BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G26280.1
Length=1235
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489472 jgi|Araly1|489472|fgenesh2_kg.6__2606__AT5G26300.1 1574 0.0
Ahg930743 jgi|Araly1|930743|scaffold_303200.1 1055 0.0
Ahg930742 jgi|Araly1|930742|scaffold_303199.1 1055 0.0
Ahg930741 jgi|Araly1|930741|scaffold_303198.1 1055 0.0
Ahg942218 jgi|Araly1|942218|scaffold_602762.1 859 0.0
> Ahg489472 jgi|Araly1|489472|fgenesh2_kg.6__2606__AT5G26300.1
Length=1053
Score = 1574 bits (852), Expect = 0.0
Identities = 990/1057 (94%), Gaps = 8/1057 (1%)
Strand=Plus/Plus
Query 14 ATGAATAATCAAAAA-TGGAGTATAGGTTTCATATCTCTCGCTTTTCTCTTCATCACTTC 72
||| ||| ||||||| | |||| ||||||||||||||||||||||||| ||||| |||||
Sbjct 1 ATGGATAGTCAAAAACT-GAGTCTAGGTTTCATATCTCTCGCTTTTCTTTTCATTACTTC 59
Query 73 CTCTTCAGCTGAGTTCATCATTCAACAGGTCACAAAGGGCAGAGGAATAGAGTACAACAG 132
|||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||
Sbjct 60 CTCTTCAGCTGAGTTCATCATTCAACAGGTCACACAGGGAAGAGGAACAGAGTACAACAG 119
Query 133 TTCTTACAGTCTCGAGGAGAATCTTGGAGTGACAAGAGA-GTTGAGAGAAGAGCGACCAT 191
|||||||| |||| | ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 120 TTCTTACATTCTCAATGAGAATCTTGGAGTGACAAGA-ATGTTGAGAGAAGAGCGACCAT 178
Query 192 CGAGTAAGATAGTGACAATAACAAGCTTCTCAGTGATTAAAGGCAGAGGAGAACCCTATG 251
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 179 CGAGTAAGATAGTGACAATAACAAGCTTCTCAGTGATTAGAGGCAGAGGAGAACCCTATG 238
Query 252 AATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGAGATTGGTTTTGTACGTGAATGGTA 311
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 239 AATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGAGATTGGTATTGTACGTGAATGGTA 298
Query 312 ATAAAAACGACGGTGGAAATGATCATATTTCCCTTTACGCAAGGATCGAAGAGACA-AAC 370
|| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||
Sbjct 299 ATCCAAACGACGGTGGAAATGATCATATTTCACTTTATGCGAGGATCGAAGAGACAGAA- 357
Query 371 TCTCTTCCATTAGGTTGGGAAGTGAATGTTGATCTCAAACTCTTTGTCCATAATGGGAAG 430
||||||||| |||| ||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 358 TCTCTTCCAGTAGGCTGGGAAGTGAATGTTGATCTCAAACTCTTTGTCTACAATGGGAAG 417
Query 431 CTACACAAATATTTGACTGTTACAGATGGCTTAGTGAAGCGATATAACAATGCGAAAAAA 490
| | ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct 418 CAATACAAATATTTGACTGTTACAGATGGATTAGTGAAGCGATACAACAATGCTAAAAAA 477
Query 491 GAATGGGGTTTCGGACAATTGATTCCTCGATCAACATTCTACAACGCGAACGAAGGTTAC 550
|| ||||| | ||||||||||||||||| ||||||||| |||||| |||||||||| |||
Sbjct 478 GAGTGGGGATACGGACAATTGATTCCTCAATCAACATTTTACAACACGAACGAAGGGTAC 537
Query 551 CTTGACCAGGACACTGGTTCTTTTGGTGCTGAGATCTTTATTGTTAAACCGGCTCAACAA 610
|||| |||||||||||||||||||||||||||||||| || |||| ||||| || |||
Sbjct 538 ATTGAGCAGGACACTGGTTCTTTTGGTGCTGAGATCTTCATCGTTAGCCCGGCCCAGCAA 597
Query 611 CAAGAGAAAGTTACATTCATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTT 670
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 598 CAAGAGAAAGTCACATTCATATCAAACCCTCCTAACAATGTTTTCACTTGGAAGATACTT 657
Query 671 CGTTTCTCTACCTTGGAAGATAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGA 730
|||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 658 CGTTTCTCTAACTTGGAAGATAAATTCTATTACTCTGACGATTTTCTCGTTGAAGACCGA 717
Query 731 TACTGGAGACTAGGATTTAACCCGAAAGGG-GATGGAGGAGGAAGACCACATGCACTTCC 789
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 718 TACTGGAGACTAGGATTTAACCC-AAAGGGAGATGGAGGAGGAAGACCACATGCACTTCC 776
Query 790 AATCTTCCTATTTGCTCAAGGCCATAAGGCAAATGCAGTTGCTACAAACACTTGGGGAGC 849
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 777 AATCTTCCTATTTGCTCAAGGCCATAAGGCAAACGCAGTTGTTACAAACACTTGGGGAGC 836
Query 850 GGTTAATCTGCGGTTAAAGAATCAACGAAGTACTAACCATAGACAAATATATTCTGCAGC 909
|||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct 837 GGTTAATCTGCGGTTAAAGAATCAACGAAGCACCGACCACAGACAAATATATTCTGCAGC 896
Query 910 TTGGTACCCGATTGGAAGCGGTTATGGTGTGGGAGTGAACAATATCATACTGTTAGCTGA 969
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 897 TTGGTACCCGATTCGAAGCGGTTATGGTGTGGGAGTGAACAATATCATATTGTTAGCAGA 956
Query 970 TTTAAACGATGCATCAAAAGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAAT 1029
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 957 TTTAAACGATGCATCGAAAGGGTATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAAT 1016
Query 1030 GGTTAAGGTCTCTATAACCAACATCGTCTCCGCTTAA 1066
||||||||||||| |||||||||||||||||||||||
Sbjct 1017 GGTTAAGGTCTCTGTAACCAACATCGTCTCCGCTTAA 1053
> Ahg930743 jgi|Araly1|930743|scaffold_303200.1
Length=938
Score = 1055 bits (571), Expect = 0.0
Identities = 811/926 (88%), Gaps = 20/926 (2%)
Strand=Plus/Plus
Query 157 TGGAGTGACAAGAGA-GTTGAGAGAAGAGCGACCATCGAGTAAGATAGTGACAATAACAA 215
|||||||||| || | || |||||| ||||||||| | | |||||| |||| |||||||
Sbjct 8 TGGAGTGACAGGA-ATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAA 66
Query 216 GCTTCTCAGTGATTAAAGGCAGAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTG 275
| ||||| |||||| |||| |||||||||||||| ||||||||||| |||||||| | ||
Sbjct 67 GTTTCTCCGTGATTCAAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTG 126
Query 276 GTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATAAAAACGACGGTGGAAATGATC 335
|||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||
Sbjct 127 GTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATC 186
Query 336 ATATTTCCCTTTACGCAAGGATCGAAGAGACA-AACTCTCTTCCATTAGGTTGGGAAGTG 394
||||||| ||||||| ||||||||||||||| || ||||||||| ||| ||||||||
Sbjct 187 ATATTTCACTTTACGTGAGGATCGAAGAGACAGAA-TCTCTTCCAAGAGGCTGGGAAGTC 245
Query 395 AATGTTGATCTCAAACTCTTTGTCCATAATGGGAAGCTACACAAATATTTGACTGTTACA 454
|||||||| ||||||||||||||| | |||||||||| || ||| |||||||||||||||
Sbjct 246 AATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACA 305
Query 455 GATGGCTTAGTGAAGCGATATAACAATGCGAAAAAAGAATGGGGTTTCGGACAATTGATT 514
||||| ||||||| ||||| ||| ||||||||||||| ||||| | |||| ||||||||
Sbjct 306 GATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATT 365
Query 515 CCTCGAT-CAACATT-CTACAACGCGAACGAAGGTTACCTTGACCAGGACACTGGTTCTT 572
|||| | ||||||| || || ||||| ||||||||||||| |||||||||| |||||
Sbjct 366 CCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTT 423
Query 573 TTGGTGCTGAGATCTTT-ATTGTTAAACCGGCT-CAACAACAAGAGAAAGTTACATTCAT 630
||||||||||||| ||| || | || ||||| | || |||||||||||| || |||||
Sbjct 424 TTGGTGCTGAGAT-TTTCATCGGTACACCGG-TCCAGGTACAAGAGAAAGTCACGTTCAT 481
Query 631 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGA 690
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 482 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGA 541
Query 691 TAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAA 750
|||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 542 TAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAA 601
Query 751 CCCGAAAGGGGA-TGGAGGA-GGAAGACCACATGCACTTCCAATCTTCCTATTTGCTCAA 808
||| ||| || | |||| || |||||| |||| ||| | ||||||||||||| |||||||
Sbjct 602 CCC-AAAAGGTACTGGA-GATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
Query 809 GGCCATAAGGCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 868
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GGTCATAAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 719
Query 869 AATCAACGAAG-TACTAACCATAGACAAATATATTCTGCAGCTTGGTACCCGATTGGAAG 927
||||||||| | | | ||||| | ||||||||||||||||||||||||||| | | ||||
Sbjct 720 AATCAACGAGGCTCC-AACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAG 778
Query 928 CGGTTATGGTGTGGGAGTGAACAATATCATA-CTGTTAGCTGATTTAAACGATGCATCAA 986
|| ||||||||||||||| |||| ||||||| | |||||| || || || |||||||| |
Sbjct 779 CGATTATGGTGTGGGAGTTAACACTATCATATC-GTTAGCAGAATTCAATGATGCATCGA 837
Query 987 AAGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTATAA 1046
|||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 838 AAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGA 897
Query 1047 CCAACATCGTCTCCGCTTAAATATCT 1072
||||||||||||||| |||| |||||
Sbjct 898 CCAACATCGTCTCCGTTTAATTATCT 923
> Ahg930742 jgi|Araly1|930742|scaffold_303199.1
Length=938
Score = 1055 bits (571), Expect = 0.0
Identities = 811/926 (88%), Gaps = 20/926 (2%)
Strand=Plus/Plus
Query 157 TGGAGTGACAAGAGA-GTTGAGAGAAGAGCGACCATCGAGTAAGATAGTGACAATAACAA 215
|||||||||| || | || |||||| ||||||||| | | |||||| |||| |||||||
Sbjct 8 TGGAGTGACAGGA-ATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAA 66
Query 216 GCTTCTCAGTGATTAAAGGCAGAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTG 275
| ||||| |||||| |||| |||||||||||||| ||||||||||| |||||||| | ||
Sbjct 67 GTTTCTCCGTGATTCAAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTG 126
Query 276 GTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATAAAAACGACGGTGGAAATGATC 335
|||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||
Sbjct 127 GTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATC 186
Query 336 ATATTTCCCTTTACGCAAGGATCGAAGAGACA-AACTCTCTTCCATTAGGTTGGGAAGTG 394
||||||| ||||||| ||||||||||||||| || ||||||||| ||| ||||||||
Sbjct 187 ATATTTCACTTTACGTGAGGATCGAAGAGACAGAA-TCTCTTCCAAGAGGCTGGGAAGTC 245
Query 395 AATGTTGATCTCAAACTCTTTGTCCATAATGGGAAGCTACACAAATATTTGACTGTTACA 454
|||||||| ||||||||||||||| | |||||||||| || ||| |||||||||||||||
Sbjct 246 AATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACA 305
Query 455 GATGGCTTAGTGAAGCGATATAACAATGCGAAAAAAGAATGGGGTTTCGGACAATTGATT 514
||||| ||||||| ||||| ||| ||||||||||||| ||||| | |||| ||||||||
Sbjct 306 GATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATT 365
Query 515 CCTCGAT-CAACATT-CTACAACGCGAACGAAGGTTACCTTGACCAGGACACTGGTTCTT 572
|||| | ||||||| || || ||||| ||||||||||||| |||||||||| |||||
Sbjct 366 CCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTT 423
Query 573 TTGGTGCTGAGATCTTT-ATTGTTAAACCGGCT-CAACAACAAGAGAAAGTTACATTCAT 630
||||||||||||| ||| || | || ||||| | || |||||||||||| || |||||
Sbjct 424 TTGGTGCTGAGAT-TTTCATCGGTACACCGG-TCCAGGTACAAGAGAAAGTCACGTTCAT 481
Query 631 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGA 690
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 482 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGA 541
Query 691 TAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAA 750
|||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 542 TAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAA 601
Query 751 CCCGAAAGGGGA-TGGAGGA-GGAAGACCACATGCACTTCCAATCTTCCTATTTGCTCAA 808
||| ||| || | |||| || |||||| |||| ||| | ||||||||||||| |||||||
Sbjct 602 CCC-AAAAGGTACTGGA-GATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
Query 809 GGCCATAAGGCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 868
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GGTCATAAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 719
Query 869 AATCAACGAAG-TACTAACCATAGACAAATATATTCTGCAGCTTGGTACCCGATTGGAAG 927
||||||||| | | | ||||| | ||||||||||||||||||||||||||| | | ||||
Sbjct 720 AATCAACGAGGCTCC-AACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAG 778
Query 928 CGGTTATGGTGTGGGAGTGAACAATATCATA-CTGTTAGCTGATTTAAACGATGCATCAA 986
|| ||||||||||||||| |||| ||||||| | |||||| || || || |||||||| |
Sbjct 779 CGATTATGGTGTGGGAGTTAACACTATCATATC-GTTAGCAGAATTCAATGATGCATCGA 837
Query 987 AAGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTATAA 1046
|||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 838 AAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGA 897
Query 1047 CCAACATCGTCTCCGCTTAAATATCT 1072
||||||||||||||| |||| |||||
Sbjct 898 CCAACATCGTCTCCGTTTAATTATCT 923
> Ahg930741 jgi|Araly1|930741|scaffold_303198.1
Length=938
Score = 1055 bits (571), Expect = 0.0
Identities = 811/926 (88%), Gaps = 20/926 (2%)
Strand=Plus/Plus
Query 157 TGGAGTGACAAGAGA-GTTGAGAGAAGAGCGACCATCGAGTAAGATAGTGACAATAACAA 215
|||||||||| || | || |||||| ||||||||| | | |||||| |||| |||||||
Sbjct 8 TGGAGTGACAGGA-ATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAA 66
Query 216 GCTTCTCAGTGATTAAAGGCAGAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTG 275
| ||||| |||||| |||| |||||||||||||| ||||||||||| |||||||| | ||
Sbjct 67 GTTTCTCCGTGATTCAAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTG 126
Query 276 GTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATAAAAACGACGGTGGAAATGATC 335
|||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||
Sbjct 127 GTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATC 186
Query 336 ATATTTCCCTTTACGCAAGGATCGAAGAGACA-AACTCTCTTCCATTAGGTTGGGAAGTG 394
||||||| ||||||| ||||||||||||||| || ||||||||| ||| ||||||||
Sbjct 187 ATATTTCACTTTACGTGAGGATCGAAGAGACAGAA-TCTCTTCCAAGAGGCTGGGAAGTC 245
Query 395 AATGTTGATCTCAAACTCTTTGTCCATAATGGGAAGCTACACAAATATTTGACTGTTACA 454
|||||||| ||||||||||||||| | |||||||||| || ||| |||||||||||||||
Sbjct 246 AATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACA 305
Query 455 GATGGCTTAGTGAAGCGATATAACAATGCGAAAAAAGAATGGGGTTTCGGACAATTGATT 514
||||| ||||||| ||||| ||| ||||||||||||| ||||| | |||| ||||||||
Sbjct 306 GATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATT 365
Query 515 CCTCGAT-CAACATT-CTACAACGCGAACGAAGGTTACCTTGACCAGGACACTGGTTCTT 572
|||| | ||||||| || || ||||| ||||||||||||| |||||||||| |||||
Sbjct 366 CCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTT 423
Query 573 TTGGTGCTGAGATCTTT-ATTGTTAAACCGGCT-CAACAACAAGAGAAAGTTACATTCAT 630
||||||||||||| ||| || | || ||||| | || |||||||||||| || |||||
Sbjct 424 TTGGTGCTGAGAT-TTTCATCGGTACACCGG-TCCAGGTACAAGAGAAAGTCACGTTCAT 481
Query 631 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGA 690
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 482 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGA 541
Query 691 TAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAA 750
|||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 542 TAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAA 601
Query 751 CCCGAAAGGGGA-TGGAGGA-GGAAGACCACATGCACTTCCAATCTTCCTATTTGCTCAA 808
||| ||| || | |||| || |||||| |||| ||| | ||||||||||||| |||||||
Sbjct 602 CCC-AAAAGGTACTGGA-GATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
Query 809 GGCCATAAGGCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 868
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GGTCATAAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 719
Query 869 AATCAACGAAG-TACTAACCATAGACAAATATATTCTGCAGCTTGGTACCCGATTGGAAG 927
||||||||| | | | ||||| | ||||||||||||||||||||||||||| | | ||||
Sbjct 720 AATCAACGAGGCTCC-AACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAG 778
Query 928 CGGTTATGGTGTGGGAGTGAACAATATCATA-CTGTTAGCTGATTTAAACGATGCATCAA 986
|| ||||||||||||||| |||| ||||||| | |||||| || || || |||||||| |
Sbjct 779 CGATTATGGTGTGGGAGTTAACACTATCATATC-GTTAGCAGAATTCAATGATGCATCGA 837
Query 987 AAGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTATAA 1046
|||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 838 AAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGA 897
Query 1047 CCAACATCGTCTCCGCTTAAATATCT 1072
||||||||||||||| |||| |||||
Sbjct 898 CCAACATCGTCTCCGTTTAATTATCT 923
> Ahg942218 jgi|Araly1|942218|scaffold_602762.1
Length=1028
Score = 859 bits (465), Expect = 0.0
Identities = 828/996 (83%), Gaps = 53/996 (5%)
Strand=Plus/Plus
Query 103 CACA-AAGGGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTCGAGGA-GAATCTTGGA 160
|||| || |||||||||||||||||||||||||||||||||||| | || ||||||||||
Sbjct 62 CACAGAA-GGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTC-ACGACGAATCTTGGA 119
Query 161 GTGACAAGAGAGTTGAGAGAAGAGCGACCATC-GAGTAAGATAGTGACAATAACAAGCTT 219
||||||||| || ||| || |||| |||| | || |||||| || |||||||||||||
Sbjct 120 CTGACAAGAGTGTGGAGGGATGAGCCACCAGCGGA-TAAGATTCTGTCAATAACAAGCTT 178
Query 220 CTCAGTGATTAAAG-GCA-GAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTGGT 277
|||| | ||| | | ||| | | | |||||||| |||||||||||||||||||||||||
Sbjct 179 CTCAATAATT-AGGAGCATAATG-GCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGT 236
Query 278 TACAAATGGAGATTGGTTTTGTACGTGAATGGTAATAAAA-ACGACGGTGGAAATGATCA 336
|||||||||||||||||||||||| ||||||||| | || ||||||||||||| |||||
Sbjct 237 TACAAATGGAGATTGGTTTTGTACACGAATGGTAA-ACAAGACGACGGTGGAAAAGATCA 295
Query 337 TATTTCCCTTTACGCAAGGATCGAAGAGACA-AACTCTCTTCCATTAGGTTGGGAAGTGA 395
| |||| |||||||| ||||||| ||||||| || ||||||||| |||| ||||||||||
Sbjct 296 TGTTTCACTTTACGCGAGGATCGTAGAGACAGAA-TCTCTTCCAATAGGCTGGGAAGTGA 354
Query 396 ATGTTGATCTCAAACTCTTTGTCCATAATGGGAAGCTACACAAATATTTGACTGTTACAG 455
||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||
Sbjct 355 ATGTTGATCTCAAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAG 414
Query 456 ATGGCTTAGTGAAGCGATATAACAATGCGAAAAAAGAATGGGGTTTCGGACAATTGATTC 515
|||| |||||||||||||| |||||||| |||||||| | ||| ||||||||| | ||||
Sbjct 415 ATGGATTAGTGAAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAACTAATTC 474
Query 516 CTCGATCAACATT-CTACAACGCGAACGAAGG-TTACCTTGACCAGGACACTGGTTCTTT 573
||| |||||| || |||| ||| |||||| || || || ||| |||||||||||| ||||
Sbjct 475 CTCAATCAAC-TTACTACGACGGGAACGATGGATT-CCGTGAGCAGGACACTGGTACTTT 532
Query 574 TGGTGCTGAGATCTTTATTGTTAAACCGGCTC-AAC--AACAAGAGAAAGTTACATTCAT 630
|||||| ||||||| || ||||| |||| || ||| || |||||||||| ||||||||
Sbjct 533 TGGTGCCGAGATCTCCATCGTTAA-CCGG-TCCAACCTAA-AAGAGAAAGTCACATTCAT 589
Query 631 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGA 690
||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 590 ATCAAACCCTCCAGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGA 649
Query 691 TAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAA 750
|||| ||||| | || || || ||||| |||| |||||||||||||| | ||||||||||
Sbjct 650 TAAAATCTATAAATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAA 709
Query 751 CCCGAAAGGGGATGGAGGAGGAAGACCACATGCACTTCCAATCTTCCTATTTGCTCAAGG 810
||||||||| | || || ||| || | | | | || ||| ||||||||
Sbjct 710 CCCGAAAGG--A-GGTTTAGTC---CCA-AT-C--T---A-T-TTA-TAT--GCTCAAGG 751
Query 811 CCATAAGGCAAATGCAGTTGCTA-CAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGA 869
||||||||| ||||||| | ||| ||||| ||||| | |||||||||||||||||
Sbjct 752 ATTTAAGGCAAACGCAGTTGA-AGCAACCACTTATGGAGCAGCTAATCTGCGGTTAAAGA 810
Query 870 ATCAACGAAGTACTAACCATAGACAAAT-ATATT-CTGCAGCTTGGTACCCGATTGGAAG 927
||||||||| || ||||| | | | || || || ||| | |||||||| | || |||
Sbjct 811 ATCAACGAAACACCAACCACATA-ACATCAT-TTACTGAATATTGGTACCTGGTTCTAAG 868
Query 928 CGGTTATGGTGTGGGAGTGAACAATATCATACTGTTAGCTGATTTAAACGATGCATCAAA 987
||| || ||| |||||||||| | ||| | | ||||| ||| |||| |||||||| ||
Sbjct 869 CGGATACGGTTTGGGAGTGAATACTAT-AC-CA-TTAGCAGATGTAAAGGATGCATCGAA 925
Query 988 AGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTATAAC 1047
||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| | ||
Sbjct 926 AGGATATTTGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGGTCTCTGTGAC 985
Query 1048 CAACATCGTCTCCGCTTAAATATCTGC-ACTTCTTT 1082
||| ||||||||| ||||| |||| | ||||||||
Sbjct 986 GAACCTCGTCTCCGTTTAAAGATCT-CTACTTCTTT 1020
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46128729570
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5