BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G25520.2 Length=3334 Score E Sequences producing significant alignments: (Bits) Value Ahg489410 jgi|Araly1|489410|fgenesh2_kg.6__2544__AT5G25520.2 2990 0.0 Ahg350338 jgi|Araly1|350338|fgenesh1_pg.C_scaffold_6000931 695 0.0 Ahg481416 jgi|Araly1|481416|fgenesh2_kg.4__476__AT2G25640.1 243 9e-63 > Ahg489410 jgi|Araly1|489410|fgenesh2_kg.6__2544__AT5G25520.2 Length=3370 Score = 2990 bits (1619), Expect = 0.0 Identities = 2008/2186 (92%), Gaps = 65/2186 (3%) Strand=Plus/Plus Query 76 TTTTAGGGTTTCTTCTTCCTTTCGCACATATCTT-CTCCGATTGATTTTGCAGTGAAATT 134 |||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||| || Sbjct 1 TTTTAGGGTTTCCTCTTCCCTTCGCACATATCTTGCTCCGATTGATTTTCCAGTGAACTT 60 Query 135 GT-GTATCTTTTTGTTGTTAATCAGAGCTGTTGAAGTGAATGTTTGGATATAGCTGTGGT 193 || | | |||||||| || |||||||||||||||||||||||||||||| ||||| || Sbjct 61 GTATTTTATTTTTGTT-TTTCTCAGAGCTGTTGAAGTGAATGTTTGGATATCGCTGTTGT 119 Query 194 GGTTTCGTATCATGTCCAGTAATATGGGAACAGAGCTTATTGATCTGGAGACTGTGAAAG 253 ||||| |||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 120 GGTTTAGTATCATGTCCAGTAATATGGGAACAGAGCATATTGATCTGGAGAC------A- 172 Query 254 CGGATTCAGATGCTTTTGGAGAAACGAATTTGATGGAGTTAGTTGGATCAAATGATCCTC 313 || | | ||||||||||||||||| |||| ||| |||| ||||||||||| Sbjct 173 --GA-T---A--CTTTTGGAGAAACGAATCTGATAGAGATAGTAGGATCAAATGA----- 219 Query 314 CTTCTCTTCAGCATATCTCAGTTTCAGAGATTGAGCAAGAGCCTATGGAAATATCTGTCT 373 ||||||||||||||||||||| || || ||||||||| |||||| |||||||| Sbjct 220 -------TCAGCATATCTCAGTTTCAGACATGGAACAAGAGCCTTTGGAAACATCTGTCT 272 Query 374 CTGGTCCTTTGTCATTCCAATTTGAGCCAGAGGCTGTCTCTTTTCAATCATCTATGTTGG 433 ||||||||||| |||||| |||||| || |||| ||||||||||||||| |||||||||| Sbjct 273 CTGGTCCTTTGGCATTCCGATTTGAACCTGAGGATGTCTCTTTTCAATCCTCTATGTTGG 332 Query 434 TTGATACTCAGTCTTTGATGCCTCAGTTGCAA----C--TT-C-CA----TATTCTGTAG 481 ||||||| |||||||||||||||||||||||| | || | || ||||||| || Sbjct 333 TTGATACCCAGTCTTTGATGCCTCAGTTGCAACTTCCTGTTGCACATTCGTATTCTGGAG 392 Query 482 AGAGGTCAGTAGCTGCATGTAGTA-AC-T-CAGTGACAGGGAAGCGGAAATCGCCACCAG 538 |||| || ||| |||||||||||| | | ||| | |||||||||| || || ||||||| Sbjct 393 AGAGTTCTGTATCTGCATGTAGTATCCTTCCAGGGGCAGGGAAGCGTAATTCACCACCAG 452 Query 539 AG--TC--T--ACTCTCAGTGGTTCTGCTACTTCCGAGAAGTTAGATGCATCTAACAAGC 592 || || | |||||| ||||||||||| |||||||||||||||||||| | || | || Sbjct 453 AGTCTCAGTCGACTCTCGGTGGTTCTGCTGCTTCCGAGAAGTTAGATGCACCAAATAGGC 512 Query 593 GAGTAGAGCCAGTGCACCACAGACCATGGCTAGAACAATTTTATTCAGAATGTATTCAGC 652 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 513 GAGTAGAGCCAGTGCATCACAGACCATGGCTAGAACAATTTTATTCAGAAAGTATTGAGC 572 Query 653 GGGGTCATATGCCACCACCTGCTACTCTTTCTACCAAGACAGAACATCTACCAACGCCTG 712 ||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct 573 GGGGTCATATGCCGCCACCTGCTACTCTTTCTCCCAAGACGGAACATCCACCAACGTCTG 632 Query 713 CTAAGAAAGT-AAGGCAAATGGAACCTGCTTCCCAAAAATCTGGGAAGCAAGTGATGAAC 771 |||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 CTAAGAGA-TCAAGGCAAATGGAACCTGCTTCCCAAAAATCTGGGAAGCAAGTGATGAAC 691 Query 772 AAGAAACAAGCAGGCTTGTCACAAGGGTCGGTGAAAACACTGAATGATGGTAACGAGTCT 831 ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 692 AAGAAACAATCAGGCCTGTCACAAGGGTCGGTGAAAACACAGAATGATGGTAACGAGTCT 751 Query 832 TTGAGGTCTAAAATGAAGGAATCATTAGCAGCTGCCTTGGCTTTGGTTCACGAGCATGAG 891 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 TTAAGATCTAAAATGAAGGAATCATTAGCAGCTGCCTTGGCTTTGGTTCACGAGCATGAG 811 Query 892 GAGTCTCCGAAAGAGAAAAAGAATTCAGAAACTGAAGAAGCAAGTGTTCCAGTAGCTGAT 951 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 812 GAATCTCCGAAAGAGAAAAAGAATTCAGAAACTGAAGAAGCAAGTGTTCCAGTAGCTGAA 871 Query 952 AGTAATGAGCCTGCGTCAGCCTG-TGGTACCAGTGTTACAGTAGGTGAAGACATCACGCC 1010 |||||||||||||| |||||| | |||||| ||||||||||||| |||||||||||| || Sbjct 872 AGTAATGAGCCTGCCTCAGCC-GATGGTACTAGTGTTACAGTAGCTGAAGACATCACACC 930 Query 1011 AGCAATGTCCACAAGGGATGAAAGTTTTGAGCAGAAGAACGGCAATGGAAGAACTTTGTC 1070 ||| |||| ||||||||||| ||||||| ||||||||| ||||||||||||| |||||| Sbjct 931 GGCATTGTCAACAAGGGATGATAGTTTTGGGCAGAAGAATGGCAATGGAAGAATTTTGTC 990 Query 1071 GCAAGAGAGTTCCAAGGACACCAAGATGAATTATGTTAATCAATCTGATGTACAGAAAAC 1130 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 991 GCAAGAGAGTTCCAATGACACAAAGATGAATTATGTTAATCAATCTGATGTACAGAAAAC 1050 Query 1131 TCAATTTGACGAGGTTTTCCCCTGTGATGATGTTCGTTTTAGTGATAGTATTTTTACTGG 1190 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1051 TCAATTTGACGAGGTTTTCCCCTGTGATGATGTTCGTTTTAGTGATAGTATTTTTTCTGG 1110 Query 1191 CGATGAACTTTTACAGGGTAATGGCCTCTCATGGGTTTTGGAACCTGTTTCAGATTTTGG 1250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1111 GGATGAACTTTTACAGGGTAATGGCCTCTCATGGGTTTTGGAACCTGTTTCAGATTTTGG 1170 Query 1251 GGAGAATGAAACTCAAAAGTCGTTTGAGGATCCAGAGCTCTTGGCATCTAAAATTGAGTT 1310 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1171 GGAGAATGAACCTCAAAAGTCGTTTGAGGATCCAGAGCTCTTGGCATCTAAAATTGAGTT 1230 Query 1311 GGAACTTTTTAAGCTATTTGGAGGTGTGAACAAGAAGTACAAAGAGAAGGGAAGGTCTCT 1370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1231 GGAACTTTTTAAGCTATTTGGAGGTGTGAACAAGAAGTACAAAGAGAAGGGAAGGTCTCT 1290 Query 1371 CTTATTCAATTTGAAGGATAAGAACAATCCTGAGCTAAGAGAAAGTGTCATGTCCGGAAA 1430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1291 CTTATTCAATTTGAAGGATAAGAACAATCCTGAGCTAAGAGAAAGTGTCATGTCCGGAAA 1350 Query 1431 GATATCTCCAGAGAGATTATGTAATATGACAGCTGAGGAACTTGCTTCTAAGGAGCTTTC 1490 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1351 GATATCTCCAGAGAGATTGTGTAATATGACAGCTGAGGAACTTGCTTCTAAGGAGCTTTC 1410 Query 1491 TCAGTGGCGACAAGCAAAAGCAGAAGAGATGGCGGAGATGGTTGTCCTACGGGACACAGA 1550 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 1411 TCAGTGGCGACAAGCAAAAGCAGAAGAGATGGCGGAGATGGTTGTCCTGCGGGATGCAGA 1470 Query 1551 CATTGATGTCAGAAATCTGGTGAGGAAAACGCATAAAGGTGAGTTCCAGGTAGAAATTGA 1610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1471 CATTGATGTCAGAAATCTGGTGAGGAAAACGCATAAAGGTGAGTTCCAGGTAGAAATTGA 1530 Query 1611 TCCCGTTGACAGTGGGACAGTGGATGTCTCTGCTGAGATTACATCAAATAGTAAACCTCG 1670 ||| ||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||| Sbjct 1531 TCCTGTTGATAGTGGGACAGTGGATGTGTCTGCTGAGATTACCTCACATAGTAAACCTCG 1590 Query 1671 AGCCAAAGCAAAATCCTCGAAATCATCTACCAAAGCCACTTTAAAGAAAAATGACTCTAA 1730 |||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||| || Sbjct 1591 AGCCAAAGCAAAATCCGCAAAATCATCTACCAAATCCACTTTAAAGAAAAATGGCTCGAA 1650 Query 1731 TGATAAGAACATAAAA-TCCAACCAGGGAACATCATCTGCTGTGACTCTGCCCCCAACAG 1789 |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct 1651 TGATAAGAACATAAAACTC-AACCAGGGAACATCATCTGCTATGACTCTGCCCCCAACAG 1709 Query 1790 AGGAGATTGATCCGATGCAAGGTCTGTCAATGGATGATGAGATGAAGGATGTGGGATTTC 1849 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1710 AGGAGATTGATCCAATGCATGGTCTGTCAATGGATGATGAGATGAAGGATGTGGGTTTTC 1769 Query 1850 TTCCTCCAATTGTATCCCTTGATGAGTTCATGGAATCCCTGAACTCAGAACCTCCATTTG 1909 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1770 TTCCTCCAATTGTATCGCTTGATGAGTTCATGGAATCCCTGAACTCAGAACCTCCATTTG 1829 Query 1910 GCAGTCCACATGAACATCCTCCTGGAAAGGAAGATCCTGCATCTGAGAAGAGTGACTCTA 1969 ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 1830 GCAGTCCACATGAGCATCCTCCTGTAAAGGAAGAGCCTGCATCTGAGAAGAGTGACTCTA 1889 Query 1970 AAGATGGGTCACATTCAAAATCACCTTCAAGATCTCCTAAGCAGTCTCCAAAGGAACCGA 2029 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct 1890 AAGATGGGTCACATTCAAAATCACCTTCAAGATCTCCAAAACAGTCTCCAAAGGAACCCA 1949 Query 2030 GTGAGAGCGTCTCTTCTAAAACAGAACTCGAAAA-GACTAATGTAATTTCCCCAAAACCT 2088 ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| | Sbjct 1950 GTGAGAGCGTCTCTTCTAAAACAGAACTC-AAAATGACTAATGTAACTTCCCCAAAAC-T 2007 Query 2089 G-ATGCTGGTGACCAACTCGACGGTGATGTCTCCAAACCTGAA-AA-TACATCTTTGGTT 2145 | ||||||||| | |||||||| ||||||||| ||||||||| || ||| | ||||||| Sbjct 2008 GGATGCTGGTGTCAAACTCGACACTGATGTCTCTAAACCTGAAGAAATAC-T-TTTGGTT 2065 Query 2146 GATAGCATTAAAGAGGATCGAATATGGGATGGTATATTGCAGCTTAGTTCCGCTTCAGTT 2205 |||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 2066 GATAACATTAAAGAGGACCGAATATGGGATGGTATACTGCAGCTTAGTGCCGCTTCCGTT 2125 Query 2206 GTCTCAGTCACTGGAATTTTCAAGAG 2231 |||||||||||||||||||||||||| Sbjct 2126 GTCTCAGTCACTGGAATTTTCAAGAG 2151 Score = 1432 bits (775), Expect = 0.0 Identities = 1026/1141 (90%), Gaps = 42/1141 (4%) Strand=Plus/Plus Query 2232 TGGTGAGAAAGCAAAGACAAGCGAGTGGCCAACAATGGTGGAGGTAAAGGGTAGAGTGAG 2291 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2233 TGGTGAGAAAGCAAAGACAGGCGAGTGGCCAACAATGGTGGAGGTAAAGGGTAGAGTGAG 2292 Query 2292 ACTCAGTGCGTTTGGGAAGTTTGTAAAAGAGCTTCCGTTGTCTCGAAGCCGTGTCTTAAT 2351 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2293 ACTCAGCGCGTTTGGGAAGTTTGTAAAAGAGCTTCCGTTGTCTCGAAGCCGTGTCTTAAT 2352 Query 2352 GGTAATGAACGTGGTTTGCAAGAATGGTATCTCTCAGAGCCAACGTGATAGCCTAATTGA 2411 |||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| Sbjct 2353 GGTAATGAACGTGGTTTGCAAGGATGGTATCTCTCAGAGCCAACGTGATAGTCTTTTTGA 2412 Query 2412 GGTTGCTAAGTCATACGTAGCTGACCAAAGAGTTGGTTACGCAGAACCAACCTCGGGCGT 2471 |||| ||||||| |||||||||||||||||||||||||| ||||| ||||| || ||||| Sbjct 2413 GGTTACTAAGTCGTACGTAGCTGACCAAAGAGTTGGTTATGCAGAGCCAACGTCAGGCGT 2472 Query 2472 TGAGCTTTACCTCTGTCCAACACTG-GGTGAAAC-CTTGGATTTGTTGAGCAAAATCATC 2529 ||||||||||||||||||| ||| | ||||||| |||| | |||||||||||||||||| Sbjct 2473 TGAGCTTTACCTCTGTCCACCAC-GCGGTGAAATACTTG-AGTTGTTGAGCAAAATCATC 2530 Query 2530 TCCAAGGATTATCTTGATGAGGTCAAGTGTTCAGAAGATATCGGGTTGATTGGTGTTGTT 2589 || ||||| ||||||||||||||||||||||||| | |||||||||||| ||||||||| Sbjct 2531 TCAAAGGACCATCTTGATGAGGTCAAGTGTTCAGAGGTTATCGGGTTGATCGGTGTTGTT 2590 Query 2590 GTGTGGAGGCGTGCAGTTGTCGCGTCTCCTGGCTCACGCCATAAGCCGGGATTCAAACGT 2649 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 2591 GTGTGGAGGCGTGCAGTTGTCGCGTCTCCTGGCTCACGACATAAGCCTGGATTCAAACGT 2650 Query 2650 CAGCATTCTTCTACAGGCACTAAGAGGTCTGTATTGGCTCCAGAAAACCAAAAGTCTAGA 2709 |||||||||||| | || |||||| |||||| ||||||||||||||| ||||||| || Sbjct 2651 CAGCATTCTTCTTCTGGTGCTAAGAAGTCTGTGTTGGCTCCAGAAAACAAAAAGTCCAGT 2710 Query 2710 AGTGTGAGTGTTACGAATCCTTC---TGTTGTAAATGTTGAATCCATGAGGAATCATGGT 2766 |||||| |||||||||||| | |||||||||||||| ||||||||||||||||||| Sbjct 2711 GGTGTGAATGTTACGAATCCGCCGCCTGTTGTAAATGTTGCATCCATGAGGAATCATGGT 2770 Query 2767 TTGGTTGGTTGTGATGATGATGATGAAGACATGCCTCCTGGATTTGGTCCTGTAGCTGCG 2826 |||||||||| |||| |||||||||||||| |||| |||||||||||||| ||||||||| Sbjct 2771 TTGGTTGGTTTTGATAATGATGATGAAGACGTGCCACCTGGATTTGGTCCCGTAGCTGCG 2830 Query 2827 AAAGATGACGATGATTTACCGGAATTTAACTTTAATTCCTCCAGTGGACCGGTTACTTCT 2886 ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| Sbjct 2831 AAAGATGACGATGATTTGCCAGAATTTAACTTCAATTCCTCCAGTGGACCAGTTACTTCT 2890 Query 2887 TCTCCTCGACCACCGT-TGCAGTCCCGGTCTTTGGATCAAGTAAGGGAGCTCATACTCAA 2945 ||||||| ||||||| | ||||| |||||| |||| ||||||||||||||||| || || Sbjct 2891 TCTCCTCAACCACCGCCT-CAGTCTCGGTCTATGGAGCAAGTAAGGGAGCTCATTCTTAA 2949 Query 2946 GTATGGAAATTCAACAGGTAGTGGTAGTAAACGACCATGGGATGGTCATGATGATGATGA 3005 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2950 ATATGGAAATTCAGCAGGTAGTGGTAGTAAACGACCATGGGATGGTCATGAGGATGATGA 3009 Query 3006 TGACGACGACATTCCTGAATGGCAACCGCAA--C-------------T------GCCACC 3044 ||||| |||||||||||||||||||||||| | | |||||| Sbjct 3010 CGACGATGACATTCCTGAATGGCAACCGCAAGTCACAGGCCACCAAGTTCAACTGCCACC 3069 Query 3045 ACCACCTCCTGACTTGAGTCCTCAATTTCATAGCGGAACCATGGCCAGACCACCAGCACA 3104 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 3070 ACCACCTCCTGACTTGAGTCCTCAATTTCATAGCAGAACCATGGCTAGACCACCAGCACA 3129 Query 3105 ACGAC--C-TGTTGCGGGACCACCGAGTGGATGGAAGGCCAATCAAAACGCACCTAGGCA 3161 || || | ||||||||||||| ||||||||||||||||| |||||||| ||||||| || Sbjct 3130 ACAACAACCTGTTGCGGGACCATCGAGTGGATGGAAGGCCTATCAAAACACACCTAGACA 3189 Query 3162 ACAACAGTACAGTGCACGTAGGAACAGAGGATTTTGATCTTTGTGAATACGTTTGTGTAA 3221 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 3190 ACAACAGTACAGTGCACGTAGAAACAGAGGATTTTGATCTTTGTGAATGCGTTTGTGTAA 3249 Query 3222 TTAAAGTTTGTTAGGTCTATTGACGTCTCTATCATCGGCTTTTA---------AGTGTTT 3272 |||||||||||||||| ||||||| ||||||||||| |||||| ||||||| Sbjct 3250 TTAAAGTTTGTTAGGTGTATTGACTTCTCTATCATCAGCTTTTTTTGTTTTGTAGTGTTT 3309 Query 3273 CTATAGAATTGTAAACCTTTGAATAATGGAGTCTTTTAAGCATAAAAGTTTGAACTCAAC 3332 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3310 CAATAGAATTGTAAACCTTTGAATAATGGAGTCTTTTAAGCATAAAAGTTTGAATTCAAC 3369 Query 3333 A 3333 | Sbjct 3370 A 3370 > Ahg350338 jgi|Araly1|350338|fgenesh1_pg.C_scaffold_6000931 Length=2460 Score = 695 bits (376), Expect = 0.0 Identities = 1049/1361 (77%), Gaps = 98/1361 (7%) Strand=Plus/Plus Query 1265 AAAAGTCGTTTGAGGATCCAGAGCTCTTGGCATCTAAAATTGAGTTGGAACTTTTTAAGC 1324 ||||||| | | |||||||| | || ||||||||||||||||| ||||||| | ||||| Sbjct 584 AAAAGTCATATCAGGATCCAAAACTTTTGGCATCTAAAATTGAAATGGAACTGTATAAGC 643 Query 1325 TATTTGGAGGTGTGAACAAGAAGTACAAAGAGAAGGGAAGGTCTCTCTTATTCAATTTGA 1384 ||||||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||| Sbjct 644 TATTTGGAGGTGTGAACAAAAAGTACAGAGAGAGGGGAAGGTCCCTCTTATTCAATTTGA 703 Query 1385 AGGATAAGAACAATCCTGAGCTAAGAGAAAGTGTCATGTCCGGAA-AGATATCTCCAGAG 1443 ||||||||||||||||||| ||||||||||| || ||||| |||| | || ||| | ||| Sbjct 704 AGGATAAGAACAATCCTGATCTAAGAGAAAGAGTTATGTC-GGAAGAAATTTCTGCTGAG 762 Query 1444 AGATTATGTAATATGACAGCTGAGGAACTTG-CTTCTAAGGAGCTTTCTCAGTGGCGACA 1502 || || ||| ||||||||| || ||| ||| ||||||||||||||||||||||||| || Sbjct 763 AGGTTGTGTTCTATGACAGCCGAAGAA-TTGGCTTCTAAGGAGCTTTCTCAGTGGCGTCA 821 Query 1503 AGCAAAAGCAGAAGAGATGGCGGAGATGGTTGTCCTACGGGACACAGACATTGATGTCAG 1562 ||| ||||| ||||||||||| ||||||||||||| | ||| ||||| ||||||||||| Sbjct 822 AGCCAAAGCTGAAGAGATGGCAAAGATGGTTGTCCTGCAGGATACAGATATTGATGTCAG 881 Query 1563 AAATCTGGTGAGGAAAACGCATAAAGGTGAGTTCCAGGTAGAAATTGATCCCGTTGACAG 1622 || ||||||||||||||| ||||| ||||| |||||||| || ||||| || |||||||| Sbjct 882 AAGTCTGGTGAGGAAAACACATAAGGGTGAATTCCAGGTTGAGATTGAACCAGTTGACAG 941 Query 1623 TGGG-ACAGTGGATGTCTCTGCTGAG-ATTACATCAAATAGTAAAC-CTCGAGCCAAAGC 1679 ||| || || |||||||||| || | || | ||| ||| |||| | ||| ||||||| Sbjct 942 -GGGCACGGTAGATGTCTCTGGTG-GCATCATGTCACGTAGCAAACGC-CGACCCAAAGC 998 Query 1680 AAAATCCTCGAAATCATCTACCAAAGCCACTTT-AAAGAAAAATGACTCTAATGATAAGA 1738 ||||| || | || | | | ||| ||||| | ||||| ||| | | | ||| Sbjct 999 CAAATC-TC-AT-TC-TGT-CAAAA-CCACTCTCAAAGA----TGAGGC-AGCAA-AAGC 1046 Query 1739 ACATAAAATCCAACCAGGGAACATCATCTGCTGTGACTC-TGCCCCCAACAGAGGAGATT 1797 ||| | || | || ||| | ||| |||| | ||| |||| || ||||| Sbjct 1047 TGATAG--TG-AA--A---AA--TCA-C-GCTCA-ACTCCT-CCCTCAACTGAAGAGATC 1092 Query 1798 GATCCGATGCAAGGTCTGTCAATGGATGATGAGAT-GAAGGATGTGGGATTTCTTCCTCC 1856 ||||| ||||||||| || || |||||||| || |||||| ||||| ||||||||||| Sbjct 1093 GATCCCATGCAAGGTTTGGGGATCGATGATGA-ATTGAAGGACGTGGGGTTTCTTCCTCC 1151 Query 1857 AATTGTATCCCTTGATGAGTTCATGGAATCCCT-GAACTCAGAACCTCCATTTGGCAGTC 1915 ||||||||| |||||||| ||||||||||| || || ||| || |||||||||| |||| Sbjct 1152 AATTGTATCACTTGATGAATTCATGGAATCTCTAGA-CTCTGAGCCTCCATTTGAAAGTC 1210 Query 1916 CACATGA-ACATCCTCCTGGAAAGGAAGATC-CTGCATCTGAGAAGAGTGACTCTAAAGA 1973 | |||| | || || || ||| | || | || | |||||||| ||||| ||| ||| Sbjct 1211 CGCATGGTA-AT--TC-TG-AAATGCAGGTGTCTCCGTCTGAGAAAAGTGATTCTGAAGC 1265 Query 1974 TGGGTCACATTCAAAATCACCTTCAAG-ATCTCCTAAGCAGTCTCCAAAGGAACCGAGTG 2032 ||||||| | |||||||| ||| ||| |||||||||| | | | || | || | Sbjct 1266 TGGGTCAGACTCAAAATCTCCTA-AAGGATCTCCTAAGGAA-C-C-AA-GT----GA-TA 1315 Query 2033 AGAGCGTCTCTTC-TAAAACAGAACTC-GAAAAGACTAATGTAATT-TCCCCAAAACCTG 2089 | || | | | | | || || ||| | ||||||| | ||| || | ||||| || || Sbjct 1316 AAAG--T-T-TGCCTGAACCAAAAC-CAGAAAAGATTGATG-AAGTGTCCCCGAAGGTTG 1369 Query 2090 ATGCTGGTGACCAACTCGACGGTGATGTCTCCAAACCTGA-AAATACATCT----TTGGT 2144 |||| | | || | || | |||||| | | || ||| ||| |||||| || || Sbjct 1370 ATGCCAACGTCAAAGTTGATGACGATGTCGCTAGACTTGAGAAA-ACATCTGCACTTAGT 1428 Query 2145 TGATAGCATTAAAG-AGGATCGAATATGGGATGGTATATTGCAGCTTAGT-TCCGCTTCA 2202 ||| | || || | || | || ||||||||| ||| |||| || ||| | |||| Sbjct 1429 -GAT-G-AT-AAGGGAGAAA-GAGCATGGGATGGAATACTGCAACTGAGTATGT-CTTCC 1482 Query 2203 GTTGTCTCAGTCACTGGAATTTTCAAGAGTGGTGAGAAAGCAAAGACAAGCGAGTGGCCA 2262 || ||| | |||||||| |||||||| ||||||||||||||| |||| ||||||||||| Sbjct 1483 GTAGTCCCTGTCACTGGCATTTTCAAAAGTGGTGAGAAAGCAGAGACGAGCGAGTGGCCG 1542 Query 2263 ACAATGGTGGAGGTAAAGGGTAGAGTGAGACTCAGTGCGTTTGGGAAGTTTGTAAAAGAG 2322 | |||||||| || ||||||||||| || || |||| ||||||||||||| | ||||| Sbjct 1543 GCGATGGTGGAAGTTAAGGGTAGAGTTAGGCTAAGTGGGTTTGGGAAGTTTATTCAAGAG 1602 Query 2323 CTTCCGTT-GTCTCGAAGCCGTGTCTTAATGGTAATGAACGTGGTTTGCAA-GAATGGTA 2380 ||||| | |||||||| ||||| | ||||||||||| || ||| ||| || || || | Sbjct 1603 CTTCC-TAAGTCTCGAACCCGTGCCCTAATGGTAATGTACTTGGCTTGTAAAGAC-GGCA 1660 Query 2381 TCTCTCAGAGCCAACGTG-ATAGCCTAATTGAGGTTGCTAAGTCATACGTAGCTGACCAA 2439 | ||| ||||||| |||| | ||||| ||||||||| | | || ||||| ||||| || Sbjct 1661 TTTCTGAGAGCCAGCGTGGA-AGCCTTATTGAGGTTATTGATTCCTACGTTGCTGATCAG 1719 Query 2440 AGAGTTGGTTACGCAGAACCAACCTCGGGCGTTGAGCTTTACCTCTGTCCAACAC-TGGG 2498 |||||||| |||||||| ||| |||| || || ||||||||||| || ||||||| ||| Sbjct 1720 AGAGTTGGCTACGCAGAGCCAGCCTCAGGAGTGGAGCTTTACCTTTGCCCAACACGTGGC 1779 Query 2499 TGAAAC-CTTGGATTTGTTGAGCAAAATCATCTC-CAAGGATTATCTTGATGAGGTCAAG 2556 || || || ||||||| | |||||| ||||||| |||| | | || |||||||||||| Sbjct 1780 -GAGACTCT-GGATTTGCTAAGCAAAGTCATCTCTCAAGAAC-AGCTCGATGAGGTCAAG 1836 Query 2557 TGTTCAGAAGATATCGGGTTGATTGGTGTTGTTGTGTGGAG 2597 | || | ||||| || ||| |||| |||||||||||||| Sbjct 1837 TCTTT-G--GATATTGGATTGGTTGGAGTTGTTGTGTGGAG 1874 > Ahg481416 jgi|Araly1|481416|fgenesh2_kg.4__476__AT2G25640.1 Length=2241 Score = 243 bits (131), Expect = 9e-63 Identities = 291/369 (79%), Gaps = 8/369 (2%) Strand=Plus/Plus Query 1278 GGATCCA-GAGCTCTTGGCATCTAAAATTGAGTTGGAACTTTTTAAGCTATTTGGAGGTG 1336 ||||||| || | ||||||| | |||| ||| ||||| |||||| ||||||| |||| Sbjct 1050 GGATCCACAAG-TTTTGGCATTTGAAATAGAGGCAGAACTGTTTAAGTTATTTGGTGGTG 1108 Query 1337 TGAACAAGAAGTACAAAGAGAAGGGAAGGTCTCTCTTATTCAATTTGAAGGATAAGAACA 1396 |||| ||||| || |||||||| |||||||||||||| ||||||||||| || |||| | Sbjct 1109 TGAATAAGAAATATAAAGAGAAAGGAAGGTCTCTCTTGTTCAATTTGAAAGACAAGAGTA 1168 Query 1397 ATCCTGAGCTAAGAG-AAAGTGTCATGTCCGGA-AAGATAT-CTCCAGAGAGATTATGTA 1453 ||||| | || || | |||| || |||| ||| || || | | ||||| |||| ||| Sbjct 1169 ATCCTAAACTCAGGGAAAAG-GTTATGTATGGAGAA-AT-TGCAGCAGAGCGATTGTGTT 1225 Query 1454 ATATGACAGCTGAGGAACTTGCTTCTAAGGAGCTTTCTCAGTGGCGACAAGCAAAAGCAG 1513 ||| |||| || ||||||||||| ||||| || || ||||||||||||||||||||| Sbjct 1226 CCATGTCAGCAGAAGAACTTGCTTCAAAGGAACTAGCTGAGTGGCGACAAGCAAAAGCAG 1285 Query 1514 AAGAGATGGCGGAGATGGTTGTCCTACGGGACACAGACATTGATGTCAGAAATCTGGTGA 1573 |||||||||| |||||||||| || | ||||||||| | ||| |||||| || || | Sbjct 1286 AAGAGATGGCTCAGATGGTTGTTCTGCAGGACACAGAGGTGGATATCAGAAGCCTAGTAA 1345 Query 1574 GGAAAACGCATAAAGGTGAGTTCCAGGTAGAAATTGATCCCGTTGACAGTGGGACAGTGG 1633 ||||||| || ||||| |||||||| || ||| |||| || | || ||||| |||| | Sbjct 1346 GGAAAACACACAAAGGAGAGTTCCAAGTGGAAGTTGAACCAATGGATAGTGGCTCAGTAG 1405 Query 1634 ATGTCTCTG 1642 | ||||||| Sbjct 1406 AGGTCTCTG 1414 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 125856393911 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5