BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G17000.1
Length=1292
Score E
Sequences producing significant alignments: (Bits) Value
Ahg941200 jgi|Araly1|941200|scaffold_601744.1 1609 0.0
Ahg941198 jgi|Araly1|941198|scaffold_601742.1 1543 0.0
Ahg941199 jgi|Araly1|941199|scaffold_601743.1 1511 0.0
Ahg903120 jgi|Araly1|903120|Al_scaffold_0003_248 859 0.0
Ahg472786 jgi|Araly1|472786|fgenesh2_kg.1__2740__AT1G26320.1 728 0.0
> Ahg941200 jgi|Araly1|941200|scaffold_601744.1
Length=1078
Score = 1609 bits (871), Expect = 0.0
Identities = 1007/1074 (94%), Gaps = 3/1074 (0%)
Strand=Plus/Plus
Query 58 GAAGAAGAATTAACGATGACGGCGACGAACAAGCAGGTGGTATTGAAAAACTACGTGAGT 117
||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 6 GAAGAAGAAACAACGATGACGGCGACAAACAAGCAGGTCATATTGAAAGACTACGTGAGT 65
Query 118 GGTTTCCCTAAGGAATCCGATTTCGATTTCAAAACCACCACCGTCGAATTTAAACTTCCG 177
|||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||
Sbjct 66 GGTTTCCCTAAGGAATCCAATTTCGATTTCAAGACCAACACCGTCGAATTTAAGGTTCCG 125
Query 178 GGAGGGTCTAACTCAGTTCTGGTGAAGAATCTCTACTTGTCATGCGATCCTTACATGAGG 237
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 126 GGAGGGTCTAATTCAGTTCTGGTGAAGAATCTCTACCTGTCATGCGATCCTTACATGCGT 185
Query 238 ATTCGCATGGGGAAACCTGATCCTTCCACTGCTGCTCTTGCTCAAGCTTACGCTCCCGGC 297
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 186 ATTCGCATGGGGAAACCTGATCCCTCCACTGCTGCTCTTGCTCAAGCTTACGCTCCCGGC 245
Query 298 AAGCCAATCTTTGGGTATGGAGTGTCTAGAGTTATAGAATCTGGGCATCCAGATTACAAG 357
|||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 246 CAGCCAATCTTTGGGTATGGAGTGTCTAGAGTTATTGAATCTGGACATCCTGATTACAAG 305
Query 358 AAAGGTGACTTACTCTGGGGGATAGTTGGATGGGAGGAGTATAGTGTTATTACTCCAATG 417
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 306 AAAGGTGATTTACTCTGGGGAATAGTTGGATGGGAGGAGTATAGTGTTATTACTCCAATG 365
Query 418 ACTCACATGCATTTCAAGATCCAACATACCGATATTCCATTATCTTACTACACTGGACTT 477
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 366 ACTCACATGCATTTCAAGATCCAACATACCGATGTTCCATTATCTTACTACGCTGGACTT 425
Query 478 CTCGGTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCTCCAAAGGAA 537
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 426 CTCGGTATGCCCGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCCCCAAAGAAA 485
Query 538 GGAGAGACAGTTTATGTGTCAGCTGCATCTGGTGCTGTTGGTCAGCTTGTGGGACAATTT 597
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 486 GGAGAGACGGTTTATGTGTCAGCTGCATCTGGTGCAGTTGGTCAGCTTGTGGGACAATTT 545
Query 598 GCTAAGATGATGGGCTGTTATGTTGTTGGAAGCGCCGGAAGTACAGAGAAGGTTGATCTT 657
|||||||||||||||||||||||||||||||| ||||| | | ||| || ||||||||
Sbjct 546 GCTAAGATGATGGGCTGTTATGTTGTTGGAAGTGCCGGTACCAAAGAAAAAGTTGATCTC 605
Query 658 CTGAAGACCAAGTTTGGGTTTGATGATGCATTTAACTACAAGGAAGAACCAGACCTTAGT 717
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 606 CTCAAGACCAAGTTTGGATTTGATGATGCATTTAACTACAAGGAAGAACCAGACCTTACT 665
Query 718 GCTGCCCTCAAAAGGTGTTT-CCCTACAGGCATTGACATATACTTTGAAAACGTAGGAGG 776
|||||||||||||||||||| ||| | |||||| |||||||||||||| |||||||||||
Sbjct 666 GCTGCCCTCAAAAGGTGTTTTCCCAA-AGGCATCGACATATACTTTGAGAACGTAGGAGG 724
Query 777 CAAAATGCTAGACGCAGTGCTATTAAACATGAACCCACACGGACGTATCGCTGTGTGTGG 836
||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||| |||||
Sbjct 725 CAAAATGCTAGACGCAGTGCTCTTAAACATGAACCCACTCGGGCGTATAGCTGTCTGTGG 784
Query 837 AATGATCTCACAGTACAATCTTGAAAACCAAGAAGGTGTACACAACCTATCCAACATAAT 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 AATGATCTCACAGTACAATCTTGAAAACCAAGAAGGTGTACACAACCTATCCAACATAAT 844
Query 897 CTACAAAAGAATCCGCATTCAAGGCTTTGCAGTGTTTGATTTCTACGAGAAATACTCAAA 956
||||||| |||||||||||||||| |||| ||| ||||||||||||| |||||||||||
Sbjct 845 CTACAAACGAATCCGCATTCAAGGGTTTGTAGTCCTTGATTTCTACGACAAATACTCAAA 904
Query 957 GTTCTTGGATTTTGTGCTTCCGCACATTAAAGAAGGGAAGATCACGTACGTGGAAGATGT 1016
||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 905 GTTCTTGGAGTTTGTGCTTCCGTGCATCAAAGAAGGGAAGATCACGTACGTGGAAGATGT 964
Query 1017 AGCTGATGGGCTTGAGAAAGGTCCTGAAGCTCTTGTGGGACTCTTCCATGGTAAGAACGT 1076
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 965 GGCTGATGGGCTTGAGAAAGCTCCTGAAGCTCTTGTGGGACTCTTCCATGGTAAGAACGT 1024
Query 1077 TGGAAAACAAGTTGTTGTTATTGCTCGTGAGTGAATATATATATCT-ATGGGAG 1129
||| |||||||||||||||||||||||||||||||||||| | | | |||||||
Sbjct 1025 TGGGAAACAAGTTGTTGTTATTGCTCGTGAGTGAATATATTTTTGTTATGGGAG 1078
> Ahg941198 jgi|Araly1|941198|scaffold_601742.1
Length=1083
Score = 1543 bits (835), Expect = 0.0
Identities = 992/1068 (93%), Gaps = 10/1068 (1%)
Strand=Plus/Plus
Query 49 TGAATCGGA-GAAGAAGAATTAACGATGACGGCGACGAACAAGCAGGTGGTATTGAAAAA 107
|||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 2 TGAATC-GAGGAAGAAGAGTTAACGATGACGGCGACGAACAAGCAGGTCATATTGAAAGA 60
Query 108 CTACGTGAGTGGTTTCCCTAAGGAATCCGATTTCGATTTCAAAACCACCACCGTCGAATT 167
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 61 CTACGTGAATGGTTTCCCTAAGGAATCCGATTTCGATTTCACAACCACCACCGTCGAACT 120
Query 168 TAAACTTCCGGGAGGGTCTAACTCAGTTCTGGTGAAGAATCTCTACTTGTCATGCGATCC 227
||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 121 TAAGGTTCCGGAAGGTTCTAACTCGGTTCTGGTGAAGAATCTCTACTTGTCATGCGATCC 180
Query 228 TTACATGAGGATTCGCATGGGGAAACCTGATCCTTCCACTGCTGCTCTTGCTCAAGCTTA 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTACATGAGGATTCGCATGGGGAAACCTGATCCTTCCACTGCTGCTCTTGCTCAAGCTTA 240
Query 288 CGCTCCCGGCAAGCCAATCTTTGGGTATGGAGTGTCTAGAGTTATAGAATCTGGGCATCC 347
| |||||||| |||||||| ||||||| |||||| ||||| ||||||||||| |||||
Sbjct 241 CACTCCCGGCCAGCCAATCCAAGGGTATGTAGTGTCCAGAGTGATAGAATCTGGACATCC 300
Query 348 AGATTACAAGAAAGGTGACTTACTCTGGGGGATAGTTGGATGGGAGGAGTA-TAGTGTTA 406
||||||||| ||||| |||||||||||||| ||||||| |||||||||||| | |||||
Sbjct 301 AGATTACAAAAAAGGAGACTTACTCTGGGGTATAGTTGCATGGGAGGAGTACTC-TGTTA 359
Query 407 TTACTCCAATGAC-TCACATGCATTTCAAGATCCAACATACCGATATTCCATTATCTTAC 465
| ||||||| || |||| |||||||||||||||| ||||||||| ||||||||||||||
Sbjct 360 TCACTCCAAC-ACCTCACGTGCATTTCAAGATCCAGCATACCGATGTTCCATTATCTTAC 418
Query 466 TACACTGGACTTCTCGGTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGT 525
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 419 TACACTGGACTTCTCGGTATGCCCGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGT 478
Query 526 TCTCCAAAGGAAGGAGAGACAGTTTATGTGTCAGCTGCATCTGGTGCTGTTGGTCAGCTT 585
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 479 TCTCCAAAGAAAGGAGAGACAGTTTATGTGTCAGCTGCATCTGGTGCGGTTGGTCAGCTT 538
Query 586 GTGGGACAATTTGCTAAGATGATGGGCTGTTATGTTGTTGGAAGCGCCGGAAGTACAGAG 645
||||| ||||||||||||||| ||||||| |||||||||||||||||||| || | |||
Sbjct 539 GTGGGGCAATTTGCTAAGATGTTGGGCTGCTATGTTGTTGGAAGCGCCGGTAGCAAAGAA 598
Query 646 AAGGTTGATCTTCTGAAGACCAAGTTTGGGTTTGATGATGCATTTAACTACAAGGAAGAA 705
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 AAGGTTGATCTCCTCAAGACCAAGTTTGGGTTTGATGATGCATTTAACTACAAGGAAGAA 658
Query 706 CCAGACCTTAGTGCTGCCCTCAAAAGGTGTTTCCCTACA-GGCATTGACATATACTTTGA 764
|| ||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 659 CCTGACCTTACTGCTGCCCTCAAAAGGTGTTTCCCTA-ATGGCATTGACATATACTTTGA 717
Query 765 AAACGTAGGAGGCAAAATGCTAGACGCAGTGCTATTAAACATGAACCCACACGGACGTAT 824
|| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 718 GAATGTAGGAGGCAAAATGCTAGACGCAGTGCTCGTAAACATGAACCCACACGGGCGTAT 777
Query 825 CGCTGTGTGTGGAATGATCTCACAGTACAATCTTGAAAACCAAGAAGGTGTACACAACCT 884
|||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 778 CGCTGTCTGTGGAATGATCTCACAGTACAATCTTGAGAACCAGGAAGGTGTACACAACCT 837
Query 885 ATCCAACATAATCTACAAAAGAATCCGCATTCAAGGCTTTGCAGTGTT-TGATTTCTACG 943
||||||||||||||||||| ||||||||||||||||||||| ||| || ||||||||| |
Sbjct 838 ATCCAACATAATCTACAAACGAATCCGCATTCAAGGCTTTGTAGT-TTCTGATTTCTATG 896
Query 944 AGAAATACTCAAAGTTCTTGGATTTTGTGCTTCCGCACATTAAAGAAGGGAAGATCACGT 1003
| |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||
Sbjct 897 ACAAATACTCAAAGTTCTTGGAGTTTGTGCTTCCGCACATTAGAGAAGGGAAGATAACGT 956
Query 1004 ACGTGGAAGATGTAGCTGATGGGCTTGAGAAAGGTCCTGAAGCTCTTGTGGGACTCTTCC 1063
||||||||||||||||||||||||| ||||||| |||||||||||| || ||||||||||
Sbjct 957 ACGTGGAAGATGTAGCTGATGGGCTCGAGAAAGCTCCTGAAGCTCTCGTTGGACTCTTCC 1016
Query 1064 ATGGTAAGAACGTTGGAAAACAAGTTGTTGTTATTGCTCGTGAGTGAA 1111
|||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1017 ATGGTAAGAATGTTGGGAAACAAGTTGTTGTTATTGCTCGTGAGTGAA 1064
> Ahg941199 jgi|Araly1|941199|scaffold_601743.1
Length=1083
Score = 1511 bits (818), Expect = 0.0
Identities = 1004/1092 (92%), Gaps = 19/1092 (2%)
Strand=Plus/Plus
Query 49 TGAATCGGAGAAG-A--AG-AATTAACGATGACGGCGACGAACAAGCAGGTGGTATTGAA 104
||||||||||||| | || | | |||| |||||||||||||||||||||| ||||||
Sbjct 2 TGAATCGGAGAAGAATTAGCGA-TGACGACGACGGCGACGAACAAGCAGGTGACATTGAA 60
Query 105 AAACTACGTGAGTGGTTTCCCTAAGGAATCCGATTTCGATTTCAAAACCACCACCGTCGA 164
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 AGACTACGTGAGTGGTTTCCCTAAGGAATCCGATTTCGATTTCACCACCACCACCGTCGA 120
Query 165 ATTTAAACTTCCGGGAGGGTCTAACTCAGTTCTGGTGAAGAATCTCTACTTGTCATGCGA 224
| |||| |||||| ||| |||||||| ||||||||||| ||||||||| ||||||||||
Sbjct 121 ACTTAAGGTTCCGGAAGGTTCTAACTCGGTTCTGGTGAAAAATCTCTACCTGTCATGCGA 180
Query 225 TCCTTACATGAGGATTCGCATGGGGAAACCTGATCCTTCCACTGCTGCTCTTGCTCAAGC 284
|||||||||| ||| ||||||| | |||||| | || |||| ||||||||||||||||
Sbjct 181 TCCTTACATGCGGACTCGCATGAGCAAACCTAAACCATCCA---CTGCTCTTGCTCAAGC 237
Query 285 TTACGCTCCCGGCAAGCCAATCTTTGGGTATGGAGTGTCTAGAGTTATAGAATCTGGGCA 344
|||| |||||||| ||||||||| ||||||||||||||||||||| |||||||| || ||
Sbjct 238 TTACACTCCCGGCCAGCCAATCTCTGGGTATGGAGTGTCTAGAGTGATAGAATCCGGACA 297
Query 345 TCCAGATTA-CAAGAAAGGTGACTTACTCTGGGGGATAGTTGGATGGGAGGAGTATAGTG 403
||||||||| ||| ||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct 298 TCCAGATTACCAA-AAAGGCGATTTACTCTGGGGGATAGTTGGATGGGAGGAGTACAGTG 356
Query 404 TTATTACTCCAATGA-CTCACA-TGCATTTCAAGATCCAACATACCGATATTCCATTATC 461
|||| ||||||| | |||| | | |||||||||||||| ||||||||| ||||||||||
Sbjct 357 TTATCACTCCAA-CACCTCA-AGTTCATTTCAAGATCCAGCATACCGATGTTCCATTATC 414
Query 462 TTACTACACTGGACTTCTCGGTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGT 521
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 CTACTATACTGGACTTCTCGGTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGT 474
Query 522 TTGTTCTCCAAAGGAAGGAGAGACAGTTTATGTGTCAGCTGCATCTGGTGCTGTTGGTCA 581
|||||| |||||| |||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 475 TTGTTCCCCAAAGAAAGGAGAGACGGTTTATGTGTCAGCTGCATCTGGTGCGGTTGGTCA 534
Query 582 GCTTGTGGGACAATTTGCTAAGATGATGGGCTGTTATGTTGTTGGAAGCGCCGGAAGTAC 641
||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |
Sbjct 535 GCTTGTGGGACAACTTGCTAAGATGATGGGCTGTTATGTTGTTGGAAGCGCCGGTAGCAA 594
Query 642 AGAGAAGGTTGATCTTCTGAAGACCAAGTTTGGGTTTGATGATGCATTTAACTACAAGGA 701
||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 595 AGAAAAGGTTGATCTCCTCAAGACCAAGTTTGGGTTTGATGATGCATTTAACTACAAGGA 654
Query 702 AGAACCAGACCTTAGTGCTGCCCTCAAAAGGTGTTTCCCTACAGGCATTGACATATACTT 761
||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||
Sbjct 655 AGAACCAGACCTTAGTGCTGCCCTCAAAAGGTGTTTCCCCAAAGGCATAGACATATACTT 714
Query 762 TGAAAACGTAGGAGGCAAAATGCTAGACGCAGTGCTATTAAACATGAACCCACACGGACG 821
||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 715 TGAGAACGTAGGAGGCAAAATGCTAGATGCAGTGCTCTTAAACATGAACCCACACGGACG 774
Query 822 TATCGCTGTGTGTGGAATGATCTCACAGTACAATCTTGAAAACCAAGAAGGTGTACACAA 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 TATCGCTGTGTGTGGAATGATCTCACAGTACAATCTTGAAAACCAAGAAGGTGTACACAA 834
Query 882 CCTATCCAACATAATCTACAAAAGAATCCGCATTCAAGGCTTTGCAGTGTTTGATTTCTA 941
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct 835 CCTATCCAACATAATCTACAAACGAATCCGCATTCAAGGCTTTGCGGTGTTTGATTACTA 894
Query 942 CGAGAAATACTCAAAGTTCTTGGATTTTGTGCTTCCGCACATTAAAGAAGGGAAGATCAC 1001
||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||
Sbjct 895 CGACAAATACTCAAAGTTCTTGGAGTTTGTGCTTCCGTGCATTAAAGAAGGGAAGATAAC 954
Query 1002 GTACGTGGAAGATGTAGCTGATGGGCTTGAGAAAGGTCCTGAAGCTCTTGTGGGACTCTT 1061
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 GTATGTGGAAGATGTAGCTGATGGGCTTGAGAAAGGTCCTGAAGCTCTTGTGGGACTCTT 1014
Query 1062 CCATGGTAAGAACGTTGGAAAACAAGTTGTTGTTATTGCTCGTGAGTGAATATATA-T-A 1119
|||||||||||||||||| ||||||||||| ||| ||||||||||||||| | ||| | |
Sbjct 1015 CCATGGTAAGAACGTTGGGAAACAAGTTGTCGTTGTTGCTCGTGAGTGAAGA-ATACTTA 1073
Query 1120 TCTATGGGAGTA 1131
| | ||||||||
Sbjct 1074 T-T-TGGGAGTA 1083
> Ahg903120 jgi|Araly1|903120|Al_scaffold_0003_248
Length=1056
Score = 859 bits (465), Expect = 0.0
Identities = 850/1033 (82%), Gaps = 37/1033 (4%)
Strand=Plus/Plus
Query 71 CGATGACGGCGACGAACAAGCAGGTGGTATTGAAAAACTACGTGAGTGGTTTCCCTAAGG 130
||| ||||| ||| |||||||||||| || || | | ||||| | |||||||| ||||
Sbjct 20 CGACGACGGTGACCAACAAGCAGGTGATACTGCGAGATTACGTCACCGGTTTCCCCAAGG 79
Query 131 AATCCGATTTCGAT-TTCAAAACC-A--CCACCGTCGAATTTAAA-CTTCCGGGAGGG-T 184
|||| || || || ||| ||| | ||||| ||| ||||||| |||| |||||| |
Sbjct 80 AATCAGACCTC-ATCTTC---ACCGATTCCACCATCG-ATTTAAAGATTCC-GGAGGGAT 133
Query 185 CTAACTCAGTTCTGGTGAAGAATCTCTACTTGTCATGCGATCCTTACATGAGGATTCGCA 244
| || | |||||||||||||||||||||||||| ||||||||||||||| | |||||||
Sbjct 134 CGAAGACGGTTCTGGTGAAGAATCTCTACTTGTCTTGCGATCCTTACATGCGCATTCGCA 193
Query 245 TGGGGAA-ACCTGATCCTTCCACTGCTGCTCTTGCTCAAGCTTACGCTCCCGGCAAGCCA 303
| ||||| || ||||| |||||||| || |||| | ||||| ||||||| |||||
Sbjct 194 T-GGGAATTCCCGATCCCGGTACTGCTGCGCTCGCTCCACCTTACATTCCCGGCGAGCCA 252
Query 304 ATCTT-TGGGTATGGAGTGTCTAGAGTTATAGAATCTGGGCATCCAGATTACAAGAAA-G 361
|| || ||||| | |||||| | ||| ||||| |||||||||||||||||||| ||| |
Sbjct 253 AT-TTATGGGTTTTCAGTGTCAAAAGTGATAGATTCTGGGCATCCAGATTACAA-AAAGG 310
Query 362 GTGACTTACTCTGGGGGA-TAGTTGGATGGGAGGAGTATAGTGTTATTACTCCAATGA-C 419
| |||||||| | ||||| |||||||||||| |||||| ||| |||| ||||| | ||
Sbjct 311 GAGACTTACT-TTGGGGATTAGTTGGATGGGGGGAGTACAGTCTTATAACTCC-A-GATT 367
Query 420 TCACATGCATTTCAAGATCCAACATACCGATATTCCATTATCTTACTACACTGGACTTCT 479
| || |||| |||||||||||| |||||| |||| ||||| |||||||||||||||||
Sbjct 368 TTTCA--CATTACAAGATCCAACACACCGATGTTCCGTTATCCTACTACACTGGACTTCT 425
Query 480 CGGTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCTCCAAAGGAAGG 539
|||||||||||||||||||||||||||||||||||||||| | |||||||| ||| ||||
Sbjct 426 CGGTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAATCTGTTCTCCTAAGAAAGG 485
Query 540 AGAGACAGT-TTATGTGTCAGCTGCATCTGGTGCTGTTGGTCAGCTTGTGGGACAATTTG 598
||| || || || |||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct 486 AGAAACTGTCTTC-GTGTCAGCTGCATCGGGTGCAGTTGGTCAGCTCGTGGGACAATTTG 544
Query 599 CTAAGATGATGGGCTGTTATGTTGTTGGAAGCGCCGGAAGTACA-GAGAAGGTTGATCTT 657
| ||||| |||||||| ||||| |||||||| || || |||| | || ||||||||||||
Sbjct 545 CAAAGATTATGGGCTGCTATGTCGTTGGAAGTGCAGGCAGTA-ATGAAAAGGTTGATCTT 603
Query 658 CTGAAGACCAAGTTTGGGTTTGATGATGCATTTAACTACAAGGAAGA-ACCAGACCTTAG 716
|| |||| |||||| ||||||||||| ||||| || ||||| ||||| | ||||||||
Sbjct 604 CTCAAGAACAAGTTCGGGTTTGATGACGCATTCAATTACAAAGAAGAGAA-AGACCTTAA 662
Query 717 TGCTGCCCTCAAAAGGTGTTTCCCT-ACAGGCATTGACATATACTTTGAAAACGTAGGAG 775
|| |||||| || ||||||||||| | ||| || |||||||||||||| ||||||||||
Sbjct 663 TGTTGCCCTGAAGAGGTGTTTCCCGGA-AGGAATCGACATATACTTTGAGAACGTAGGAG 721
Query 776 GCAAAATGCTAGACGCAGTGCTATTAAACATGAACCCACACGGACGTATCGCTGTGTGTG 835
|||||||||||||||||||||| |||||||||| | |||||| |||||||| || ||||
Sbjct 722 GCAAAATGCTAGACGCAGTGCTCCTAAACATGAAGCTACACGGCCGTATCGCAGTATGTG 781
Query 836 GAATGATCTCACAGTACAATCTTGAAAACCAAGAAGGTGTACACAACCTATCCAACATAA 895
| ||||||||||||||||| ||||| |||| |||||||||||||||||| | ||| | |
Sbjct 782 GTATGATCTCACAGTACAACCTTGAGGACCAGGAAGGTGTACACAACCTAGCAAACGTGA 841
Query 896 TCTACAAAAGAATCCGCATTCAAGGCTTTGCAGTGTTTGATTTCTACGAGAAATACTCAA 955
||||||| | || || |||||||| || | |||| ||||| || || ||| ||| ||
Sbjct 842 TCTACAAGCGGATTCGGATTCAAGGGTTCGTGGTGTCTGATTACTTTGACAAACACTTAA 901
Query 956 AGTTCTTGGATTTTGTGCTTCCGCACATTAA-AGAAGGGAAGATCACGTACGTGGAAGAT 1014
||||| ||||||||||||||||| | || || |||||| ||||| || || || || |||
Sbjct 902 AGTTCCTGGATTTTGTGCTTCCGTATAT-AAGAGAAGGAAAGATAACTTATGTTGAGGAT 960
Query 1015 GTAGCTGATGGGCTTGAGAAAGGTCCTGAAGCTCTTG-TGGGACTCTTCCATGGTAAGAA 1073
||| ||| || |||||||| || ||| |||| ||| | ||||| ||||||||||||||
Sbjct 961 ATAGTTGAAGGACTTGAGAACGGACCTTCAGCT-TTGCTTGGACTGTTCCATGGTAAGAA 1019
Query 1074 CGTTGGAAAACAA 1086
||| || ||||||
Sbjct 1020 CGTCGGCAAACAA 1032
> Ahg472786 jgi|Araly1|472786|fgenesh2_kg.1__2740__AT1G26320.1
Length=1177
Score = 728 bits (394), Expect = 0.0
Identities = 852/1066 (80%), Gaps = 60/1066 (6%)
Strand=Plus/Plus
Query 75 GACGGCGACGAACAAGCAGGTGGTATTGAAAAACTACGTGAGTGGTTTCCCTAAG-GAAT 133
||||| ||| ||||||||| | |||| | |||| |||||||| ||||| ||| ||||
Sbjct 24 GACGGTGACCAACAAGCAGATCATATTCCGAGACTATGTGAGTGGATTCCC-AAGAGAAT 82
Query 134 CCGAT-TTCGATTTCAA-AACCACCACCGTCGAATTTAA-ACTTCCGGGAGGG-TCTAAC 189
| ||| || | | || || || ||| ||| || ||| ||||| |||||| || ||
Sbjct 83 CTGATCTT-AACCT-AACCACAACTACCATCG-ATCTAAGGCTTCC-GGAGGGATC-CAC 137
Query 190 -TCAGTTCTGGTGAAGAATCTCTACTTGTCATGCGATCCTTACATGAGGATTCGCATGGG 248
||||| |||||||||||||| |||||||| ||||||||||||||| | ||| |||| ||
Sbjct 138 GTCAGTGCTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCAT-GG 196
Query 249 GAAA-CCTGAT-CCTTCCACTGCTGCTCTTGCTCAAGCTTACGCTCCCGGCAAGCCAATC 306
|||| || ||| |||| || || | |||| || | | ||| | ||| |||||||
Sbjct 197 GAAAGCCCGATCCCTT-GTCTTCTTCCCTTGTTCCACCGTACAAGACTGGCGTGCCAATC 255
Query 307 TTTGGG-TATGGAGTGTCTAGAGTTATAGAATCTGGGCATCCAGATTACAAGAAA-GGTG 364
||||| | ||||||||||| ||| ||||| || ||||||||||||||||| ||| || |
Sbjct 256 ATTGGGCT-TGGAGTGTCTAAAGTGATAGATTCAGGGCATCCAGATTACAA-AAAGGGAG 313
Query 365 ACTTACTCTGGGGGA-TAGTTGGATGGGAGGAGTATAGTGTTATTACTCCAA-TGACT-C 421
||||||| | ||||| |||||||||||||||||||||||||||||||| || | | | |
Sbjct 314 ACTTACT-TTGGGGACTAGTTGGATGGGAGGAGTATAGTGTTATTACTTTAACTCATTAC 372
Query 422 ACATGCATTTCAAGATCCAACATACCGATATTCCATTATCTTACTACACTGGACTTCTCG 481
|| |||||||| |||||||| |||||| | || ||||||||||||||||||||||| |
Sbjct 373 TCA--CATTTCAAAATCCAACACACCGATGTCCCGTTATCTTACTACACTGGACTTCTTG 430
Query 482 GTATGCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCTCC-AAAGGAAGGA 540
||||||||||||||||||| |||||||| ||||| ||| ||||||| || ||| |||||
Sbjct 431 GTATGCCTGGTATGACTGCTTATGCTGGATTTTACGAAATTTGTTCACCTAAAA-AAGGA 489
Query 541 GAGACAGT-TTATGTGTCAGCTGCATCTGGTGCTGTTGGTCAGCTTGTGGGACAATTTGC 599
||||| || || ||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 490 GAGACTGTCTTC-GTGTCAGCTGCATCTGGCGCGGTTGGTCAGCTCGTGGGACAATTTGC 548
Query 600 TAAGATGATGGGCTGTTATGTTGTTGGAAGCGCCGGAAGTACAGAGAAGGTTGATCTTCT 659
||| ||||||| |||||||| ||||| || ||||| |||| ||| ||||||||||||||
Sbjct 549 AAAGTTGATGGGTTGTTATGTCGTTGGTAGTGCCGGCAGTAAAGAAAAGGTTGATCTTCT 608
Query 660 GAAGACCAAGTTTGGGTTTGATGATGCATTT-AACTACAAGGAAGA-ACCAG-ACCTTAG 716
||||| |||||||||| ||||||||| ||| || ||||||||||| | || || ||||
Sbjct 609 CAAGACTAAGTTTGGGTATGATGATGC-TTTCAATTACAAGGAAGAGA--AGGACTTTAG 665
Query 717 TGCTGCCCTCAAA-AGGTGTTTCCCT-ACAGGCATTGACATATACTTTGAAAACGTAGGA 774
||||||||| || |||| ||| || | ||| || |||||||| ||||| ||||| |||
Sbjct 666 TGCTGCCCT-AAGGAGGTATTTTCCGGA-AGGGATCGACATATATTTTGAGAACGTTGGA 723
Query 775 GGCAAAATGCTAGACGCAGTGCT-ATTAAACATGAACCCACACGGACGTATCGCTGTGTG 833
||||||||| |||| || || || || |||||||| || || ||| |||| || ||
Sbjct 724 GGCAAAATGTTAGATGCCGTACTCAT-AAACATGAGGTTGCATGGTCGTGTCGCAGTATG 782
Query 834 TGGAATGATCTCACAGTACAATCTT-GAAAA-CCAAGAAGGTGTACACAACCTATCCAAC 891
|||||||||||||||||||||| || || | ||| ||||| |||||||||||| || ||
Sbjct 783 TGGAATGATCTCACAGTACAAT-TTAGAGGATCCA-GAAGGCGTACACAACCTA-CCGAC 839
Query 892 -ATAATCTACAAAAGAATCCG-CATTCAAGGCTTTGCAGTGTT-TGATTTCTACGAGAAA 948
|| | ||||| || || | | ||||||| |||| || || |||||||||||| |||
Sbjct 840 CATCCTTTACAAGAGGATACAAC-TTCAAGGGTTTGGGGT-TTGTGATTTCTACGACAAA 897
Query 949 TACTCAAAGTTCTTGGATTTTGTGCTTCCGCACATTAAAGAAGGGAAGATCACG-TACGT 1007
|| |||||||| ||||||||||||||||| |||||| |||||||||||| | | |||||
Sbjct 898 TATTCAAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAA-GATACGT 956
Query 1008 GGAAGATGTAGCTGATGGGCTT-GAGAAAGGTCCTGAAGCTCTTG-TGGGACTCTTCCAT 1065
|| || |||| || || || |||| || ||| |||||| | | |||||||| |
Sbjct 957 TGAGGACATAGCGGAAGGA-TTCGAGAGTGGGCCTTCAGCTCT-GCTAGGACTCTTTGAA 1014
Query 1066 GGTAAGAACGTTGGAAAACAAGT-TGTTGTTATTGCTCGTGAGTGA 1110
||||| ||||| || |||||| | | |||| ||||||||||||||
Sbjct 1015 GGTAAAAACGTCGGGAAACAACTCT-TTGTGGTTGCTCGTGAGTGA 1059
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48301735839
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5