAAAAATGGTAATGCTT-TGACGGATTCCTTGCTG-AA-ATCTGTCTTAAAG 1424 | |||||| ||||| || | || || ||||||| ||||| || || || || || | Sbjct 1164 GCTTATACTGGTAATGGCAACG-TTGTGCCGGATTCAATGCTGCAACATGTG-CTCAA-G 1220 Query 1425 TCCTTGAGAAGCGTGGATAGGGTTGAACAGAGCAATGAGCTGTTGAAAGAAATGAA-GAG 1483 || ||||||||||| |||||| ||| ||||||||||||| ||||||||| |||||| || Sbjct 1221 TCTTTGAGAAGCGTTGATAGGTTTGGACAGAGCAATGAGGTGTTGAAAGCAATGAACGA- 1279 Query 1484 AGGAGGCTATGTTCCTAGTGGTGATATGCAGAGCATGATTGCATCAAGTCTTAGTCGTAA 1543 ||| || ||||||||||| |||||| ||||||| |||||||||| | ||||||||||| Sbjct 1280 AGGTGGTTATGTTCCTAGCGGTGATTTGCAGAGTGTGATTGCATCGGGACTTAGTCGTAA 1339 Query 1544 GGGAAAGAAGGACGAAGCTGATGAATTTGTAGA-CTTTATGGAATCATCCGGAAA-CAAT 1601 ||| ||||| || ||||| | ||| |||| || |||||||||| | || ||||| || | Sbjct 1340 GGGGAAGAAAGATGAAGCAAACGAACTTGT-GAACTTTATGGAAGCCTCTGGAAATCATT 1398 Query 1602 CTAGATGACAAGGCAATGGCGTCTCTT-GTTGAAGGGTATTGTGATTCCGG-GAATCTTG 1659 |||||||||| |||||||| ||| || ||||||||| |||||||| | || ||| | Sbjct 1399 -TAGATGACAAAGCAATGGCATCT-TTAGTTGAAGGGCATTGTGATGCTAAAGA-TCTCG 1455 Query 1660 ATGAAGCTTTAGTGTGTTTCGAGAAAATGGTTGG-AAACACGGGAGTCTCCTATGCTGAT 1718 | ||||||| || ||||||| |||| ||| |||| ||| | ||||||||| ||||| | | Sbjct 1456 AAGAAGCTTCAGAGTGTTTCAAGAAGATGATTGGGAAAGA-GGGAGTCTCTTATGCAGGT 1514 Query 1719 TATTCATTTGAGAAGTTGGTTCTTGCTTATTGCAACAAGAAT-CAAGTAAGAGATGCATA 1777 ||| |||||||||||||||| |||||||||||||||| | | || | |||||||| ||| Sbjct 1515 TATGCATTTGAGAAGTTGGTACTTGCTTATTGCAACA-GTTTTCAGGCAAGAGATGTATA 1573 Query 1778 CAAGCTTTTGAGTGCA-CAAGT-AA-CGAAAAATCAACTGAAACCTCGTCATAGCACATA 1834 ||||||||| | | | | ||| || | |||| ||| |||||||| | || || ||||| Sbjct 1574 CAAGCTTTTCACCG-AGCTAGTGAAAC-AAAA-TCAGTTGAAACCTTGGCACAGTACATA 1630 Query 1835 CAAAAGCTTGGTGACGAATCTGTTGACGAAGAAGATTGCAAGGGATGGTGGGTTTGAAGA 1894 ||||| | |||||| |||||| |||| ||||||| | ||||| ||||||||||||||||| Sbjct 1631 CAAAATCATGGTGAGGAATCTATTGATGAAGAAGGTAGCAAGAGATGGTGGGTTTGAAGA 1690 Query 1895 AGCTTTGAGTCTTCTACCGATAATGA-AAGATCACGGGTTCCCTCCTTTCATTGACCCTT 1953 |||||||||||||||||| || |||| || |||||||||||||||||||| | ||||| | Sbjct 1691 AGCTTTGAGTCTTCTACCTATGATGAGAA-ATCACGGGTTCCCTCCTTTCGTGGACCCGT 1749 Query 1954 TCATG-AGTTACTTCTC-A-TCAACTGGAAAAAGCACTGAAGCTCTCGGTTTTTTGAAGG 2010 ||||| | |||||| || | | | ||||| |||| | || ||| ||| |||| |||||| Sbjct 1750 TCATGGA-TTACTTATCGAAT-AG-TGGAACAAGCGCAGAGGCTTTCGCTTTTCTGAAGG 1806 Query 2011 CTATGACCTCGAATAACTTTCCATATATAT-CAGTGGTTCTGCGTGTATTCGAAACTATG 2069 | |||| || || || ||||||| || || || |||||||||||||||| ||| ||||| Sbjct 1807 CCGTGACTTCAAAGAAGTTTCCATCTA-ATTCAATGGTTCTGCGTGTATTTGAAGCTATG 1865 Query 2070 ATGAAGTCTGCAAGACACAGTGAAGCACAAGATTTACTCTCTCTGTGCCCAAACTATATC 2129 ||||||||||||| || |||||||| || ||||| || ||| ||| ||||| |||||| Sbjct 1866 TTGAAGTCTGCAAGGCATAGTGAAGCTCAGGATTTGCTGTCTATGTCCCCAAGTTATATC 1925 Query 2130 CGTAATAATCCGGATGTTCTAGAACTCTTCAATACCATGAAACCCAACGAATCTGC-TGT 2188 ||| ||| | || ||||||||||| |||||| |||||||||| | ||| | | | | Sbjct 1926 CGTCGCAATGCAGAAGTTCTAGAACTTTTCAATTCCATGAAACCTGATAAATGTTCCT-T 1984 Query 2189 AGAAAAACCTTTGGCTGCTTCTGCT 2213 ||| ||||||||| ||||| ||||| Sbjct 1985 AGAGAAACCTTTGCCTGCTCCTGCT 2009 > Ahg908198 jgi|Araly1|908198|Al_scaffold_0002_1279 Length=537 Score = 857 bits (464), Expect = 0.0 Identities = 508/530 (96%), Gaps = 0/530 (0%) Strand=Plus/Plus Query 615 TTTTTCCAGTGGATTAAGGAGGCTTCTCCTGAGGAACTTAGCTCGAAGAACTATAACATG 674 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 TTTTTCCAGTGGATTAAGGAGGCTTCTCCTGAGGAACTTAGCTCGAAGAATTATAACATG 60 Query 675 ATGCTGCGGATTCTGGGTGGTAATGGACTTGTTGATGAGTTTTGGGGGTTGGTTGATGTG 734 ||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 61 ATGTTGCGTATTCTGGGTGTTAATGGACTTGTCGATGAGTTTTGGGGGTTGGTTGATGTG 120 Query 735 ATGAAGAAGAAAGGGCATGGTTTATCGGCTAATGTTAGAGATAAAGTGGGTGACAAATTT 794 |||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 121 ATGAAGAAGAAAGGACATGGCTTATCGGCTAATGTTAGAGATAAAGTAGGTGAGAAATTT 180 Query 795 CAGAAAGATGGGCTGGAGAGTGATTTGCTGAGGCTGAGAAAGCTTTTTACTTCAGATTGT 854 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 181 CAGAAAGATGGGCTGGAGAGTGATTTGGTGAGGCTGAGAAAGCTTTTTGCTTCAGATTGT 240 Query 855 TTAGATAATTCGGCGGAGAATGTTTGCGATAGGGTGTGTAAGATTGTGATGAAGGAAGAA 914 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTAGATAATTCGGCGGAGAATGTTTGCGATAGGGTGTGTAAGATTGTGATGAAGGAAGAG 300 Query 915 TGGGGTGATGATGTAGAGAAACGGGTAAGAGATTTGAATGTTGAGTTTAAGAGTGATTTA 974 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 301 TGGGGCGATGATGTGGAGAAACGGGTGAGAGATTTGAATGTTGAGTTTAAGAGTGATTTA 360 Query 975 GTGAAGATGATTGTGGAACGTCTTGATGTTGAACCCAGGAAAGCTTTGTTGTTCTTCCGG 1034 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 361 GTGAAGATGATTGTGGAAAGTCTTGATGTTGAACCTAGGAAAGCTTTGTTGTTCTTCCGG 420 Query 1035 TGGATTGATGAGTCTGATCTCTTTAAGCATGATGAGAAAACCTATAATGCTATGGCTAGG 1094 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 421 TGGATTGATGAGTCTGGTCTCTTTAAGCATGATGAGAAAACTTATAATGCTATGGCTAGG 480 Query 1095 GTTTTGGGAAAAGAGAAGTTTCTTGATAGATTTCAGAACATTGTAGTAGA 1144 ||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 481 GTTTTGGGAAAAGAGAAATTTCTCGATAGATTTCAGAACATCGTAGTAGA 530 > Ahg891288 jgi|Araly1|891288|Al_scaffold_0007_3274 Length=483 Score = 773 bits (418), Expect = 0.0 Identities = 458/478 (96%), Gaps = 0/478 (0%) Strand=Plus/Plus Query 615 TTTTTCCAGTGGATTAAGGAGGCTTCTCCTGAGGAACTTAGCTCGAAGAACTATAACATG 674 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4 TTTTTCCAGTGGATTAAGGAGGCTTCTCCTGAGGAACTTAGCTCGAAGAATTATAACATG 63 Query 675 ATGCTGCGGATTCTGGGTGGTAATGGACTTGTTGATGAGTTTTGGGGGTTGGTTGATGTG 734 |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 64 ATGCTGCGTATTCTGGGTGTTAATGGACTTGTCGATGAGTTTTGGGGGTTGGTTGATGTG 123 Query 735 ATGAAGAAGAAAGGGCATGGTTTATCGGCTAATGTTAGAGATAAAGTGGGTGACAAATTT 794 |||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 124 ATGAAGAAGAAAGGACATGGCTTATCGGCTAATGTTAGAGATAAAGTAGGTGAGAAATTT 183 Query 795 CAGAAAGATGGGCTGGAGAGTGATTTGCTGAGGCTGAGAAAGCTTTTTACTTCAGATTGT 854 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 184 CAGAAAGATGGGCTGGAGAGTGATTTGGTGAGGCTGAGAAAGCTTTTTGCTTCAGATTGT 243 Query 855 TTAGATAATTCGGCGGAGAATGTTTGCGATAGGGTGTGTAAGATTGTGATGAAGGAAGAA 914 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 244 TTAGATAATTCGGCGGAGAATGTTTGTGATAGGGTGTGTAAGATTGTGATGAAGGAAGAG 303 Query 915 TGGGGTGATGATGTAGAGAAACGGGTAAGAGATTTGAATGTTGAGTTTAAGAGTGATTTA 974 || || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 304 TGTGGCGATGATGTGGAGAAACGGGTGAGAGATTTGAATGTTGAGTTTAAGAGTGATTTA 363 Query 975 GTGAAGATGATTGTGGAACGTCTTGATGTTGAACCCAGGAAAGCTTTGTTGTTCTTCCGG 1034 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 364 GTGAAGATGATTGTGGAAAGTCTTGATGTTGAACCTAGGAAAGCTTTGTTGTTCTTCCGG 423 Query 1035 TGGATTGATGAGTCTGATCTCTTTAAGCATGATGAGAAAACCTATAATGCTATGGCTA 1092 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 424 TGGATTGATGAGTCTGGTCTCTTTAAGCATGATGAGAAAACTTATAATGCTATGGCTA 481 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95758875930 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5