BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G25930.1 Length=3269 Score E Sequences producing significant alignments: (Bits) Value Ahg489442 jgi|Araly1|489442|fgenesh2_kg.6__2576__AT5G25930.1 4795 0.0 Ahg894518 jgi|Araly1|894518|Al_scaffold_0006_2514 1173 0.0 > Ahg489442 jgi|Araly1|489442|fgenesh2_kg.6__2576__AT5G25930.1 Length=3228 Score = 4795 bits (2596), Expect = 0.0 Identities = 2999/3196 (94%), Gaps = 17/3196 (1%) Strand=Plus/Plus Query 5 TTTGTATCCATTTCACATTCACAGTCAAACTCGGTTGCCGAAGAAATTTCCCGGCAAAAC 64 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTTGTATCCGTTTCACATTCACAGTCAAACTCGGTTGCCGAAGAAATTTCCCGGCAAAAC 60 Query 65 CTCAACAAACAAAAATTAGAGAATGACTCGTT-TACCCTTACCTTTCCTTTTCTTCTTCC 123 |||||||||||||| ||| |||||||| | || |||||||||||||||| |||||||||| Sbjct 61 CTCAACAAACAAAACTTAAAGAATGAC-CCTTCTACCCTTACCTTTCCTCTTCTTCTTCC 119 Query 124 TCACGTCAATACCCTTATCTGTCTTTTCGCAGTTCAACGACCAGTCAACGCTTCTGAACC 183 |||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||| Sbjct 120 TCACATCAATACCCTTATCCGTCTTTTCCCAGTCCAACGACCAGTCAACGCTTCTGAACG 179 Query 184 TGAAACGCGATCTCGGAGATCCACCGTCTCTCCGGCTGTGGAACAACACATCTTCACCGT 243 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 180 TGAAACGCGATCTCGGAGATCCACCGTCTCTCCAACTATGGAACAACACATCTTCACCGT 239 Query 244 GCAACTGGTCGGAGATCACTTGCACCGCCGGAAATGTCACCGGGATCAATTTCAAGAACC 303 |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 240 GCAATTGGTCGGAGATCACTTGCACCGCCGGGAATGTCACTGGGATCAATTTCAAGAACC 299 Query 304 AGAACTTCACTGGGACAGTTCCAACGACGATATGCGATTTGTCGAATCTCAATTTCCTTG 363 |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| | Sbjct 300 AGAACTTCACCGGGACAGTTCCGACGACGATATGCGATTTGTCTAATCTCAATTTCCTCG 359 Query 364 ACTTATCGTTTAATTACTTCGCCGGCGAGTTTCCGACGGTTCTTTACAATTGCACGAAGC 423 | || |||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 360 ATTTGTCGTTTAATTACTTCGCCGGTGAGTTTCCGACGGTTCTTTACAATTGCACGAAAC 419 Query 424 TTCAATATCTCGATCTCTCTCAGAACCTTCTCAACGGCTCACTTCCCGTCGACATCGACC 483 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 420 TTCAATATCTCGATCTCTCTCAGAACCTTTTCAACGGCTCACTTCCCGTCGACATCGACC 479 Query 484 GTCTCTCACCGGAACTCGACTATCTCGACTTAGCTGCTAACGGATTCTCCGGCGATATCC 543 |||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||| Sbjct 480 GTCTCTCACCGGAACTCGACTATCTCGACTTAGCAGCTAACGCCTTCGCCGGAGATATCC 539 Query 544 CTAA-AAGTCTCGGACGGATCTCGAAGCTCAAGGTATTGAATCTGTACCAGAGCGAATAC 602 |||| || | |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 540 CTAAGAA-TATCGGACGGATCTCGAAGCTCAAGGTATTGAATCTCTACCAGAGCGAATAC 598 Query 603 GACGGTACGTTTCCATCGGAGATCGGAGACTT-ATCGGAGCTTGAAGAACTTCGACTAGC 661 |||||| ||||||| |||||||||||||||| || |||||||||||||||||| |||| Sbjct 599 GACGGTTCGTTTCCGCCGGAGATCGGAGACTTGGTC-GAGCTTGAAGAACTTCGATTAGC 657 Query 662 GTTAAACGATAAGTTTACTCCGGCTAAGATTCCGATAGAGTTTGGGAAGTTGAAGAAACT 721 |||||||||||||||||| ||||| || ||||||| ||||||||||| ||||||||||| Sbjct 658 GTTAAACGATAAGTTTACGCCGGCGAAAATTCCGACGGAGTTTGGGAAATTGAAGAAACT 717 Query 722 CAAGTATATGTGGTTAGAGGAGATGAATTTGATCGGAGAAATCTCACCCGTTGTTTTCGA 781 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 718 GAAGTATATGTGGTTAGAGGAGATGAATTTGATCGGAGAAATCTCAGCCGTTGTTTTCGA 777 Query 782 AAACATGACGGATCTTGAGCACGTTGACTTATCGGTCAATAACTTAACGGGTCGGATCCC 841 |||||||||||||||| | |||||||||||||||||||| || ||||||||||||||||| Sbjct 778 AAACATGACGGATCTTAAACACGTTGACTTATCGGTCAACAATTTAACGGGTCGGATCCC 837 Query 842 AGATGTTTTATTCGGGTTGAAGAATCTCACCGAGTTTTATCTCTTCGCTAATGGCTTAAC 901 |||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||| Sbjct 838 AGATGTTTTATTCGGGTTGAAGAACCTCACCGAGCTTTATCTCTACGCTAATGACTTAAC 897 Query 902 CGGAGAAATCCCCAAATCAATTTCGGCGACGAACTTGGTATTTCTTGATCTCTCTGCTAA 961 ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 898 CGGTGAAATCCCCAAATCTATTTCGGCGACGAACATGGTATTTCTTGATCTCTCCGCTAA 957 Query 962 TAATTTAACCGGTTCGATTCCGGTATCAATCGGAAATCTAACGAAATTACAAGTGTTAAA 1021 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 TAATTTAACCGGTTCGATTCCGGTATCAATCGGAAATCTAACGAAATTACAAGTGTTAAA 1017 Query 1022 CCTCTTCAACAACAAGTTAACCGGAGAAATTCCACCGGTTATCGGAAAACTACCGGGATT 1081 ||| || |||||| |||||||||||||||| || ||||||||||||||| |||||| ||| Sbjct 1018 CCTGTTTAACAACGAGTTAACCGGAGAAATCCCGCCGGTTATCGGAAAATTACCGGAATT 1077 Query 1082 GAAGGAGTTTAAAATCTTCAACAACAAGTTAACCGGAGAAATACCTGCAGAGATTGGAGT 1141 ||||||||| || ||||||| |||||||||||||||||||||||| || ||| ||||||| Sbjct 1078 GAAGGAGTTGAAGATCTTCACCAACAAGTTAACCGGAGAAATACCGGCGGAGTTTGGAGT 1137 Query 1142 TCATTCAAAGCTGGAGAGATTCGAAGTTTCGGAGAATCAGTTAACCGGAAAGTTACCGGA 1201 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 TTATTCAAAGCTGGAGAGATTCGAAGTTTCGGAGAATCAGTTAACCGGAAAGTTACCGGA 1197 Query 1202 AAATTTGTGCAAAGGTGGTAAACTTCAAGGAGTGGTTGTGTACTCAAACAATCTTACCGG 1261 || ||| |||||| | |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1198 AAGTTTATGCAAAAGAGGTAAACTTCAAGGCGTGGTTGTGTACTCAAACAATCTCACCGG 1257 Query 1262 AGAAATCCCTGAGTCGCTCGGAGATTGTGGAACGCTCTTGACTGTTCAGTTACAGAACAA 1321 ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1258 AGAAATCCCGGAGTCTCTCGGAGATTGTGGAACGCTCTTGACGGTTCAGTTACAGAACAA 1317 Query 1322 TGACTTCTCCGGCAAGTTTCCTTCTCGGATCTGGAATGCTTCAAGTATGTATAGTCTACA 1381 || ||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| Sbjct 1318 TGGCTTCTCCGGCAAGTTTCCTTCTCGGATTTGGACTGCTTCAAGTATGTATAGTTTACA 1377 Query 1382 GGTGAGTAACAACTCATTCACCGGAGAGTTACCGGAGAATGTTGCTTGGAATATGTCGAG 1441 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 1378 GGTGAGTAACAACTCATTCACCGGAGAATTACCGGAGAATGTCGCTTGGAATATGTCGAG 1437 Query 1442 GATCGAGATTGATAACAATCGATTTTCCGGTGAGATTCCGAAGAAAATCGGTACTTGGTC 1501 |||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| Sbjct 1438 GATCGAGATTGATAACAATCGATTTTACGGTGTGATTCCTCGGAAAATCGGTACTTGGTC 1497 Query 1502 TTCCTTAGTTGAGTTTAAGGCGGGAAACAATCAGTTTTCTGGTGAGTTTCCGAAGGAATT 1561 ||| |||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 1498 TTCTTTAGTTGAGTTTAAGGCGGGAAACAATCGGTTTTCCGGTGAGATTCCGAAGGAATT 1557 Query 1562 GACTTCTCTTTCGAATCTCATATCGATCTTTCTCGATGAGAATGATCTCACCGGTGAATT 1621 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1558 GACTTCTCTTTCGAATCTTTTATCGATCTTTCTCGATGAGAATGATCTCACCGGTGAATT 1617 Query 1622 ACCGGATGAGATCATCTCATGGAAGTCGTTGATAACGTTAAGTTTATCCAAGAACAAGCT 1681 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1618 ACCGGATGATATCATCTCATGGAAGTCGTTGATAACGTTAAGTTTATCCAAGAATAAGCT 1677 Query 1682 TTCCGGGGAA-ATTCCGAGAGCTTTAGGATTGTTGCCACGTCTGCTCAATCTTGATCTAT 1740 || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1678 TT-CGGGGAAGATTCCGAGAGCTTTAGGATTGTTGCCACGTTTGCTCAATCTTGATCTAT 1736 Query 1741 CGGAGAATCAATTCTCCGGTGGAATCCCACCGGAGATTGGGAGCCTGAAGCTGACAACAT 1800 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1737 CGGAGAATCAATTCTCCGGTGGAATCCCACCGGAGATCGGGAGTTTGAAGCTGACAACAC 1796 Query 1801 TTAATGTGTCATCAAATAGACTCACTGGAGGAATACCAGAGCAACTTGATAATCTTGCTT 1860 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 1797 TTAATGTGTCATCAAATAGACTCACCGGAGGAATCCCAGAGCAACTTGATAATCTTGCTT 1856 Query 1861 ACGAGAGAAGTTTCTTGAACAACTCTAATCTTTGTGCAGACAACCCGGTTCTCAGCTTAC 1920 ||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||| Sbjct 1857 ACGAGAGAAGTTTCTTGAACAACTCCAATCTTTGTGCAGACAAGCCAGTTCTCAATTTAC 1916 Query 1921 CGGATTGTCGGAAACAGCGCCGGGGATCAAGAGGGTTCCCCGGGAAAATCCTCGCGATGA 1980 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 1917 CGGATTGTCGGAAACAGCGCCGGGGATCAAGAGGGTTGCCGGGGAAAATCCTCGCGATGA 1976 Query 1981 TTCTAGTCATCGCGGTTCTGCTTCTCACCATTACTCTGTTTGTTACGTTCTTTGTGGTTA 2040 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| || Sbjct 1977 TTCTAGTCATCGCTGTTCTGCTTCTCACTATTACTCTGTTTGTTACGTTCTTTGTGATTC 2036 Query 2041 GGGACTACACAAGGAAACAAAGAAGAAGAGGTCTAGAGACGTGGAAACTCACTTCATTTC 2100 | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 2037 GAGATTACACAAGGAAACAAAGAAGGAGAGGTCTAGAGACGTGGAAACTAACTTCATTTC 2096 Query 2101 ATAGAGTAGATTTTGCGGAATCCGACATCGTGTCGAATCTGATGGAACACTACGTGATCG 2160 ||||||| |||||||||||||| || || ||||||||||||||||||||||| ||||||| Sbjct 2097 ATAGAGTTGATTTTGCGGAATCTGATATAGTGTCGAATCTGATGGAACACTATGTGATCG 2156 Query 2161 GTAGTGGCGGATCGGGCAAAGTTTACAAGATTTTCGTCGAAAGCTCGGGACAATGTGTGG 2220 | |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| Sbjct 2157 GGAGTGGCGGATCGGGAAAAGTTTACAAGATATTCGTCGAAAGCTCGGGACAATGCGTGG 2216 Query 2221 CAGTGAAGAGGATATGGGACAGCAAGAAACTGGACCAGAAACTTGAGAAGGAGTTTATTG 2280 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2217 CGGTGAAGAGAATCTGGGACAGCAAGAAACTGGACCAGAAACTTGAGAAGGAGTTTATTG 2276 Query 2281 CTGAAGTTGAGATTCTTGGAACGATCAGGCACTCGAATATAGTGAAACTATTGTGTTGTA 2340 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 2277 CTGAAGTTGAGATTCTTGGAACGATCAGGCACTCGAATATCGTGAAACTACTGTGTTGTA 2336 Query 2341 TCTCAAGGGAAGATTCAAAGCTTCTAGTGTATGAGTATCTCGAGAAACGCAGTCTTGATC 2400 |||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 2337 TCTCGAGGGAGGATTCAAAGCTTCTGGTGTACGAGTATCTCGAGAAACGCAGTCTTGATC 2396 Query 2401 AATGGTTACATGGAAAGAAGAAGGGAGGTACCGTAGAGGCTAATAACCTTACATGGTCAC 2460 ||||| ||||||| ||||||||| ||||||| || || ||||||||||| |||||| ||| Sbjct 2397 AATGGCTACATGGCAAGAAGAAGAGAGGTACTGTTGATGCTAATAACCTGACATGGCCAC 2456 Query 2461 AGAGGTTGAATATCGCAGTTGGAGCAGCTCAAGGACTTTGCTATATGCATCATGATTGTA 2520 | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 2457 AAAGGTTGAATATCGCGGTTGGAGCAGCTCAAGGACTTTGCTATATGCATCACGATTGCA 2516 Query 2521 CTCCCGCAATCATACATAGAGATGTCAAGTCGAGTAACATCTTGCTTGATTCTGAATTCA 2580 ||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct 2517 CTCCCGCGATCATACACAGAGATGTTAAGTCAAGTAACATCTTGCTTGATTCTGAATTCA 2576 Query 2581 ACGCGAAGATTGCAGATTTCGGGTTGGCTAAACTGTTGATTAAGCAAAACCAAGAACCTC 2640 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 2577 ACGCGAAGATTGCAGATTTCGGGTTGGCCAAACTGTTGATTAAGCAAAACCAACAACCTC 2636 Query 2641 ATACCATGTCAGCTGTTGCTGGATCCTTTGGTTACATTGCTCCAGAATACGCATATACGT 2700 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 2637 ATACCATGTCAGCTGTTGCTGGATCCTTCGGTTACATTGCTCCAGAATACGCATATACAT 2696 Query 2701 CAAAGGTAGATGAGAAGATCGATGTGTACAGCTTCGGGGTAGTTTTGCTAGAGCTGGTGA 2760 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2697 CGAAGGTAGATGAGAAGATCGATGTGTACAGCTTCGGGGTAGTTTTGCTAGAGCTGGTGA 2756 Query 2761 CTGGAAGAGAAGGAAACAACGGAGATGAACACACAAACTTAGCAGATTGGTCATGGAAAC 2820 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2757 CTGGAAGAGAAGGAAACAACGGAGATGAACACACAAACTTAGCAGATTGGTCATGGAGAC 2816 Query 2821 ATTACCAATCTGGAAAACCGACCGCAGAGGCGTTTGATGAGGACATCAAAGAAGCTTCCA 2880 |||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 2817 ATTACCAATCCGGGAAACCAACCTCAGAGGCGTTTGATGAGGACATCAAAGAAGCTTCCA 2876 Query 2881 CGACTGAGGCGATGACAACAGTTTTCAAGCTAGGTCTCATGTGTACTAACACATTGCCTA 2940 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2877 CAACAGAGGCGATGACAACAGTTTTCAAGCTAGGTCTCATGTGTACTAACACATTGCCTA 2936 Query 2941 GTCATAGACCTTCCATGAAAGAGGTCTTGTATGTTCTGCGCCAACAAGGACTTGAGGCGA 3000 |||| |||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct 2937 GTCACAGACCTTCAATGAAAGAGATCTTGTATGTTCTGAGCCAACAAGGACTTGGGGCGA 2996 Query 3001 CGAAGAAGACTGCAACAGAGGCATATGAGGCACCTCTACTAGTTAGTTTATCGGGTCGAA 3060 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2997 CGAAGAAGACTGCAACAGAGGCACATGAGGCACCTCTACTAGTTAGTTTATCGGGTCGAA 3056 Query 3061 GGACAAGTAAAAGGGTAGAAGATGAAGATTTAGGTTTTGTATAATCAAATAATCACAACA 3120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3057 GGACAAGCAAAAGGGTAGAAGATGAAGATTTAGGTTTTGTATAATCAAATAATCACAATT 3116 Query 3121 CTTGATGTT-Gtttttttt--G-TG-A-AATGTACAAATGTATTAGAAACCATTTA-G-T 3172 |||| ||| |||||||| | | | ||||||||||||||||||||||| |||| | | Sbjct 3117 TTTGAGGTTTGTTTTTTTGAAGATCTAGAATGTACAAATGTATTAGAAACC-TTTATGGT 3175 Query 3173 TTTTGTGTAAGCAAAG 3188 |||||||||||||||| Sbjct 3176 TTTTGTGTAAGCAAAG 3191 > Ahg894518 jgi|Araly1|894518|Al_scaffold_0006_2514 Length=912 Score = 1173 bits (635), Expect = 0.0 Identities = 783/854 (92%), Gaps = 12/854 (1%) Strand=Plus/Plus Query 87 ATGACTCGTTTACCCTTACCTTTCCTTTTCTTCTTCCTC-ACGTCAATACCCTTATCTGT 145 ||||||| |||||||||||| ||||| |||||||||||| || |||||||||||||| || Sbjct 1 ATGACTCTTTTACCCTTACCCTTCCTCTTCTTCTTCCTCAAC-TCAATACCCTTATCCGT 59 Query 146 CTTTTCGCAGTTCAACGACCAGTCAACGCTTCTGAACCTGAAACGCGATCTCGGAGATCC 205 |||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 60 CTTTTCACAGTCCAACGACCAGTCAACGCTCCTGAACCTAAAACGCGATCTCGGAGATCC 119 Query 206 ACCGTCTCTCCGGCTGTGGAACAACACATCTTCACCGTGCAACTGGTCGGAGATCACTTG 265 ||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||| ||| Sbjct 120 ACCGTCTCTCCGGCTATGGAACGACACCTCTTCACCGTGCAATTGGTCGGAGATCATTTG 179 Query 266 CACCGCCGGAAATGTCACCGGGATCAATTTCAAGAACCAGAACTTCACTGGGACAGTTCC 325 ||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||| Sbjct 180 CACCGCCGGAAATATCACTGGGATCAATTTCAAGAACAAGAACTTCACCGGGACAGTTCC 239 Query 326 AACGACGATATGCGATTTGTCGAATCTCAATTTCCTTGACTTATCGTTTAATTACTTCGC 385 ||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| Sbjct 240 GACGACGATATGCGATTTGTCGAATCTCAATTTCCTCGATTTATCGTTTAATAACTTCGC 299 Query 386 CGGCGAGTTTCCGACGGTTCTTTACAATTGCACGAAGCTTCAATATCTCGATCTCTCTCA 445 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 300 CGGCGAGTTTACGACGGTTCTTTACAAGTGCACGAAGCTTCAATATCTCGATCTCTCTCT 359 Query 446 GAACCTTCTCAACGGCTCACTTCCCGTCGACATCGACCGTCTCTCACCGGAACTCGACTA 505 |||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 360 GAACGTTTTCAACGGCTCACTTCCCGTCGACATCGACCGTCTCTCACCGGAACTTGACTA 419 Query 506 TCTCGACTTAGCTGCTAACGGA-TTCTCCGGCGATATCCCTAA-AAGTCTCGGACGGATC 563 |||||||||||| ||||||| | ||| |||| ||||||||||| || | |||||| ||| Sbjct 420 TCTCGACTTAGCAGCTAACG-ACTTCGCCGGAGATATCCCTAAGAA-TATCGGACATATC 477 Query 564 TCGAAGCTCAAGGTATTGAATCTGTACCAGAGCGAATACGACGGTACGTTTCCATCGGAG 623 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 478 TCGAAACTCAAGGTATTGAATCTGTACCAGAGCGAATACGACGGAACGTTTCCGTCGGAG 537 Query 624 ATCGGAGACTTA-TCGGAGCTTGAAGAACTTCGACTAGCGTTAAACGATAAGTTTACTCC 682 ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct 538 ATCGGAGACTTGGTCG-AGCTTGAAGAACTTCGATTAGCGTTAAACGATAAGTTTACGCC 596 Query 683 GGCTAAGATTCCGATAGAGTTTGGGAAGTTGAAGAAACTCAAGTATATGTGGTTAGA-GG 741 ||| ||| | |||| |||||| |||| ||||||||||| ||||||||||||||| | || Sbjct 597 GGCGAAGCTCCCGACGGAGTTTCGGAAATTGAAGAAACTGAAGTATATGTGGTTA-ACGG 655 Query 742 AGATGAATTTGATCGGAGAAATCTCACCCGTTGTTTTCGAAAACATGACGGATCTTGAGC 801 |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| | | Sbjct 656 AGATGAATTTGATCGGAGAAATCTCAGCCGTTGTTTTCGAGAACATGACGGGTCTTAAAC 715 Query 802 ACGTTGACTTATCGGTCAATAACTTAACGGGTCGGATCCCAGATGTTTTATTCGGGTTGA 861 ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||| Sbjct 716 ACGTTGACTTATCGGGCAACAATTTAACGGGTCGGATCCCAGATGTTTTATTCGGGTTGA 775 Query 862 AGAATCTCACCGAGT-TTTATCTCTTCGCTAATGGCTTAACCGGAGAAATCCCCAAATCA 920 |||||||||| | | ||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 776 AGAATCTCACTAA-TCTTTATCTCTACGCTAATGACTTAACCGGAGAAATCCCCAAATCA 834 Query 921 ATTTCGGCGACGAA 934 |||||||||||||| Sbjct 835 ATTTCGGCGACGAA 848 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123382651666 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5