BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G26150.1
Length=2112
Score E
Sequences producing significant alignments: (Bits) Value
Ahg894540 jgi|Araly1|894540|Al_scaffold_0006_2536 3199 0.0
Ahg940686 jgi|Araly1|940686|scaffold_601230.1 1242 0.0
> Ahg894540 jgi|Araly1|894540|Al_scaffold_0006_2536
Length=2124
Score = 3199 bits (1732), Expect = 0.0
Identities = 1978/2096 (94%), Gaps = 19/2096 (1%)
Strand=Plus/Plus
Query 1 ATGGCTTCACCGTACTCGTCCGACGATATCCATTCTCCGGTGAACTCAACGGTCGTTGCA 60
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 1 ATGGCTTCACCGTACTCGTCAGACGATATCCATTCTCCGGTGAACTCGACGGTGGTTGCA 60
Query 61 ATAGACAAAGAGAAA-CATAGTTC-TTACGCTGTTCGTTGGGCCGTCGACCATCTCCTCA 118
||||||||||| ||| ||||| || |||||||||||||||||| ||||||||||||||||
Sbjct 61 ATAGACAAAGA-AAAGCATAG-TCATTACGCTGTTCGTTGGGCGGTCGACCATCTCCTCA 118
Query 119 ATATGATTCACAATCCCGTCATGATTCTTGTCCATGTTCGTACCAAAAATTCAAACCATG 178
||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 119 ATATGATTCACAAACCAGTCATGATTCTTGTCCATGTTCGTTCCAAAAACTCAAACCATG 178
Query 179 GAGCCAACTTGAACAATGATGATCTAAATCAGCTTTTTATTCCATATCGAGGATATTGTG 238
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 GAGCCAATTTGAATAATGATGATCTAAATCAGCTTTTTATTCCATATCGAGGATATTGTG 238
Query 239 CGCGAAAAGGGGTTGTTCTAGACGATTCCGACGTAGCAAAAACAATCTTGGATTACGTTA 298
||||||||||||||||||| |||||||| || || |||||| |||| ||||||||| |||
Sbjct 239 CGCGAAAAGGGGTTGTTCTTGACGATTCGGATGTGGCAAAAGCAATATTGGATTACATTA 298
Query 299 ATAACAACCTGGTTAACAATCTTGTATTGGGAGCATCCACGAAGAACACCTTCGCTAGGT 358
|||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||
Sbjct 299 ATAACAACCTGGTTAACAATCTTGTAATGGGAGCATCCTCGAAGAACAGCTTCGCTAGGT 358
Query 359 CTTTTATGTTTAGTAAACCACATGAGGTGCAATCTAGCATAATGAAATCGACGCCTGATT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 CTTTTATGTTTAGTAAACCACATGAGGTGCAATCTAGCATAATGAAATCGACGCCTGATT 418
Query 419 TTTGTTCGGTGTATGTCATTTCTAAAGGAGGGAAAGTTCAGTCTTCCCGACCAGCTCAAA 478
||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 419 TTTGTTCCGTGTATGTCATTTCTAAAGGAGGAAAAGTTCAATCTTCCCGACCAGCACAAA 478
Query 479 GACCTATCACCAATACGCTTGCCCCGCCTCGTGTTCCATCCTCTGGCTTTTTAATCCAAT 538
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 479 GACCTATCACCAATACGCTTGCCCCGCCTCGTGTTCCGTCATCTGGCTTTTTAATCCAAT 538
Query 539 CTTTATCCGATAGCGAGCAAGATCTCATACCTAGGGTCCAGCGTAGTGCAAGGAACAAAC 598
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 539 CTTTATCGGATAGCGAGCAAGATCTTATACCTAGGGTCCAGCGTAGTGCAAGGAACAAAC 598
Query 599 CTAATGAGACTACTTATCCGCATAATCGTGCCGCCTTCAACACGACGCAAAAAGGTTACA 658
||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 599 CTAATGAGACTACTTATCCGCATAATCGT---GCCTTCAACACAACGCAAAAAAGTTACA 655
Query 659 AAAGCCCTATAAATGGGTCGATGGATTTCAACAACGGCTTTAATCAAGCTGCCTTCCAAA 718
||| | |||||||||||||||||||||| |||||||||||||| |||| |||||||||||
Sbjct 656 AAAACACTATAAATGGGTCGATGGATTTAAACAACGGCTTTAACCAAGTTGCCTTCCAAA 715
Query 719 GAAATCCCACGTTACAAAGTTCGTTTTCTGATGAATCTGATGGTGGGTTTGG-AGTGATG 777
||||||| |||||||||||||| ||||||||||||||||| | ||| || || | |||||
Sbjct 716 GAAATCCAACGTTACAAAGTTCATTTTCTGATGAATCTGAAGTTGGATTAGGCA-TGATG 774
Query 778 GGTT-CAGTTGATCTCTCTTCTCAAAATAGTATGGATTTTTATCATGGTGCATCGAGTTC 836
|||| || ||||||||||| |||| |||| ||||||||||||||||||||||||||||||
Sbjct 775 GGTTCCA-TTGATCTCTCTGCTCATAATAATATGGATTTTTATCATGGTGCATCGAGTTC 833
Query 837 TTCAGAAGAGTCAATTCCACAATCAACTAAAGATATTGAAGCTGAGATGAGAAGGCTAAA 896
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 834 TTCAGAAGAGTCGATTCCACAATCAACTAAAGATATTGAAGCTGAAATGAGAAGGCTAAA 893
Query 897 GCTTGAACTTAAGCAAACTATGGACATGTATAGCTCAGCTTGTAAAGAAGCACTTACGGC 956
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 GCTTGAGCTTAAGCAAACTATGGACATGTATAGCTCAGCTTGTAAAGAAGCACTTACGGC 953
Query 957 AAAAAGAAAGGCAAACGAGCTAAATCAATGGAAGATAGAAGAAGCTCGTAAA-TTCGAGA 1015
||||||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||
Sbjct 954 AAAAAGAAAGGCAAACGAGCTAAATCAGTGGAAAATAGAAGAAGCTCG-AAAGTTCGAGA 1012
Query 1016 AAGCGAGGCTTTCTGAAGAAGCAGCATTGGCAGTTGCTGAAATCGAGAAAGCAAAGTGTA 1075
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct 1013 AAGCGAGGCTTTCTGAAGAAGCAGCATTGGCAGTTGCGGAAATGGAGAAGGCAAAGTGTA 1072
Query 1076 GAACAGCCGTAGAAGCAGCTGAGAAAGCTCAAAGAATGGCTGAACTAGAAGGACAAAGAA 1135
||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1073 GAACAGCAGAAGAAGCAGCTGAGAAAGCTCAGAGAATGGCTGAGCTAGAAGGACAAAGAA 1132
Query 1136 GGAAGCAAGCAGAGATGAAAGCTG-TAAGTGAAGAAAAGGACAAAGACCGCGCAGTGAGT 1194
|||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||
Sbjct 1133 GGAAGCAAGCGGAGATGAAAGC-GATAAGTGAAGAAAAGGATAAAGACCGCGCAGTGAGT 1191
Query 1195 GCTTTGGCACATAACGATGTTCGCTACAGAAAATATA-GTATAGAAGAGATCGAAGAAGC 1253
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1192 GCTTTGGCACATAACGATGTTCGCTACAGAAAATATACG-ATAGAAGAGATCGAAGAAGC 1250
Query 1254 TACAGAG-AGGTTTGCAAATCATAGGAAGATTGGTGAAGGAGGATATGGACCTGTGTACA 1312
||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1251 CACAGAACAG-TTTGCAAATCATAGGAAGATTGGTGAAGGAGGATATGGACCGGTGTATA 1309
Query 1313 ATGGTGAACTTGACCACACTCCTGTTGCCATTAAAGTTTTAAGACCTGATGCTGCTCAAG 1372
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 ATGGCGAACTTGACCACACTCCTGTTGCCATTAAAGTTTTAAGACCTGATGCTGCTCAAG 1369
Query 1373 GaaaaaaaCAATTTCAACAAGAAGTTGAGGTTCTATGTTCCATAAGGCATCCTCACATGG 1432
|||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||
Sbjct 1370 GAAAAAAACAATTTCAACAAGAAGTTGAGGTTTTAAGTTCCATAAGGCATCCTCATATGG 1429
Query 1433 TTCTTCTCCTTGGTGCATGTCCTGAATATGGATGTTTGGTTTACGAGTTCATGGAAAATG 1492
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1430 TTCTTCTCCTTGGTGCATGTCCAGAATATGGATGTTTGGTTTATGAGTTCATGGAAAATG 1489
Query 1493 GGAGCTTAGAGGATAGACTTTTTCGTACTGGAAACTCTCCACCGCTTTCGTGGAGGAAAC 1552
||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||
Sbjct 1490 GGAGCTTAGAGGATAGACTCTTCCGTAGAGGAAACTCTCCACCGCTTTCGTGGAGGAAAC 1549
Query 1553 GTTTTGAAATAGCGGCGGAGATTGCTACCGCACTCTCATTCCTTCATCAAGCTAAGCCAG 1612
||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1550 GTTTTGAAATAGCCGCGGAGATTGCTACTGCCCTCTCATTCCTTCATCAAGCTAAGCCAG 1609
Query 1613 AACCTTTAGTTCACCGCGACCTAAAACCAGCCAATATACTCTTAGACAAAAACTACGTGA 1672
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||
Sbjct 1610 AACCTTTAGTTCACCGCGACCTTAAACCAGCCAATATACTCTTAGACAGAAACTATGTGA 1669
Query 1673 GCAAGATCAGCGACGTTGGTTTAGCGCGGTTAGTCCCCGCATCGATAGCTGATAGCGTCA 1732
||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |
Sbjct 1670 GCAAGATCAGCGACGTTGGTTTAGCGCGGTTAGTCCCAGCATCGGTAGCTAATAGCGTTA 1729
Query 1733 CGCAATTCCACATGACATCTGCGGCAGGAACGTTTTGTTACATAGACCCTGAATACCAAC 1792
| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1730 CACAATACCACATGACATCCGCGGCAGGAACGTTTTGTTACATAGACCCTGAATACCAAC 1789
Query 1793 AAACAGGAATGTTAACCACAAAATCAGACGTATACTCATTGGGGATATTGCTACTTCAGA 1852
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1790 AAACAGGAATGTTAACCACAAAGTCAGACGTATACTCATTTGGGATATTGCTACTTCAGA 1849
Query 1853 TTATAACCGGAAGGCCTCCCATGGGGCTGGCTCACCAAGTTTCAAGGGCAATTAGTAAAG 1912
| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1850 TCATAACCGCAAGGCCTCCCATGGGGCTGGCTCACCAAGTCTCGAGGGCAATTAGTAAAG 1909
Query 1913 GAACTTTCAAGGAAATGCTTGACCCCGTTGTGCCTGATTGGCCTGTACAAGAGGCTCAAT 1972
|||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||
Sbjct 1910 GAACTTTCAAGGAAATGCTTGACCCCGTCGTGCATGATTGGCCTTTACAAGAGGCTCAAT 1969
Query 1973 CTTTTGCTACTCTAGCGTTGAAATGTGCGGAGCTAAGAAAAAGAGATAGACCAGATCTTG 2032
|||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1970 CTTTTGCTACTCTATCGTTGAAATGCGCGGAGCTAAGAAAAAGAGATAGACCCGATCTTG 2029
Query 2033 GGAAGGAAGTAGTCCCACATCTTATTAGATTAAAAAACTTTGGGAATGATGGTGAT 2088
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2030 GAAAGGAAGTAGTCCCACATCTTATTAGATTAAAAAACTTTGGGAATGATGTTGAT 2085
> Ahg940686 jgi|Araly1|940686|scaffold_601230.1
Length=2143
Score = 1242 bits (672), Expect = 0.0
Identities = 1648/2103 (78%), Gaps = 131/2103 (6%)
Strand=Plus/Plus
Query 40 GTGAACTCAACGGTCGTTGCAATAGACAAAGAGAA-ACATAGTTC-TTACGCTGTTCGTT 97
|||||||| ||||| || || || |||||||| || | | || || |||||||||||||
Sbjct 60 GTGAACTCGACGGTGGTCGCCATTGACAAAGACAAGA-ACAG-TCACTACGCTGTTCGTT 117
Query 98 GGGCCGTCGACCATCTCCTCAATATGATTC-ACAATCCCGTCATGATTCTTGTCCATGTT 156
|||||||||| |||||| |||||||| || | ||| || ||||||||||||||||||
Sbjct 118 GGGCCGTCGATCATCTCTTCAATATG-GTCAATAATGCCAAGATGATTCTTGTCCATGTT 176
Query 157 CGTAC-CAAAAATTCAAACCATGGAGCCAAC-TTGAACAATGATG-ATCTAAATCAGCTT 213
||| | |||||||| || ||||||| ||| ||| | || ||| || |||| ||||||
Sbjct 177 CGT-CTAAAAAATTCTAATCATGGAGGAAACATTG-ATGATAATGAAT-TAAACCAGCTT 233
Query 214 TTTATTCCATATC-GAGGATATTGTGCGC-G--A---A----AA-G---G-GGTTGTTCT 257
||| ||||||| | |||| |||||||| | | | | || | | |||| ||||
Sbjct 234 TTTGTTCCATA-CAGAGGTTATTGTGCACGGAAAGGGATTTCAATGATTGAGGTTATTCT 292
Query 258 AGACGATTCCGACGTAGCAAAAACAATCTTGGATTACGTTAATAACAACCTGGTTAACAA 317
||||||| ||||||| || ||| || | ||||||||||| || || ||||| || | |||
Sbjct 293 AGACGATACCGACGTTGCGAAAGCAGTTTTGGATTACGTGAACAATAACCTTGTGACCAA 352
Query 318 TCTTGTATTGGGAGCATCCACGAAGAACACC-TTCGCTAGGTCTTTTATGTTTAGTAAAC 376
||||| |||||| ||||| | ||| | || || || || ||| | | || | |||
Sbjct 353 CCTTGTGTTGGGATCATCCTCAAAG-AGTCCATTTGCAAGATCTCTCAAATTCACTAAGT 411
Query 377 CACATGA-GGTGCAATCTAGCATAATGAAATCGACGCCTGATTTTTGTTCGGTGTATGTC 435
||||||| | ||| |||| | | | ||||| |||||||| |||||||| | ||||||
Sbjct 412 CACATGACGTTGC-ATCTTCCGTTCTCAAATCAACGCCTGAGTTTTGTTCCATTTATGTC 470
Query 436 ATTTCTAAAGGAGGGAAAGTTCAGTCTTCCCGACCAGCTCAAAGACCTATCACCAATACG 495
|||||| || ||| |||||||| ||||| || |||||||||| |||||||||||||||
Sbjct 471 ATTTCT-AA--AGGCAAAGTTCACTCTTCAAGAACAGCTCAAAGGCCTATCACCAATACG 527
Query 496 CTTGCCCCGCCTCGTGTTCCATCCTCTGGCTTTTTAATCCAATCTTTATCCGATAGCGAG 555
|||| ||| ||||||| || || ||| | ||| || | | | | | || | ||
Sbjct 528 CTTGTCCCTCCTCGTGCACCTTCTTCT-AC-GTTTCAT-CTA-CCTGA-CC-CT---GAC 578
Query 556 CAAGATCTCA-T-ACCTA-GGGTCCAGCGTAGTGCAAGGAACAAACCT-AATGAGA-CTA 610
|| | | ||| | ||||| |||| ||||||| ||| || |||| | | | |||| ||
Sbjct 579 CATG-T-TCATTCACCTAGGGGT-CAGCGTAATGCGAGAAACACAGTTCCA-GAGAGGTA 634
Query 611 CTTATCCGCATAATCGTGCCGCCTTCAACACGACG-CAAAAAGGT-TACAAAAGCCCTAT 668
| ||| ||| || | | |||||| || | | | | || | |||||| |||||
Sbjct 635 --T-TCC-CATGATAATAAGGGCTTCAA-ACCA-GTGAGAGAGATGCACAAAATCCCTAC 688
Query 669 AAATGGGTCGA-TGGATTTCAACAACG-GCTTTAATCAAGC--TGCCTTCCAAA-GAAAT 723
|||||| || | |||| ||||| | | | |||| || || | | |||| ||| |
Sbjct 689 AAATGGATC-ATTGGACTTCAATTATGAG-TTTAGGCAGGCAAAG-GGT-CAAAGGAACT 744
Query 724 CCCA-CGTTACA-AAGTTCGTTTTCTGATGAAT-CTGATGGTGGGT-T-TGGA-G-TGAT 776
||| || | | |||||| |||||||||| || |||||| ||||| | | || | ||||
Sbjct 745 -CCACCG-GA-AGAAGTTCATTTTCTGATG-ATGCTGATGTTGGGTCTAT-GATGATGAT 799
Query 777 GGGTTC-AGTTGATCTCTCTTCTCAAAATAGTATGGATTTTTATCATGGTGCAT-CGAGT 834
|||||| | |||| || | || | ||| | | || | | | |||||||| || ||
Sbjct 800 GGGTTCTA-TTGACCTAAGTGCTGAGAAT--T-TTGA-TATGGT--TGGTGCATCCG-GT 851
Query 835 TCTTCAGAAGAGTCAATTCCACAATCAACTAAAGATATTGAAGCTGAGATGAGAAGGCTA 894
||||| || |||||| || | |||||||| | |||||||||||||| |||| |||||||
Sbjct 852 TCTTCTGATGAGTCAGTTTCGCAATCAACGAGGGATATTGAAGCTGAAATGAAAAGGCTA 911
Query 895 AAGCTTGAACTTAAGCAAACTATGGACATGTATAGCTCAGCTTGTAAAGAAGCACTTACG 954
||| ||||||| ||||| ||||||||||||||||||||||| || |||||||| ||||
Sbjct 912 AAGATTGAACTCAAGCAGACTATGGACATGTATAGCTCAGCCTGCAAAGAAGCTCTTAAT 971
Query 955 GC-AAAAAGAAAGGCAAACGAGCTAAATCAATGGAAGA-TAGAAGAAGCTCGTAA-ATTC 1011
|| ||||||||| ||||| ||||| ||||| ||||| | | ||||||||||| || |||
Sbjct 972 GCGAAAAAGAAA-GCAAATGAGCTTAATCAGTGGAA-ATTGGAAGAAGCTCG-AAGATTT 1028
Query 1012 GAGAAAGCGAGGCTTTCTGAAGAAGCAGCATTGGCAGTTGCTGAAATCGAGAAAGCAAAG 1071
||| |||| |||| | ||||||| ||||| || || ||||| ||||| ||||| || |||
Sbjct 1029 GAGGAAGCTAGGCATGCTGAAGAGGCAGCTTTAGCTGTTGCGGAAATGGAGAAGGCCAAG 1088
Query 1072 TGTAGAACAGCCG-TAGAAGCAGCTGAGAAAGCTCAAAGAATGGCTGAACTAGAAGGACA 1130
|| ||| | | || | ||||||||||||||||| || |||||||| || | ||||||||
Sbjct 1089 TGCAGAGCTG-CGCTGGAAGCAGCTGAGAAAGCGCAGAGAATGGCAGAGTTGGAAGGACA 1147
Query 1131 AAGAAGGAAGCAAGCAGAGATGAAAGCT-GTAAGTGAAGAAAAGGACAAAGACCGCGCAG 1189
||||||||||||||||||||||||||| | ||| ||| |||| |||||||| ||
Sbjct 1148 AAGAAGGAAGCAAGCAGAGATGAAAGCAAG-AAGAGAATCGCAGGAGAAAGACCGTGCTC 1206
Query 1190 TGAGTGCTTTGGCACATAACGATGTTCGCTACAGAAAATA-TAGTATAGAAGAGATCGAA 1248
| |||||||||| ||| |||||||| || ||||||| ||| | ||| || ||||| |||
Sbjct 1207 TTAGTGCTTTGGTACAGAACGATGTCCGTTACAGAAGATACTC-TATTGACGAGATTGAA 1265
Query 1249 GAAGCTACAGAGAGGTTTGCAAATCAT-AGGAAGATTGGTGAAGGAGGATATGGACCTGT 1307
| ||||| || ||||||||||| || || || || || ||||| ||||||||||| ||
Sbjct 1266 GTGGCTACTGAAAGGTTTGCAAA-CAACAGAAAAATAGGGGAAGGCGGATATGGACCAGT 1324
Query 1308 GTA-CAATGGTGA-ACTTGACCACACTCCTGTTGCCATTAAAGTTTTAAGACCTGATGCT 1365
||| || ||| | |||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct 1325 GTATCA-TGGC-ACACTTGATCACACTCCTGTTGCCATTAAAGTCTTGAGACCTGATGCT 1382
Query 1366 GCTCAAGGaaaaaaaCAATTTCAACAAGAAGTTGAGGTTCTATGTTCCATAAGGCATCCT 1425
||||||||||| |||||||||||||||||||| ||||||||| || |||||| ||||||
Sbjct 1383 GCTCAAGGAAAGAAACAATTTCAACAAGAAGTCGAGGTTCTAAGTAGCATAAGACATCCT 1442
Query 1426 CACATGGTTCTTCTCCTTGGTGCATGTCCTGAATATGGATGTTTGGTTTACGAGTTCATG 1485
|||||||||||||| |||||||| ||||| |||||||| |||||||| || |||||||||
Sbjct 1443 CACATGGTTCTTCTTCTTGGTGCGTGTCCAGAATATGGGTGTTTGGTGTATGAGTTCATG 1502
Query 1486 GAAAATGGGAGCTTAGAGGATAGACTTTTTCGTACTGGAAACTCTCCACCGCTTTCGTGG 1545
|| |||||||||||||||||| |||| ||||||| |||||||| || || || || |||
Sbjct 1503 GACAATGGGAGCTTAGAGGATCGACTCTTTCGTAGAGGAAACTCGCCTCCTCTCTCATGG 1562
Query 1546 AGGAAACGTTTTGAAATAGCGGCGGAGATTGCTACCGCACTCTCATTCCTTCATCAAGCT 1605
|||||| | ||| ||||||| || ||||| |||||||||||||| |||||||| |||||
Sbjct 1563 AGGAAAAGGTTTCAAATAGCTGCAGAGATCGCTACCGCACTCTCCTTCCTTCACCAAGCA 1622
Query 1606 AAGCCAGAACCTTTAGTTCACCGCGACCTAAAACCAGCCAATATACT-CTTAGACAAAAA 1664
|||||||| ||| | ||||| || ||||||||||| ||||||||||| || ||| |||||
Sbjct 1623 AAGCCAGAGCCTCTGGTTCATCGTGACCTAAAACCTGCCAATATACTTCT-AGATAAAAA 1681
Query 1665 CTACGTGAGCAAGATCAGCGACGTTGGTTTAGCGCGGTTAGTCCCCGCATC-GATAGCTG 1723
|||||||||||||||||| |||||||| ||||| |||||||| || || || | | |||
Sbjct 1682 CTACGTGAGCAAGATCAGTGACGTTGGATTAGCTCGGTTAGTACCTGCGTCAG-TGGCTA 1740
Query 1724 ATAGC-GTCACGCAATTCCACATGACATCTGCGGCAGGAACGTTTTGTTACATAGACCCT 1782
| | | || || |||| ||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1741 ACA-CAGTGACACAATACCACATGACATCTGCAGCAGGAACGTTCTGTTACATAGACCCC 1799
Query 1783 GAATACCAACAAACAGG-AATGTTAACCACAAAATCAGACGTATACTCATTGGGGATATT 1841
|| ||||| ||||| || || ||||||||| ||||||||| ||| |||||| |||||| |
Sbjct 1800 GAGTACCAGCAAACGGGCAA-GTTAACCACGAAATCAGACATATTCTCATTAGGGATAAT 1858
Query 1842 GCTACTTCAGATTATAACCGGAAGGCCTCCCATGGGGCTGGCTCACCAAGTTTCAAGGGC 1901
||| |||||||| || || | || | ||| ||||| ||||||| || || || |||||
Sbjct 1859 GCTGCTTCAGATCATCACTGCAAAGAGTCCAATGGGTTTGGCTCATCATGTGTCGAGGGC 1918
Query 1902 AATT-AGTAAAGGAACTTTCAAGGAAATGCTTGACCCCGTTGTGCCTGATTGGCCTGTAC 1960
||| | |||||||||||||||||| ||||||||||| || ||||| ||||||||||| |
Sbjct 1919 AATCGA-TAAAGGAACTTTCAAGGATATGCTTGACCCGGTCGTGCCAGATTGGCCTGT-C 1976
Query 1961 -AAGAGGCTC-AATCTTTTGCTAC-TCTAGCGT-TGAAATGTGCGGAGCTAAGAAA-AAG 2015
|||| ||| || |||||||| | | | || | |||||||| |||||||| || ||
Sbjct 1977 GAAGAAGCTTTAAA-TTTTGCTAAGT-T-GTGTCTAAAATGTGCAGAGCTAAGGAAGAA- 2032
Query 2016 AGATAGACCAGATCTTGGGAAGGAAGTAGTCCCACATCTTATTAGATTAAAAAACTTTGG 2075
|||| ||||||||||||| || ||| | || ||| | ||| | |||||| || ||| ||
Sbjct 2033 AGATCGACCAGATCTTGGAAAAGAAATTGTTCCAGAGCTTCTCCGATTAAGAAGCTTGGG 2092
Query 2076 GAA 2078
|||
Sbjct 2093 GAA 2095
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79456251070
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5