BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G20960.1
Length=4484
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489007 jgi|Araly1|489007|fgenesh2_kg.6__2141__AT5G20960.2 6331 0.0
Ahg470440 jgi|Araly1|470440|fgenesh2_kg.1__394__AT1G04580.1 374 4e-102
Ahg481603 jgi|Araly1|481603|fgenesh2_kg.4__663__AT2G27150.1 283 7e-75
Ahg323092 jgi|Araly1|323092|fgenesh1_pm.C_scaffold_5000636 281 2e-74
> Ahg489007 jgi|Araly1|489007|fgenesh2_kg.6__2141__AT5G20960.2
Length=4302
Score = 6331 bits (3428), Expect = 0.0
Identities = 3905/4137 (94%), Gaps = 25/4137 (1%)
Strand=Plus/Plus
Query 45 TATGGGTGAGAAAGCGATTGACGAAGACAAAGTAGAAGCGATGAAGAGCAGCAAGACCTC 104
|||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1 TATGGGTGAGAAAGTGATTGAAGAAGACAAAGAAGAAGCGATGAAGAGCAGCAAGACCTC 60
Query 105 TCTTGTTTTCGCCATTAACGGACAAAGATTCGAGCTCGAGCTCTCTTCTATTGATCCTTC 164
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 61 TCTTGTTTTCGCCATTAACGGACAAAGATTCGAGCTCGAGCTCTCTTCCATTGATCCTTC 120
Query 165 CACCACACTCGTCGATTTCTTGCGCAACAAGACTCCTTTCAAGAGCGTCAAGCTTGGTTG 224
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 121 CACCACACTCGTTGATTTCTTGCGCAACAAGACTCCTTTCAAGAGCGTTAAGCTTGGTTG 180
Query 225 TGGCGAAGGTGGTTGTGGCGCTTGTGTTGTTCTTCTTTCAAAGTATGATCCATTGCTCGA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TGGCGAAGGTGGTTGTGGCGCTTGTGTTGTTCTTCTTTCAAAGTATGATCCATTGCTCGA 240
Query 285 AAAAGTCGATGAATTCACAATTAGCTCGTGTCTCACGCTTCTCTGTAGCATTGATGGCTG 344
|||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 241 AAAAGTCGATGACTTCACAATCAGCTCGTGTCTCACGCTCCTCTGCAGCATTGATGGCTG 300
Query 345 TTCCATCACTACCTCAGACGGGCTCGGCAACAGCAGAGTCGGTTTCCATGCCGTCCACGA 404
|| ||||||||||||||||||||||| || ||||||||||||||||| || ||||||||
Sbjct 301 CTCTATCACTACCTCAGACGGGCTCGGGAATAGCAGAGTCGGTTTCCACGCAGTCCACGA 360
Query 405 GCGTATCGCCGGTTTTCATGCCACACAATGCGGTTTCTGTACTCCTGGAATGAGCGTTTC 464
||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 361 GCGGATCGCTGGTTTTCATGCCACACAATGCGGTTTCTGTACACCTGGAATGAGCGTTTC 420
Query 465 GATGTTTTCTGCTCTCTTGAACGCTGATAAGTCTCATCCACCTCCTCGCAGCGGTTTCTC 524
|||||||| ||||||||||||||||||||||||||| || ||| |||||||||||||
Sbjct 421 CATGTTTTCCGCTCTCTTGAACGCTGATAAGTCTCAT---CCGCCTAGCAGCGGTTTCTC 477
Query 525 AAATCTCACGGCTGTAGAAGCTGAGAAGGCTGTGTCAGGGAATCTTTGCCGGTGTACTGG 584
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 AAACCTCACGGCTGTAGAAGCTGAGAAGGCTGTGTCAGGGAATCTTTGCCGGTGTACTGG 537
Query 585 ATATAGACCGCTTGTGGATGCTTGTAAGAGTTTTGCAGCGGATGTGGATATCGAAGATCT 644
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 ATACAGACCGCTTGTGGATGCTTGTAAGAGTTTTGCAGCGGATGTGGATATCGAAGATCT 597
Query 645 CGGAT-TCAATGCCTTTTGCAAGAAGGGAGAAAACAGAGATGAGGTTTTAAGAAGGTTGC 703
||||| | ||| |||| ||||||||||||||||||||||| | ||||||| |||||||||
Sbjct 598 CGGATAT-AATTCCTTCTGCAAGAAGGGAGAAAACAGAGAGGTGGTTTTAGGAAGGTTGC 656
Query 704 CATGTTATGATCATACATCATCTCATGTCTGTACATTTCCGGAGTTCTTGAAGAAGGAAA 763
||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 657 CATGTTATGATCATACAACATCTCAGGTCTGTACATTTCCGGAATTCTTGAAGAACGAAA 716
Query 764 TCAAGAACG--A-TATGAGTCTTCATTCAAGAAAGTATC-GATGGTCAAGCCCGGTTAGT 819
||||||||| | |||||||||| ||||||||||||| | |||||||| |||||||||||
Sbjct 717 TCAAGAACGATATTATGAGTCTTGATTCAAGAAAGTA-CAGATGGTCATGCCCGGTTAGT 775
Query 820 GTCTCAGAGCTTCAAGGGTTATTAGAAGTCGAGAATGGTTTGTCGGTTAAGTTAGTTGCG 879
|| || || ||||||| ||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct 776 GTGTCGGATCTTCAAGAGTTATTAGAAGCCGAAAATGGAGTGTCGGTTAAGTTAGTTGCG 835
Query 880 GGTAACACGAGCACCGGGTATTACAAAGAAGAAAAAGAGAGGAAGTACGAAAGATTTATC 939
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 836 GGTAACACAAGCACCGGGTATTACAAAGAAGAAAAAGAGAGGAAGTACGAAAGATTTGTC 895
Query 940 GATATCAGGAAGATTCCGGAGTTTACTATGGTGAGAAGTGATGAGAAAGGAGTTGAATTA 999
||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct 896 GATATCAGGCGGATTCCAGAGCTCACTATGGTGAGAAGTGATGAGAAAGGAGTTGAATTA 955
Query 1000 GGAGCTTGTGTCACTATATCGAAAGCTATTGAGGTTCTAAGAGAGGaaaaaaaTGTTTCT 1059
||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||
Sbjct 956 GGAGCTTGTGTTACTATATCCAAAGCTATTGAGGTTCTAAGAGAGGAAGAAAATGTTCCT 1015
Query 1060 GTGTTGGCGAAAATCGCTACTCATATGGAGAAAATTGCAAACAGATTCGTGAGGAACACG 1119
||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 ATGTTGGCAAAAATTGCGACTCATATGGAGAAAATTGCAAACAGATTCGTGAGGAACACG 1075
Query 1120 GGAACGATAGGTGGAAACATTATGATGGCTCAGAGAAAACAGTTTCCTTCGGATCTTGCA 1179
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 1076 GGAACGATAGGTGGAAACGTAATGATGGCTCAGAGAAAACAGTTTCCTTCGGATCTCACA 1135
Query 1180 ACCATACTTGTTGCTGCTCAAGCAACGGTGAAGATCATGACTAGCAGCTCGAGTCAAGAA 1239
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1136 ACCATACTTGTTGCTGCTCGAGCAACGGTGAAGATCATGACTAGCAGCTCGGGTCAAGAA 1195
Query 1240 CAGTTCACATTGGAGGAGTTTCTACAACAACCTCCTCTTGATGCAAAATCTCTTCTTTTG 1299
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1196 CAGTTCACATTGGAAGAGTTTCTACAACAGTCTCCTCTTGATGCAAAATCTCTTCTTTTG 1255
Query 1300 AGCCTCGAGATTCCATCTTGGCACTCCGCGAAGAAGAACGGTTCTTCAGAAGATAGTATT 1359
|||||||||||||| ||||||| | ||||||| |||||||||||||| ||||| ||||
Sbjct 1256 AGCCTCGAGATTCCGTCTTGGCGCCCCGCGAAAAAGAACGGTTCTTCTTCAGATACTATT 1315
Query 1360 TTGCTATTTGAAACTTACAGAGCAGCGCCTCGTCCTCTAGGAAACGCATTGGCATTTCTG 1419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 TTGCTCTTTGAAACTTACAGAGCAGCGCCTCGTCCTCTAGGAAACGCATTGGCATTTCTG 1375
Query 1420 AATGCGGCTTTCTCAGCTGAAG----TT--ACTGAAGCACTTGATGGCATTGTTGTAAAT 1473
||||| |||||||||||||||| || | ||||||||||||||||||| ||||||||
Sbjct 1376 AATGCAGCTTTCTCAGCTGAAGTTTCTTCAAGTGAAGCACTTGATGGCATTTTTGTAAAT 1435
Query 1474 GATTGCCAATTAGTTTTTGGAGCTTATGGGACCAAACATGCACACAGGGCAAAGAAAGTA 1533
|||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||
Sbjct 1436 GATTGCCAATTAGTTTTTGGGGCTTATGGGACCAAACACGCTCACAGGGCAAGGAAAGTG 1495
Query 1534 GAAGAGTTTCTTACAGGAAAAGTGATATCTGATGAAGTTTTGATGGAAGCTATTAGCTTA 1593
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1496 GAAGACTTTCTTACAGGAAAAGTGATATCTGATGAAGTTTTGATGGAAGCTATTGGCTTA 1555
Query 1594 CTTAAAGATGAGATAGTACCTGATAAGGGTACTTCGAATCCCGGGTATAGATCAAGCTTG 1653
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1556 CTTAAAGATGAGATAGTACCTGATAAGGGTACTTCGAATCCCGAATATAGATCAAGCTTG 1615
Query 1654 GCTGTTACTTTTCTCTTCGAGTTCTTCGGATCTTTAACTaaaaaaaaCGCTAAAACGACA 1713
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct 1616 GCTGTTACTTTTCTCTTCGAGTTCTTCGGATCTTTAACTCAAACAAACGCTAAAACTACA 1675
Query 1714 AACGGTTGGCTCAATGGAGGATGCAAAGAGATTGGTTTTGATCAGAATGTTGAATCTTTG 1773
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1676 AACGGTTGGCTCAATGGAGGATGCAAAGAGATAGGTTTTGATCAGAATGTTGAATCTTTG 1735
Query 1774 AAACCT---GAAGCTATGCTGTCATCTGCACAACAAATAGTTGAAAATCAAGAGCATAGT 1830
|||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1736 AAACCTGAAGAAGCTATGTTGTCATCTGCACAACAGATAGTTGAAAATCAAGAGCATAGT 1795
Query 1831 CCGGTCGGGAAAGGCATTACAAAGGCTGGAGCTTGTCTCCAAGCATCTGGTGAGGCTGTT 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CCGGTCGGGAAAGGCATTACAAAGGCTGGAGCTTGTCTCCAAGCATCTGGTGAGGCTGTT 1855
Query 1891 TATGTAGACGACATTCCTGCTCCGGAAAATTGTCTATACGGCGCATTTATTTACAGTACA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 TATGTAGACGACATTCCTGCTCCGGAAAATTGTCTATACGGCGCATTTATTTACAGTACA 1915
Query 1951 ATGCCGCTAGCGCGAATTAAGGGTATAAGGTTCAAGCAAAACAGAGTTCCAGAAGGAGTT 2010
|||||| | ||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1916 ATGCCGTTGGCGCGGATTAAGGGTATAAGGTTCAAGAAAAACAGAGTTCCAGAAGGAGTT 1975
Query 2011 CTTGGCATTATTACTTACAAAGATATTCCCAAAGGCGGGCAAAATATCGGTACCAACGGT 2070
|||||||| |||||||||| |||||||||||||| |||| ||||||||||||||||||||
Sbjct 1976 CTTGGCATAATTACTTACAGAGATATTCCCAAAGACGGGAAAAATATCGGTACCAACGGT 2035
Query 2071 TTCTTTACCTCGGATCTTTTGTTCGCAGAAGAAGTCACTCATTGTGCGGGTCAGATAATC 2130
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 2036 TTCTTTACCTCGGATCTTTTGTTCGCAGAGGAAATCACTCATTGTGCGGGTCAGATAATC 2095
Query 2131 GCCTTTTTGGTTGCAGATAGTCAAAAGCATGCAGATATTGCAGCAAATCTTGTTGTGATA 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2096 GCCTTTTTGGTTGCAGATAGTCAAAAGCATGCAGATATTGCAGCAAATCTTGTTGAGATA 2155
Query 2191 GATTACGACACCAAAGATTTAAAACCA-CCTATACTGTCCTTAGAAGAAGCTGTCGAAAA 2249
|||||||| |||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct 2156 GATTACGATACCAAAGATTTAGAAC-AGCCTATACTGTCCTTAGAAGAAGCTGTCGAAAA 2214
Query 2250 CTTTAGCCTTTTCGAGGTCCCTCCACCTCTGCGTGGTTACCCGGTTGGTGATATCACCAA 2309
| |||| |||| ||||||||||||||||||||| |||||||||| |||||||| |||||
Sbjct 2215 GTCTAGCTTTTTTGAGGTCCCTCCACCTCTGCGTTGTTACCCGGTCGGTGATATTACCAA 2274
Query 2310 GGGAATGGATGAAGCTGAACATAAGATTCTTGGATCAAAGATAAGTTTCGGGTCACAGTA 2369
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2275 GGGAATGGATGAAGCTGAACATAAGATTCTTGGATCAAAGATAAGTTTTGGGTCACAGTA 2334
Query 2370 CTTCTTCTATATGGAGACACAAACAGCTCTTGCAGTGCCGGATGAAGACAACTGTATGGT 2429
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2335 CTTCTTCTATATGGAGACACAAACGGCTCTTGCAGTGCCGGATGAAGACAACTGTATGGT 2394
Query 2430 GGTTTATAGCTCGACTCAAACCCCTGAGTTTGTACATCAAACCATCGCTGGATGTCTTGG 2489
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2395 GGTTTATAGTTCGACTCAAACCCCTGAATTTGTACATCAAACCATCGCTGGATGTCTTGG 2454
Query 2490 AGTTCCTGAGAACAATGTGCGTGTCATCACTAGAAGAGTTGGAGGCGGATTCGGTGGGAA 2549
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2455 AGTTCCTGAGCACAATGTGCGTGTCATCACTAGAAGAGTTGGAGGCGGATTCGGTGGGAA 2514
Query 2550 AGCCGTGAAATCAATGCCTGTTGCTGCAGCTTGTGCACTTGCAGCATCCAAAATGCAGCG 2609
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 2515 GGCCGTGAAATCAATGCCCGTGGCTGCAGCTTGTGCACTTGCAGCATCCAAAATGCAGCG 2574
Query 2610 TCCTGTGAGGACATATGTGAACCGAAAAACGGATATGATAACTACCGGAGGAAGACATCC 2669
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2575 TCCAGTGAGGACATATGTGAACCGGAAAACGGATATGATAACTACCGGAGGAAGACATCC 2634
Query 2670 GATGAAAGTCACATATAGTGTTGGATTCAAATCCAATGGAAAGATTACTGCTTTAGATGT 2729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2635 AATGAAAGTCACATATAGTGTTGGATTCAAATCCAATGGAAAGATTACTGCTTTAGATAT 2694
Query 2730 AGAGGTGTTACTTGATGCAGGGTTAACCGAAGATATAAG-CCCGCTTATGCCGAAGGGAA 2788
||||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct 2695 AGAGGTGCTACTTGATGCAGGGTTAACCGAAGATATAAGTCCC-CTTATGCCAAAGGGAA 2753
Query 2789 TACAAGGAGCACTAATGAAGTATGATTGGGGTGCTCTGTCTTTCAATGTGAAAGTATGCA 2848
| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 2754 TCCAAGGAGCACTGATGAAGTATGATTGGGGTGCTCTATCTTTGAATGTGAAAGTGTGCA 2813
Query 2849 AAACAAACACTGTGAGCAGAACCGC-GCTGAGAGCTCCTGGGGATGTACAAGGATCATAT 2907
||||||||||||||||||||||||| | | |||||||| ||||||||||||||||||||
Sbjct 2814 AAACAAACACTGTGAGCAGAACCGCTGTT-AGAGCTCCCGGGGATGTACAAGGATCATAC 2872
Query 2908 ATAGGAGAAGCCATCATTGAAAAAGTAGCTTCATATCTTTCAGTTGATGTTGATGAGATC 2967
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2873 ATAGGAGAAGCCATCATTGAAAAAGTAGCTTCATATCTTTCAGTTGATGTGGATGAGATC 2932
Query 2968 AGGAAGGTTAATCTTCATACATATGAGAGCTTAAGGTTGTTTCACAGTGCCAAAGCTGGT 3027
|||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2933 AGGAAGGTTAATCTCCATACCTATGAGAGCTTAAGGTTGTTTCACAGTGGCAAAGCTGGC 2992
Query 3028 GAATTTTCTGAGTATACGTTACCATTGCTTTGGGACAGAATCGATGAGTTCTCGGGATTT 3087
|||| |||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2993 GAATGCTCTGAGTACACTTTACCATTGCTTTGGGACAAAATCGATGAGTTCTCGGGATTT 3052
Query 3088 AACAAGCGGAGGAAGGTGGTTGAGGAGTTTAATGCATCAAACAAGTGGAGAAAGAGAGGG 3147
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3053 AACCAGCGGAGGAAGGTCGTTGAGGAGTTTAATGCATCAAACAAGTGGAGAAAGAGAGGG 3112
Query 3148 ATTTCACGTGTGCCTGCGGTTTATGCAGTGAACATGCGATCAACACCGGGAAGAGTAAGC 3207
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3113 ATTTCACGTGTGCCTGCGGTTTATGCAGTGAATATGCGATCAACACCGGGAAGAGTAAGC 3172
Query 3208 GTTTTGGGAGATGGGTCAATAGTTGTGGAGGTTCAAGGGATTGAGATAGGACAAGGGCTT 3267
|||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct 3173 GTTTTGGGCGATGGATCAATAGTGGTTGAGGTTCAAGGGATTGAGATAGGACAAGGGCTT 3232
Query 3268 TGGACAAAGGTGAAACAGATGGCTGCATATTCCCTTGGTTTGATCCAGTGCGGTACTACA 3327
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3233 TGGACAAAGGTGAAACAGATGGCTGCATATTCCCTTGGTTTGATCCAATGCGGTACTACA 3292
Query 3328 AGTGATGAACTGCTTaaaaaaaTCAGGGTCATTCAATCCGACACACTAAGTATGGTGCAA 3387
|||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 3293 AGTGATGAGCTGCTCAAGAAAATCAGGGTCATTCAATCCGACACCCTAAGTATGGTGCAG 3352
Query 3388 GGCTCAATGACTGCTGGTAGTACAACCTCTGAAGCGAGTAGTGAAGCGGTAAGGATTTGC 3447
|||||||||||||||||||| ||||||||||| ||||| || |||||||| || ||||||
Sbjct 3353 GGCTCAATGACTGCTGGTAGCACAACCTCTGAGGCGAGCAGCGAAGCGGTTAGAATTTGC 3412
Query 3448 TGTGATGGCTTAGTTGAAAGGCTTTTACCAGTCAAGACCGCTTTGGTGGAGCAAACAGGA 3507
|||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3413 TGTGATGGATTAGTCGATAGGCTTTTACCCGTCAAGACCGCTTTGGTGGAGCAAACAGGA 3472
Query 3508 GGACCTGTGACTTGGGATAGTCTCATCAGTCAGGCTTATCAGCAATCGATAAACATGTCC 3567
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 3473 GGACCTGTGACTTGGGATAACCTCATCAGTCAGGCTTATCGGCAATCGATAAACATGTCG 3532
Query 3568 GTTAGTAGCAAATACATGCCTGACTCCACTGGCGAATACCTGAACTATGGAATTGCAGCG 3627
|||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||
Sbjct 3533 GTTAGTAGCAAATACATGCCGGACTCCACTGGCCAATACCTTAATTATGGAATTGCTGCT 3592
Query 3628 AGCGAGGTTGAAGTAAACGTTTTGACGGGAGAAACAACGATCCTGCGTACAGATATTATC 3687
|||||||||||| |||| ||||||||||||||||||||||| ||||| || |||||||||
Sbjct 3593 AGCGAGGTTGAAATAAATGTTTTGACGGGAGAAACAACGATTCTGCGCACGGATATTATC 3652
Query 3688 TATGATTGTGGGAAGAGTCTCAATCCCGCTGTTGATTTAGGACAGATTGAAGGAGCCTTT 3747
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3653 TATGATTGCGGGAAGAGTCTCAATCCCGCTGTTGATTTAGGACAGATTGAAGGAGCATTT 3712
Query 3748 GTTCAAGGACTTGGTTTCTTCATGCTTGAAGAGTTCCTAATGAACTCAGACGGTCTCGTG 3807
|||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct 3713 GTTCAAGGACTTGGGTTCTTTATGCTGGAAGAGTTCCTAATGAACTCAGACGGTCTTGTG 3772
Query 3808 GTAACAGACAGCACATGGACTTACAAGATCCCAACGGTTGACACAATCCCAAGACAGTTT 3867
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3773 GTAACAGACAGCACATGGACTTACAAGATCCCAACGGTTGACACAATCCCAAGACAGTTC 3832
Query 3868 AATGTGGAGATTCTCAACAGTGGACAACACAAGAATCGTGTTCTTTCATCCAAAGCTTCG 3927
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3833 AATGTCGAGATTCTCAACAGTGGACAACACAAGAATCGTGTTCTCTCATCCAAAGCTTCG 3892
Query 3928 GGTGAACCGCCATTGCTTTTAGCGGCTTCTGTTCACTGCGCGGTACGAGCAGCTGTTAAA 3987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3893 GGTGAACCGCCATTGCTTTTAGCGGCTTCTGTTCACTGCGCGGTACGAGCAGCTGTTAAA 3952
Query 3988 GAAGCTAGGAAACAGATCCTGTCATGGAATAGTAATAAACAAGGGACTGATATGTACTTC 4047
||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||
Sbjct 3953 GAAGCCAGGAAACAGATCCTGACATGGAATAGTAACCAACAAGGGACTGATCTGTGCTTC 4012
Query 4048 GAATTGCCTGTTCCAGCAACAATGCCTATTGTGAAGGAGTTTTGTGGACTTGATGTTGTC 4107
||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 4013 GAATTGCCTGTACCAGCAACAATGCCTGTTGTGAAGGAGTTTTGTGGACTCGATGTTGTC 4072
Query 4108 GAGAAATACTTGGAATGGAAAATCCAGCAAAGGAAAAATGTTTGATAGCTTGTGTTT 4164
|||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||
Sbjct 4073 GAGAAATACTTGGAATGGAAAATCAAGCAACGGAAGAACGTTTGATAGCTTGTGTTT 4129
> Ahg470440 jgi|Araly1|470440|fgenesh2_kg.1__394__AT1G04580.1
Length=4097
Score = 374 bits (202), Expect = 4e-102
Identities = 1507/2110 (71%), Gaps = 197/2110 (9%)
Strand=Plus/Plus
Query 2005 GGAGTTCTTGGCA-TTATTACTTACAAAGATATTCC-CAAAG-GCGGGCAAAATATCGG- 2060
|||||| |||||| ||||||||| ||| |||||||| | ||| | |||||||| || ||
Sbjct 1879 GGAGTT-TTGGCAGTTATTACTTTCAAGGATATTCCTC-AAGTG-GGGCAAAACATTGGT 1935
Query 2061 TACCA-A-CGGTTTCTTTACCTC-GGATCTTTTGTTCGCAGAAGAAGTCACTCAT-TGTG 2116
|| || | | | | ||| | | || ||| | || ||||| ||||| ||| || | ||
Sbjct 1936 TA-CATATC-G-ATGTTTGGCACAGG-GCTTCTATTTGCAGATGAAGTTACT-ATATCTG 1990
Query 2117 CGGGTCAGATAATCGCCT-TTTTGGTTGCAGATAGTCAAAAGCATGCAGATATTGCAGCA 2175
| || || ||||| | || || |||||||||| | ||||| ||||| ||||| ||||||
Sbjct 1991 CCGGACAAATAATTG-CTCTTGTGGTTGCAGACACACAAAAACATGCCGATATGGCAGCA 2049
Query 2176 AATCTTGTTGTGA-TAGATTACGACACCAAAG-ATTTA-AAACCACCTA-TACTGTCCT- 2230
|| || | || | | || ||||| ||| | || || || |||| | || | | ||
Sbjct 2050 AACCTCGCAGT-AGTTGAGTACGA-TTCAAGGTATATAGGAA-CACC-AGTATTAT-CTG 2104
Query 2231 TAGAAGAAGCTGTCGAAAA-CTTTAGCCTTTTCGAGGTCCCT-CC-ACCT-CTGCGTGGT 2286
| || || || ||| |||| | |||||||| ||||| ||| || | | | | |
Sbjct 2105 TGGAGGATGCAGTC-AAAAGGTCCAGCCTTTTTGAGGTTCCTCCCGA-GTATTACCCCG- 2161
Query 2287 TACCCGGTTGGTGATATCACCAAGGGAATGGATGAAGCTGAACATAAGAT--TCTTGGAT 2344
|||| ||||| ||||| | || ||||||| ||||||||| | ||||| || | |
Sbjct 2162 AACCC-GTTGGCGATATTTCAAAAGGAATGGCTGAAGCTGATCGCAAGATACGCTCAG-T 2219
Query 2345 CAAAGATAAG-TTTCGGGTCACAGTACTTCTTCTATATGGAGACACAAACAGCTCTTGCA 2403
| || | || || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2220 -AGAGTTGAGACTT-GGGTCACAGTACTTCTTCTATATGGAGACACAAACAGCACTTGCC 2277
Query 2404 GTGCCGGATGAAGACAACTGTATGGTGGTTTATAGCTCGACTCAAAC-CCCTGAGTTTGT 2462
|||| || |||||||||||| | |||||||| || || |||||| | ||| ||||
Sbjct 2278 TTGCCAGACGAAGACAACTGTTTAGTGGTTTACAGTTCAACTCAATCACCC-GAGTACAC 2336
Query 2463 ACA-TCAA-ACCATCGCTGGATGTCTTGGAGTTCCTGAGAACAATGTGCGTGTCATCACT 2520
||| ||| | || ||| |||||||||| |||| | | | || || || ||||||||
Sbjct 2337 ACAATCAGTA--ATTGCTACATGTCTTGGAATTCCAGCGCATAACGTTCGAGTCATCACC 2394
Query 2521 AGAAGAGTTGGAGGCGGATTCGGTGGGAAAGCCGTGAAA-TCAATGCCTGTTGCTGCAGC 2579
|||||| ||||||| || || ||||| ||||| | ||| || ||||||||||| ||||
Sbjct 2395 AGAAGAATTGGAGGTGGCTTTGGTGGAAAAGCTAT-AAAGTCTATGCCTGTTGCAACAGC 2453
Query 2580 TTGTGCACTTGCAGCATCCAAAATGCAGCGTCCTGTGAGGACATATGTGAACCGAAAAAC 2639
||||| ||||| ||| |||||||||| |||||| |||| ||| || ||||| || ||
Sbjct 2454 ATGTGCGCTTGCTGCAAAAAAAATGCAGCATCCTGTAAGGATATACGTCAACCGTAAGAC 2513
Query 2640 GGATATGATAACTACC-GGAGGAAGACATCCGATGAAAGTCACATATAGTGTTGGATTCA 2698
|||||| ||| | | |||||||| ||||| |||||| | || || ||||| || ||||
Sbjct 2514 TGATATGGTAA-TGGCTGGAGGAAGGCATCCCATGAAAATAACTTACAGTGTAGGTTTCA 2572
Query 2699 AATCCAATGGAAAGATT-ACTGCTTTAGATG-TAGAGGTGTTACTTGATGCAGGGT-TAA 2755
||| | || || | | || || ||| | || | ||||| | |||||||||| | |
Sbjct 2573 GATCTGACGGTAA-ACTCACAGCACTAGC-GCTAAATATGTTAATAGATGCAGGGTGTGA 2630
Query 2756 CCGAAGATATAAGCCC-GCTTATGCCGA-AGGGAATACAAGGAG--CACTAATGAAGTAT 2811
| ||| |||| | | | ||||| | || |||| || || | || | ||| |||
Sbjct 2631 T-GTGGATGTAAGTCTAG-TAATGCC-ACAG--AATATAATGAATTCCCTGAGGAAATAT 2685
Query 2812 GATTGGGGTGC-TCTGTC-TTTCA-ATGTGAAAGTATGCAAAACAAACACTGT--GAGCA 2866
|| ||||| || | |||| ||| | || | ||||| || || |||||| || | |||||
Sbjct 2686 GAATGGGGCGCAT-TGTCATTTGACAT-T-AAAGTGTGTAAGACAAAC-CT-TCCGAGCA 2740
Query 2867 GAACCG-CGCTGAGAGCTCCTGGGGATGTACAAGGATCATATATAGGAGAAGCCATCATT 2925
|||| | | | || || || || || |||||||| ||||| || | ||| |||| |||
Sbjct 2741 GAAC-GTCTTTAAGGGCACCCGGTGAGGTACAAGGTTCATACATTGCTGAATCCATTATT 2799
Query 2926 GAAAAAGTAGCTTCATATCTTT-CAGTTGATGTTGATGA-GATCAGGAAGGTTAA-TCTT 2982
|| || ||||| || | || || | || || |||| | | || |||| ||| ||||
Sbjct 2800 GAGAATGTAGCATCTTCCCTGAACA-TGGACGTGGATGTTG-TGAG-AAGGATAAATCTT 2856
Query 2983 CATACATATGAGAGCTTAAGGTTGTTTCACAGTGCCAAA--GCTGGTGAATTTTCTGAGT 3040
||||| || || ||| | || |||| | | || || |||||||| | ||| |
Sbjct 2857 CATACTTACGAAAGCCTCAGCAAGTTTTATAA-GC-AAGTTGCTGGTGAGCCTGATGAAT 2914
Query 3041 ATACGTTACCATTGCTT-TGGGACAGAATCG-ATGAGT-TCT-CGGGATTTAA--C-AAG 3093
|||| || || || || ||||| | ||| | | || | ||| | | |||| | | |||
Sbjct 2915 ATACTTTGCCTTTA-TTGTGGGATA-AATTGGA-GA-TATCTGCAG-ATTTCAGGCGAAG 2969
Query 3094 CGGAGGAAGGTGGTTGAG-GAGTTTAAT-GCATCAAACA-AGTGGAG-AAAGAGAGGGAT 3149
|| ||| ||| || |||||||| | || |||| | ||| | ||| || |||||
Sbjct 2970 -GGTTGAATC-GGT-GAAAGAGTTTAACCG-ATGTAACATA-TGGCGCAAA-AGGGGGAT 3023
Query 3150 TTCACGTGTGCC--TGCGGTTTATGCA-GT-GAACAT-GCGATCAACACCGGGAAGAGTA 3204
||| || || || | | | || || || | ||| | | |||| || |||| ||||
Sbjct 3024 TTCTCGAGTACCCAT-CA-TCCAT-CAAGTTGTGCATAG-GC-CAACTCCAGGAAAAGTA 3078
Query 3205 AGCGTTTTGGGA-GATGGGTCAATAGTTGTGGAGGTT-CAAGGGATTGAGATAGGACAAG 3262
||| ||||| | ||||| || | | || |||||| || ||||||||| | || ||||
Sbjct 3079 AGCATTTTGA-ATGATGGTTCGGTTGCGGTTGAGGTTGCA-GGGATTGAGGTGGGGCAAG 3136
Query 3263 GGCTT-TGGACAAAGGTGA-AACAGATGGCTGCATATTCCCTTGGTTTGATCCAGTGCGG 3320
|| || ||||||||||| | ||||||||| ||| ||| |||||| |||| | ||||
Sbjct 3137 GG-TTGTGGACAAAGGT-ACAACAGATGGTTGCTTATGGTCTTGGTATGATAAAATGCG- 3193
Query 3321 TACTACAAGTGATGAACTGCTTaaaaaaaTCAGGG-T-CATTCA-ATCCGACACACTAAG 3377
|| |||||| || |||||| ||| ||| | || | | |||| | | |||||||| ||
Sbjct 3194 -ACGG-AAGTGAAGATCTGCTTGAAAGAAT-ACGGCTTC-TTCAGA-CTGACACACTCAG 3248
Query 3378 TATGG-TGCAAGGCTCAATGAC--TGCTGGTAGTACAACCTCTGA-AGCGAGTAGTGAAG 3433
||||| | ||| || | | || ||| ||||| ||||| || || | | || ||||||
Sbjct 3249 TATGGCT-CAAAGC--AGTTACACTGCGGGTAGCACAACATCCGAGAACT-GTTGTGAAG 3304
Query 3434 CGGTAAGGATTTGCTGTGATGGCTTAGTTGAAAGGCTTTTACC-AGTCAAGAC-C-GCTT 3490
| || ||| ||||||| | | ||| || || ||||| ||| | || || | | ||
Sbjct 3305 CAGTGAGGCTTTGCTGCGGTATCTTGGTGGAGAGGCTGAAACCTAC-CATGAATCAGATT 3363
Query 3491 TGGTGGAGCAAA-CAGGAGGACCTGTGACTTGGGATA-GTCTCAT-CAGTCAGGCTTAT- 3546
||||| || | || || ||||| ||||| | | ||||| || ||||| |||
Sbjct 3364 C--TGGAG-AATGCTCGAT--CC-GTGACATGGGACATG-CTCATTCAA-CAGGCATATG 3415
Query 3547 CAGCAATC-GATAAACATGTCCGTTAGTAGCAAAT-ACATGCCTGACTCCACTG--GC-G 3601
| ||||| | | || | || | | | | || | | | ||| || ||| || || |
Sbjct 3416 CT-CAATCTG-TGGACCTATCAGCTCGGA-CATTTTATAAGCCAGAGTCCTCTTCTGCAG 3472
Query 3602 AATACCTGAACTATGGAATTGCAGCGAGCGAGGTTGAAGTAAACGTTTTGACGGGA-GAA 3660
|||| || ||||| ||| ||| ||| || ||||| || || || || |||| ||| |||
Sbjct 3473 AATATCTCAACTACGGAGTTGGAGCCAGTGAGGTGGAGGTTGACCTTGTGACAGGAAGAA 3532
Query 3661 -ACAACGATCCTGCG-TACAGATATTATCTATGATTGTGGGAAGAGTCTCAATCCCGCTG 3718
| || || | | | |||||||||||||||| ||||| || || || ||||| ||||
Sbjct 3533 CAGAA--ATTATAAGAT-CAGATATTATCTATGACTGTGGAAAAAGCCTTAATCCTGCTG 3589
Query 3719 TTGATTTAGGACAGATTGAAGGAGCCTTTGTTCAAGGACTTGG-TTTCTTCATGCT-TGA 3776
|||||||||||||||| |||||||| |||||||||||| | || ||| |||||| | |||
Sbjct 3590 TTGATTTAGGACAGATCGAAGGAGCGTTTGTTCAAGGAATAGGGTTT-TTCATG-TATGA 3647
Query 3777 AGAGTTC-CTA-ATGAACTCAGA-CGGTCTCGTG--GTAACAGACAGC-ACATGG-ACTT 3829
|||| | | | | || | | | ||| || ||| | || || || |||||| |||
Sbjct 3648 GGAGTACACGACA--AA-TGAAAACGGGCTTGTGAAGGAA--GA-AGGTACATGGGACT- 3700
Query 3830 ACAAGATCCCAACGGTTGACACAAT-CCCAAGACAGTTTAATGTGGAGATTCTCAACAGT 3888
|||| || || || | |||||||| ||||| ||| || || || ||||||||||||||
Sbjct 3701 ACAAAATACCTACAATAGACACAATTCCCAA-ACAATTCAACGTTCAGATTCTCAACAGT 3759
Query 3889 GGACAACACAAGAATCGTGTTCTTTCATCCAAAGCTTCGGGTGAACCGCCATTGCTTTTA 3948
|| || |||||||| || ||||||| || |||||||| ||||| || || |||||| |
Sbjct 3760 GGTCATCACAAGAACCGCATTCTTTCCTCTAAAGCTTCAGGTGAGCCTCCGTTGCTTGTG 3819
Query 3949 GCGGCTTCTGTTCACTGCGCGGTACGAGCAGCTGTTAAAGAAGCTAGGAAACAG-ATCCT 4007
||||||||||| ||||| || | || |||| ||| ||||||| | |||||| | |||
Sbjct 3820 GCGGCTTCTGTGCACTGTGCAACAAGATCAGCCATTAGAGAAGCTCGAAAACAGTA-CCT 3878
Query 4008 GTCATGGAAT 4017
|||||||||
Sbjct 3879 TTCATGGAAT 3888
> Ahg481603 jgi|Araly1|481603|fgenesh2_kg.4__663__AT2G27150.1
Length=4259
Score = 283 bits (153), Expect = 7e-75
Identities = 973/1353 (72%), Gaps = 120/1353 (9%)
Strand=Plus/Plus
Query 2005 GGAGTTCTTGGCA-TTATTACTTACAAAGATATTCCCA-AAGGCGGGCAAAATATCGGTA 2062
|||||| || ||| || |||||| ||| |||||| ||| || | || ||||| || |||
Sbjct 1982 GGAGTT-TTTGCAGTTCTTACTTTCAAGGATATT-CCAGAACGAGGACAAAACATTGGTT 2039
Query 2063 CC-A-ACGGTTTCTT-TACCTCGGATCTTTTGTTCGCAGAAGAAGTCACTC-ATTGTGCG 2118
|| | || ||| || ||| ||| | ||| || ||||| ||| | |||| | |||||
Sbjct 2040 CCAAGACCCTTT-TTGGACC-AGGA-CCTTTATTTGCAGATGAACTAACTCGA-TGTGCT 2095
Query 2119 GGTCAGATAATCGCCT-TTTTGGTTGCAGATAGTCA-AAAGCATGCAGATATTGCAGCAA 2176
||||| | ||| | || || |||||||||| | || ||| |||||||| | |||||||
Sbjct 2096 GGTCAAAGAATTG-CTCTTGTGGTTGCAGACACACAGAAA-CATGCAGACAGGGCAGCAA 2153
Query 2177 ATCTTGTTGTGA-TAGATTACGACACCAAAG-ATTTAAAACCACCTATACTGT-CCT-TA 2232
| |||| || | | || || || | ||| | ||||| ||| ||| ||| | | || |
Sbjct 2154 AACTTGCAGT-AGTTGAGTATGATA-CAACGAATTTAGAACAACCGATA-T-TAACTGTC 2209
Query 2233 GAAGAAGCTGTCGAAAA-CTTTAGCCTTTTCGAGGTCCCTCC-A-CCTCT-GCGTGGTTA 2288
||||| || || |||| | |||| ||||||||||| ||| | | | | | | |
Sbjct 2210 GAAGATGCAGT-TAAAAGATCTAGCTTTTTCGAGGTCTATCCGATGTTTTACCCT-G--A 2265
Query 2289 CCCGGTTGGTGATATCACCAAGGGAATGGATGAAGCTGAACATAAGAT--TCTTGGATCA 2346
|| || |||||| | | || |||||||| |||||||| | ||||| | | || |
Sbjct 2266 ACCAGTCGGTGATGTTATAAAAGGAATGGAAGAAGCTGAGCGGAAGATAATGTCGG--CC 2323
Query 2347 AAGAT-AAGTTTCGGGTCACAGTACTTCTTCTATATGGAGACACAAACAGCTCTTGCAGT 2405
|| | | | ||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct 2324 GAGTTGACG-CTCGGGTCACAGTACTTCTTCTATATGGAGCCACAAACAGCACTTGCCTT 2382
Query 2406 GCCGGATGAAGACAACTGTATGGTGGT-TTATAGCTCGA-CTCAAACCCCTGAGTTTGTA 2463
||| ||||||||||| ||| | ||| || ||| || | ||||| | ||||||| ||
Sbjct 2383 GCCAGATGAAGACAATTGTGTCAAGGTATT-TAGTTC-ATCTCAAGCACCTGAGTACGTG 2440
Query 2464 CAT-CAAACCATCGCTGGATGTCTTGG-AGTTCCT-GAGAACAATGTGCGTGTCATCACT 2520
||| | |||||| |||||| || | | || ||| | || || || ||||| ||
Sbjct 2441 CATTCGGTT-ATCGCTACATGTCTCGGCA-T-CCAAGAGCATAACGTTCGAGTCATTACC 2497
Query 2521 AGAAGAGTTGGAGGCGGATTCGGTGGGAAAGCCGTGAAA-TCAATGCCTGTTGCTG-CAG 2578
|||||||||||||| || || ||||| ||||| || ||| |||||||||||||| | |||
Sbjct 2498 AGAAGAGTTGGAGGTGGCTTTGGTGGTAAAGCTGT-AAAGTCAATGCCTGTTGC-GACAG 2555
Query 2579 CTTGTGCACTT-G-CAGCATCCAAAATGCAGCGTCCTGTGAGGACATATGTGAACCGAAA 2636
| |||||| || | | |||| |||| |||| |||||||| | || ||| ||||||| ||
Sbjct 2556 CATGTGCA-TTAGGC-GCATACAAATTGCAACGTCCTGTTAAGATGTATCTGAACCGCAA 2613
Query 2637 AACGGATATGATAACTACC-GGAGGAAGACATCCGATGAAAGTCACATATAGTGTTGGAT 2695
|| |||||||||| | | |||||||| ||||| |||||| | || || | |||||| |
Sbjct 2614 CACCGATATGATAA-TGGCTGGAGGAAGGCATCCAATGAAAATAACTTACAATGTTGGTT 2672
Query 2696 TCAAATCCA-ATGGAAAGATTACTGCTTTAGATGT-AG-AGGTGTTACTTGATGCAGGG- 2751
| | ||| | |||| ||| | || || | || | | | || || | || ||||||
Sbjct 2673 TTAGATC-AGATGGGAAGCTCACAGCACTGGAACTTACCA--TGCTAATAGACGCAGGGC 2729
Query 2752 TTAA-CCGAAGATATAAGCCCGCTTATGCCGAAGGGAATACAA-GGAG-CA-CTAATGAA 2807
|| | ||| || |||| || | |||||| || |||| || || | | |||| |||
Sbjct 2730 TTGAGCCG--GACGTAAGTCCAATCATGCCGC-GG-AATATAATGG-GTCCGCTAAGGAA 2784
Query 2808 GTATGATTGGGGTGCTCTGTC-TTTCAATGTGAAAGTATGCAAAACAAACACTGT--GAG 2864
|||||||||||| ||| |||| ||| | || ||||| ||||| ||||| ||| |||
Sbjct 2785 GTATGATTGGGGAGCTTTGTCATTTGAC-GTAAAAGTGTGCAAGACAAAT--TGTCCGAG 2841
Query 2865 CAGAACCGCGCTGAGAGCTCCTGGGGATGTACAAGGATCATATATAG-GAGAAGCCATCA 2923
||||| ||| |||||||||| ||||| |||||||| || ||||| | | ||| | || |
Sbjct 2842 TAGAACGGCGATGAGAGCTCCCGGGGAAGTACAAGGTTCTTATATTGCG-GAATCTATTA 2900
Query 2924 TTGAAAAAGTAGCTTCATATCTTTCAGTTG-ATGTTGATGAGATCAGGAAGGTTAATCTT 2982
| || || ||||| || | |||| || || ||||||||| | | || ||| | || |||
Sbjct 2901 TCGAGAATGTAGCCTCTTCTCTT-CAAATGGATGTTGATGCGGTGAGAAAGATAAACCTT 2959
Query 2983 CATACATATGAGAGCTTAAGGTTGTT-TCACAGTGC-CAAAGCTGGTGAATTTTC-TGAG 3039
||||| ||||| ||| | || || | ||| || || ||||||| | || |||
Sbjct 2960 CATACTTATGACAGCCTCAGAAAATTCT-ACAA-GCACATTTCTGGTGA-TCTTGATGAA 3016
Query 3040 TATACGTTACCATTGCTT-TGGGACAGAATCG-ATGAGT-TCT-CGGGATTTAAC-AA-G 3093
||||| | || || || ||||||| ||| | | || | ||| || |||||| || |
Sbjct 3017 TATACACTGCCTTTA-TTATGGGACA-AATTGGA-GA-TATCTTCGAAATTTAAAGAAAG 3072
Query 3094 CGGAGGAAGGTGGTTGA-GGAGTTTAATGCAT-CAAACA-AGTGGAGAAAGAGAGGGATT 3150
| | | | | || || |||||||||| | | | ||| | ||| ||||||||||||||
Sbjct 3073 AGCTG-A-GATAGT-GAAGGAGTTTAAT-CTTTCTAACGTA-TGGCGAAAGAGAGGGATT 3127
Query 3151 TCACGTGTGCCTGCGGTTTATGCA-GTGAA-CATGCGATCAACACCGGG-AAGAGTAAGC 3207
|| || || ||| || || || || | || | | | || ||||| ||| ||||||
Sbjct 3128 TCTCGAGTACCTATTGTCCAT-CAAGTTATGCA-GAGGCCGACCCCGGGGAAG-GTAAGC 3184
Query 3208 GTTTTGGGAGATGGGTCAATAGTTGTGGAGGTTCAAGGGATTGAGATAGGACAAGGGCTT 3267
|||| | ||||| || | || || |||||| ||| ||||||||||| ||||| ||
Sbjct 3185 ATTTTAAGTGATGGTTCTGTTGTGGTTGAGGTTGGAGGAATTGAGATAGGGCAAGGA-TT 3243
Query 3268 -TGGAC-AAAGGTGA-AACAGATGGCTGCATAT 3297
||||| |||| | | ||||||||| ||| |||
Sbjct 3244 GTGGACCAAAG-T-ACAACAGATGGTTGCTTAT 3274
> Ahg323092 jgi|Araly1|323092|fgenesh1_pm.C_scaffold_5000636
Length=3957
Score = 281 bits (152), Expect = 2e-74
Identities = 868/1202 (72%), Gaps = 96/1202 (8%)
Strand=Plus/Plus
Query 1847 TTAC-AAAGGCTGGAGCTTGTCTCCAAGCATCTGGTGAGGCTGTTTATGTAGACGACATT 1905
|||| ||| |||||||||| || || || ||||| |||||||||||||| || || |||
Sbjct 1673 TTACTAAA-GCTGGAGCTTCCCTTCAGGCTTCTGGGGAGGCTGTTTATGTGGATGATATT 1731
Query 1906 CC-TGCTCCGGA-AAATTGTCTATACGGCGCATTTATTTACAGTACAATGCCGCTAGCGC 1963
|| | |||| | ||| || || || || ||||| || || || |||| ||| | || |
Sbjct 1732 CCAT-CTCC-CACAAACTGCCTCTATGGAGCATTCATCTATAGCACAAAGCCATTCGCAC 1789
Query 1964 GAATTAAGGGTA-TAAGGTTCAAGCAAAA--CAGAGTTCCAGA-AGGAGTTCTTGGCA-T 2018
| || || |||| | | |||||| |||| | | || || | |||||| || ||| |
Sbjct 1790 GGATAAAAGGTATTCA-TTTCAAGGAAAATTC-G-GTACC-TACTGGAGTTGTT-GCAGT 1844
Query 2019 TATTACTTACAAAGATATTCCCAAAGGCGGGCAA-AATATCGGTACCAACGGTTTCTTTA 2077
||| || ||| ||| |||| ||||| || || ||||| |||| || | | |||
Sbjct 1845 CATTTCTCGCAAGGATGTTCCTAAAGG-TGGAAAGAATATTGGTATGAA-GACTGGATTA 1902
Query 2078 -CCTCGGATCTTTTGTTCGCAGAAGAAGTCACTCATT-GTGCGGGTCAG-AT-AATCGCC 2133
||| |||| || |||||||| || |||| |||| || || | | || ||||||
Sbjct 1903 GGCTCCGATCAATTATTCGCAGAGGATTTCAC-CATTACTGTAGG-C-GAATGCATCGCC 1959
Query 2134 TTTTTGGTTGCAGATA-GTCAAAAG-CATGCAGATATTGCAGCAAATCTTGTTGTGA-TA 2190
|| ||||||| |||| | | | || ||||||||| |||||||||||||| || | |
Sbjct 1960 TTCGTGGTTGCTGATACG-C-AGAGACATGCAGATGCTGCAGCAAATCTTGCAGT-AGTT 2016
Query 2191 GATTACGACACCA-AAGATTTAAAACCACCTATAC-TGTCCT-TAGAAGAAGCTGTCGAA 2247
|| || || | || | ||||| || | || || | | | || ||||||| || ||| ||
Sbjct 2017 GAATATGA-AACAGAGGATTTGGAATCGCCGAT-CTTAT-CTGTAGAAGACGCGGTC-AA 2072
Query 2248 -AACTTTAGCCT-TTTCGAGGTCCCTCCACCTCTGCGTGGTTA--C-C--C-GGTTGGTG 2299
|| | ||| || ||| || | | | ||| | | | ||| | | | |||||||
Sbjct 2073 GAAATCTAGTCTGTTT-GACAT-TAT-C-CCT-TTC-T-TTTATCCACAACAAGTTGGTG 2125
Query 2300 ATATCA-CCAAGGGAATGGATGAAGCTGAACATAAG-ATTCTTGGATC-AAAGATAAGTT 2356
||| || | || ||||||| ||||||||| ||| | ||||| | || || || |
Sbjct 2126 ATA-CATCAAAAGGAATGGCTGAAGCTGATCAT-CGAATTCTCAGCTCGGAA-ATTCGAC 2182
Query 2357 TCGGGTCACAGTACTTCTTCTATATGGAGACACAAACAGCTCTTGCAGTGCCGGATGAAG 2416
||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 2183 TCGGGTCGCAATACTTCTTCTACATGGAGACACAAACAGCTCTTGCAGTGCCAGATGAAG 2242
Query 2417 ACAACTGTATGGTGGTTTATAGCTCGACTCAAACCCCTGAGTTTGTACA-TCAAACCATC 2475
||||||| || || || ||||| || ||||| | |||| | | ||||| || | ||
Sbjct 2243 ACAACTGCATTGTAGTCTATAGTTCAACTCAGAGCCCTCACTACGTACACTCCT-CGGTC 2301
Query 2476 GCTGGATGTCTTGG-AGTTCCTGAGAACAATGTGCGTGTCATCACTAGAAGAGTTGGAGG 2534
|||| || || || | | ||||| ||||| || |||||||| || ||| | ||||| ||
Sbjct 2302 GCTGCTTGCCTAGGCA-TCCCTGAAAACAACGTCCGTGTCATAACCAGACGTGTTGGTGG 2360
Query 2535 CGGATTCGGTGGGAAAGCCGTGAAATCAATGCCTGTTGCTGCAGCTTGTGCACTTGCAGC 2594
| || || || ||||| || || |||||||| ||||| |||| || || ||||| ||
Sbjct 2361 AGCTTTTGGAGGAAAAGCTGTCAAGTCAATGCCAGTTGCAACAGCGTGCGCTCTTGCTGC 2420
Query 2595 -A-TCCAAAATGCAGCGTCCTGTGAGGACATATGTGAACCGAAAAACGGATATGATAACT 2652
| | || ||||||||||||||||||| ||||| ||||| || || |||||||||| |
Sbjct 2421 TAATACAC--TGCAGCGTCCTGTGAGGACTTATGTAAACCGCAAGACCGATATGATAA-T 2477
Query 2653 -ACCGGAGGAAGACATCCGATGAA-AGTCACATATAGTGTTGGATTCAAATCCA-ATGGA 2709
|| || || || ||||||||||| | | || || ||||| || |||||||||| | |||
Sbjct 2478 GACTGGCGGGAGGCATCCGATGAAGA-TAACCTACAGTGTGGGTTTCAAATCCACAGGGA 2536
Query 2710 AAGATTACTGCTTTAGATG-TAGAGGTGTTACTTGATGCAGGGTTAAC-CGAAGATATAA 2767
| ||| || ||||| || | |||| | || ||||||||||| || | | ||||
Sbjct 2537 A-GATCACAGCTTTGGA-GCTAGAAATACTAATTGATGCAGGGGCAAGTCTTGGTTATA- 2593
Query 2768 GCCCGCTTATGCCGAAGGGAATA-CAA-GGAGCACTAATGAAGTATGATTGGGGTGCTCT 2825
| || |||| || | |||| || || || |||| |||||| |||||||||| ||
Sbjct 2594 GTACGTTTATTCC-ATCA-AATATCATTGGGGCGCTAAAGAAGTACAATTGGGGTGC-CT 2650
Query 2826 G-TCTTTCAATGTGAAAGTATGCAAAACAAACACTG-TGAGCAGAACCG-CGCTGAGAGC 2882
||||| || | ||| | || |||||||| || | |||||| | | ||||| |
Sbjct 2651 TATCTTTTGATATCAAACTTTGTAAAACAAAT-CTTCTAAGCAGAGCAATCA-TGAGATC 2708
Query 2883 TCCTGGGGATGTACAAGG-ATCATATATAGGAGAAGCCATCATTGAAAAAGTAGCTTCAT 2941
|| || ||||| || || | | ||||| | ||||||||||| ||||| ||||| || |
Sbjct 2709 CCCCGGAGATGTGCAGGGTA-CGTATATCGCTGAAGCCATCATCGAAAATGTAGCCTC-T 2766
Query 2942 ATCTT-TCAGTTG-ATGTTGATGAGA-TCAGGAAGGTTAATCTTCATACATATGAGAGCT 2998
| | | || ||| | |||||| | | | || ||| ||||||| ||||||||||||||||
Sbjct 2767 AGCCTCTCT-TTGGAGGTTGAT-ACAATAAGAAAGATTAATCTCCATACATATGAGAGCT 2824
Query 2999 TA 3000
||
Sbjct 2825 TA 2826
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169622602861
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5