BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G20550.1
Length=1242
Score E
Sequences producing significant alignments: (Bits) Value
Ahg488949 jgi|Araly1|488949|fgenesh2_kg.6__2083__AT5G20400.1 1358 0.0
Ahg474077 jgi|Araly1|474077|fgenesh2_kg.1__4031__AT1G49390.1 1129 0.0
Ahg917070 jgi|Araly1|917070|Al_scaffold_0008_1821 640 0.0
Ahg941606 jgi|Araly1|941606|scaffold_602150.1 433 2e-120
> Ahg488949 jgi|Araly1|488949|fgenesh2_kg.6__2083__AT5G20400.1
Length=1098
Score = 1358 bits (735), Expect = 0.0
Identities = 957/1063 (90%), Gaps = 19/1063 (2%)
Strand=Plus/Plus
Query 37 AACAATGGAGAAGCCAAAGTTCAAGACTGTCCAAGAGGTGGTTGCAGCAGGCGAAGGAAT 96
||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 1 AACCATGGAAAAGCCAAAGTTCAAGACTGTCCAAGAGGTGGTTGCAGCCGGCGAAGGACT 60
Query 97 ACCGGAGAGATACCTCCAAC-CA-CCAGCCGTCGACGAC-AATGGTCAACATCTTAACGC 153
||||||||||| |||| || || ||| ||| |||| | || | ||||| |||||||||
Sbjct 61 GCCGGAGAGATATCTCC-ACGCACCCA-CCGGAGACGGCGAA-GTTCAACCTCTTAACGC 117
Query 154 TGCCGTGCCGGTGATGGATATTCCGGCCATCGATTTGAGTCTTCTCCTCTCTCCTTCTGA 213
||| ||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||
Sbjct 118 TGCGGTGCCGGAGATGGATATTCCGGCCATCGATCTCAGTCTTCTCCTCTCTTCTTCTGA 177
Query 214 TGACGGTCGAGAAGAGTTGAGTAAACTTCACTCGGCACTCTCTACATGGGGAGTTGTTCA 273
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 178 AGACGGTCGAGAAGAGTTGAGTAAACTTCACTCGGCACTCTCTACATGGGGCGTTGTTCA 237
Query 274 GGTGATAAATCATGGAATTACAAAAGCGTTGCTCGACAAGATTTACAAGCTAACCAAGGA 333
|||||| ||||||||||||||| ||||||| || ||||| ||||||||||||||||||||
Sbjct 238 GGTGATGAATCATGGAATTACAGAAGCGTTTCTTGACAAAATTTACAAGCTAACCAAGGA 297
Query 334 GTTCTGTGCACTTCCGTCCGAAGAGAAACAAAAGTACGCGAGAGAGATTGGTAGTATCCA 393
||||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 298 GTTCTTTGCGCTTCCGACCGAAGAGAAACAGAAGTGCGCGAGAGAGATTGGTAGTATCCA 357
Query 394 AGGATATGGTAACGATATGATTCTGTGGGATGATCAAGTTCTTGATTGGATCGACCGTTT 453
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 358 AGGATATGGAAACGACATGATTCTTTGGGATGATCAAGTTCTTGATTGGATCGACCGTTT 417
Query 454 GTATATCACTACTTACCCTGAAGATCAGAGACAACTTAAGTTCTGGCCTGATGTCCCTGT 513
|||||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct 418 GTATATTACTACATACCCTGAAGATCAGAGACAACTTAAGTTCTGGCCTCAAGTCCCACT 477
Query 514 CGGATTCAGGGAAACTTTACATGAATACACAATGAAGCAACATCTAGTGTTTAATCAAGT 573
||||||||||||||||||||||||||||||||||||||||| ||||| || | || |
Sbjct 478 CGGATTCAGGGAAACTTTACATGAATACACAATGAAGCAACGGATAGTGATTGAGAAATT 537
Query 574 CTTTAAAGCGATGGCTATATCGTTGGAATTGGAAGAGAATTGCTTTCTAGACATGTGTGG 633
||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||||| |||
Sbjct 538 CTTTAAAGCCATGGCTAGATCTTTGGAATTGGAAGAGAATAGTTTTCTAGACATGTATGG 597
Query 634 AGAAAATGCTACGATGGATACAAGATTCAACATGTATCCTCCATGTCCGAGGCCGGACAA 693
|||| |||||| |||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 598 GGAAAGTGCTACTATGGATACAAGACTCAACATGTATCCTCCATGTCCGAAGCCGGACAA 657
Query 694 GGTTATTGGCGTTAGACCGCACGCTGATAAG-TCGGCTTTCACTCTTCTCTTGCCTGACA 752
||||||||| |||| ||||||||||||| | |||||||||||||||||||| || ||||
Sbjct 658 GGTTATTGGGGTTAAACCGCACGCTGAT-GGCTCGGCTTTCACTCTTCTCTTACCCGACA 716
Query 753 AAAATGTCGAAGGGCTTCAGTTCCTTAAAGATGGGAAGTGGTATAAAGCTCC-AGTTGTC 811
|| |||| ||||||||||||||||| ||||||||||| |||||||||||||| | | |||
Sbjct 717 AAGATGTGGAAGGGCTTCAGTTCCTCAAAGATGGGAAATGGTATAAAGCTCCTA-TAGTC 775
Query 812 GCTTCAGATACAATTCTGATCAATGTTGGAGATCAGATGGAGATAATGAGCAATGGGATA 871
| | ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 776 -C--CTGATACAATTTTGATCAATGTTGGTGATCAAATGGAGATAATGAGCAATGGGATA 832
Query 872 TACAAGAGCCCGGTTCATAGAGTGGTGACTAATACAGAAAAAGAAAGGATATCTGTGGCA 931
|||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||
Sbjct 833 TACAAGAGCCCGGTTCATAGAGTGGTGACTAACAGAGAAAAGGAAAGGATATCTGTGGCA 892
Query 932 ACGTTTTGCATTCCAGGTGCAGACAAAGAGATTCAGCCTGTTGATGGGCTTGTGTCTGAG 991
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 893 ACGTTTTGCATTCCAGGTGCAGACAAAGAGATTCAGCCTGTGGATGAGCTTGTGTCTGAG 952
Query 992 GCAAGACCAAGATTGTATAAGCCAGTAAAAAACTATGTGGACCTCTTAAA-CAAGTACTA 1050
|||||||||||||||||||| |||| || || |||||||| |||| | |||||||||
Sbjct 953 GCAAGACCAAGATTGTATAAAACAGTTAAGAAGTATGTGGAGCTCT-ACTTCAAGTACTA 1011
Query 1051 T-ATACAGGGTCAAAGACCAATTGCAGC-GTCATTGATCTGAT 1091
| | |||||||| | |||| |||| ||| | ||||||||||||
Sbjct 1012 TCA-ACAGGGTCGACGACCTATTGAAGCTG-CATTGATCTGAT 1052
> Ahg474077 jgi|Araly1|474077|fgenesh2_kg.1__4031__AT1G49390.1
Length=1048
Score = 1129 bits (611), Expect = 0.0
Identities = 915/1060 (86%), Gaps = 27/1060 (3%)
Strand=Plus/Plus
Query 41 ATGGAGAAGCCAAAGTTCAAGACTGTCCAAGAGGTGGTTGCAGCAGGCGAAGGAATACCG 100
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 1 ATGGAGAAGCCAAAGTTCAAGACTGTCCAAGAGGTGGTTGCAGCCGGCGAAGGACTACCG 60
Query 101 GAGAGATACCTCCA--A-CCA-CCAGCCGTCGACGACAATGGTCAACATCTTAACGCTGC 156
|||||||| ||||| | ||| ||||| | | ||| || | ||||| |||||||| | |
Sbjct 61 GAGAGATATCTCCATGAGCCAACCAGC-GAAGGCGA-AA-G-TCAACCTCTTAACGGTTC 116
Query 157 CGTGCCGGTGATGGATATTCCGGCCATCGATTTGAGTCTTCTCCTCTCTCCTTCTGATGA 216
||||||| |||||||||||| ||||||||| | ||||||||| ||||| ||||||| ||
Sbjct 117 GGTGCCGGAGATGGATATTCCAGCCATCGATCTCAGTCTTCTCTTCTCTTCTTCTGAAGA 176
Query 217 CGGTCGAGAAGAGTTGA-GTAAACTTCACTCGGCACTCTCTACATGGGGAGTTGTTCAGG 275
|||||||||||||||| | ||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 177 GGGTCGAGAAGAGTTGAAG-AAACTTCACTCAGCACTATCTACATGGGGCGTTGTTCAGG 235
Query 276 TGATAAATCATGGAATTACAAAAGCGTTGCTCGACAAGATTTACAAGCTAACCAAGGAGT 335
|||| |||||||||||||| ||| ||| || |||||||||||||||||||||||| |||
Sbjct 236 TGATGAATCATGGAATTACTGAAGAGTTTCTTGACAAGATTTACAAGCTAACCAAGCAGT 295
Query 336 TCTGTGCACTTCCGTCCGAAGAGAAACAAAAGTACGCGAGAGAGATTGGTAGTATCCAAG 395
||| ||| ||||| ||||||||||||| |||| ||||||||||| |||| ||||||||
Sbjct 296 TCTTTGCGCTTCCAACCGAAGAGAAACACAAGTGCGCGAGAGAGACAGGTAATATCCAAG 355
Query 396 GATATGGTAACGATATGATTCTGTGGGATGATCAAGTTCTTGATTGGATCGACCGTTTGT 455
||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 356 GATATGGAAACGATATGATTCTGTCCGATAATCAAGTTCTTGATTGGATCGACCGTTTGT 415
Query 456 ATATCACTACTTACCCTGAAGATCAGAGACAACTTAAGTTCTGGCCTGATGTCCCTGTCG 515
| |||||||||||||||||||| || | |||||| ||||||||||| | ||||| ||||
Sbjct 416 TTCTCACTACTTACCCTGAAGATAAGCGTCAACTTCAGTTCTGGCCTCAAGTCCCGGTCG 475
Query 516 GATTCAGGGAAACTTTACATGAATACACAATGAAGCAACATCTAGTGTTTAATCAAGTCT 575
| ||||| |||||||||||||||||||| |||||||||| ||||| || | || |||
Sbjct 476 GGTTCAGTGAAACTTTACATGAATACACGATGAAGCAACGGGTAGTGATTGAGAAATTCT 535
Query 576 TTAAAGCGATGGCTATATCGTTGGAATTGGAAGAGAATTGCTTTCTAGACATGTGTGGAG 635
|||| || ||||||| ||| |||||||||||||||||||| |||||||| |||| |||||
Sbjct 536 TTAAGGCTATGGCTAGATCATTGGAATTGGAAGAGAATTGTTTTCTAGAGATGTATGGAG 595
Query 636 AAAATGCTACGATGGATACAAGATTCAACATGTATCCTCCATGTCCGAGGCCGGACAAGG 695
||||||||| ||| || ||||||||||| | | |||||||||||| ||||| |||||||
Sbjct 596 AAAATGCTATAATGAATTCAAGATTCAACTTCTTTCCTCCATGTCCAAGGCCAGACAAGG 655
Query 696 TTATTGGCG-TTAGACCGCACGCTGATAAG-TCGGCTTTCACTCTTCTCTTGCCTGACAA 753
||||||| | ||| ||||||||||||| | |||||| ||||||||||||| || |||||
Sbjct 656 TTATTGG-GATTAAACCGCACGCTGATG-GCTCGGCTATCACTCTTCTCTTACCCGACAA 713
Query 754 AAATGTCGAAGGGCTTCAGTTCCTTAAAGATGGGAAGTGGTATAAAGCTCCAGTTGTCGC 813
| |||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||| |
Sbjct 714 AGATGTCGAAGGACTTCAGTTCCTCAAAGATGGGAAGTGGTATAAAGCTCCAATAGTCCC 773
Query 814 TTCAGATACAATTCTGATCAATGTTGGAGATCAGATGGAGATAATGAGCAATGGGATATA 873
| ||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||
Sbjct 774 T---GATACAATTCTTATCAATCTAGGAGATCAGATGGAGATAATGAGTAATGGGATATA 830
Query 874 CAAGAGCCCGGTTCATAGAGTGGTGACTAATACAGAAAAAGAAAGGATATCTGTGGCAAC 933
|||||| |||||||||||||||||||| || | |||||| |||||||| |||||||||||
Sbjct 831 CAAGAGTCCGGTTCATAGAGTGGTGACGAACAGAGAAAAGGAAAGGATCTCTGTGGCAAC 890
Query 934 GTTTTGCATTCCAGGTGC-AGACAAAGAGATTCAGCCTGTTGA-TGGGCTTGTGTCTGAG 991
|||||| |||| || || |||||||||||||||||||| || ||||||||||||||||
Sbjct 891 GTTTTGTGTTCCGGG-GCCAGACAAAGAGATTCAGCCTGC-GAATGGGCTTGTGTCTGAG 948
Query 992 GCAAGACCAAGATTGTATAAGCCAGTAAAAAACTATGTGGACCTCTTAA-ACAAGTACTA 1050
|||||||||||||||||||| || | | || |||| ||| ||| | ||||||||||
Sbjct 949 GCAAGACCAAGATTGTATAAAACAATTACCAAGTATGCGGAGCTCC-ACTACAAGTACTA 1007
Query 1051 T-ATACAGGGTCAAAGACCAATTGCAGC-GTCATTGATCT 1088
| | ||| |||| |||| | |||| ||| | |||||||||
Sbjct 1008 TCA-ACAAGGTCGAAGAACTATTGAAGCTG-CATTGATCT 1045
> Ahg917070 jgi|Araly1|917070|Al_scaffold_0008_1821
Length=993
Score = 640 bits (346), Expect = 0.0
Identities = 566/669 (85%), Gaps = 27/669 (4%)
Strand=Plus/Plus
Query 41 ATGGAGAAGCCAAAGTTCAAGACTGTCCAAGAGGTGGTTGCAGCAGGCGAAGGAA-TACC 99
||||| ||||||||||||||||||||||||||| || ||||||| || ||| || ||||
Sbjct 1 ATGGAAAAGCCAAAGTTCAAGACTGTCCAAGAGCTGCTTGCAGCCGGAGAA-AAACTACC 59
Query 100 GGAGAGATACCTC--CAACCACCAGCCGTCGAC-GACAA--TGGTCAACATCTT-AACGC 153
||| ||||||||| | ||| ||| | | |||| || || || ||||| | || ||||
Sbjct 60 GGAAAGATACCTCTGC-ACC-CCAACAGGCGACGGAGAAGGTGATCAACCT-TTCAACG- 115
Query 154 TGCCG-TGCCGGTGATGGATATTCCGGCCATCGAT-TTGAGTCTTCTCCTCTCTCCTTCT 211
| || |||||| ||||| ||| || ||||||| || ||||||||||||||| |||||
Sbjct 116 TTTCGATGCCGGAAATGGAAATTATGGTCATCGATCTT-AGTCTTCTCCTCTCTTCTTCT 174
Query 212 GATGACGGTCGAGAAGAGTTGAGTAAACTTCACTCGGC-ACTCTCTACATGGGGAGTTGT 270
||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||
Sbjct 175 GATGACGGTCGAGAAGAGTTGAGTAAACTTCACTCAGCGA-TCTCTACATGGGGCGTTGT 233
Query 271 TCAGGTGATAAATCATGGAATTACAAAAGCGTTGCTCGACAAGATT-TACAAGCTAACCA 329
||||||||| |||||||||||| || |||| || |||||||||||| | | |||||| |
Sbjct 234 TCAGGTGATGAATCATGGAATTTCAGAAGCCTTTCTCGACAAGATTCT-CGAGCTAA-CG 291
Query 330 AGG-AGTTCTGTGCACTTCCGTCCGAAGAGAAACAAAAGTACGCGAGAGAGATTGGTAGT 388
||| |||||| || |||||| ||||||||||||| |||||||| ||||||||| |||||
Sbjct 292 AGGCAGTTCTTTGTGCTTCCGACCGAAGAGAAACATAAGTACGCAAGAGAGATTAGTAGT 351
Query 389 ATCCAAGGATATGGTAACGATATGATTCTGTGGGATGATCAAGTTCTTGATTGGATCGAC 448
| ||||||| ||| ||||| |||||||||| ||||||||||||||||| ||| |||||
Sbjct 352 TTTCAAGGATTTGGAAACGACATGATTCTGTCTGATGATCAAGTTCTTGACTGGGTCGAC 411
Query 449 CGTTTGTATATCACTACTTACCCTGAAGATCAGA-GACAACTTAAGTTCTGGCCTGATGT 507
|| ||||| ||| |||||| ||||||||||| | |||| ||||||||||||||| | |
Sbjct 412 CGCTTGTACCTCATTACTTATCCTGAAGATCA-ACGACAGCTTAAGTTCTGGCCTAAAAT 470
Query 508 CCC-TGTCGGATTCAGGGAAACTTTACATGAATACACAATGAAGCAACATCTAGTGTTTA 566
||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 471 CCCAAG-CGGATTCAGGGAAACTTTACATGAATACACAATGAAGCAACAGCTAGTGGTTG 529
Query 567 ATCAAGTCTTTAAAGCGATG-GCTATATCGTTGGAATTGGAAGAGAATTGCTTTCTAGAC 625
| || |||| || || || |||| |||||||| |||||||| ||||||||||||||
Sbjct 530 AGAAATTCTTCAAGGC-ATTAGCTAGATCGTTGGGGTTGGAAGATAATTGCTTTCTAGAG 588
Query 626 ATGTGTGGAGAAAATGCTACGATGGATACAAGATTCAACATGTATCCTCCATGTCCGAGG 685
||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 589 ATGCATGGTGAAAATGCTACGTTGGAGACAAGATTCAACATGTATCCTCCATGTCCGAGG 648
Query 686 CCGGACAAG 694
|||||||||
Sbjct 649 CCGGACAAG 657
Score = 257 bits (139), Expect = 1e-67
Identities = 284/350 (81%), Gaps = 25/350 (7%)
Strand=Plus/Plus
Query 752 AAAAATGTCGAAGGGCTTCAGTTCCTTAAAGATGGGAAGTGGTATAAAGCTCCAGTTGTC 811
|||||||| || || ||||||||||| |||||||||||||||||||||||| || | ||
Sbjct 658 AAAAATGTGGATGGACTTCAGTTCCTCAAAGATGGGAAGTGGTATAAAGCTTCAATCCTC 717
Query 812 GCTTCAGATACAATTCTGATCAATGTTGGAGATCA-GATGGAGATAATGAGCAATGGGAT 870
| || ||||||||||||||||||| |||||| | |||||| ||||||||||||| ||
Sbjct 718 -CCTC--ATACAATTCTGATCAATGTAGGAGAT-ACTATGGAGGTAATGAGCAATGGAAT 773
Query 871 ATACAAGAGCCCGGTTCATAGAGTGGTGACT-AATA-CAGAAAAAGAAAGGATATCTGTG 928
|||||||||||||||||||||||||||| || || | | ||||| | |||||||||||||
Sbjct 774 ATACAAGAGCCCGGTTCATAGAGTGGTG-CTTAACAAC-GAAAAGGCAAGGATATCTGTG 831
Query 929 GCAACGTTTTGC-ATTCCAGGTGCAGACAAAGAGATTCAGCCTGTTGA-TGGGCTTGTGT 986
| ||||||||| || | | || ||||||||||||||| ||||| | || ||||||||
Sbjct 832 GTAACGTTTTGTGATGCT-GATGAAGACAAAGAGATTCAACCTGTA-ACTGAGCTTGTGT 889
Query 987 CTGAGGCAAGACCAAGATTGTATAA-GCCAGTAAAAAACTATGTG--GACCT-CTTAAAC 1042
||||||| |||||||||||||| || || ||| || || | || | || || ||| |
Sbjct 890 CTGAGGCTAGACCAAGATTGTACAAAGC-AGTTAAGAAGTCTGAGAAGAACTTCTT---C 945
Query 1043 AAGTACTAT-ATACAGGGTCAAAGACCAATTGCAGC-GTCATTGATCTGA 1090
| |||||| | ||| |||| |||||| || | ||| | |||| ||||||
Sbjct 946 GATTACTATCA-ACAAGGTCGAAGACCGATCGAAGCTG-CATTTATCTGA 993
> Ahg941606 jgi|Araly1|941606|scaffold_602150.1
Length=493
Score = 433 bits (234), Expect = 2e-120
Identities = 268/285 (94%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 570 AAGTCTTTAAAGCGATGGCTATATCGTTGGAATTGGAAGAGAATTGCTTTCTAGACATGT 629
||||||| ||||| ||||||| ||| |||||||||||||||||||| |||||||||||||
Sbjct 7 AAGTCTTAAAAGCAATGGCTAGATCTTTGGAATTGGAAGAGAATTGTTTTCTAGACATGT 66
Query 630 GTGGAGAAAATGCTACGATGGATACAAGATTCAACATGTATCCTCCATGTCCGAGGCCGG 689
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 67 ATGGAGAAAATGCTATGATGGATACAAGATTCAACATGTATCCTCCATGTCCGAAGCCGG 126
Query 690 ACAAGGTTATTGGCGTTAGACCGCACGCTGATAAGTCGGCTTTCACTCTTCTCTTGCCTG 749
|||||||||| || |||| |||||| |||||||||||||||||||||||||||||||| |
Sbjct 127 ACAAGGTTATCGGTGTTAAACCGCATGCTGATAAGTCGGCTTTCACTCTTCTCTTGCCCG 186
Query 750 ACAAAAATGTCGAAGGGCTTCAGTTCCTTAAAGATGGGAAGTGGTATAAAGCTCCAGTTG 809
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 187 ACAAAAATGTCGAAGGGCTTCAGTTCCTCAAAGATGGGAAGTGGTATAAAGCTCCAATTG 246
Query 810 TCGCTTCAGATACAATTCTGATCAATGTTGGAGATCAGATGGAGA 854
|| || |||||||||||||||||||||||||||||||||||||||
Sbjct 247 TCTCTGCAGATACAATTCTGATCAATGTTGGAGATCAGATGGAGA 291
Score = 263 bits (142), Expect = 2e-69
Identities = 182/201 (91%), Gaps = 3/201 (1%)
Strand=Plus/Plus
Query 907 AGAAAAAGAAAGGATATCTGTGGCAACGTTTTGCATTCCAGGTGCAGACAAAGAGATTCA 966
||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct 291 AGAAAAAGAAAGGATATCTGTTGCAAC-TTTTTCATTCCAGGTGCAGACAAAGAGATTCA 349
Query 967 GCCTGTTGA-TGGGCTTGTGTCTGAGGCAAGACCAAGATTGTATAAGCCAGTAAAAAACT 1025
|||||| || |||||||||||| |||||||||||||||||||||||||| || || ||||
Sbjct 350 GCCTGT-GAATGGGCTTGTGTCCGAGGCAAGACCAAGATTGTATAAGCCTGTTAAGAACT 408
Query 1026 ATGTGGACCTCTTAAACAAGTACTATATACAGGGTCAAAGACCAATTGCAGCGTCATTGA 1085
||||| | ||||||||||| |||||| |||||||| ||||||||| |||||||| ||||
Sbjct 409 ATGTGAAGCTCTTAAACAATTACTATCTACAGGGTTTAAGACCAATCGCAGCGTCGTTGA 468
Query 1086 TCTGATCATATTTTTCAAGTC 1106
|||||||| | ||||||||||
Sbjct 469 TCTGATCACACTTTTCAAGTC 489
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46395589989
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5