BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G17270.1 Length=2704 Score E Sequences producing significant alignments: (Bits) Value Ahg941232 jgi|Araly1|941232|scaffold_601776.1 4132 0.0 Ahg893637 jgi|Araly1|893637|Al_scaffold_0006_1633 2591 0.0 Ahg915194 jgi|Araly1|915194|Al_scaffold_0009_163 121 3e-26 > Ahg941232 jgi|Araly1|941232|scaffold_601776.1 Length=2725 Score = 4132 bits (2237), Expect = 0.0 Identities = 2557/2709 (94%), Gaps = 31/2709 (1%) Strand=Plus/Plus Query 1 AACCATGGTCGACGGCGAAGTTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCCGGTG 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 22 AACCATGGTCGACGGCGAAATTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCCGGTG 81 Query 61 CACTGTATCCTTTCCACAGA-CAGGTTCTCCTCTCGAATCCCAGCCGCTCGATGGAACTC 119 ||| || || || |||| | ||| | |||||||||||| || | | | Sbjct 82 CACCGTCTCGTTAACACA-ATCAGATCCTCCTCTCGAAT------CG--C-A--G----- 124 Query 120 AATCCGGAACCCATCCACACGACTCTCTTATAACGTCTCTTTTGTCTTCAATCGAGGCTG 179 |||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||| Sbjct 125 --TCCGGAGTTCATCCATACGACTCTCTTATAAGGTCCCTTTTGTCTTCAATCGAGGCTG 182 Query 180 GAGACTATCTTGGAGCTCTATCCTCCGACGCTACTAAGCTAATACTCGGAGATTCCGAGT 239 |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| Sbjct 183 GAGACTATCTTGGAGCTCTAGCCTCCGACGCTACTAGGCTAATAATCGGAGATTCCGAGT 242 Query 240 T-AAACTTGGTTGATACGGTTGATTCCGCCGAGCAAGTTTACTCCGAGCTTCTCGACAAG 298 | || | |||||||||||||||||||| |||| ||||||||||||||||||| ||||| Sbjct 243 TCGAA-GTAGTTGATACGGTTGATTCCGCTGAGCGAGTTTACTCCGAGCTTCTCTACAAG 301 Query 299 GTCGAATCGTTCGTGGTGAACGATTCTTCAGATGAAATCGATAAGGCTCGCCGTGCTGTT 358 ||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||| Sbjct 302 GTCGAATCGTTCGTGTTAAACGAATCTTCAGATGAAATCGGTAAGGCTCGCCGTGCTGTT 361 Query 359 CTGGTGATGTGCTTAGCAATCGCTACTGCTTTGTGGTTCACCCGTTGCAATCTGACTGGG 418 |||||||||||||||||||| || ||||||| |||||||| || |||||| |||| ||| Sbjct 362 CTGGTGATGTGCTTAGCAATTGCGGCTGCTTTTTGGTTCACTCGGTGCAATTTGACCGGG 421 Query 419 TCAACGGAAGGATCAACGAAATGTTCGTTGCCCCTTAG-AGTGTCAGAGAGTAAGGAATT 477 || || ||||||||||| ||||||||||| || || | ||| ||||| ||||| ||| | Sbjct 422 TCGACAGAAGGATCAACAAAATGTTCGTT-ACCGTTTGTAGTATCAGAAAGTAAAGAACT 480 Query 478 AGTTGAGTGGGAGAACTGGGCTAAGATTCAGCTCATGTCTGTCGGTTCTGACTTGCTTGG 537 |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 481 AGTTGAATGGGAGAACTGGGCTAAGATTCAGCTCATGTCTGTTGGTTCTGACTTGCTCGG 540 Query 538 GAAGTTTTCTAATCTCCAGCATTTAGTTTTTGCTAGATTGCTCCTGTTCAAGTTGAAAGA 597 |||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct 541 GAAGTTTTTTAATCTCCAGCATTTAGTTTTTGCTAGAATGCTTCTGTTAAAGTTGAAAGA 600 Query 598 TTTGTTGTTTGAGATAACTTCAACTGAAACTTTTGAAGTAAGGAGTATTTCATGGTGGCT 657 |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 601 TTTGTTGTTTGAGACAACTGCAACTGAAACTTTTGAATTAAGGAGTATTTCATGGTGGCT 660 Query 658 TGTCAGAGTTTTACTGATTCATCAAAGAGTTCTACAAGAGCGATCTTCATCTTTGTTTGA 717 ||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 661 TGTCAGAGTTTTACTTATCCATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGA 720 Query 718 AATGTTGCAAGTTTACATGGCCGAAGCTATAGACCATTTTGGAGAATTGGAAAAAGTAAA 777 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 721 GATGTTGCAAGTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAA 780 Query 778 AAGCTACTGGGGTGCCAATTTGCTAGAAGACGAAGCTTCATCCATCACGTCAACTATCCA 837 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| Sbjct 781 AAGCTACTGGGGTGCCAAGTTGCTAGTAGACGAAGCTTCATCCATCACGTCAACCATCCA 840 Query 838 TCTGGAAGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTTCACGGTTGCAGCT 897 |||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 841 TCTGGAGGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTGCTCGGTTGCAGCT 900 Query 898 TGAATCTGCTAAAGCAGCAGCAAGCCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCG 957 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 901 TGAATCTGCTAAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCG 960 Query 958 TACTATTCACCAAGTAGATCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATC 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 TACTATTCACCAAGTAGATCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATC 1020 Query 1018 CAATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGG 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 CAATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGG 1080 Query 1078 AGGTGAAGCACCTGAAGTATATATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGG 1137 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1081 AGGTGAAGCACCTGAAGTATATATGACTCCCAAACTAGTAAACAACGAGAGTGAAGCTGG 1140 Query 1138 CAAAGATTCTGTGCCCTTGAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCT 1197 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GAAAGATTCTGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCT 1200 Query 1198 AATTGAAAGGGGTAGTCGGCACGATGAGATGCAAAGATGGGATATGGCTCCATATATTGA 1257 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 AATTGAAAGGGGTAGTAGGCACGATGAGATGCAAAGATGGGATATGGCTCCATATATTGA 1260 Query 1258 GGCAATAGATTCTCAAAAGTCAACATATTTTGTTCTACGGTGTTTTTGTGACTTACTACG 1317 |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1261 GGCAATTGATTCTCAAAAGTCAACACATTTTGTTCTACGGTGTTTTTGTGACTTATTACG 1320 Query 1318 TGTTCGATGGGAATCAACTAGAGGTCGTACAAAGGGACGCGCCCTAGAGATGATGGATAA 1377 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1321 TGTTCGATGGGAATCAACTAGAGGTCGTACAAAGGGACGCGCCCTGGAGATGATGGATAA 1380 Query 1378 ATTGGTTGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACAGGATCCCTTTATGCTA 1437 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 1381 ATTGGTTGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACCGTATCCCTTTATGCTA 1440 Query 1438 TGCTGTCCATCTTCCTACTATTCCTGCTCTGAGAAAGGAATACGGTGAGCTTCTGGTGAG 1497 ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1441 TGCAGTCCATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAG 1500 Query 1498 TTGCGGTTTGGTTGGGGAAGCAATCACCATATTTGAGAGCCTGGAATTGTGGGATAATCT 1557 ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct 1501 TTGCGGTTTGGTTGGGGAAGCAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATCT 1560 Query 1558 AATCTACTGCTACTGCCTTCTGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCACG 1617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 AATCTACTGCTACTGCCTTCTGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCACG 1620 Query 1618 GCTTCTTGAACGGCCAAATGACCCAAGATTATGGTGTTCACTTGGTGATGTTACTATAAA 1677 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 1621 GCTTGATGAACGGCCAAATGACCCAAGATTATGGTGTTCACTGGGTGATGTTACTATTAA 1680 Query 1678 TGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAAGCG 1737 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1681 TGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAAGCG 1740 Query 1738 CGCTCTTGCTCGCAGCGCATACAATCGCGGTGATTTTGAGAAGTCAAAGATGCTGTGGGA 1797 |||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct 1741 GGCTCTTGCACGCAGCGCCTACAATCGGGGTGATTTTGAGAAGTCGAAGATGCTGTGGGA 1800 Query 1798 GGCTGCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGCTGC 1857 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1801 GGCTGCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGCTGC 1860 Query 1858 GTTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACTTGA 1917 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1861 ATTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACTTGA 1920 Query 1918 TCCCGACAATGGGGAGGCTTGGAACAACATTGCTTGTCTGCATATGATAAAGAAAAAGAG 1977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1921 TCCCGACAATGGGGAGGCTTGGAACAACATTGCTTGTCTGCATATGATAAAGAAAAAGAG 1980 Query 1978 CAAAGAATCATTCATTGCGTTCAAAGAAGCACTTAAATTCAAGCGAGATAGCTGGCAGAT 2037 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1981 CAAAGAATCATTCATTGCGTTCAAAGAAGCACTTAAATTCAAGCGAGATAGCTGGCAGAT 2040 Query 2038 GTGGGAAAATTTCAGTCATGTCGCTATGGATGTGGGAAATATTGATCAGGCCTTTGAAGC 2097 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2041 GTGGGAGAATTTCAGTCATGTAGCTATGGATGTGGGAAATATTGATCAGGCCTTTGAAGC 2100 Query 2098 TATACAACAGATACTGAAAATGAGCAAAAACAAGAGGGTTGATGTTGTTTTATTGGACCG 2157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2101 TATACAACAGATACTGAAAATGAGCAAAAACAAGAGGGTTGATGTTGTTTTATTGGACCG 2160 Query 2158 TATAATGACAGAGTTAGAAAAGAGGAATTCAGCATGTAAGTCATCATCTTCATCGACTGA 2217 ||||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||| Sbjct 2161 TATAATGACAGAGTTAGAAAATAGGAATTCAGCATGTAAGTCATC-T-T-CATCGATTGA 2217 Query 2218 AACCGAAGCTTCTTCAGATGAGTCAACAGAAACAAAACCATGTACTGCAACACCAGCTGA 2277 ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 2218 AACCGAAACTTCTTCAGATGAATCAGCAGAAACAAAACCATGTACTGCAACACCAGCTGA 2277 Query 2278 AACTCAACGCCAGCTAGAATTACTTGGGAAAGTTATTCAGCAGATTGTCAAAACAGAAAG 2337 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct 2278 AACTCAACGCCAGCTAGAGTTGCTTGGGAAAATTATTCAGCAGATTGTCAAAACAGAAAG 2337 Query 2338 TACAGCAGAAATCTGGGGGTTATATGCAAGATGGAGTAGAATCAAAGGAGATCTTACGGT 2397 |||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 2338 TACATCTGAAATCTGGGGATTATATGCAAGATGGAGTAGAATCAAAGGAGATCTTATGGT 2397 Query 2398 ATGCAGCGAGGCACTGTTAAAGCAAGTGCGATCATATCAGGGATCAGAAGTGTGGAAAGA 2457 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2398 ATGCAGCGAGGCACTGTTAAAGCAAGTGCGATCATATCAGGGATCAGAAGTTTGGAAAGA 2457 Query 2458 CAAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTATATGGA 2517 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 2458 CAAAGAGCGTTTCAAGAATTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTACATGGA 2517 Query 2518 GATCTCAGCT-TCCATAGGAAGCAAACGAGAACTGTTTACTGCTGAGATGCATTTGAAGA 2576 |||||||| | |||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2518 GATCTCAG-TGTCCACAGGAAGCAAACGAGAACTGTTTAGTGCTGAGATGCATTTGAAGA 2576 Query 2577 ACACAATCAAACAAGCTACAGTGAGCTTCTTGGACAGTGAAGAATTGAAGGAACTTGAAA 2636 |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 2577 ACACAATCAAACAAGCTACAATGAGCTTCTTGGACACTGAAGAATTGAAGGAACTTGAAA 2636 Query 2637 GTTGCCTTGAGGAGGTAAGAAATGTCATGCAGAAAAGTGAAGAAGAGTA-TAGAGATACA 2695 |||||||||||||||| |||||||| |||||||| ||||| |||||| | |||| ||||| Sbjct 2637 GTTGCCTTGAGGAGGTGAGAAATGTAATGCAGAAGAGTGATGAAGAG-ACTAGAAATACA 2695 Query 2696 AAAACATGA 2704 |||| |||| Sbjct 2696 AAAATATGA 2704 > Ahg893637 jgi|Araly1|893637|Al_scaffold_0006_1633 Length=2616 Score = 2591 bits (1403), Expect = 0.0 Identities = 1785/1962 (91%), Gaps = 56/1962 (3%) Strand=Plus/Plus Query 5 ATGGTCGACGGCGAAGTTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCCGGTGCACT 64 ||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| Sbjct 1 ATGGTTGACGGCGAAGTTGAAACCCTTCGAGGTTATGAGCTCCGTCTCCTCCGGTGCACC 60 Query 65 GTATCCTTT-CCACAGA-CAGGTTCTCCTCTCGAATCCCAGCCGCTCGATGGAACTCAAT 122 || | |||| |||| | ||| | | |||||||||||||| | || || | | | Sbjct 61 GTCT-CTTTAACACA-ACCAGATCCCCCTCTCGAATCCCA---GTTC---GG-AGT---T 108 Query 123 CCGGAACCCATCCACACGACTCTCTTATAACGTCTCTTTTGTCTTCAATCGAGGCTGGAG 182 |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 109 --------CATCCACACGACTCTCTTATAACGTCCCTTTTGTCTTCAATCGAGGCTGGAA 160 Query 183 ACTATCTTGGAGCTCTATCCTCCGACGCTACTAAGCTAATACTCGGAGATTCCGAGTTAA 242 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 161 ACTATCTTGGAGCCCTAGCCTCCGACGCTACTAAGCTAATACTCGGCGATTCCGAGTTCG 220 Query 243 ACTTGGTTGA-TACGGTTGATTCCGCCGAGCAAGTTTACTCCGAGCTTCTCGACAAGGTC 301 || |||| || | ||||||||||||| || | |||||| ||| ||||||||||||||||| Sbjct 221 ACCTGGTCGACT-CGGTTGATTCCGCTGAACGAGTTTATTCCCAGCTTCTCGACAAGGTC 279 Query 302 GAATCGTTCGTGGTGAACGATTCTTCAGATGAAATCGATAAGGCTCGCCGTGCTGTTCTG 361 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 280 GAATCGTTCGTGGTGAACGATTCGTCAGATGAAATCGACAAGGCTCGCCGTGCTGTTCTG 339 Query 362 GTGATGTGCTTAGCAATCGCTACTGCTTTGTGGTTCACCCGTTGCAATCTGACTGGGTCA 421 |||||||||||||||||||| |||||||||||||||| || |||||| |||| ||||| Sbjct 340 GTGATGTGCTTAGCAATCGCGGCTGCTTTGTGGTTCACTCGGTGCAATTTGACCGGGTCG 399 Query 422 ACGGAAGGATCAACGAAATGTTCGTTGCCCCTTAGAGTGTCAGAGAGTAAGGAATTAGTT 481 |||||||||||||| ||| ||| || || || | ||| || |||||| Sbjct 400 ACGGAAGGATCAAC-AAA--TTC--TG-----TACCGT-T-------TAAAGATTTAGTT 441 Query 482 GAGTGGGAGAACTGGGCTAAGATTCAGCTCATGTCTGTC-GGTTCTGACTTGCTTGGGAA 540 || |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct 442 GAATGGGAGAACTGGGCTAAGATTCAGCTCATGTCTG-CAGGTTCTGACTTGCTCGGGAA 500 Query 541 GTTTTCTAATCTCCAGCATTTAGTTTTTGCTAGATTGCTCCTGTTCAAGTTGAAAGATTT 600 ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 501 GTTTTCTAATCTCCAACATTTAGTTTTTGCTAGATTGCTTCTGTTAAAGTTGAAAGATTT 560 Query 601 GTTGTTTGAGATAACTTCAACTGAAACTTTTGAAGTAAGGAGTATTTCATGGTGGCTTGT 660 ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 561 GTTGTTTGAGACAACTGCAACTGAAACTTTTGAATTAAGGAGTATTTCATGGTGGCTTGT 620 Query 661 CAGAGTTTTACTGATTCATCAAAGAGTTCTACAAGAGCGATCTTCATCTTTGTTTGAAAT 720 |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| || Sbjct 621 CAGAGTTTTACTTATCCATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGAGAT 680 Query 721 GTTGCAAGTTTACATGGCCGAAGCTATAGACCATTTTGGAGAATTGGAAAAAGTAAAAAG 780 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 681 GTTGCAAGTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAAAAG 740 Query 781 CTACTGGGGTGCCAATTTGCTAGAAGACGAAGCTTCATCCATCACGTCAACTATCCATCT 840 ||||||||| |||| || ||||||||||||||||||||||| |||||||| |||||||| Sbjct 741 TTACTGGGGTTCCAAGTTACTAGAAGACGAAGCTTCATCCATTACGTCAACCATCCATCT 800 Query 841 GGAAGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTTCACGGTTGCAGCTTGA 900 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 801 GGAAGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTTCTCGGTTGCAGCTTGA 860 Query 901 ATCTGCTAAAGCAGCAGCAAGCCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTAC 960 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 861 ATCTGCTAAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTAC 920 Query 961 TATTCACCAAGTAGAT-CCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCA 1019 |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| Sbjct 921 TATTCACCAAGTAG-TACCAAAGGCGCAGATGGTATTGGTAGCCAATACTAGCTCATCCA 979 Query 1020 ATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGGAG 1079 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 980 ATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAG 1039 Query 1080 GTGAAGCACCTGAAGTATATATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGGCA 1139 ||||| ||||| |||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 1040 GTGAAACACCTCAAGTATTTATGACTCCCAAACTAGTGAACAACGAGAGTGAATCTGGCA 1099 Query 1140 AAGATTCTGTGCCCTTGAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAA 1199 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100 AAGATTCTGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAA 1159 Query 1200 TTGAAAGGGGTAGTCGGCACGATG-AGATGCAAAGATGGGATATGGCTCCATATATTGAG 1258 |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 1160 TTGAAAGGGGTAGTCGGCACGATGCA-ATGCAAAGTTGGGATATGGCTCCATATATTGAG 1218 Query 1259 GCAATAGATTCTCAAAAGTCAACATATTTTGTTCTACGGTGTTTTTGTGACTTACTACGT 1318 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 1219 GCAATTGATTCTCAAAAGTCAACATATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGT 1278 Query 1319 GTTCGATGGGAATCAACTAGAGGTCGTACAAAGGGA-CGCGCCCTAGAGATGATGGATAA 1377 ||||||||||||||| || || |||||||| |||| ||||||| || ||||||||||| Sbjct 1279 GTTCGATGGGAATCATCTCGATATCGTACAA-GGGAACGCGCCCGGGATATGATGGATAA 1337 Query 1378 ATTGGTTGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACAGGATCCCTTTATGCTA 1437 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 1338 GCTGGTTGGAGCTATTAGCAAGAGCGATCCTGGAGTATCAAATAGGATCCCTTTATGCTA 1397 Query 1438 TGCTGTCCATCTTCCTACTATTCCTGCTCTGAGAAAGGAATACGGTGAGCTTCTGGTGAG 1497 ||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1398 TGCAGTGTATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAG 1457 Query 1498 TTGCGGTT-TGGTTGGGGAAGCAATCACCATATTTGAGAGCCTGGAATTGTGGGATAATC 1556 |||||||| || | |||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 1458 TTGCGGTTATGCT-GGGGAAGCAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATC 1516 Query 1557 TAATCTACTGCTACTGCCTTC-TGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCA 1615 |||| |||||||||||| | | || |||||||||||| |||||| |||||||||| ||| Sbjct 1517 TAATTTACTGCTACTGC-TCCATGCAAAAGAAATCAGCGGCTGTACATCTCATCAAAGCA 1575 Query 1616 CGGCTTCTTGAACGGCCAAATGACCCAAGATTATGGTGTTCACTTGG-TGATGTTACTAT 1674 ||||||| |||||| ||||||||||||||||||| ||||||| |||| ||||||||| || Sbjct 1576 CGGCTTCATGAACGCCCAAATGACCCAAGATTATTGTGTTCA-TTGGGTGATGTTACGAT 1634 Query 1675 AAATGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAA 1734 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1635 TAACGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGACAAGTCAGTTCGTGCTAA 1694 Query 1735 GCGCGCTCTTGCTCGCAGCGCATACAATCGCGGTGATTTTGAGAAGTCAAAGATGCTGTG 1794 ||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct 1695 GCGGGCTCTTGCTCGCAGCGCCTACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTG 1754 Query 1795 GGAGGCTGCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGC 1854 ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||| Sbjct 1755 GGAGGCTGCAATGTCCTTGAATTCTCTGTATCCAGATGGTTGGTTTGCTCTTGGTACTGC 1814 Query 1855 TGCGTTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACT 1914 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1815 TGCGTTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTCGCTGTTCATCT 1874 Query 1915 TGATCCCGACAATGGGGAGGCTTGGAACAACATTGCTTGTCT 1956 |||||| |||||| || ||||||||||||||||||||| ||| Sbjct 1875 TGATCCTGACAATTGGCAGGCTTGGAACAACATTGCTTCTCT 1916 Score = 326 bits (176), Expect = 7e-88 Identities = 241/272 (89%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 2435 CAGGGATCAGAAGTGTGGAAAGACAAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTG 2494 |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct 2335 CAGGGATCAGAAGTGTGGAAAGACGACGACCGTTTCAAGAAGTTTGCAAGAGCATCATTG 2394 Query 2495 GAACTTTGTAGAGTGTATATGGAGATCTCAGCT-TCCATAGGAAGCAAACGAGAACTGTT 2553 ||||||||||||||||| |||||||| |||| | || | |||||||| |||||||||||| Sbjct 2395 GAACTTTGTAGAGTGTACATGGAGATGTCAG-TGTCGACAGGAAGCAGACGAGAACTGTT 2453 Query 2554 TACTGCTGAGATGCATTTGAAGAACACAATCAAACAAGCTACAGTGAGCTTCTTGGACAG 2613 | |||||||||||||||||||||||||||||||||||||| || ||||||| ||| | Sbjct 2454 GAGTGCTGAGATGCATTTGAAGAACACAATCAAACAAGCTAGAGAGAGCTTCCCGGATAC 2513 Query 2614 TGAAGAATTGAAGGAACTTGAAAGTTGCCTTGAGGAGGTAAGAAATGTCATGCAGAAAA- 2672 || ||||||||| || ||||||||||||||||||||||| |||||||| |||||||| | Sbjct 2514 TGCAGAATTGAAAGAGCTTGAAAGTTGCCTTGAGGAGGTGAGAAATGTTATGCAGAAGAC 2573 Query 2673 GTGAAGAAGAGTATA-GAGATACAAAAACATG 2703 | ||||| || || | || ||||||||||||| Sbjct 2574 G-GAAGA-GAATAGAAGAAATACAAAAACATG 2603 Score = 278 bits (150), Expect = 2e-73 Identities = 174/186 (94%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 2021 CGAGATAGCTGGCAGATGTGGGAAAATTTCAGTCATGTCGCTATGGATGTGGGAAATATT 2080 ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||| | Sbjct 1918 CGAGATAGCTGGCAGATATGGGAGAATTTCAGTCATGTAGCTATGGATGTGGGGAATACT 1977 Query 2081 GATCAGGCCTTTGAAGCTATACAACAGATACTGAAAATGAGCAAAAACAAGAGGGTTGAT 2140 ||| |||| |||||||||||||||||| |||||||| ||||||||||||||| | ||||| Sbjct 1978 GATAAGGCTTTTGAAGCTATACAACAGGTACTGAAATTGAGCAAAAACAAGAAGATTGAT 2037 Query 2141 GTTGTTTTATTGGACCGTATAATGACAGAGTTAGAAAAGAGGAATTCAGCATGTAAGTCA 2200 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2038 GTTGTTTTATTGGACCGTATAATGACAGAGTTAGAAAATAGGAATTCAGCATGTAAGTCA 2097 Query 2201 TCATCT 2206 |||||| Sbjct 2098 TCATCT 2103 Score = 135 bits (73), Expect = 1e-30 Identities = 108/124 (87%), Gaps = 6/124 (5%) Strand=Plus/Plus Query 2200 ATCATCTTCATCGACTGAAACCGAAGCTTCTTCAGATG-AGTCAACAGAAACAAAACCA- 2257 |||||||| ||||| ||||| ||||||||||||||||| | | || ||||||||| || Sbjct 2217 ATCATCTTTATCGATTGAAATCGAAGCTTCTTCAGATGAACT-GACGGAAACAAAA-CAG 2274 Query 2258 TGTACTGCAACACCAGCTGAAACTCAACGCCAGCTAGAATTACTTGGG-AAAGTTATTCA 2316 ||| |||||||||||||||||||||||||||| ||||| || |||||| ||| ||||||| Sbjct 2275 TGTGCTGCAACACCAGCTGAAACTCAACGCCACCTAGAGTTGCTTGGGGAAA-TTATTCA 2333 Query 2317 GCAG 2320 |||| Sbjct 2334 GCAG 2337 > Ahg915194 jgi|Araly1|915194|Al_scaffold_0009_163 Length=1140 Score = 121 bits (65), Expect = 3e-26 Identities = 85/94 (90%), Gaps = 4/94 (4%) Strand=Plus/Plus Query 459 TGT-CAGAGAGTA-AGGAATTAGTTGAGTGGGAGAACTGGGCTAAGATTCAGCTCATGTC 516 ||| ||||||| | | ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 255 TGTACAGAGAGAATATGAATTAGCTGAATGGGAGAACTGGGCTAAGATTCAGCTCATGTC 314 Query 517 TGTCGGTTCTGACTTGCTT-GGGAAGTTTTCTAA 549 ||| |||||||||||| || |||||||||||||| Sbjct 315 TGTAGGTTCTGACTTG-TTCGGGAAGTTTTCTAA 347 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 102005676110 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5