BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G24050.1 Length=1050 Score E Sequences producing significant alignments: (Bits) Value Ahg930567 jgi|Araly1|930567|scaffold_303024.1 1338 0.0 Ahg905663 jgi|Araly1|905663|Al_scaffold_0003_2791 1336 0.0 Ahg480001 jgi|Araly1|480001|fgenesh2_kg.3__2702__AT3G24850.1 902 0.0 Ahg497170 jgi|Araly1|497170|fgenesh2_kg.26__5__AT5G24050.1 616 1e-175 Ahg930645 jgi|Araly1|930645|scaffold_303102.1 614 5e-175 Ahg930646 jgi|Araly1|930646|scaffold_303103.1 255 3e-67 Ahg930632 jgi|Araly1|930632|scaffold_303089.1 182 6e-45 Ahg887802 jgi|Araly1|887802|Al_scaffold_0123_3 86.1 5e-16 > Ahg930567 jgi|Araly1|930567|scaffold_303024.1 Length=1079 Score = 1338 bits (724), Expect = 0.0 Identities = 954/1060 (90%), Gaps = 35/1060 (3%) Strand=Plus/Plus Query 1 ATGACTAGTATCTATCACGATGATGAC-GATCATCTCACGGCTTCAGGTAAAGACCTGTG 59 ||||||||| | |||||| | || | |||||||||||||||||||| || |||||||| Sbjct 21 ATGACTAGTCTGTATCAC-A--AT-TCTGATCATCTCACGGCTTCAGGGAAGGACCTGTG 76 Query 60 GTCGAATTTCTGTGTACTGGTTGATGCGGCGGTTATGTTATATgaagaagaagaagaaga 119 || ||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 77 GTTGAATTTCTGTGTACTGGTTGATGCGGCAGTTATGTTATAT---------GAAGAAGA 127 Query 120 acaacgtcgtaagattgtctctgaagaagaagaagaattc-cagaagagaaTCTTTTGTC 178 ||||||||||||||||||||| ||||||||||||| | | ||| ||||||||||||||| Sbjct 128 ACAACGTCGTAAGATTGTCTCCGAAGAAGAAGAAG-AGGCACAGCAGAGAATCTTTTGTC 186 Query 179 TCTTCCCGAGAAAAACAAGATCGTCTTTGGTGAAGAGACAACAAAATCTTATTAGGG--- 235 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| Sbjct 187 TCTTCCCGAGAAAAACAAGATCGTCTTTGGTGAAGAGACAACAAAAGCTTAATGGGGTTT 246 Query 236 -T--TTCTACTTCTTCATCGCTTATCGATCTTAACCAGTTCCCTACCGATTCTGAGATCG 292 | |||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 247 CTACTTCTACTTCTTCATCGCTTATCGATCTTAACCAGTTCCCTACTGATTCTGAGA-C- 304 Query 293 AAGACCCACAAAACCATCTTCAAG-GGCTATCCTCTTCATGTTTCATTGCCGCTAATTCC 351 ||| |||||||||||||| || |||||| ||||||||||||| | |||| ||||| Sbjct 305 -AGA---ACAAAACCATCTTC-AGTTGCTATCTTCTTCATGTTTCA-T--CGCTGATTCC 356 Query 352 GAGACAAAAACATTACAAAACCCTAGTTCAGAACCTTGTTCTTCACTCGGACTCTTTGGT 411 |||| ||||| |||||||||||||||| ||| ||||||||||||||| |||||||| | Sbjct 357 GAGATGAAAACCCTACAAAACCCTAGTTCTGAATCTTGTTCTTCACTCGTACTCTTTGAT 416 Query 412 CACAAGACGGCTGAGTACC-AAAAGACGGAGACGAAAGACCCACCAAACCCTAATTTCCC 470 ||||||||||||||| || | |||||||||||||||||||||| ||||| ||||||||| Sbjct 417 TACAAGACGGCTGAGT-CCGAGAAGACGGAGACGAAAGACCCACTAAACCGTAATTTCCC 475 Query 471 ATGTACTATGTCTTTGTGCCTAATGGAGAACACAAGCCGCAAGAGACGTGCTGTGGAACA 530 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 476 ATGTTCTATGTCTTTGTGCCTAACGGAGAACACAAGCCGCAAGAGACGTGCTGTGGAACA 535 Query 531 AAGGAAGCGTAGTGGTGGAGTCAAGAAAGCAAATGTTGCTCCTTTTTCACAAACGGCGAG 590 ||||| ||| ||||||||||||||||||||| |||||| || |||| |||||| Sbjct 536 GAGGAAACGTTCTGGTGGAGTCAAGAAAGCAAAGGTTGCTTGTTCTTCAGGGACGGCGCC 595 Query 591 AGAGACACCTGAGTGGCTTGTCAAGGTGATGACAAACATGAAAGAAGCCAAAGACGCTAA 650 |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct 596 AGAGACACCTGAGTGGCTTGTCAAGGTGATGAGAGACATGAAAGAAGCTAAAGACGCTAA 655 Query 651 ATTGATCTTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACAAAGAACCGTCTCTC 710 | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 656 ACTGATCTTTGAGAAGACACTGTTCGTGACTGATGTAAACCCAACACAGAACCGTCTCTC 715 Query 711 AATGCCTTTCAACAACTTACTCCGAAACGATTTCCTGACGTCTGTGGAGTCCATAATCAT 770 |||||||||||||||||||||||| |||||||| |||| | || ||||||| |||||| Sbjct 716 AATGCCTTTCAACAACTTACTCCGCAACGATTTTTTGACACCAGTAGAGTCCAGAATCAT 775 Query 771 AAACGAAGACATCAACAACAATAACAAGATTGGAGTGGGAGCGATTCTCGTGGATCAACG 830 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 776 AAACGAAGACATCAACAACAATAAGAAGATTGGAGTGGGAGCGATTCTCGTTGATCAACG 835 Query 831 GTGTAAAAAGTGGGGTGTGATGTTAAAGAGATGGGAGATGAAGAAGGAATCAGGTAAAGG 890 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 836 GTGTGAAAAGTGGGGTGTGATGTTGAAGAGATGGGAGATGAAGAAGGAATCAGGTAAAGG 895 Query 891 AAGCTGGAGTTACAATTTGATTTGTGGGTGGAACGACATCGTTGAGGCTAACAGATTGAA 950 |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 896 AAGCTGGAATTACAATTTGATTTGTGGGTGGAACGATATCGTTGAGGCTAATGGATTGAA 955 Query 951 AGAAGGCGACAACATTACTCTTTGGTCGTTTAGGTGCTGTGGAATCCTCTGCTTTGCCAT 1010 ||| ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct 956 AGAGGGCGACAACATTAGTCTTTGGTCGTTTAGGTGCTGTGAAATCCTTTGCTTTGCCAT 1015 Query 1011 GGAACAGAGTAGCTCTTCCCTTGCTCTCTGTCTCTGCTAA 1050 |||||||||||||||||||||||||||||||||||||||| Sbjct 1016 GGAACAGAGTAGCTCTTCCCTTGCTCTCTGTCTCTGCTAA 1055 > Ahg905663 jgi|Araly1|905663|Al_scaffold_0003_2791 Length=1038 Score = 1336 bits (723), Expect = 0.0 Identities = 956/1063 (90%), Gaps = 38/1063 (4%) Strand=Plus/Plus Query 1 ATGACTAGTATCTATCACGATGATGACGATCATCTCACGGCTTCAGGTAAAG-ACCTGTG 59 |||| || ||| ||||||||| | |||||||||||||||||||||| ||| ||||||| Sbjct 1 ATGAATATTATGTATCACGAT--T-ACGATCATCTCACGGCTTCAGG-GAAGAACCTGTG 56 Query 60 GTCGAATTTCTGTGTACTGGTTGATGCGGCGGTTATGTTATATgaagaagaagaagaaga 119 ||||||||||| ||||||||||||||||||||| ||||||||| |||||| | Sbjct 57 GTCGAATTTCTTTGTACTGGTTGATGCGGCGGTAATGTTATAT---------GAAGAACA 107 Query 120 acaacgtc-gtaagattgtctctgaagaagaagaagaattc-cagaagagaaTCTTTTGT 177 |||||| | ||||||||||||| ||||||||||||| | | |||||||||||||||||| Sbjct 108 ACAACG-CAGTAAGATTGTCTCCGAAGAAGAAGAAG-AGACACAGAAGAGAATCTTTTGT 165 Query 178 CTCTTCCCGAGAAAAACAAGATCGTCTTTGGTGAAGAGACAACAAAATCTTATTAGGGTT 237 ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 166 CTCTTCCCGAGAAAAACAAGATCGTCTTTGGTGAAGAGACAACAAAAGCTTAAT-GGGTT 224 Query 238 T----CT---ACTTCTTCATCGCTTATCGATCTTAACCAGTTCCCTACCGATTCTGAGAT 290 | || |||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 225 TTTAACTTCTACTTCTTCATCGTTTATCGATCTTAACCAGTTCCCTACTGATTCTGAGA- 283 Query 291 CGAAGACCCACAAAACCATCTTCAAGG--GCTATCCTCTTCATGTTTCATTGCCGCTAAT 348 | | || |||||||||||||| || |||||| |||||||||||||| ||||| || Sbjct 284 C-A-GA---ACAAAACCATCTTC--GGTTGCTATCTTCTTCATGTTTCATCCCCGCTGAT 336 Query 349 TCCGAGACAAAAACATTACAAAACCCTAGTTCAGAACCTTGTTCTTCACTCGGACTCTTT 408 |||||||| ||||| |||||||||||||||| ||||||||||||||||||| | ||||| Sbjct 337 TCCGAGACGAAAACCCTACAAAACCCTAGTTCTGAACCTTGTTCTTCACTCGTAGTCTTT 396 Query 409 GGTCACAAGACGGCTGAGTACCAAA-AGACGGAGACGAAAGACCCACCAAACCCTAATTT 467 | | |||||| |||||||| || | ||| |||||||||||||||| |||||||||||| Sbjct 397 GATTACAAGATGGCTGAGT-CCGAGGAGAGGGAGACGAAAGACCCAGTAAACCCTAATTT 455 Query 468 CCCATGTACTATGTCTTTGTGCCTAATGGAGAACACAAGCCGCAAGAGACGTGCTGTGGA 527 | |||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 456 TCAATGTTCTTTGTCTTTGTGCCTAACGGAGAACACAAGCCGCAAGAGACGTGCTGTGGA 515 Query 528 ACAAAGGAAGCGTAGTGGTGGAGTCAAGAAAGCAAATGTTGCTCCTTTTTCACAAACGGC 587 ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 516 ACAGAGGAAGCGTACTGGTGGAGTCAAGAAAGCAAAGGTTGCTCCTTTTTCACAAACGGC 575 Query 588 GAGAGAGACACCTGAGTGGCTTGTCAAGGTGATGACAAACATGAAAGAAGCCAAAGACGC 647 ||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 576 GAGAGAGGCGCCTGAGTGGCTTGTCAAGGTGATGAGAGACATGAAAGAAGCCAAAGACGC 635 Query 648 TAAATTGATCTTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACAAAGAACCGTCT 707 |||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 636 TAAACTGATCTTTGAGAAGACTCTGTTCGTGACTGATGTGAACCCAACACAGAACCGTCT 695 Query 708 CTCAATGCCTTTCAACAACTTACTCCGAAACGATTTCCTGACGTCTGTGGAGTCCATAAT 767 |||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||| ||| Sbjct 696 CTCAATGCCTTTCAACAACTTAATCCGGAACGATTTCTTGACCTCTGTGGAGTCCAGAAT 755 Query 768 CATAAACGAAGACATCAACAACAATAACAAGATTGGAGTGGGAGCGATTCTCGTGGATCA 827 |||| || |||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 756 CATAGACAAAGACATCAACAACGATAAGAAGATTGGAGTGGGAGCGATTCTCGTGGATCA 815 Query 828 ACGGTGTAAAAAGTGGGGTGTGATGTTAAAGAGATGGGAGATGAAGAAGGAATCAGGTAA 887 ||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 816 ACGGTCTGAGAAGTGGGGTGTGATGTTGAAGAGATGGGAGATGAAGAAGGAATCAGGAAA 875 Query 888 AGGAAGCTGGAGTTACAATTTGATTTGTGGGTGGAACGACATCGTTGAGGCTAACAGATT 947 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 876 AGGAAGCTGGAATTACAATTTGATTTGTGGGTGGAACGATATCGTTGAGGCTAACGGATT 935 Query 948 GAAAGAAGGCGACAACATTACTCTTTGGTCGTTTAGGTGCTGTGGAATCCTCTGCTTTGC 1007 ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 936 GAAAGCCGGCGACAACATTAGTCTTTGGTCGTTTAGGTGCTGTGGAGTCCTCTGCTTTGC 995 Query 1008 CATGGAACAGAGTAGCTCTTCCCTTGCTCTCTGTCTCTGCTAA 1050 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 996 CATGGAACAGAGTAGCTCTTCTCTTGCTCTCTGTCTCTGCTAA 1038 > Ahg480001 jgi|Araly1|480001|fgenesh2_kg.3__2702__AT3G24850.1 Length=817 Score = 902 bits (488), Expect = 0.0 Identities = 632/699 (90%), Gaps = 19/699 (3%) Strand=Plus/Plus Query 352 GAGACAAAAACATTACAAAACCCTAGTTCAGAACCTTGTTCTTCACTCGGACTCTTTGGT 411 ||||| |||||| |||||||||||||||| ||| ||||||||||||||| |||||||| | Sbjct 136 GAGACGAAAACACTACAAAACCCTAGTTCTGAATCTTGTTCTTCACTCGTACTCTTTGAT 195 Query 412 CACAAGACGGCTGAGTACC-AAAAGACGGAGACGAAAGACCCACCAAACCCTAATTTCCC 470 |||||| |||||||| || | ||||| ||||||||||| | || | |||| ||| Sbjct 196 TACAAGATGGCTGAGT-CCGAGAAGACAGAGACGAAAGA--C-CC--A--CTAA--ACCC 245 Query 471 ATGTACTATGTCTTTGTGCCTAAT-GGAGAACACAAGCCGCAAGAGACGTGCTGTGGAAC 529 | | |||||||| |||| || ||||||||||||||||||||||||||| || || Sbjct 246 ---T-C--TGTCTTTGGGCCT-ATCGGAGAACACAAGCCGCAAGAGACGTGCCGTAAAAG 298 Query 530 AAAGGAAGCGTAGTGGTGGAGTCAAGAAAGCAAATGTTGCTCCTTTTTCACAAACGGCGA 589 | |||||||||| ||||||| ||||||||||||| |||||||||||| ||| || |||| Sbjct 299 AGAGGAAGCGTACTGGTGGATTCAAGAAAGCAAAGGTTGCTCCTTTTCCACGGACAGCGA 358 Query 590 GAGAGACACCTGAGTGGCTTGTCAAGGTGATGACAAACATGAAAGAAGCCAAAGACGCTA 649 ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 359 GAGAGACGCCTGAGTGGCTTGTCAAGGTGATGAGTGACATGAAAGAAGCTAAAGACGCTA 418 Query 650 AATTGATCTTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACAAAGAACCGTCTCT 709 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 419 AACTGATCTTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACACAGAACCGTCTCT 478 Query 710 CAATGCCTTTCAACAACTTACTCCGAAACGATTTCCTGACGTCTGTGGAGTCCATAATCA 769 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| Sbjct 479 CAATGCCTTTCAACAACTTACTCCGCAACGATTTCTTGACGTCTGTGGAGTCCAGAATCA 538 Query 770 TAAACGAAGACATCAACAACAATAACAAGATTGGAGTGGGAGCGATTCTCGTGGATCAAC 829 || || |||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 539 TAGACAAAGACATCAACAACGATAAGAAGATTGGAGTGGGAGCGATTCTCGTGGATCAAC 598 Query 830 GGTGTAAAAAGTGGGGTGTGATGTTAAAGAGATGGGAGATGAAGAAGGAATCAGGTAAAG 889 ||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 599 GGTCTGAGAAGTGGGGTGTGATGTTGAAGAGATGGGAGATGAAGAAGGAATCAGGTAAAG 658 Query 890 GAAGCTGGAGTTACAATTTGATTTGTGGGTGGAACGACATCGTTGAGGCTAACAGATTGA 949 ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 659 GAAGCTGGAATTACAATTTGATTTGTGGGTGGAACGATATCGTTGAGGCTAACGGATTGA 718 Query 950 AAGAAGGCGACAACATTACTCTTTGGTCGTTTAGGTGCTGTGGAATCCTCTGCTTTGCCA 1009 |||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct 719 AAGATGGCGACAACATTAGTCTTTGGTCGTTTAGGTGTTGTGGAATCCTCTGCTTTGCCA 778 Query 1010 TGGAACAGAGTAGCTCTTCCCTTGCTCTCTGTCTCTGCT 1048 ||||||||||||||||||||||||||||||||||||||| Sbjct 779 TGGAACAGAGTAGCTCTTCCCTTGCTCTCTGTCTCTGCT 817 Score = 172 bits (93), Expect = 4e-42 Identities = 127/142 (89%), Gaps = 7/142 (5%) Strand=Plus/Plus Query 148 gaagaagaattccagaagagaaTCTTTTGTCTCTTCCCGAGAAAAACAAGATCGTCTTTG 207 |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 GAAGCAGAAAGCCAGAAGAGAATCTTTTGTCTCTTCCCGAGAAAAATAAGATCGTCTTTG 60 Query 208 GTGAAGAGACAACAAAATCTTATTAGGGTTTCTACTTCTTCATCGCTTATCGATCTTAAC 267 ||||||||||||||||| |||| | || |||||| |||||||||||||||||||| Sbjct 61 GTGAAGAGACAACAAAACCTTAAT-GG------ACTTCTACATCGCTTATCGATCTTAAC 113 Query 268 CAGTTCCCTACCGATTCTGAGA 289 ||||||||||| |||||||||| Sbjct 114 CAGTTCCCTACTGATTCTGAGA 135 > Ahg497170 jgi|Araly1|497170|fgenesh2_kg.26__5__AT5G24050.1 Length=897 Score = 616 bits (333), Expect = 1e-175 Identities = 516/597 (86%), Gaps = 42/597 (7%) Strand=Plus/Plus Query 237 TTCTACTTCTTCATCGCTTATCGATCTTAACCAGTTCCCTACCGATTCTGAGATCGAAGA 296 ||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||| Sbjct 183 TTCTACTTCTTCATCGCTTATCGATATTAACCAGTTCCCTACTGATTCTGAGA-C--AGA 239 Query 297 CCCACAAAACCATCTTCAAG-GGCTATCCTCTTCATGTTTCATTGCCGCTAATTCCGAGA 355 |||||||||||||| || |||||| |||||||||||||| ||||| ||||||||| Sbjct 240 ---ACAAAACCATCTTC-AGTTGCTATCTTCTTCATGTTTCATCCCCGCTGATTCCGAGA 295 Query 356 CAAAAACATTACAAAACCCTAGTTCAGAACCTTGTTCTTCACTCGGACTCTTTGGTCACA 415 | || | || | ||| || ||||| | || || ||||| | | Sbjct 296 C--GAA-A--AC---A--CTA---CAAAACCTAG---TT--CT--GACTC--T--T---- 327 Query 416 AGACGGCTGAGTACC-AAAAGACGGAGACGAAAGACCCACCAAACCCTAATTTCCC-ATG 473 | |||||||| || | ||| ||||||||||||||||| ||| ||||| ||||| || Sbjct 328 --ATGGCTGAGT-CCGAGGAGAGGGAGACGAAAGACCCACAAAATCCTAA-TTCCCAATC 383 Query 474 TACTATGTCTTTGTGCCTAATGGAGAACACAAGCCGCAAGAGACGTGCTGTGGAACAAAG 533 | |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 384 TTCTATGTCTTTGTGCCTAACGGAGAACACAAGCCGCAAGAGACGTGCTGTGGAACAGAG 443 Query 534 GAAGCGTAGTGGTGGAGTCAAGAAAGCAAATGTTGCTCCTTTTTCACAAACGGCGAGAGA 593 |||||||| ||||||||||||||||||||| |||||||||| |||| || |||||||| Sbjct 444 GAAGCGTACTGGTGGAGTCAAGAAAGCAAAGGTTGCTCCTTCTTCAGGGACAGCGAGAGA 503 Query 594 GACACCTGAGTGGCTTGTCAAGGTGATGACAAACATGAAAGAAGCCAAAGACGCTAAATT 653 ||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||| | Sbjct 504 GACGCCTGAGTGGCTTGTCAAGGTGATGAGAGACATGAAAGAAGTTAAAGACGCTAAACT 563 Query 654 GATCTTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACAAAGAACCGTCTCTCAAT 713 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 564 GATATTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACACAGAACCGTCTCTCAAT 623 Query 714 GCCTTTCAACAACTTACTCCGAAACGATTTCCTGACGTCTGTGGAGTCCATAATCATAAA 773 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 624 GCCTTTCAACAACTTAATCCGAAACGATTTCCTGACGTCTGTGGAGTCCATAATCATAAA 683 Query 774 CGAAGACATCAACAACAATAACAAGATTGGAGTGGGAGCGATTCTCGTGGATCAACG 830 ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| Sbjct 684 CGAAGACATCAACAATAATAAGAAGATTGGAGTGGGAGTGATTCTCGTGGATCAACG 740 > Ahg930645 jgi|Araly1|930645|scaffold_303102.1 Length=475 Score = 614 bits (332), Expect = 5e-175 Identities = 408/445 (92%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 404 TCTTTGGTCACAAGACGGCTGAGTACC-AAAAGACGGAGACGAAAGACCCACCAAACCCT 462 |||||| | |||||| |||||||| || | ||| ||||||||||||||||| ||| ||| Sbjct 7 TCTTTGATTACAAGATGGCTGAGT-CCGAGGAGAGGGAGACGAAAGACCCACAAAATCCT 65 Query 463 AATTTCCC-ATGTACTATGTCTTTGTGCCTAATGGAGAACACAAGCCGCAAGAGACGTGC 521 || ||||| || | || ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 66 AA-TTCCCAATCTTCTCTGTCTTTGTGCCTAACGGAGAACACAAGCCGCAAGAGACGTGC 124 Query 522 TGTGGAACAAAGGAAGCGTAGTGGTGGAGTCAAGAAAGCAAATGTTGCTCCTTTTTCACA 581 ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 125 TGTGGAACAGAGGAAGCGTAGTGGTGGAGTCAAGAAAGCAAAGGTTGCTCCTTCTTCAGG 184 Query 582 AACGGCGAGAGAGACACCTGAGTGGCTTGTCAAGGTGATGACAAACATGAAAGAAGCCAA 641 || ||||||||||| ||||||||||||||||||||||||| | |||||||||||| || Sbjct 185 GACAGCGAGAGAGACGCCTGAGTGGCTTGTCAAGGTGATGAGAGACATGAAAGAAGTTAA 244 Query 642 AGACGCTAAATTGATCTTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACAAAGAA 701 |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 245 AGACGCTAAACTGATATTTGAGAAGACTCTGTTCGTGACTGATGTAAACCCAACACAGAA 304 Query 702 CCGTCTCTCAATGCCTTTCAACAACTTACTCCGAAACGATTTCCTGACGTCTGTGGAGTC 761 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 305 CCGTCTCTCAATGCCTTTCAACAACTTAATCCGAAACGATTTCCTGACGTCTGTGGAGTC 364 Query 762 CATAATCATAAACGAAGACATCAACAACAATAACAAGATTGGAGTGGGAGCGATTCTCGT 821 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 365 CATAATCATAAACGAAGACATCAACAACAATAAGAAGATTGGAGTGGGAGTGATTCTCGT 424 Query 822 GGATCAACGGTGTAAAAAGTGGGGT 846 ||||||||||| | | ||||||||| Sbjct 425 GGATCAACGGTCTGAGAAGTGGGGT 449 > Ahg930646 jgi|Araly1|930646|scaffold_303103.1 Length=237 Score = 255 bits (138), Expect = 3e-67 Identities = 197/223 (88%), Gaps = 13/223 (6%) Strand=Plus/Plus Query 7 AGTATCTATCACGATGATGACGATCATCTCACGGCTTCAGGTAAAGACCTGTGGTCGAAT 66 ||||| ||| ||||||| | | |||||||||||||||||| |||| | ||||||||||| Sbjct 24 AGTATGTATTACGATGA-G--GTTCATCTCACGGCTTCAGGGAAAGGCATGTGGTCGAAT 80 Query 67 TTCTGTGTACTGGTTGATGCGGCGGTTATGTTATATgaagaagaagaagaagaacaacgt 126 || ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 81 TTATGTGTACTGGTTGATGCGG-GGTTATGTTATAT---------GAAGAAGAACAACGT 130 Query 127 cgtaagattgtctctgaagaagaagaagaattccagaagagaaTCTTTTGTCTCTTCCCG 186 |||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct 131 CGTACGACTGTCTCTGAAGAAGAAGCAGAAAGCCAGAAGAGAATCTTTTGTCTCTTCCCG 190 Query 187 AGAAAAACAAGATCGTCTTTGGTGAAGAGACAACAAAATCTTA 229 |||||||||||||||||||||||||||||||||||||| |||| Sbjct 191 AGAAAAACAAGATCGTCTTTGGTGAAGAGACAACAAAAGCTTA 233 > Ahg930632 jgi|Araly1|930632|scaffold_303089.1 Length=420 Score = 182 bits (98), Expect = 6e-45 Identities = 126/140 (90%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288 GATCGAAGACCCACAAAACCATCTTCAAGGGCTATCCTCTTCATGTTTCATTGCCGCTAA 347 |||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||| | Sbjct 244 GATCGAAGACCCACAAAACCATCTTCAACGGCTAACTTCTTCATGTTTCATCGCCGCTGA 303 Query 348 TTCCGAGACAAAAACATTACAAAACCCTAGTTCAGAACCTTGTTCTTCACTCGGACTCTT 407 |||| |||| |||||| |||||||||||||||| |||| |||||||||||||| |||||| Sbjct 304 TTCCAAGACGAAAACACTACAAAACCCTAGTTCTGAACTTTGTTCTTCACTCGTACTCTT 363 Query 408 TGGTCACAAGACGGCTGAGT 427 || | |||||| |||||||| Sbjct 364 TGATTACAAGATGGCTGAGT 383 > Ahg887802 jgi|Araly1|887802|Al_scaffold_0123_3 Length=351 Score = 86.1 bits (46), Expect = 5e-16 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 288 GATCGAAGACCCACAAAACCATCTTCAAGGGCTATCCTCTTCATGTTTCATTGCCGCT 345 |||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||| Sbjct 292 GATCGAAGACCCACAAAACCATCTTCAACGGCTAACTTCTTCATGTTTCATCGCCGCT 349 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 39075989925 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5