BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G23150.1 Length=4926 Score E Sequences producing significant alignments: (Bits) Value Ahg489171 jgi|Araly1|489171|fgenesh2_kg.6__2305__AT5G23150.1 7239 0.0 Ahg487657 jgi|Araly1|487657|fgenesh2_kg.6__791__AT5G08230.1 837 0.0 > Ahg489171 jgi|Araly1|489171|fgenesh2_kg.6__2305__AT5G23150.1 Length=4889 Score = 7239 bits (3920), Expect = 0.0 Identities = 4605/4925 (94%), Gaps = 89/4925 (2%) Strand=Plus/Plus Query 53 CTTTCAGCCCTAACCCCATCGtctctc--t--ctcgcgaccgcctcatctctctctgtct 108 ||||| ||||||| ||||||||||||| | ||||||||||||||| |||||||||||| Sbjct 1 CTTTCTGCCCTAAGCCCATCGTCTCTCTATCCCTCGCGACCGCCTCACCTCTCTCTGTCT 60 Query 109 ggatcaatctcgctctctctttctctcGGCTACGTCGCTGTTTCTCGTTTCGTGATCCGT 168 |||||||||||||||| | | |||||| ||| |||| ||||| |||||| |||||||||| Sbjct 61 GGATCAATCTCGCTCT-T-TCTCTCTC-GCTCCGTCTCTGTTGCTCGTTACGTGATCCGT 117 Query 169 AGCTGTCTCCGCTACTACCTTAATCAGCGAGCTTCTTCCGGTGGAATAATCTTCGGATAG 228 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct 118 AGCTGTCTCCGCTACTACCTCAATCAGCGAGCTTCGTCCGGTGGAATTATCTTCGGAT-- 175 Query 229 GAGGAATCGGAGAATTCTTCTAATTGGGTGTCTGGGTTGGATTGGAATACGTAATTCTGT 288 ||||||||||| | ||||||||| || |||||||||||||||| |||||||||| || Sbjct 176 -AGGAATCGGAGGA---TTCTAATTGTGTCTCTGGGTTGGATTGGATTACGTAATTCGGT 231 Query 289 TGGGTGTTCCAATTTCGCGTTCAAAATTAGGGTTTATAGAGGTCTCGCCTATGGCTCCTG 348 ||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 232 TGGATGTTCCTATTTCGCGTTCAAAATTAGGGTTTATAGAGGTCTCGCGTATGGCTCATG 291 Query 349 GGCGTAAAAGAGGAGCGAGCAAGGCCAAAG-CCAAAGGGCAGTTGGTTCTCGGTGATCTG 407 |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct 292 GGCGTAAAAGAGGAGCGAGCAAGGCC-AAGACCAAAGGGCAGTTGATTCTCGGTGATCTG 350 Query 408 GTTCTCGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCCGGCCTGAAGAT 467 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 351 GTTCTTGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCCGGCCTGAAGAT 410 Query 468 TGGGATCGTGCGCCAGACCCAAAGAAGTACTTTGTTCAGTTCTTTGGAACAGAGGAAATA 527 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 411 TGGGATCGTGCGCTAGACCCAAAGAAGTACTTTGTTCAGTTCTTTGGAACAGAGGAAATA 470 Query 528 GCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAGAGCAAACTATTA 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 GCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAGAGCAAACTATTA 530 Query 588 GCAAGATGTCAAGGTAAAACTGTCAAGTACTTTGCACAAGCTGTAGAGCAAATCTGCACT 647 ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 531 GCAAGGTGTCAAGGTAAAACAGTCAAGTACTTTGCACAAGCTGTAGAGCAAATTTGCACT 590 Query 648 GCATTTGAAGGGTTGCAGAATCACAAGTCAAATGCTTTGGGCGATGAGGATTCTCTGGAT 707 |||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 591 GCATTTGAAGAGTTGCAGAATCACAAGTCAAATGTTTTGGGCGATGAGGATCCTCTGGAT 650 Query 708 GCTACTGAACCTGGTTTGACAAAGGCTGAGATAGTGGATGGAACAGATCATATTGTCATT 767 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 651 GCTGCTGAACCTGGTTTGACAAAGGCTGAGATAGAGGATGGAACAGATCATATTGTCATT 710 Query 768 GAGTCTGA-GAGAACTGATAACTTTAATTTTAGGGTGGATCCTTGCTTCCCCAAATTAGA 826 |||||||| | ||||| |||||||| ||| |||||||||||||||||| ||| | | Sbjct 711 GAGTCTGATG-GAACTAATAACTTTGATTCTAGGGTGGATCCTTGCTT-CCC----T--A 762 Query 827 TGAGAATAATGGTGAGGAGAGAAAGGCTGAGATAAGGAAGCTAGATTCATCTTCATTTCT 886 |||||| |||||| |||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct 763 --AGAATATTGGTGAAGAGACAAAGGCTGAGATATGGAAGCTAGATTCATCTCCATTTCT 820 Query 887 GGAATCAAAGGTCAAAACCACATCCCCTGTTAGCGAGTCACTGGAGCATAGTTCATTTGA 946 |||||||||| ||| |||||||| | ||| ||||||||||||||||||| |||||| ||| Sbjct 821 GGAATCAAAGATCACAACCACATTCTCTGGTAGCGAGTCACTGGAGCATGGTTCATATGA 880 Query 947 CCCTAAAATAAAGAAAGAAGATTTTGATAAAGGAACTGACGGTAGTGCTTGCAATGAACA 1006 ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 881 CCCTAGAATAAAGGAAGGAGATTTTGATAAAGGAACTGACGGTAGTGCTTGCATTGAACA 940 Query 1007 TTTTGGTAATGGCCAAAAGAAGCTGGCTAACGGTAAGAGAATTAAGAAGGAAGCAGGTGG 1066 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 941 TTTTGGTAATGGCCAAAAGAAGCTGGCCAACGGTAAGAGAATTAAGAAGGAAGCTGGTGG 1000 Query 1067 CTCTGATAGAAAAGGTGAAGATACAGTTCATCGAGACAAAAGCAATAACTCACATGTGCC 1126 |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 1001 CTCTGATATTAAAGGTGAAGATACAGTTCATAGAGACAGAAGCAATAACTCACATGTGCC 1060 Query 1127 TGGTGGTCGAACTGCCAGTGGTAACTCTGATTCCAAAAAATCGAAAGGTCTGTTGACAGA 1186 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 1061 CGGTGGTCGAACTGCCAGTGGTAACTCTGATTCCAAAAAGTTGAAAGGTCTGTTGACAGA 1120 Query 1187 GAAAACCAGCTCCAAAGTGTCTGCTGATAAGCATGAAAATTCACCTGGCATCAAGGTTGG 1246 |||| | ||||||||||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct 1121 GAAATCTAGCTCCAAAGTGTCTGCTGGCAAGCATGAAAATTCACCTGGCTTCAAGGGTGG 1180 Query 1247 GGTTTCCGGAAAGAAAAGGAGGCTTGAAAGTGAACAAGGTAAGCTTGCACCAAGAGTAGA 1306 ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| Sbjct 1181 GGTTTCCGGAAAGAAAAGGAGGCTTGAAAGTGAACTAGGAAAGGTTGCACCAAGAGTAGA 1240 Query 1307 TGAAAGCTCACGTGCTGCTAAAAAGCCGCGATGTGAAAGT---GCAGACAATAAAGTAAA 1363 |||||| ||||| ||||||||||||||||| ||||||||| |||||||| |||| ||| Sbjct 1241 TGAAAGTTCACGAGCTGCTAAAAAGCCGCGTTGTGAAAGTGCAGCAGACAAGAAAGAAAA 1300 Query 1364 GTGTGAAATTGATGATGGATCTGATTCTACTGGGACTGTATCAGATATTAAGCGTGAAAT 1423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1301 GTGTGAAATTGATGATGGATCTGATTCTACTGGGACTGTATCAGATATTAAGCGTGAAAT 1360 Query 1424 TGTTTTAGGATTAGGTGCTCGCGGTGGAAATTTTCAATATGATAAAGAAG-CAGTTGCAT 1482 ||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 1361 TGTTTTAGGATTAAGTGCTCGCGGTGGAAATTTACAATATGATAAAGAAGTC-GTTGCAT 1419 Query 1483 ATACAAAGCGCCAGAGACAGACAATGGAGCATGCTACCTCTCCTTCTTTTTCTGGGTCTC 1542 |||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct 1420 ATACAAAGCGCCGGAGACAAACAATGGAGCATGCCATCTCTCCTTCTTTTTCTGGGTCTC 1479 Query 1543 GTGATAAATCTGGGAAAGGTCATCTGGAACAGAAAGACCGTTCCTCTCCTGTTCGTAATG 1602 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1480 GTGATAAATCCGGGAAAGGTCATCTGGAACAGAAAGACCGTTCCTCTCCTGTTAGTAATG 1539 Query 1603 TTAAGGCTCCAGCTGCACAGTCGCTGAAAAAACGGAGGGCTGTTTGTATCTACGACGAAG 1662 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1540 TTAAGGCTCCAGCTGCACAGTCGCTGAAAAAACGGAGGGCTGTTTGTATCTATGACGAAG 1599 Query 1663 ATGATGATGAAGATCCAAAAACCCCATTACATGGAAAACCAGCCATTGTTCCCCAAGCAG 1722 |||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||| Sbjct 1600 ATGATGATGAAGATCCAAAAACTCCATTACATGGCAGACCAGCCATTGTTCCCAAAGCAG 1659 Query 1723 CATCTGTTTTGACTGATGGTCCTAAAAGGGCTAATGTGTGTCACAGTACTTCTACAAAAG 1782 |||| |||||| ||| |||||||||||| |||| | ||||||| ||||||||||| |||| Sbjct 1660 CATCAGTTTTGGCTGGTGGTCCTAAAAGTGCTACTCTGTGTCAAAGTACTTCTACCAAAG 1719 Query 1783 CTAAGATATCTGCTGGATCTACAGAGAGTACTGAAGTAAGAAAGTTCCCTCTGCGTAAAC 1842 |||||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||||| Sbjct 1720 GTAAGATGTCTGCTGGATCTACAGAGAATACTGAACTAAGGAAGTTCCCTCTGCGTAAAC 1779 Query 1843 ATTGTGAGGATGCATCACGTGTATTACCAAGCAATGCGGAGAATTCTACTAATAGCTTAC 1902 ||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||| Sbjct 1780 ATTGTGAGGATGCATCACGTGTATTACCAGGCAATGTGGAGAATTCGACTAACAGCTTAC 1839 Query 1903 CTGTGGTAAAACCCATTAATGAATTGCCGCCAAAGGATGTCAAACAGATCTTGCAATCTC 1962 | |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1840 CCACGGTAAAACCCATCAATGAATTGCCGCCAAAGGATGTCAAACAGATCTTGCGATCTC 1899 Query 1963 CGAAGATGTCCCCTCAGCTGGTTTTAACTAACAAGCACGTTGCAGGACAGCATAAAGTTG 2022 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 1900 CGAAGATGTCCCCCCAGCTGGTTTTAACTAACAAGCACGTTGCAGGACAGCATAAACTTT 1959 Query 2023 TAAAATCATCGGTGAAAGTTTCTGGTGTTGTGATGGCAAAGAAGCCTCAAAGTGATTCTT 2082 |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 1960 TAAAATCATCTGTGAAAGTTTCTGATGTTGTGATGGCAAAGAAGCCTCAGAGTGATTCTT 2019 Query 2083 GTAAGGAGGCGGTTGCGGGATCTGACAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATC 2142 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2020 GTAAGGAGACAGTTGCGGGATCTGATAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATC 2079 Query 2143 AGAGACACAAATCAGCTTCAGTTGGAGAGAGGCTAACAGTGGTTTCAAAAGCTGCATCAC 2202 ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 2080 AGAGACACAAAGCAGCTTCAGTTGGAGAGAGGCCAACAGTTGTTTCAAAAGCTGCATCAC 2139 Query 2203 GTTTGAATGACTCTGGTTCAAGAGACATGTCTGAGGACTTGTCTGCT-GCTATGCTTGAC 2261 ||||||||||||||||||| ||||||||||||| |||||| ||| || || |||||||| Sbjct 2140 GTTTGAATGACTCTGGTTCGAGAGACATGTCTGTGGACTTCTCTTCTGGC-ATGCTTGAT 2198 Query 2262 CTCAATAGAGAAAAGGGGAGTGCTACATTTACCAGTGCAAAGACCCCAGATTCGGCTGCA 2321 |||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2199 CTCAATCGAGAAAAGTGGAGTGCTCCATTTACCAGTGCAAAGACCCCAGATTCGGCTGCA 2258 Query 2322 TCTATGAAGGATCTAATTGCTGCTGCGCAGGCAAAAAGAAAACTTGCACATACACAAAAT 2381 |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| Sbjct 2259 TCTATGAAGGATCTAATTGCAGCTGCGCAGGCAAAAAGAAAACTCGCACATTCACAAAAC 2318 Query 2382 TCAATTTTTGGGAATTTGAACCCTAGTTTCTTGAGCATCAGTGATACACAGGGGAGGAGC 2441 |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2319 TCAATTTTCGGGAATTTGAACCCTAGTTTCTTGAGCATCAGTGATACACAGGTGAGGAGC 2378 Query 2442 CATAGCCCATTTATGGTTCAGAATGCTTCAGCTTCTGCTGCCATCTCAATGCCGTTAGTT 2501 ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| Sbjct 2379 CATAGCCCATTTATGGTTCAGGATGCTTCAGCTTCTGCTGCCATCACAATGCCATTAGTT 2438 Query 2502 GTTCAAGGTCATCATCAACAAGGTTCTTCTCCGTCAAATCATGGGCATCAGTCCTTATCA 2561 |||||||| | |||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 2439 GTTCAAGG--A-CATCAACAAGGTTCTTCTCCGTCAAATCATGGCCATCAGTCCTCATCA 2495 Query 2562 AGAAATCAGATTGAGACTGATGATAATGAAGAGAGAAGACTTAGTTCAGGGCATAAGTCA 2621 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2496 AGAAGTCAGATTGAGACTGATGATAATGAAGAGAGAAGACTTAGTTCAGGACATAAGTCA 2555 Query 2622 GTTGGAGGTTCACTTAGTTGTAGCACTGAGGCTGCTATTTCTCGGGATGCTTTTGAAGGC 2681 |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| Sbjct 2556 GTTGGAGGTTCACTTAGTGGTAGCACTGAGGCTGCTGTTTCCCGGGATGCTTTTGAAGGC 2615 Query 2682 ATGTTAGAGACCTTATCAAGAACCAGGGAAAGTATTGGACGTGCAACTCGCCTAGCAATT 2741 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2616 ATGCTAGAGACCTTATCAAGAACTAGGGAAAGTATTGGACGTGCAACTCGCCTAGCAATT 2675 Query 2742 GATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTGGAACTTCTCATACGAAAGTTGGAA 2801 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2676 GATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTGGAACTTCTCATACGAAAGTTGGAA 2735 Query 2802 AGTGAATCTCACTTCCATCGTAAAGTGGACTTGTTCTTTCTCGTCGACTCTATCACCCAG 2861 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2736 AGTGAATCTCACTTCCATCGTAAAGTGGACTTGTTCTTTCTCGTTGACTCTATCACCCAG 2795 Query 2862 CATTCGCACAGCCAAAAAGGTATTGCTGGTGCTTCTTACGTTCCTACTGTGCAAGCTGCT 2921 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2796 TATTCGCACAGCCAAAAAGGTATTGCTGGTGCTTCTTACGTTCCTACTGTGCAAGCTGCT 2855 Query 2922 TTGCCACGTCTTTTAGGTGCCGCTGCTCCTCCAGGGACTGGTGCTAGTGATAACCGTCGT 2981 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2856 TTGCCACGTCTTTTAGGTGCCGCTGCTCCTCCAGGGACTGGTGCTAGTGATAACCGCCGT 2915 Query 2982 AAATGTCTGAAGGTCCTGAAGTTGTGGCTTGAAAGGAAAGTTTTCCCTGAATCTCTTCTG 3041 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2916 AAATGTCTGAAGGTTCTGAAGTTGTGGCTTGAAAGGAAAGTTTTCCCTGAATCTCTTCTG 2975 Query 3042 CG-TCGTTATATTGATGATATTAGAGCTTCTGGTGATGATGCAACTGGTGGGTTTTCCCT 3100 || | |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct 2976 CGGT-GTTATATTGATGATATTAGAGCTTCTGGTGATGACGCAACTGTTGGATTTTCCCT 3034 Query 3101 GCGACGTCCTTCTAGATCTGAGCGTGCTGTAGATGATCCTATCAGGGAAATGGAAGGGAT 3160 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 3035 GCGACGTCCTTCTAGATCTGAGCGCGCTGTAGATGATCCTATCAGGGAAATGGAAGGGAT 3094 Query 3161 GCTTGTTGATGAGTATGGCAGCAATGCAACGTTTCAGCTGCCAGGGtttttttCATCTCA 3220 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 3095 GCTTGTTGATGAGTATGGCAGCAATGCAACATTTCAGCTGCCTGGGTTTTTTTCATCTCA 3154 Query 3221 TAATTTTGAAGATGATGAAGAAGATGACGATCTTCCAACATCACaaaaagaaaaaaGCAC 3280 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct 3155 TAATTTTGAAGATGATGAAGAAGATGACGATCTTCCAACGTCACAAAAAGCAAAAAGAAC 3214 Query 3281 ATCTGCGGGGGAACGTGTCAGTGCTTTAGACGACCTGGAAATACATGATACCTCGAGTGA 3340 |||||||||||| ||| ||| || |||||||||||||||||||||||||| |||||||| Sbjct 3215 ATCTGCGGGGGAGCGTTTCAATGTTTTAGACGACCTGGAAATACATGATATTTCGAGTGA 3274 Query 3341 TAAATGCCATCGAGTTTTGGAGGATGTCGATCATGAACTTGAAATGGAAGATGTATCAGG 3400 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || Sbjct 3275 TAAATGCCATCGAGTTTTGGAGGATGTAGATCATGAACTGGAAATGGAAGATGTATCTGG 3334 Query 3401 CCAGCGGAAAGATGTAGCACCTTCCTCTTT-CTGTGAGAATAAGACAAAGGAGCAATCAC 3459 |||||||||||||||||||||||||||||| | |||||||| ||||| | |||| |||| Sbjct 3335 CCAGCGGAAAGATGTAGCACCTTCCTCTTTGC-GTGAGAATGAGACA--G-AGCAGTCAC 3390 Query 3460 TGGATGTTATGGAACCTGTTGCAGAAAAATCAACCGAGTTCAATCCTCTTCCAGAGGATt 3519 |||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||| Sbjct 3391 TGGATGTTATGGAACCAGTTGCAGAAAAATTAACTGAGGTCAATCCTCTTCCAGAGGATT 3450 Query 3520 ctcctccgctacctcaggaatcacctccccct-ctccctcctctaccaccttctccccca 3578 |||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||| Sbjct 3451 CTCCTCCGCTACCTCACGAATCACCTCCATCTAC-CCCTCCTCTACCACCTTCTCCCCCA 3509 Query 3579 cctccatcccctcctc-tcc-c-GCCATCA-----TC--T--CTGCCACCACCGCCTCCC 3626 |||||||||||||||| ||| | | |||| || | |||||||||||||| ||| Sbjct 3510 CCTCCATCCCCTCCTCCTCCGCCGTCATCTCCGCCTCCATTACTGCCACCACCGCCCCCC 3569 Query 3627 GCAGCGCTGttcccacctctt-ccaccacctccgtctcagcctcctccaccaccac---t 3682 ||||||| |||||||||||| || ||||||| |||||||||||| |||||||| | | Sbjct 3570 GCAGCGCACTTCCCACCTCTTTCC-CCACCTCAGTCTCAGCCTCCACCACCACCGCCCCT 3628 Query 3683 ttcacctccaccttcaccgccgcctccacctccaccgccttcacAATC-AT---TAA--C 3736 ||||||||| |||||||||||||||||||||||||| ||||||||||| || | | Sbjct 3629 TTCACCTCCGCCTTCACCGCCGCCTCCACCTCCACCTCCTTCACAATCTATAGCTTTTTC 3688 Query 3737 A--A-C-T---CAACTC-----TCCATAGCTAGCCATCATCAGATACCATTTCAACCAGG 3784 | | | | |||||| ||||||||| |||| |||||| |||||||||||||||| Sbjct 3689 AGCATCATTAACAACTCAACAATCCATAGCTGGCCACCATCAGTTACCATTTCAACCAGG 3748 Query 3785 ATTTCCTCCCCCAACATATCCTTTATCGCATCAAACATACCCAGGATCTATGCAGCAAGA 3844 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3749 ATTTCCTCCCCCAGCATATCCTCTATCGCATCAAACATACCCAGGATCTATGCAGCAAGA 3808 Query 3845 CCGCTCTAGTATTTTCACCGGTGATCAAATTGTCCAGGGGCCTGGAAATTCTTCACGTGG 3904 ||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct 3809 CCGCTGTAGTATTTTCACTGGTGATCAAATTGTCCAAGGGCCTGGAAATTC---ACGTGG 3865 Query 3905 AGGTCTTGTTGAGGGCGCTGGAAAACCCGAATATTTTGTGCAGCAGTCCTCCAGTTTTTC 3964 | ||| ||||||||| |||||||||||||||||||||||||| ||||| || |||||||| Sbjct 3866 AAGTCATGTTGAGGGTGCTGGAAAACCCGAATATTTTGTGCAACAGTCATCTAGTTTTTC 3925 Query 3965 ACCAGCAGGAGTGTGCAGCTCCAGGGAGCCTTCATCATTTACTTCCTCCAGACAACTAGA 4024 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3926 ACCAGCAGGAGTGTGCAGCTCCAGGGAACCTTCATCATTTACTTCCTCCAGACAACTAGA 3985 Query 4025 ATTTGGGAACAGCGATGTACTTTTCAATCCTGAAGCTTCTTCACAGAACCATCGGTTTCA 4084 |||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 3986 ATTTGGGAGCAGCGATGTACTTTTTAATCCTGATGCTTCTTCACAGAACCATCGGTTTCA 4045 Query 4085 GCCGAGCACCCCTCTGTCCCAAAGACCTATGGTTAGGTTGCCTTCAGCACCGTCCAGTCA 4144 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 4046 GCCGAGCACCCCTCTATCCCAAAGACCTATGGTTAGGCTGCCTTCAGCACCGTCCAGTCA 4105 Query 4145 TTTTTCGTATCCAAGCCATATTCAATCACAATCTCAGCATTCCTACACTCATCCTTACCC 4204 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 4106 TTTTTCGTATCCAAGCCATGTTCAATCACAATCTCAGCATTCCTACACTCATCCTTACTC 4165 Query 4205 TTTCCCACCTCAACGTGATGATGCACGGCGATACAGAAATGAGGAACCATGGCGGATTCC 4264 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 4166 TTTCCCACCTCAACGTGATGATGGACGGCGATACAGAAATGAGGAACCATGGAGGATTCC 4225 Query 4265 TTCAAGTGGACATAGTGCAGAAAATCAGAATGGTGCCTGGATACATGGAAGAAATTCACA 4324 |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 4226 TTCAAGTGGAAATAGTGCAGAAAATCAGAGTGGTGCCTGGATACGTGGAAGAAATTCACA 4285 Query 4325 TCCAGGCCTTCCTAGAGTCACAGACAGTTTCTTTCGGCCACCTCCAGAACGTCCACCTTC 4384 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4286 TCCAGGCCTTCCTAGAGTCACAGATGGTTTCTTTCGGCCACCTCCAGAACGTCCACCTTC 4345 Query 4385 AGGGACAATGAACTATCAGCCTTCTGCTGCTAGTAACTTACAAGCTGTCCCTGCAATTCC 4444 |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 4346 AGGGACAATGAACTATCAACCTTCTGCTGCTAGTAACTTACAAGCTGCCCCTGCAATTCC 4405 Query 4445 AGGTCATACTGCTCCCCAGATGCTACCGTCTCGGCCAGATATACCTACCGTGAATTGTTG 4504 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4406 AGGTCATGCTGCTCCCCAGATGCTACCATCTCGGCCAGATATACCTACCGTGAATTGTTG 4465 Query 4505 GAGGCCAGCTTGAAGTGAAGGTAGAATTTTGTTGGCCTGCTCCTGTTAGTATCAATGGAA 4564 ||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 4466 GAGACCAGCTTGAAGTGAATGTAAAATTTTGTTGGCCTGCTCCTGTTAGTATCAATGGAA 4525 Query 4565 AAGAAGCTGCTAGTGTCTCATTAACAAGGTTAATCCTCTAGGTTTGGTTTTCTAAATACT 4624 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 4526 AAGAAGCTGCTAGTGTCTCATTAACAAGGTTAATCCTCTAGGTTTGATTTTCTAAATACT 4585 Query 4625 AAAGTCAAGTCTTTTATCAGTGTTGTCATCAAACAGTTACAGTTATACTACTTTCTCTTC 4684 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 4586 AAAGTCAAGTCTTTTATCAGTGTTGTCATCAGACAGTTACAGTTATACTACTTTCTCTTC 4645 Query 4685 CATGGAGGCCTTTTTCGGATATATCCACTTCCAGAGGCACAAAAACTACTGCAGGCTTTT 4744 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4646 CATGGAGGACTTTTTCGGATATATCCACTTCCAGAGGCACAAAAACTACTGCAGGCTTTT 4705 Query 4745 GCCAGGATTCTGTATATTGTAtttttttCCTGACAAATGTATCTGTGGATCATATTCTTA 4804 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4706 GCCAGGATTCTGTATATTGTATTTTTT-CCTGACAAATGTATCTGTGGATCATATTCTTA 4764 Query 4805 ACAGTATAGGTTC-t-tttttt-ATTGGTTAGTACTTCAGTTCCTGTAATTATGCCAATC 4861 ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 4765 ACAGTATAGGTTCCTGTTTTTTTATTGGTTAGTACTTCAGTTCCTGTAATTATGCCAATC 4824 Query 4862 ACAATTTGCTCAAAGCTTTTACTGGAATGA--TTTGATCTTCATAGTCAAACATAGtttt 4919 ||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 4825 ACAATGTGCTCAAAGCTTTTACTGGAATGAAATTTGAACTTCATAGTCAAACATAGTGTT 4884 Query 4920 ttttt 4924 ||||| Sbjct 4885 TTTTT 4889 > Ahg487657 jgi|Araly1|487657|fgenesh2_kg.6__791__AT5G08230.1 Length=4402 Score = 837 bits (453), Expect = 0.0 Identities = 1091/1389 (79%), Gaps = 84/1389 (6%) Strand=Plus/Plus Query 1906 TGGTAAAACCCATTAATGAA-TTGCCGCCAAAGGATGTCAAACAGATCTTGCA-ATCTCC 1963 ||| |||| ||| | || || || || ||| || ||||||| ||||||||| | |||||| Sbjct 1736 TGGGAAAA-CCAGTCATCAAGTTACCTCCACAGAATGTCAAGCAGATCTTG-AGATCTCC 1793 Query 1964 GAAGATGTCCCCTCAGCTGGTTTT-AACTAACAAGCACGTTGCAGGACAGCATAAAGTTG 2022 |||| |||||||||| | ||||| |||||| ||| || ||||||||| || Sbjct 1794 TAAGAAGTCCCCTCAG-TTGTTTTCAACTAAGGAGCTGGTGGCAGGACAG----AA---- 1844 Query 2023 TAAAATCATCGGTGAAAGTTTCTGGTGTTGTGATGGCAAAGAAGCCTCAAAGTGATTCTT 2082 |||||| | | ||||| ||||||| | |||| |||| || |||| ||||||||| Sbjct 1845 TAAAAT--T--GCAAAAGTCTCTGGTGCGGGGATGCCAAAAAAATATCAAGGTGATTCTT 1900 Query 2083 GTAAGGAGGCGGTTGCGGGATCTGACAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATC 2142 ||||| || || || || ||||| | | ||||||||||||| |||||| ||||||||| Sbjct 1901 CCAAGGACGCAGTGGCTGGTTCTGATAGAGTAAGCTCTTCTCATTCTCAGACAGCAAATC 1960 Query 2143 AGAGACA-CAAATCAGCTTCAGTTGGAGAGAGGCTAACAGTG-GTTTCAAAAGCTGC-A- 2198 ||||| | |||| |||||| |||| || | || ||||| | | | |||| ||| | Sbjct 1961 AGAGA-AGCAAACCAGCTT---TTGGGGAAAAGCCAACAG-GCACTCCGAAAGTTGCAAC 2015 Query 2199 T--CA--CGTTTGAATGACT-CTG--GT-TCAAGAGACA-TGTCTGAGGACTTGTCTGCT 2249 | || ||| || | || | || || ||||| |||| | |||| | ||||||||||| Sbjct 2016 TCGCAGTCGTCTGGACGA-TGTTGAAGTGTCAAGGGACACT-TCTGTGAACTTGTCTGCT 2073 Query 2250 G-CTATGCTTGACCTCAAT-AGAGAAAAGGGGAGTGCTACATTTACCAGTGCAAAGACCC 2307 | | || |||| ||||| | |||||| || ||||| |||| | |||| || | Sbjct 2074 GAC-GTGATTGATGTCAATCA-AGAAAATGGAAGTGCCCCATTGATCAGTTTTGGGATGC 2131 Query 2308 CAGATTCGGC-TGCATCTATGAAGGATCTAATTGCTGCTGCGCAGGCAAAAAGAAAACTT 2366 |||||| | | |||||||||||||||||||||| ||||| || ||||||||||||| Sbjct 2132 GAGATTCTTCAT-CATCTATGAAGGATCTAATTGCAGCTGCCCAAGCAAAAAGAAAACAA 2190 Query 2367 GCACATACACAAAATTCAATTTTTGGGAAT-TTGAACCCTAGTT-TCTTGAGCATCAGTG 2424 |||||| |||| | |||| |||| |||| | | ||| || || ||| | |||| | Sbjct 2191 GCACATTCACATACTTCACCGTTTGTGAATCTAG-ACCATAATTCCCTT-ACCATC---G 2245 Query 2425 ATACACAGGGGAG--GAGCCATAGCCCATTT-ATGGTTCAGAATGCTTCAGCTTCTGCT- 2480 || || | | || |||||| ||||| ||| |||||||| |||| |||| ||||| || Sbjct 2246 ATTCA-A-TGCAGTCGAGCCAAAGCCC-TTTCATGGTTCAAAATGTTTCATCTTCTACTG 2302 Query 2481 GCCATCTCAATGCCG-TTAGTTGTTCAAGGTCATCATCAACAAGGTTCTTCTCCGTCAAA 2539 || || | |||| | || |||| || ||| | |||||| ||| ||| ||| |||||| Sbjct 2303 GCGAT-GCCATGCTGATT-GTTGCTC-AGG--AACATCAAGAAGATTCGACTCTGTCAAA 2357 Query 2540 TCATGGGCATCAGTCCTTATCAAGAAATC-AGATTGAGACTGATGATAATGAAGAGAGAA 2598 |||||| | ||||||| |||||| | | || || |||||| || ||||||||||||| Sbjct 2358 TCATGGCCGCCAGTCCTCATCAAGTAGCCAAG-CTGGGACTGAAGAGAATGAAGAGAGAA 2416 Query 2599 GACTTAGTTCAGGGCATAAGTCAGTTGGAGGTTCACTTAGTTGTAG-CACTGAGGCTGCT 2657 | ||||||||||||||| ||||| ||| |||||||| ||| || | |||||||||||| Sbjct 2417 GGTTTAGTTCAGGGCATAGGTCAGGTGGTGGTTCACTGAGTGGT-GCCACTGAGGCTGCG 2475 Query 2658 ATTTCTCGGGATGCTTTTGAAGGCATGTTAGAGACCTTATCAAGAACCAGGGAAAGTATT 2717 || |||| ||| ||||||| || ||| ||||||| ||||| ||||| | |||||||||| Sbjct 2476 ATAACTCGAGATACTTTTGAGGGAATGATAGAGACTTTATCCAGAACTAAGGAAAGTATT 2535 Query 2718 GGACGTGCAACTCGCCTAGCAATTGATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTG 2777 |||||||||| ||||| |||||||||||||||||||||||| |||| |||||||| ||| Sbjct 2536 AGACGTGCAACACGCCTGGCAATTGATTGTGCCAAGTATGGGATTGCCAGTGAGGTTGTG 2595 Query 2778 GAACTTCTCATACGAAAGTTGGAAAGTGAATCTCA-CTTCCATCGTAAAGTGGACTTGTT 2836 ||||||||||| ||||||||||||| ||| |||| |||| || ||||||||| |||| Sbjct 2596 GAACTTCTCATTCGAAAGTTGGAAATTGAGCCTCATTTTCC-CCGAAAAGTGGACCTGTT 2654 Query 2837 CTTTC-TCGTCGACTCTATCACCCAGCATTCGCACAGCCAAAAAGGTATTGCTGG-TGCT 2894 ||||| || | || || |||| |||| ||| || ||||||||||||| || || | || Sbjct 2655 CTTTCTTC-TTGATTCGATCATCCAGTGTTCCCATAGCCAAAAAGGTAGAGCCGGCT-CT 2712 Query 2895 TCTTACGTTCCTACTGTGCAAGCTG-CTTTGCCACGTCTTTTAGGTGCCGCTGCTCCTCC 2953 || || |||||||||| || || | | || || || ||| ||||||| ||||||||||| Sbjct 2713 TCATATATTCCTACTGTTCAGGCAGCCCTT-CCGCGCCTTCTAGGTGCTGCTGCTCCTCC 2771 Query 2954 AGGGACTGGTGCTAGTGATAACCGTCGTAAATGTCTG-AAGGTCCTGAAGTTGTGGCTTG 3012 ||||||||||||| |||| || |||| | |||||| | ||||| ||| |||||||||| Sbjct 2772 AGGGACTGGTGCTCGTGAAAATCGTCATCAATGTC-GCAAGGTGTTGAGGTTGTGGCTTA 2830 Query 3013 AAAGGAAAG-TTTTCCCTGAATCTCTTCTGCGTCGTTATATTGATGATATTAGAGCTTCT 3071 ||||| ||| ||||||| || |||||| ||||||||||||||| |||| || | |||||| Sbjct 2831 AAAGG-AAGATTTTCCCAGATTCTCTTTTGCGTCGTTATATTGGTGATCTTGGTGCTTCT 2889 Query 3072 GGTGATGATGCAACTGGTGGGTTTTCCCTGCGACGTCCTTCTAGATCTGAGCGTGCTGTA 3131 ||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct 2890 GGTGATGATAAAACCGTTGGGTTTTCCCTACGACGTCCTTCTAGATCTGAGCGTGCTGTA 2949 Query 3132 GATGATCCTAT-CAGGGAAATGGAAGGGATGCTTGTTGATGAGTATGGCAGCAATGCAAC 3190 ||||||||| | | |||| ||||||||||||||||| || |||||||| |||||||||| Sbjct 2950 GATGATCCTCTAC-GGGACATGGAAGGGATGCTTGTCGACGAGTATGGGAGCAATGCAA- 3007 Query 3191 GTTT-CAGCTGCCAGGGtttttttCATCTCATAATTTTGAAGATGATGAAGAAGATGACG 3249 |||| |||||||| |||| ||| || ||||| | ||||| |||||||||||||||||| | Sbjct 3008 GTTTTCAGCTGCCGGGGTATTTATCTTCTCACACTTTTGGAGATGATGAAGAAGATGAGG 3067 Query 3250 ATCTTCCAA 3258 ||||||||| Sbjct 3068 ATCTTCCAA 3076 Score = 416 bits (225), Expect = 7e-115 Identities = 538/682 (79%), Gaps = 50/682 (7%) Strand=Plus/Plus Query 339 ATGGCTCCTGGGCGTAAAAGAGGAGCGAGCAAGGCCAAAGCCAAAGG-GCAGTTG-GTTC 396 |||||||||||||||||||||||||||| ||| |||| |||| ||| || | || | | Sbjct 1 ATGGCTCCTGGGCGTAAAAGAGGAGCGAACAAAGCCATGGCCATAGGAGC-GCTGAGAT- 58 Query 397 TCGGTGATCTGGTTCTCGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCC 456 | |||||||| ||||| || ||||||||||||||||||||||||||||| |||||| ||| Sbjct 59 TGGGTGATCTCGTTCTTGCTAAAGTCAAAGGCTTCCCTGCTTGGCCTGCTAAGATCGGCC 118 Query 457 GGCCTGAAGATTGGGATCGTGCGCCAGACCCAAAGAAGTACTTTGTTCAGTTCTTT-GGA 515 ||||||||||||| ||| || |||||||||||||| ||||||||||||| ||| ||| Sbjct 119 AGCCTGAAGATTGGAATCAAGCTCCAGACCCAAAGAAACACTTTGTTCAGTT-TTTCGGA 177 Query 516 ACAGAGGAAATAGCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAG 575 ||| ||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||| Sbjct 178 ACACAGGAAATAGGTTTTGTTGCGCCACCTGATATTCAACCCTTCACTAGCGAGGCAAAG 237 Query 576 AGCAAACTATTAGCAAGATGTCAAGGTAAAACTGTCAAGTACTTTGCACAAGCTGTAGAG 635 | ||||||||||||||||||||||||||||| | |||||||||| ||||||| || ||| Sbjct 238 AATAAACTATTAGCAAGATGTCAAGGTAAAACAGCCAAGTACTTTTCACAAGCCGTGGAG 297 Query 636 CAAATCTGCA-CTGCATTTGAAGGGTTGCAGAATCACAAGTCAAATGCTT-TGGGCGATG 693 |||||| | |||||||||||| || |||||||||||||||| || | | || ||| Sbjct 298 GAAATCT-CTGCTGCATTTGAAGAGTCGCAGAATCACAAGTCAGATA-TAGTAGGTAATG 355 Query 694 AGGATTCTCTGGA-TGCTACTGAACCTGGTTTGACAAAGGCTGAGATAGTGGATGGAACA 752 ||| | || | || |||| ||||||| || |||| ||| || ||||| || || || Sbjct 356 AGGCT-CTTTTGAATGCTGTTGAACCTAGTGTGACGAAGCCTAAGATATTGAATC-AA-- 411 Query 753 GATCATATTGTCATTGAGTCTGAGAGAA-CTGATAACTTTAATTTTAGGGTGGATCCTTG 811 | | || || | ||| | || | || ||||||| ||| | | ||||| ||||||||| Sbjct 412 G--C-TA--GT-AGTGA-TG-GA-A-AATCTGATAAGTTTGACTCTAGGGCGGATCCTTG 461 Query 812 -CTTCCCCAAATTAGATGAGAATAATGGTG-AGGAGAGAAAGGCTGAGATAAGGA-AGCT 868 ||| ||||||| |||||||||||||| || ||| |||| |||| ||| ||| | | Sbjct 462 TCTTGGT-AAATTAGTTGAGAATAATGGTGCAG-AGAAAAAGCCTGATATA-GGAGATC- 517 Query 869 AGATTCATCTTCATTTCTGGAATCAAAGGTCAAAACCACATCCCCT-GTTAGCGAGTCAC 927 ||| |||| || | | ||||||| || |||||||||||| || || ||| || Sbjct 518 AGA---ATCT--AT--C-GAAATCAAATAACAGAACCACATCCCCAAGT-AGTGAGCCAT 568 Query 928 TGGAGCATAGTTCATTTGACCCTAAAATAAAGAAAGAAGATT-TTGATAAAGGAACTGAC 986 |||||||| | ||| |||||||| ||| | || || || |||||||| | |||| Sbjct 569 TGGAGCATGGATCACCTGACCCTATTTTAATGGTAGCAG-TTGTTGATAAA--AT-TGAC 624 Query 987 GGTAGTG-CTTGCAATGAACAT 1007 ||| || |||||| ||| ||| Sbjct 625 GGT-GTCACTTGCACTGACCAT 645 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 186444050127 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5