BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G25400.1
Length=1050
Score E
Sequences producing significant alignments: (Bits) Value
Ahg942103 jgi|Araly1|942103|scaffold_602647.1 1735 0.0
Ahg940598 jgi|Araly1|940598|scaffold_601142.1 989 0.0
Ahg932703 jgi|Araly1|932703|scaffold_400691.1 865 0.0
Ahg944722 jgi|Araly1|944722|scaffold_700951.1 828 0.0
> Ahg942103 jgi|Araly1|942103|scaffold_602647.1
Length=1090
Score = 1735 bits (939), Expect = 0.0
Identities = 1013/1050 (96%), Gaps = 0/1050 (0%)
Strand=Plus/Plus
Query 1 ATGGGTAAAGGTGGATCACTAAGCGAAGGCGTGATTAAGAACATAATCATCTCCTACACA 60
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 21 ATGGGGAAAGGTGGATCACTAAGCGAAGGTGTGATTAAGAACATAATCATCTCCTACACA 80
Query 61 TACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATATATCCTC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 81 TACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATACATCCTC 140
Query 121 GACAAGAAGATGTACGATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCTTT 180
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 141 GACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCTTT 200
Query 181 TGCTCAACCCTAGCTTTTCTTCTCATCAAGGTCTTCAAATTTGTCGAACCGGTCTCAATG 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 201 TGCTCAACCCTAGCTTTTCTTCTCATCAAGGTCTTCAAATTTGTTGAACCGGTCTCAATG 260
Query 241 TCACGTGACACTTATCTCAGATCCGTCGTCCCGATCGGAGCCTTGTATTCACTCTCTCTT 300
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 261 TCACGTGACACTTATCTCAGATCCGTCGTCCCGATCGGCGCGTTGTATTCACTCTCTCTT 320
Query 301 TGGCTCTCTAACTCAGCCTACATTTACCTCTCGGTCTCCTTCATTCAGATGCTCAAAGCG 360
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 321 TGGCTCTCTAACTCAGCCTACATTTACCTCTCTGTCTCCTTCATTCAAATGCTCAAAGCG 380
Query 361 TTAATGCCAGTCGCCGTTTATTCAATTGGCGTGCTCTTCAAGAAAGAGGGTTTCAAATCT 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 TTAATGCCAGTCGCGGTTTATTCAATTGGCGTGCTCTTCAAGAAAGAGGGTTTCAAATCT 440
Query 421 GAGACGATGATGAACATGCTTTCGATCTCATTTGGTGTAGCCATTGCTGCTTATGGCGAA 480
||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 441 GAGACAATGATTAACATGCTATCGATCTCATTTGGTGTAGCCATTGCTGCTTATGGTGAA 500
Query 481 GCTAGATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCTGTTGCTTTCGAGGCGACT 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 501 TCTAGATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCGGTTGCTTTCGAGGCGACA 560
Query 541 CGTTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCACTTTGAATCCTATCACT 600
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 561 CGGTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCACGTTGAATCCAATCACT 620
Query 601 TCTCTTTATTACGTTGCTCCTTGCTGCTTAGCTTTCTTGTTTATCCCTTGGATTGTCGTG 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 621 TCTCTTTATTACGTTGCTCCTTGTTGCTTAGCTTTCTTGTTTATCCCTTGGATTGTCGTG 680
Query 661 GAGTTTCCGATCTTGAGAGATACCTCTAGCTTCCATTTCGATTACCTCATTTTCGGGACG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 681 GAGTTTCCGATCTTGAGAGATACCTCTAGCTTCCATTTCGATTACCTCATTTTCGGGACG 740
Query 721 AATTCGTTCTGTGCATTTGCTCTGAATCTTGCTGTGTTTCTTTTGGTTGGGAAAACCTCT 780
||||| || ||||| |||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 741 AATTCTTTTTGTGCGTTTGCTTTGAATCTTGCTGTGTTTCTTCTGGTTGGGAAAACCTCT 800
Query 781 GCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGATCGCCTTTTCGTGG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 801 GCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGATCGCCTTTTCGTGG 860
Query 841 TCGGTCATTAAGGACACAGTGACTCCTATTAATCTTTTTGGTTATGGGATTGCTTTCTTG 900
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 861 TCGGTCATTAAGGACACTGTGACTCCTATTAATCTTTTTGGTTATGGGATTGCTTTCTTG 920
Query 901 GGAGTTGCGTATTATAATCACGCGAAGCTACAAGCATTGAAGGCTAAAGAAGCTCAGAAG 960
|| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 921 GGTGTTGCGTACTATAATCACGCGAAGTTACAAGCATTGAAGGCTAAAGATGCTCAGAAG 980
Query 961 ACTGCTCAGCAAGTTGATGAAGAGACTGGTCGGCTTTTGGAAGAGAGGGAAGGAAATGAA 1020
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 981 ACTGCTCAGCAAGTTGATGAAGAGAGTGGTCGGCTTTTGGAAGAAAGGGAAGGAAATGAA 1040
Query 1021 GGTGGGAGGAAGAATGAGCCAGAGGATTAA 1050
|||||||| ||||| |||||||| ||||||
Sbjct 1041 GGTGGGAGAAAGAACGAGCCAGATGATTAA 1070
> Ahg940598 jgi|Araly1|940598|scaffold_601142.1
Length=1095
Score = 989 bits (535), Expect = 0.0
Identities = 889/1057 (84%), Gaps = 35/1057 (3%)
Strand=Plus/Plus
Query 1 ATGGGTAAAGGTGGATCACTAAGCGAAGGCGTGATTAAGAACA-TAATCATCTCCTACA- 58
||||| ||||| || ||||||||||| ||||||| ||||||| | || |||| ||||
Sbjct 22 ATGGGGAAAGGCGGCGCACTAAGCGAAAGCGTGATAAAGAACATTGTTC-TCTCATACAG 80
Query 59 CATACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATATATCC 118
| |||||||| |||||||||||| |||||||||| || ||||||||||||||||| ||||
Sbjct 81 C-TACGTAGCGATATGGATCTTCTTAAGCTTCACGGTAATCGTCTACAACAAATACATCC 139
Query 119 TCGACAAGAAGATGTACGATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCT 178
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 140 TCGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCT 199
Query 179 TTTGCTCAACCCTAGCTTTTCTTC-TCATCAAGGTCTTCAAATTTGTCGAACCGGTCTCA 237
|||||||||||||||||||||| | |||||||||| |||||||| ||||| || || | |
Sbjct 200 TTTGCTCAACCCTAGCTTTTCT-CATCATCAAGGTTTTCAAATTCGTCGAGCCTGT-TAA 257
Query 238 A-TGTCACGTGACACTTATCTCAGATCCGTCGTCCCGATCGGAGCCTTGTATTCACTCTC 296
| || | || || ||||| || |||||||||||||||||||| || ||||| | || ||
Sbjct 258 AATGACTCGCGAGACTTACCTGAGATCCGTCGTCCCGATCGGTGCTTTGTACGCTCTATC 317
Query 297 TCTTTGGCTCTCTAACTCAGCCTACATTTACCTCTCGGTCTCCTTCATTCAGATGCTCAA 356
|| ||| | || || || || ||||||||||| || |||||||| || |||||||| ||
Sbjct 318 ACTCTGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAA 377
Query 357 AGCGT-TAATGCCAGTCGCCGTTTATTCAATTGGCGTGCTCTTCAAGAAAGAGGGTTTCA 415
||| | | ||||| ||||| ||||| || || || || || |||||||| || |||||||
Sbjct 378 AGC-TCTGATGCCTGTCGCTGTTTACTCGATCGGTGTTCTGTTCAAGAAGGAAGGTTTCA 436
Query 416 AATCTGAGACGATGATGAACATGCTTTCGATCTCATTTGGTGTAGCCATTGCTGCTTATG 475
||||||| || |||||||| ||||| ||||| || |||||||| || |||||||||||||
Sbjct 437 AATCTGATACTATGATGAATATGCTCTCGATTTCGTTTGGTGTTGCGATTGCTGCTTATG 496
Query 476 GCGAAGCTAGATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCTGTTGCTTTCGAGG 535
| |||||||| || |||||||||||||||||||| |||||||||||||||||||| || |
Sbjct 497 GAGAAGCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGAAG 556
Query 536 CGACTCGTTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCA--CTTTGAATCC 593
| ||||||||||| ||||||||||||| ||| |||||| || | ||| |||||
Sbjct 557 CCACTCGTTTGGTTTTGATTCAGATCTTACTTGGGGATAAAGGGATTAAGCTT--AATCC 614
Query 594 TATCACTTCTCTT-TATTACGTTGCTCCTTGCTGCTTAGCTTTCTTGTTTATCCCTTGGA 652
|| ||||| || ||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct 615 CATTACTTCG-TTATATTACGTTGCTCCTTGTTGCTTAGCTTTCTTGTTTATTCCATGGA 673
Query 653 T-TGTCGTGGAGTTTCCGAT-CTTGAGAGATACCTCTAGCTTCCATTTCGATTAC-CTCA 709
| | ||| ||||||||| | ||| |||||||| |||||||| || || |||||| |
Sbjct 674 TCTA-CGTTGAGTTTCCGGTTCTT-AGAGATACGTCTAGCTTTCACTTGGATTACGCGG- 730
Query 710 TTTTCGGGACGAATTCGTTCTGTGCATTTGC-TCTGAATCTTGCTGTGTTTCTTTTGGTT 768
|||||||| |||||||||||||||| ||||| | |||||||||||||||| |||||||||
Sbjct 731 TTTTCGGGGCGAATTCGTTCTGTGCGTTTGCGT-TGAATCTTGCTGTGTTCCTTTTGGTT 789
Query 769 GGGAAAACCTCTGCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGATC 828
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 790 GGGAAAACCTCTGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGATT 849
Query 829 GCCTTT-TCGTGGTCGGTCATTAAGGACACAGTGACTCCTATTAATCTTTTTGGTTATGG 887
|| ||| || ||||| || |||||||| || |||||||||||||| ||||| || || ||
Sbjct 850 GC-TTTCTCTTGGTCTGTGATTAAGGATACTGTGACTCCTATTAACCTTTTCGGGTACGG 908
Query 888 GATTGC-TTTCTTGGGAGTTGCGTATTATAATCACGCGAAGCTACAAGCATTGAAGGCTA 946
|||||| ||| ||||||||||||||||| || ||||||||| |||| || ||||||||||
Sbjct 909 GATTGCGTTT-TTGGGAGTTGCGTATTACAACCACGCGAAGTTACAGGCCTTGAAGGCTA 967
Query 947 AAGA--AGCTCA-GAAGACTGCTCAGCAAGTTGATGAAGAGACTGGTCGGCTT--TTGGA 1001
|||| || | ||||| | |||||||| |||||| |||| ||||||| || ||| |
Sbjct 968 AAGAGGAGGAGAAGAAGAAGGTTCAGCAAGCTGATGAGGAGAGTGGTCGG-TTGCTTG-A 1025
Query 1002 AGAGAGGGAAGGAAATGAAGGTGGGAGGAAGAATGAG 1038
|||||||||||| ||| || || | ||||||||||
Sbjct 1026 AGAGAGGGAAGGTGATGGAGAAGGTAAGAAGAATGAG 1062
> Ahg932703 jgi|Araly1|932703|scaffold_400691.1
Length=1087
Score = 865 bits (468), Expect = 0.0
Identities = 846/1027 (82%), Gaps = 32/1027 (3%)
Strand=Plus/Plus
Query 1 ATGGGTAAAGGTGGAT-CACTAAGCGAAGGCGTGATTAAGAACATAATCATCTCCTACAC 59
||||| |||||| | | |||| ||| || ||||| || || || ||| | || |||||
Sbjct 24 ATGGGGAAAGGTCG-TGCACTTTCCGACGGAGTGATAAAAAAGATCATCCTTTCATACAC 82
Query 60 ATACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATATATCCT 119
|| || ||||| ||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 83 CTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTCATCGTCTACAACAAATACATCCT 142
Query 120 CGACAAGAAGATGTACGATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCTT 179
||||||||||||||| ||||||||| ||| || | ||||| ||||| |||||| ||
Sbjct 143 CGACAAGAAGATGTATAATTGGCCATACCCAATAACTCTCACCATGATTCACATGGGTTT 202
Query 180 TTGCTCAACCCTAGCTTTTCTTCTCATCAAGGTCTTCAAATTTGTCGAACCGGTCTCAAT 239
|||||| || ||||| | |||||||||| ||||||||| | ||||| || || |||||
Sbjct 203 TTGCTCTTCCTTAGCTGTGATTCTCATCAAAGTCTTCAAAGTCGTCGAGCCAGTTTCAAT 262
Query 240 GTCACGTGACACTTATCTCAGATCCGTCGTCCCGATCGGAGCCTTGTATTCACTCTCTCT 299
|||||| || |||||||||||||||||||| || ||||| || ||||| |||||||||||
Sbjct 263 GTCACGCGAGACTTATCTCAGATCCGTCGTACCAATCGGCGCGTTGTACTCACTCTCTCT 322
Query 300 TTGGCTCTCTAACTCAGCCTACATTTACCTCTCGGTCTCCTTCATTCAGATGCTCAAAGC 359
|||| | || ||||| || ||||| |||||||| || ||||||||||| |||||||||||
Sbjct 323 TTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTATCCTTCATTCAAATGCTCAAAGC 382
Query 360 GT-TAATGCCAGTCGCCGTTTATTCAATTGGCGTGCTCTTCAAGAAAGAGGGTTTCAAAT 418
| ||||||| || || ||||| ||||| || || | || ||||||||| ||||||||
Sbjct 383 -TCTAATGCCTGTAGCTGTTTACTCAATCGGAGTTTTGTTAAAGAAAGAGACTTTCAAAT 441
Query 419 CTGAGACGATGA-TGAACATGCTTTCGATCTCATTTGGTGTAGCCATTGCTGCTTATGGC 477
|| |||| |||| | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct 442 CTCAGACTATGACT-AACATGCTCTCGATCTCGTTTGGTGTTGCTATTGCTGCTTATGGT 500
Query 478 GAAGCT-AGATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCTGTTGCTTTCGAGGC 536
|||||| || || |||| ||||||||| |||| |||||||||||||||||||| || ||
Sbjct 501 GAAGCTAAG-TTTGATGGTTGGGGTGTTTTTCTTCAGCTTGGTGCTGTTGCTTTTGAAGC 559
Query 537 GACTCGTTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCACT-TTGAATCCTA 595
|| | ||||| ||||||||||||||||||||||||||||||||| | || ||||| |
Sbjct 560 TACAAGGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAAGGAATCAATCTT-AATCCAA 618
Query 596 TCACTTCTCTTTATTACGTTGCTCCTTGCTGCTTAGCTTTCTTGTTTATCCCTTGGAT-T 654
|||||||||| ||||||||||||||||| || || | |||| | | | | |||||||| |
Sbjct 619 TCACTTCTCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTCCTCTCTGTGCCTTGGATCT 678
Query 655 GTCGTGGAGTTTCC-GATCTTGAGAGATACCTCTAGCTTCCATTTCGATTACCTCAT-TT 712
| ||||||||||| | |||| |||||||| || || ||||||||||||| | | || ||
Sbjct 679 TT-GTGGAGTTTCCAGTTCTT-AGAGATACTTCGAGTTTCCATTTCGATTTCTTGATCTT 736
Query 713 TCGGGACGAATTC-GTTCTGTGCATTTGCTCTGAATCTTGCTGTGTTTCTTT-TGGTTGG 770
| || || ||||| ||| ||||| |||||| |||||||||||||||| ||| | |||||
Sbjct 737 T-GGAACCAATTCTGTT-TGTGCGTTTGCTTTGAATCTTGCTGTGTT-CTTGCTCGTTGG 793
Query 771 GAAAACCTCTGCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGATCGC 830
|||||||||||||||||| |||||||| |||||||| ||||| || ||||||||||| ||
Sbjct 794 GAAAACCTCTGCTTTGACAATGAATGTGGCTGGTGTTGTTAAAGATTGGCTCTTGATTGC 853
Query 831 CTTTTCGTGGTCGGTCATTAAGGACACAGTGACTCCTATTAATCTTTTTGGTTATGGGA- 889
|| ||||||||||| ||||||||||| || || || || ||||| ||||||||||| |
Sbjct 854 ATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCGATCAATCTGTTTGGTTATGG-AC 912
Query 890 TTGC-TTTCTTGGGAGTTGCG-TATTATAATCAC-GCGAAGCTACAAGCATTGAAGGCTA 946
|||| ||| ||||| |||| | ||||| |||||| || ||| |||| || ||||| ||||
Sbjct 913 TTGCCTTT-TTGGGTGTTG-GATATTACAATCACTGC-AAGTTACAGGCGTTGAAAGCTA 969
Query 947 AAGAAGCTCAGAAGACTGCTCAG-CAAGTTGATGAAGA-GACTGGTCGGCTTTTGGAAGA 1004
|||| || ||||||| | |||| ||||| ||||| || | |||| ||||||||||||
Sbjct 970 AAGATGCACAGAAGAAGGTTCAGGCAAGT-GATGAGGAAG-CTGGGAAGCTTTTGGAAGA 1027
Query 1005 GAGGGAA 1011
|||||||
Sbjct 1028 GAGGGAA 1034
> Ahg944722 jgi|Araly1|944722|scaffold_700951.1
Length=1093
Score = 828 bits (448), Expect = 0.0
Identities = 843/1031 (82%), Gaps = 37/1031 (4%)
Strand=Plus/Plus
Query 1 ATGGGTAAAGGTGGAT-CACTAAGCGAAGGCGTGATTAAGAACATAATCATCTCCTACAC 59
||||| ||||| || | | || ||||| || || || ||||| || || ||||||||||
Sbjct 21 ATGGGAAAAGGCGG-TGCGCTTAGCGATGGAGTCATCAAGAAGATCCTCCTCTCCTACAC 79
Query 60 ATACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATATATCCT 119
||||| || || ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 80 CTACGTCGCGATCTGGATCTTCCTCAGCTTCACCGTCATCGTCTACAACAAATACATCCT 139
Query 120 CGACAAGAAGATGTACGATTGGCCATTCCCGATCTCACTCACAATGATCCACATGTCCTT 179
|||||||||||||||| ||||||| || |||||| ||||||| |||||||||||| | ||
Sbjct 140 CGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACCATGATCCACATGGCTTT 199
Query 180 TTGCTCAACCCTAGCTTTTCTTC-TCATCAAGGTCTTCAAATTTGTCGAACCGGTCTCAA 238
|||||| |||| || | | || ||||||| ||||||||| | ||||| || || ||||
Sbjct 200 TTGCTCTTCCCTCGCCGT-CATCCTCATCAAAGTCTTCAAAATCGTCGAGCCTGTTTCAA 258
Query 239 TGTCACGTGACACTTATC-TCAGATCCGTCGTCCCGATCGGAGCCTTGTATTCACTCTCT 297
||||||| || ||||| | ||||||| || ||||||||||| || ||||| || ||||||
Sbjct 259 TGTCACGAGAGACTTA-CATCAGATCTGTAGTCCCGATCGGTGCTTTGTACTCGCTCTCT 317
Query 298 CTTTGGCTCTCTAACTCAGCCTACATTTACCTCTCGGTCTCCTTCATTCAGATGCTCAAA 357
|| |||||||| || || || |||||||||||||| |||||||||||||||||||| |||
Sbjct 318 CTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTCATTCAGATGCTTAAA 377
Query 358 GCGTTAATGCCAGTCGCCGTTTATTCAATTGGCGTGCT-CTTCAAGAAAGAGGGTTTCAA 416
|| ||||||| ||||| ||||| ||||| || || || ||| |||||||| ||||||
Sbjct 378 GCCCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTT-AAGAAAGAATCTTTCAA 436
Query 417 ATCTGAGACGATGA-TGAACATGCTTTCGATCTCATTT-GGTGTAGCCATTGCTGCTTAT 474
||| |||||||||| | |||||||| |||||||| ||| ||||| || |||||||||||
Sbjct 437 ATCGGAGACGATGACT-AACATGCTCTCGATCTC-TTTCGGTGTCGCGATTGCTGCTTAC 494
Query 475 GGCGAAGCTAGATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCTGTTGCTTTCGAG 534
|| || |||| ||||||| ||||| || || || ||||||||||| || ||||| |||
Sbjct 495 GGTGAGGCTAAATTCGATACCTGGGGAGTCATGCTTCAGCTTGGTGCCGTAGCTTTTGAG 554
Query 535 GCGACTCGTTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCACT-TTGAATCC 593
|| || | ||||| |||||||||||||||| |||||||||||||||| | || |||||
Sbjct 555 GCAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATCAATCTT-AATCC 613
Query 594 TATCACTTCTCTT-TATTACGTTGCTCCTTGCTGCTTAG-CTTTCT-TGTTTATCCCTTG 650
|||||||| ||| || ||||| |||||||| || || | ||| || | ||| |||||||
Sbjct 614 AATCACTTC-CTTGTACTACGTCGCTCCTTGTTGTTTGGTCTTCCTCT-TTT-TCCCTTG 670
Query 651 GAT-TGTCGTGGAGTTTCCGAT-CTTGAGAGATACC-TCTAGCTTCCATTTCGATTACCT 707
||| | |||| || | ||||| ||| || || | | || || ||||| ||||||| | |
Sbjct 671 GATCT-TCGTTGAACTCCCGATTCTTAAG-GA-ATCATCGAGTTTCCACTTCGATTTCGT 727
Query 708 CATTTTCGGGACGAATTC-GTTCTGTGCATTTGCTCTGAATCTTGCTGTGTTTCTTTTGG 766
||||||||||| ||||| || |||||||||||| |||| || |||||||| ||| | |
Sbjct 728 GATTTTCGGGACTAATTCCGTA-TGTGCATTTGCTTTGAACCTCGCTGTGTTCCTTCTCG 786
Query 767 TTGGGAAAACCTCTGCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGA 826
|||| |||||||| ||||| || |||||||||||||||||||||||||| ||||| ||||
Sbjct 787 TTGGAAAAACCTCGGCTTTAACGATGAATGTTGCTGGTGTGGTTAAGGATTGGCTTTTGA 846
Query 827 TCGCCTTTTCGTGGTCGGTCATTAAGGACACAGTGACTCCTATTAATCTTTTTGGTTATG 886
| ||||| || ||||| || ||||| || || || ||||| ||||||| || ||||| |
Sbjct 847 TTGCCTTCTCTTGGTCTGTGATTAAAGATACGGTTACTCCGCTTAATCTCTTCGGTTACG 906
Query 887 GGATTGCTTTCTTGGGAGTTGCGTATTATAATCAC-GCGAAGCTACAAGCATTGAAGGCT 945
|| |||| |||||||| ||||| ||||| |||||| || ||| | || || |||||||||
Sbjct 907 GGCTTGCGTTCTTGGGTGTTGCCTATTACAATCACTGC-AAGTTGCAGGCTTTGAAGGCT 965
Query 946 AAAGAAGCTCAGAAGACTGCTCAGCAAGT-TGATGAAGA-GACTGGTCGG---CTTTTGG 1000
||||| |||||||||| | ||||||| | ||||||||| | ||| | || |||||||
Sbjct 966 AAAGATGCTCAGAAGAAGGTTCAGCAA-TCTGATGAAGAAG-CTGCTGGGAAGCTTTTGG 1023
Query 1001 AAGAGAGGGAA 1011
|||||||||||
Sbjct 1024 AAGAGAGGGAA 1034
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39075989925
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5