BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G25250.1
Length=1666
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489376 jgi|Araly1|489376|fgenesh2_kg.6__2510__AT5G25250.1 2294 0.0
Ahg894427 jgi|Araly1|894427|Al_scaffold_0006_2423 1735 0.0
Ahg496707 jgi|Araly1|496707|fgenesh2_kg.8__2523__AT5G64870.1 1214 0.0
> Ahg489376 jgi|Araly1|489376|fgenesh2_kg.6__2510__AT5G25250.1
Length=1582
Score = 2294 bits (1242), Expect = 0.0
Identities = 1431/1522 (94%), Gaps = 14/1522 (1%)
Strand=Plus/Plus
Query 1 AAAGTCTTCTAAATCATTTGGGCGAAAAGT-CCAAAT--T-AAATC--A----AAAGATG 50
|||||||||||||||||||||| ||||| | |||||| | ||||| | |||||||
Sbjct 1 AAAGTCTTCTAAATCATTTGGGAGAAAAATCCCAAATCATCAAATCAAATCCTAAAGATG 60
Query 51 TTCAAAGTTGCAAGAGCGTCACAGTATTTGGCGATCACCGGTGCTGGTATCGAAGACATC 110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTCAAAGTTGCAAGAGCGTCACAGTATTTGGCGATCACCGGTGCTGGTATCGAAGACATA 120
Query 111 AAGCTTTCCAAGAAGTCATGGGTGTTTCCATGGCAATCTTGCACCGTCTTCGACGTTTCT 170
|||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 121 AAGCTTTCAAAGAAGTCATGGGTGTTTCCATGGCAATCTTGCACCATCTTCGATGTTTCT 180
Query 171 CCGGTGAACTATACTTTCAAAGTCCAAGCCATGAGCGCAGAGAAGCTTCCTTTTGTTCTT 230
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 181 CCGGTGAACTACACTTTCAAAGTCCAAGCCATGAGTGCAGAGAAGCTTCCTTTTGTTC-T 239
Query 231 CCC-GCTGTTTTTACGATTGGTCCTCGCGTTGATGACGATGACGCGCTGATTTTGTATGC 289
||| ||||||||||||||||||||||| || ||||||||||| ||||||||| |||| ||
Sbjct 240 CCCTGCTGTTTTTACGATTGGTCCTCGTGTCGATGACGATGAAGCGCTGATTCTGTACGC 299
Query 290 TAGGTTGATTTCTCCTCATGATAAAGATTCAAATCATGTCCATGAGCTTGTTGAAGGTGT 349
||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct 300 TAGGTTGATTTCTCCTCATGATAAAGAATCTAATCATGTTCATGAGCTTGTTGAAGGTGT 359
Query 350 TATTGAAGGAGAGACTCGTGTTCTTGCTGCTTCCATGACTATGGAAGAGATCTTTAAAGG 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TATTGAAGGAGAGACTCGTGTTCTTGCTGCTTCCATGACTATGGAAGAGATCTTTAAAGG 419
Query 410 GACAAAGGAGTTTAAGAAGGAGGTGTTTGATAAGGTTCAACTAGAATTAAACCAGTTTGG 469
||||||||||||||||||||| |||||||||||||| ||| | ||| |||| ||||||||
Sbjct 420 GACAAAGGAGTTTAAGAAGGAAGTGTTTGATAAGGTACAATTGGAACTAAATCAGTTTGG 479
Query 470 TCTT-GTGATATACAATGCCAATGTGAAGCAGCTCGTTGATGTGCCTGGACATGAATACT 528
| || || || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 480 T-TTAGTAATCTACAATGCCAATGTGAAGCAGCTTGTTGATGTGCCTGGACATGAATACT 538
Query 529 TCTCTTACTTGGGTCAGAAGACTCAAATGGAAGCAGCAAATCAGGCTAGGATCGATGTCT 588
||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| |
Sbjct 539 TCTCTTACTTGGGTCAGAAAACCCAAATGGAAGCAGCAAATCAGGCGCGGATCGATGTTT 598
Query 589 CTGAGGCCAAGATGAAGGGAGAGATCGGTGCCAAGGAACGGACTGGTCTTACTCTCCAGA 648
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 599 CTGAGGCGAAGATGAAGGGAGAGATCGGTGCCAAGGAACGGACTGGTCTTACCCTCCAGA 658
Query 649 ACGCAGCCAAAATTGACGCTGAGTCAAAGATCATATCGATGCAGAGGCAAGGAGAAGGAA 708
||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| |
Sbjct 659 ACGCAGCGAAGATTGATGCGGAATCAAAGATCATATCGATGCAGAGGCAAGGAGAAGGGA 718
Query 709 CAAAAGAAGAAATCAAAGTGAGGACTGAGGTTAAAGTGTTTGAGAATCAGAAGGAGGCTG 768
|||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 719 CAAAAGAAGAGATTAAAGTGAAGACTGAGGTTAAAGTGTTTGAGAATCAGAAGGAGGCTG 778
Query 769 ATGTAGCTAAGGCCAATGCCGAGCTTGCGATGAAAAAAGCTGCTTGGACTAAGGATGCTC 828
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 779 ATGTAGCTAAGGCCAATGCCGAGCTAGCGATGAAAAAAGCCGCTTGGACTAAGGATGCTC 838
Query 829 AGGTGGCTGAGGTTGAAGCAACCAAGGCCGTGGCTTTGAGAGAAGCTGAGCTTCAGACTC 888
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 839 AGGTGGCTGAGGTTGAAGCAACCAAAGCAGTGGCTTTGAGAGAAGCTGAGCTTCAGACTC 898
Query 889 AGGTCGAGAAAATGAACGCTTTGACTCGAACAGAGAAGCTCAAGGCTGAGTTCCTTAGCA 948
| |||||||||||||| || ||||| ||||| |||||||| || || ||||||||||| |
Sbjct 899 AAGTCGAGAAAATGAATGCATTGACCCGAACCGAGAAGCTTAAAGCCGAGTTCCTTAGTA 958
Query 949 AAGCTAGTGTTGAGTATGAAACCAAGGTTCAAGAAGCAAATTGGGAACTATACAACAAGC 1008
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 959 AAGCCAGTGTTGAGTATGAAACCAAGGTTCAAGAAGCAAACTGGGAACTATACAACAAGC 1018
Query 1009 AGAAACAAGCAGAGGCGGTTCTATACGAGAAACAAAAGCAAGCCGAGGCACAGAAAGCGC 1068
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 AGAAGCAAGCAGAGGCGGTTCTATACGAGAAACAAAAGCAAGCCGAGGCACAGAAAGCGC 1078
Query 1069 AAGCGGATGCGGCTTTCTACTCAAAGCAGAAAGAAGCAGAGGGACTTGTTGCCTTAGCTA 1128
|||| || || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 AAGCAGACGCAGCATTCTACTCAAAGCAGAAAGAAGCAGAGGGACTTGTTGCCTTAGCTA 1138
Query 1129 GTGCGCAAGGGACTTATCTAAGAACCCTCTTAGACGCTGTTCAGAATGACTATTCTTGTC 1188
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 GTGCTCAAGGGACTTATCTAAGAACCCTCTTAGACGCTGTTCAGAATGACTATTCTTGTC 1198
Query 1189 TTAGAGACTTCTTGATGATTAACAATGGTATTTATCAAGAGATCGCTAAGACTAATGCGA 1248
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1199 TTAGAGACTTCTTGATGATTAACAATGGTATTTATCAAGAGATCGCGAAGACTAATGCGA 1258
Query 1249 TGGCGGTTAGAGACTTGCAGCCCAAGATTAGTGTTTGGAACCATGGTGGAGAACAGGGTG 1308
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1259 TGGCGGTTAGAGACTTGCAGCCTAAGATTAGTGTTTGGAACCATGGTGGAGAACAAGGTG 1318
Query 1309 GTGGTAGTGGGAATGCTATGAAGGATATAGCTGGACTTTACAAGATGTTGCCTCCGGTTC 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GTGGTAGTGGGAATGCTATGAAGGATATAGCTGGACTTTACAAGATGTTGCCTCCGGTTC 1378
Query 1369 TTGATACGGTTTATGAGCAGACTGGGATGCAGCCACCTGCTTGGATCGGTACTCTACGTG 1428
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
Sbjct 1379 TTGATACGGTTTATGAGCAGACTGGGATGAAGCCACCGGCTTGGATCGGTACTCTACGCG 1438
Query 1429 GTGCGGAACCGAAGCAAGTGACTCGCAGCTAAGAGAATAGTGGCATGGTTTGGTCGTTTA 1488
|| |||||||||||||||||| || | || |||| |||||||||||||||||| ||||
Sbjct 1439 ATGTGGAACCGAAGCAAGTGACGCGAAACTGAGAGGATAGTGGCATGGTTTGGTTATTTA 1498
Query 1489 CTTGTGGTTGAAGATACATCCA 1510
||||||||||||||||||||||
Sbjct 1499 CTTGTGGTTGAAGATACATCCA 1520
> Ahg894427 jgi|Araly1|894427|Al_scaffold_0006_2423
Length=1398
Score = 1735 bits (939), Expect = 0.0
Identities = 1248/1396 (89%), Gaps = 26/1396 (2%)
Strand=Plus/Plus
Query 48 ATGTTCAAAGTTGCAAGAGCGTCACAGTATTTGGCGATCACCGGTGCTGGTATCGAAGAC 107
|||||||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||||||
Sbjct 1 ATGTTCAAGGTTGCAAGAGCATCACAATATTTGGCCATCACCGGTGGTGGGATCGAAGAT 60
Query 108 ATCAAGCTTTCCAAGAAGTCATGGGTGTTTCCATGGCAATCTTGCACCGTCTTCGACGTT 167
|||||||| || ||||| ||||||||| ||||||||||| |||||||| ||||||||
Sbjct 61 ATCAAGCTCTCGAAGAAATCATGGGTGCTTCCATGGCAAAAATGCACCGTTTTCGACGTG 120
Query 168 TCTCCGGTGAACTATACTTTCAAAGTCCAAGCCATGAGCGCAGAGAAGCTTCCTTTTGTT 227
||||| |||||||| |||||||||||||| || ||||| ||||||||||| |||||||||
Sbjct 121 TCTCCAGTGAACTACACTTTCAAAGTCCAGGCTATGAGTGCAGAGAAGCTACCTTTTGTT 180
Query 228 CTTCCCGCTGTTTTTACGATTGGTCCTCGCGTTGATGACGA-TGACGCGCTGATTTTGTA 286
||||| ||||| || || || || ||||| ||||||||| | ||| || || ||| ||||
Sbjct 181 CTTCCTGCTGTCTTCACTATCGGCCCTCGTGTTGATGAC-ACTGAAGCACTTATTCTGTA 239
Query 287 TGCTAGGTTGATTTCTCCTCATGATAAAGATTCAAATCATGTCCATGAGCTTGTTGAAGG 346
|||||| ||||||| ||||| || ||| | |||||||||||| ||||||||||||||||
Sbjct 240 CGCTAGGCTGATTTCGCCTCACGACAAACAGTCAAATCATGTCAATGAGCTTGTTGAAGG 299
Query 347 TGTTATTGAAGGAGAGACTCGTGTTCTTGCTGCTTCCATGACTATGGAAGAGATCTTTAA 406
||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 300 TGTTATTGAGGGAGAGACTCGTGTTCTCGCTGCTTCCATGACCATGGAAGAGATCTTCAA 359
Query 407 AGGGACAAAGGAGTTTAAGAAGGAGGTGTTTGATAAGGTTCAACTAGAATTAAACCAGTT 466
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 360 AGGGACAAAGGAGTTTAAGAAGGAGGTGTTTGATAAGGTTCAACTAGAATTGGACCAGTT 419
Query 467 TGGTCTTGTGATATACAATGCCAATGTGAAGCAGCTCGTTGATGTGCCTGGACATGAATA 526
||| || || || ||||||||||| || || ||||| ||||| ||||| |||||||| ||
Sbjct 420 TGGACTCGTAATCTACAATGCCAACGTCAAACAGCTGGTTGACGTGCCCGGACATGAGTA 479
Query 527 CTTCTCTTACTTGGGTCAGAAGACTCAAATGGAAGCAGCAAATCAGGCTAGGATCGATGT 586
||||||||||||||||||||| || ||||||||||| || |||||||| |||||||||||
Sbjct 480 CTTCTCTTACTTGGGTCAGAAAACCCAAATGGAAGCGGCCAATCAGGCCAGGATCGATGT 539
Query 587 CTCTGAGGCCAAGATGAAGGGAGAGATCGGTGCCAAGGAACGGACTGGTCTTAC-TCTCC 645
||||||||||||||||||||||||||||||||||||||||||| || ||||| | | |
Sbjct 540 GGCTGAGGCCAAGATGAAGGGAGAGATCGGTGCCAAGGAACGGACAGGGCTTACGT-TAC 598
Query 646 AGAACGCAGCCAAAATTGACGCTGAGTCAAAGATCATATCGATGCAGAGGCAAGGAGAAG 705
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 599 AGAACGCAGCGAAAATTGACGCGGAGTCAAAGATCATATCGATGCAGAGGCAAGGAGAAG 658
Query 706 GAACAAAAGAAGAAATCAAAGTGAGGACTGAGGTTAAAGTGTTTGAGAATCAGAAGGAGG 765
| ||||| | || |||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct 659 GGACAAAGGCGGAGATCAAAGTGAAGACTGAGGTAAAAGTGTTTGAGAATCAGAAGGAAG 718
Query 766 CTGATGTAGCTAAGGCCAA-TGCCGAGCTTGCGATGAAAAAAGCTGCTTGGACTAAGGAT 824
||||||||||||||||||| | | |||||||| |||||||||||||||||||| ||||||
Sbjct 719 CTGATGTAGCTAAGGCCAACT-CGGAGCTTGCCATGAAAAAAGCTGCTTGGACCAAGGAT 777
Query 825 GCTCAGGTGGCTGAGGTTGAAGCAACCAAGGCCGTGGCTTTGAGAGAAGCTGAGCTTCAG 884
||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 778 GCTAAGGTTGCTGAGGTTGAAGCAACCAAGGCTGTGGCTTTGAGAGAAGCTGAGCTTCAG 837
Query 885 ACTCAGGTCGAGAAAATGAACGCTTTGACTCGAACAGAGAAGCTCAAGGCTGAGTTCCTT 944
||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 838 ACTCAAGTTGAAAAAATGAACGCTTTGACTCGAACAGAGAAGCTCAAGGCCGAGTTCCTT 897
Query 945 AGCAAAGCTAGTGTTGAGTATGAAACCAAGGTTCAAGAAGCAAATTGGGAACTATACAAC 1004
|||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 898 AGCAAAGCCAGTGTTGAGTATGAAACCAAGGTTCAAGAAGCAAATTGGGAATTGTACAAT 957
Query 1005 AAGCAGAAACAAGCAGAGGCGGTTCTATACGAGAAACAAAAGCAAGCCGAGGCACAGAAA 1064
|||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||
Sbjct 958 AAGCAGAAGCAAGCAGAGGCGGTTTTATACGAGAAGCAAAAGCAAGCTGAGGCACAGAAA 1017
Query 1065 GC-GCAAGCGGATGCGGCTTTCTACTCAAAGCAGAA-AGAAGCAGAGGGACTTGTTGC-C 1121
|| | |||| || || | |||||||||||||| || ||||||||||||||||||||| |
Sbjct 1018 GCTG-AAGCAGACGCAACGTTCTACTCAAAGCA-AAGAGAAGCAGAGGGACTTGTTGCTC 1075
Query 1122 TTAGCTAGTGCGCAAGGGACTTATCTAAGAACCCTCTTAGACGCTGTTCAGAATGACTAT 1181
| ||| ||||| ||||| || ||||| ||||||||| ||||||| |||||||||||||||
Sbjct 1076 T-AGCCAGTGCTCAAGGAACATATCTCAGAACCCTCCTAGACGCAGTTCAGAATGACTAT 1134
Query 1182 TCTTGTCTTAGAGACTTCTTGATGATTAACAATGGTATTTATCAAGAGATCGCTAAGACT 1241
||||| ||||||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct 1135 TCTTGCCTTAGAGACTTCTTGATGATTAACAATGGCACTTATCAGGAGATCGCTAAGACT 1194
Query 1242 AATGCGA-TGGCGGTTAGAGACTTGCAGCCCAAGATTAGTGTTTGGAACCATGGTGGAGA 1300
|| || | | ||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1195 AACGC-ACTTGCGGTCAGAGACTTGCAGCCCAAGATTAGCGTTTGGAACCACGGTGGAGA 1253
Query 1301 ACAGGG--T-GGTGGT---------AGTGGGAATGCTATGAAGGATATAGCTGGACTTTA 1348
|||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1254 ACAGGGGATTGGTGGTGCTGGTGGGAGTGGGAATGCTATGAAGGATATAGCTGGACTTTA 1313
Query 1349 CAAGATGTTGCCTCCGGTTCTTGATACGGTTTATGAGCAGACTGGGATGCAGCCACCTGC 1408
||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1314 CAAGATGCTGCCTCCAGTTCTTGATACGGTTTACCAGCAGACTGGGATGCAGCCACCGGC 1373
Query 1409 TTGGATCGGTACTCTA 1424
||||||||||||||||
Sbjct 1374 TTGGATCGGTACTCTA 1389
> Ahg496707 jgi|Araly1|496707|fgenesh2_kg.8__2523__AT5G64870.1
Length=1519
Score = 1214 bits (657), Expect = 0.0
Identities = 1179/1427 (83%), Gaps = 52/1427 (4%)
Strand=Plus/Plus
Query 50 GTT-CAAAGTTGC-AAGAGCGTCACAGTAT-TTGGCGATCACCGGTGCTGGTATCGA-AG 105
||| || ||| || || ||| || |||||| || ||||||||||||| ||| ||| | ||
Sbjct 70 GTTACAGAGTCGCTAA-AGCATCGCAGTATCTT-GCGATCACCGGTGGTGGAATC-ACAG 126
Query 106 ACATCAAGCTTTCCAAGAAGTCATGGGTGTTTCCATGGCAATCTTGCACCGTCTTCGACG 165
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 127 ACATCAAGCTTGCCAAGAAGTCATGGGTGTTTCCATGGCAGTCTTGCACCGTCTTCGACG 186
Query 166 TTTCTCCGGTGAACTATAC-TTTCAAAGTCCAAGCCATGAGCGCAGAGAAGCTTCCTTTT 224
||||||| |||||||| || ||| | || ||||| ||||| | ||||| ||||| |||
Sbjct 187 TTTCTCCCGTGAACTACACGTTT-GAGGTTCAAGCTATGAGTTCCGAGAAACTTCCCTTT 245
Query 225 GTTCTTCCCGCTGTTTTTACGATTGGTCCTCGCGTTGATGACGATGACGCGCTGATT-TT 283
||| |||| || ||||| || || || ||||||||||||||| | |||| || || ||
Sbjct 246 GTTATTCCGGCGGTTTTCACAATCGGCCCTCGCGTTGATGACCCTCACGCTCT-CTTGTT 304
Query 284 GTATGCTA-GGTTGATTTCTCCTCATGATAAAG-ATTCAAATCATGTCCATGAGCTTGTT 341
||| || | | || || |||| || ||| ||| | || ||||| ||| |||||||||||
Sbjct 305 GTACGCCATGCTT-ATGTCTCAACACGAT-AAGCACTCGAATCACGTCAATGAGCTTGTT 362
Query 342 GAAGGTGTTATTGAAGGAGAGACTCGTGTTCTTGCTGCTTCCATGACTATGGAAGAGATC 401
| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct 363 CAGGGTGTTATCGAAGGAGAGACTCGTGTTCTTGTTGCTGCCATGACTATGGAAGAGGTC 422
Query 402 TTTAAAGGGACAAAGGAGTTTAAGAAGGAGGTGTTTGATAAGGTTCAACTAGAATTAAAC 461
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct 423 TTCAAAGGAACAAAGGAGTTCAAGAAGGAAGTGTTTGACAAGGTTCAACTAGAGCTAAAC 482
Query 462 CAGTTTGGTCTTGTGATATACAATGCCAATGTGAAGCAGCTCGTTGATGTGCCTGGACAT 521
|||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 483 CAGTTTGGTCTTGTTATCTACAACGCCAATGTGAAGCAGCTTGTTGATGTGCCTGGACAT 542
Query 522 GAATACTTCTCTTACTTGGGTCAGAAGACTCAAATGGAAGCAGCAAATCAGGCTAGGATC 581
|||||||||||||||||||| ||||| ||||| |||||||||||||| || || | ||||
Sbjct 543 GAATACTTCTCTTACTTGGGCCAGAAAACTCAGATGGAAGCAGCAAACCAAGCCAAGATC 602
Query 582 GATGTCTCTGAGGCCAAGATGAAGGGAGAGATCGGTGCCAAGGAACGGA-CTGGTCTTAC 640
||||| | ||||| ||||||||||||||| | |||||||| ||||||| | || || ||
Sbjct 603 GATGTAGCAGAGGCAAAGATGAAGGGAGAGGTTGGTGCCAAAGAACGGAAC-GGACTCAC 661
Query 641 TCTCCAGAACGCAGCCAAAATTGACGCTGAGTCAAAGATCATATCGA-TGCAGAGGCAAG 699
||||||| |||||||| ||||||||||||||||||||||| || | | ||||||| ||
Sbjct 662 AATCCAGAATGCAGCCAAGATTGACGCTGAGTCAAAGATCATCTCCACT-CAGAGGCTAG 720
Query 700 GAGAAGGAACAAAAGAAGAAATCAAAGTGAGGACTGAGGTTAAAGTGTTTGAGAATCAGA 759
||||||| |||||||| || ||||| |||| |||||| || ||||||||| ||||| |||
Sbjct 721 GAGAAGGGACAAAAGAGGAGATCAAGGTGAAGACTGAAGTCAAAGTGTTTCAGAATGAGA 780
Query 760 AGGAGGCTGATGTAGCTAAGGCCAATGCCG-AGCTTGCGATGAAAAAAGCTGCTTGGACT 818
| |||||| ||| |||||||| |||| | | || ||||| |||| ||||||| | |
Sbjct 781 AAGAGGCTCTTGTTGCTAAGGCTGATGCAGCA-CTGGCGATTCAAAAGGCTGCTTTGTCC 839
Query 819 -AAGGA-TGCTCAG-GTGGCTGAGGTTGAAGCAACCAAGGCCGTGGCTTTGAGAGAAGCT 875
|| | | ||| | |||||||||||||||||| ||||||| || |||||||| ||||||
Sbjct 840 CAAA-ACT-CTC-GTGTGGCTGAGGTTGAAGCATCCAAGGCTGTTGCTTTGAGGGAAGCT 896
Query 876 GAGCTTCAGACTCAGGTCGAGAAAATGAACGCTTTGACTCGAACAGAGAAGCTCAAGGCT 935
|||||||||||| | |||||||||||||| || |||||||| ||||||||||| || |||
Sbjct 897 GAGCTTCAGACTAAAGTCGAGAAAATGAATGCATTGACTCGGACAGAGAAGCTTAAAGCT 956
Query 936 GAGTTCCTTAGCAAAGCTAGTGTTGAGTATGAAACCAAGGTTCAAGAAGCAAATTGGGAA 995
|||||||| || ||||| ||||||||||||||||| ||||| |||||||| || |||||
Sbjct 957 GAGTTCCTCAGTAAAGCCAGTGTTGAGTATGAAACTAAGGTGCAAGAAGCTAACTGGGAG 1016
Query 996 CTATACAACAAGCAGAAA-CAAGCAGAGGCGGTTCTATACGAGAAACAAAAGCAAGCCGA 1054
||||||| ||||| ||| |||||||| || ||||| |||||||| || |||||||| ||
Sbjct 1017 TTATACAATAAGCA-AAAGCAAGCAGAAGCTGTTCTTTACGAGAAGCAGAAGCAAGCGGA 1075
Query 1055 GGC-ACAGAAAGC-GCAAGCGGATGCGGCTTTCTACTC-AAAGCAGAAAGAAGCAGAGGG 1111
||| | |||||| ||| || ||||| || ||||| || ||| |||||||| ||||||||
Sbjct 1076 GGCGAT-GAAAGCAGCA-GCTGATGCTGCCTTCTATTCTAAA-CAGAAAGATGCAGAGGG 1132
Query 1112 ACTTGTTGCCTTAGCT-AGTGCGCAAGGGACTTATCT-AAGAACCCTCTTAGACGCTGTT 1169
||||| || | || | || || |||| ||||| |||| ||||||||| ||| |||
Sbjct 1133 GCTTGTGGCAATGGCCGAA-GCTCAGGGGAAATATCTCAAGA-CCCTCTTAGGCGCAGTT 1190
Query 1170 CAGAATGACTATTCTTGTCTT-AGAGACTTCTTGATGATTAACAATGGTATTTATCAAGA 1228
| ||||| || || | | | || |||||||||||||| |||||||| |||||||||||
Sbjct 1191 AACAATGATTACTCATC-CATGAGGGACTTCTTGATGATCAACAATGGCATTTATCAAGA 1249
Query 1229 GATCGCTAAGACTAATGCGATGGCGGTTAGAG-ACTTGCAGCCCAAGATTAGTGTTTGGA 1287
||||| || || ||||| |||| | | || || ||||||| ||||| ||||| ||||
Sbjct 1250 AATCGCCAAAACCAATGCTCTGGCTATCA-AGGACCTGCAGCCTAAGATCAGTGTGTGGA 1308
Query 1288 ACCATGGTGGAGA--A-CAGGG--TGGT-GGTAGTGGGAATGCT---ATGAAGGATATAG 1338
|||||||||| | | ||||| || ||| |||| || | | ||||| ||||| |
Sbjct 1309 ACCATGGTGGTGCCGAGCAGGGGATGAACGGTGGTGGTAAAGGTCCGATGAACGATATTG 1368
Query 1339 CTGGACTTTACAAGATGTTGCCTCCGGTTCTTGATACGGTTTATGAGCAGACTGGGATGC 1398
||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct 1369 CTGGACTATACAAGATGTTGCCACCGGTTCTTGACACGGTTTATGAGCAGACCGGGATGC 1428
Query 1399 AGCCACCTGCTTGGATCGGTACTCTACGTGGTGCGGAACCGAAGCAA 1445
||||||| |||||||| ||||| ||||||||||| || || || |||
Sbjct 1429 AGCCACCAGCTTGGATTGGTACACTACGTGGTGCTGAGCCCAAACAA 1475
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62468001800
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5