BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G26290.1
Length=1002
Score E
Sequences producing significant alignments: (Bits) Value
Ahg942218 jgi|Araly1|942218|scaffold_602762.1 1140 0.0
Ahg489472 jgi|Araly1|489472|fgenesh2_kg.6__2606__AT5G26300.1 889 0.0
Ahg930743 jgi|Araly1|930743|scaffold_303200.1 689 0.0
Ahg930742 jgi|Araly1|930742|scaffold_303199.1 689 0.0
Ahg930741 jgi|Araly1|930741|scaffold_303198.1 689 0.0
> Ahg942218 jgi|Araly1|942218|scaffold_602762.1
Length=1028
Score = 1140 bits (617), Expect = 0.0
Identities = 841/944 (89%), Gaps = 36/944 (4%)
Strand=Plus/Plus
Query 85 CAGAGGAATAGAATACAACAGTTCTCACAGT-T--C-ACGAA---TGGAGTGACAAGAGT 137
|||||||||||| |||||||||||| ||||| | | ||||| |||| ||||||||||
Sbjct 71 CAGAGGAATAGAGTACAACAGTTCTTACAGTCTCACGACGAATCTTGGACTGACAAGAGT 130
Query 138 GTGGAGGGATGA-CCGACCATCGGATAAGATTCTTTCGATAACCAGCTTCTCAATAATTA 196
|||||||||||| || |||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct 131 GTGGAGGGATGAGCC-ACCAGCGGATAAGATTCTGTCAATAACAAGCTTCTCAATAATTA 189
Query 197 GGACG-AGACCT-GAACCCTATGAATCCTCTGTTTTTGAGGCTGTTGGTTACAAATGGAG 254
||| | | | | | |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 190 GGA-GCATA-ATGGCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGAG 247
Query 255 ATTGGTTTTGTACGTGAATGGTAATGAAAAGGACGGTGGAAAAGATCATGTTTCACTTTA 314
||||||||||||| ||||||||| || | |||||||||||||||||||||||||||||
Sbjct 248 ATTGGTTTTGTACACGAATGGTAAACAAGACGACGGTGGAAAAGATCATGTTTCACTTTA 307
Query 315 CGCGAAGATCGTAGAGACAGAATCTCTTCCAGTAGGATGGGAAGTGAATGTTGATCTCAA 374
||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 308 CGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGTGAATGTTGATCTCAA 367
Query 375 ACTCTTTGTCTACAATGGAAAGCTAAACAAATATTTGATTGTTACAG-T-G---A---AA 426
|||||||||||||||||| |||| |||||||||||||| |||||||| | | | ||
Sbjct 368 ACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAGATGGATTAGTGAA 427
Query 427 -CGATACAACAATGCGACAAAAGAGTTGGG-TTACGGACAACTTATTCCTCAATCAACAT 484
|||||||||||||| | |||||||||||| || ||||||||| |||||||||||||| |
Sbjct 428 GCGATACAACAATGCTAAAAAAGAGTTGGGATT-CGGACAACTAATTCCTCAATCAAC-T 485
Query 485 T-CTACGACGGGAACGATGGGTACCGTGAGCAGGACACTGGTACATTTGGTGCTGAGATC 543
| |||||||||||||||||| | ||||||||||||||||||||| |||||||| ||||||
Sbjct 486 TACTACGACGGGAACGATGGATTCCGTGAGCAGGACACTGGTACTTTTGGTGCCGAGATC 545
Query 544 TACATCGTTAAACCAGCCCAA-CAAAAAGAGAAAGTCACATTCATATCAAACCCTCCAGA 602
| ||||||| |||| | |||| | ||||||||||||||||||||||||||||||||||||
Sbjct 546 TCCATCGTT-AACCGGTCCAACCTAAAAGAGAAAGTCACATTCATATCAAACCCTCCAGA 604
Query 603 CAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAAGTCTATCAGTC 662
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 605 CAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAAATCTATAAATC 664
Query 663 TAACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTAAACCCGAAAGGAGGCTT 722
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 665 TGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAACCCGAAAGGAGGTTT 724
Query 723 AGTCCCAATCT-TCCTATATGCTCAAGGCTTTAAGGCAAACGCAGTTGTTA-CAACCACT 780
||||||||||| | ||||||||||||| ||||||||||||||||||| | ||||||||
Sbjct 725 AGTCCCAATCTATT-TATATGCTCAAGGATTTAAGGCAAACGCAGTTGA-AGCAACCACT 782
Query 781 TATGCAGC-GACTAATCTGCGGTTAAAGAATCAACGAAGCAGCAACCACGTAACAACATA 839
|||| ||| | ||||||||||||||||||||||||||| || ||||||| ||||| |||
Sbjct 783 TATGGAGCAG-CTAATCTGCGGTTAAAGAATCAACGAAACACCAACCACATAACATCATT 841
Query 840 TACTGCATATTGGTACCTGATTCCAAGCGGATTA-GGTTTGGGAGTGAACACTATACCGT 898
||||| ||||||||||||| ||| |||||||| | |||||||||||||| |||||||| |
Sbjct 842 TACTGAATATTGGTACCTGGTTCTAAGCGGAT-ACGGTTTGGGAGTGAATACTATACCAT 900
Query 899 TATCAGATGTAAAAGATGCATCGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAG 958
|| |||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct 901 TAGCAGATGTAAAGGATGCATCGAAAGGATATTTGGTGAATGATGCCATTATAATTGAAG 960
Query 959 TTGAAATGCTTACGGTCTCGGTGACGAACATTGTATCCGCTTAA 1002
|||||||||||||||||| ||||||||| | || |||| ||||
Sbjct 961 CTGAAATGCTTACGGTCTCTGTGACGAACCTCGTCTCCGTTTAA 1004
> Ahg489472 jgi|Araly1|489472|fgenesh2_kg.6__2606__AT5G26300.1
Length=1053
Score = 889 bits (481), Expect = 0.0
Identities = 881/1063 (83%), Gaps = 71/1063 (7%)
Strand=Plus/Plus
Query 1 ATGGACACTCAAAAA-TGGAGTATAGGTTTCATATCTCTCGCTTTTCTCTTCATCACTTC 59
||||| | ||||||| | |||| ||||||||||||||||||||||||| ||||| |||||
Sbjct 1 ATGGATAGTCAAAAACT-GAGTCTAGGTTTCATATCTCTCGCTTTTCTTTTCATTACTTC 59
Query 60 CTCTTCCGCTGAGCTCCTCATT----A----A-AC-----AGAGGAATAGAATACAACAG 105
|||||| |||||| || ||||| | | || ||||||| ||| ||||||||
Sbjct 60 CTCTTCAGCTGAGTTCATCATTCAACAGGTCACACAGGGAAGAGGAACAGAGTACAACAG 119
Query 106 TTCTCACAGT-TC-A--CGAA---TGGAGTGACAAGAGTGTGGAGGGATGACCGACCATC 158
|||| ||| | || | ||| ||||||||||||| ||| ||| || || ||||||||
Sbjct 120 TTCTTACATTCTCAATGAGAATCTTGGAGTGACAAGAATGTTGAGAGAAGAGCGACCATC 179
Query 159 GGA-TAAGATTCTTTCGATAACCAGCTTCTCAATAATTAGGACG-AGACCTGAACCCTAT 216
|| |||||| | | ||||| ||||||||| | |||| || | ||| |||||||||
Sbjct 180 -GAGTAAGATAGTGACAATAACAAGCTTCTCAGTGATTA-GAGGCAGAGGAGAACCCTAT 237
Query 217 GAATCCTCTGTTTTTGAGGCTGTTGGTTACAAATGGAGATTGGTTTTGTACGTGAATGGT 276
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 238 GAATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGAGATTGGTATTGTACGTGAATGGT 297
Query 277 AATGAAAAGGACGGTGGAAAAGATCATGTTTCACTTTACGCGAAGATCGTAGAGACAGAA 336
||| ||| ||||||||||| |||||| |||||||||| |||| ||||| ||||||||||
Sbjct 298 AATCCAAACGACGGTGGAAATGATCATATTTCACTTTATGCGAGGATCGAAGAGACAGAA 357
Query 337 TCTCTTCCAGTAGGATGGGAAGTGAATGTTGATCTCAAACTCTTTGTCTACAATGGAAAG 396
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 358 TCTCTTCCAGTAGGCTGGGAAGTGAATGTTGATCTCAAACTCTTTGTCTACAATGGGAAG 417
Query 397 CTAA-ACAAATATTTGATTGTTACAG-TG-A--A---A--CGATACAACAATGCGACAAA 446
| || |||||||||||| |||||||| || | | | |||||||||||||| | |||
Sbjct 418 C-AATACAAATATTTGACTGTTACAGATGGATTAGTGAAGCGATACAACAATGCTAAAAA 476
Query 447 AGAGTTGGGTTACGGACAACTT-ATTCCTCAATCAACATTCTACGACGGGAACGATGGGT 505
||||| ||| ||||||||| || ||||||||||||||||| ||| || |||||| ||||
Sbjct 477 AGAGTGGGGATACGGACAA-TTGATTCCTCAATCAACATTTTACAACACGAACGAAGGGT 535
Query 506 ACCGTGAGCAGGACACTGGTACATTTGGTGCTGAGATCTACATCGTTAAACCAGCCCAAC 565
|| |||||||||||||||| | |||||||||||||||| |||||||| || ||||| |
Sbjct 536 ACATTGAGCAGGACACTGGTTCTTTTGGTGCTGAGATCTTCATCGTTAGCCCGGCCCAGC 595
Query 566 AAAAAGAGAAAGTCACATTCATATCAAACCCTCC-AGACAATGTTTTCACTTGGAAGATA 624
|| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 596 AACAAGAGAAAGTCACATTCATATCAAACCCTCCTA-ACAATGTTTTCACTTGGAAGATA 654
Query 625 CTTCATTTCTCTACCTTGGAAGATAAAGTCTATCAGTCTAACGAGTTTCTTGTTGGAGAC 684
|||| |||||||| ||||||||||||| ||||| | ||| |||| ||||| |||| ||||
Sbjct 655 CTTCGTTTCTCTAACTTGGAAGATAAATTCTATTACTCTGACGATTTTCTCGTTGAAGAC 714
Query 685 CGATACTGGAAATTAGGATTAAACCC---G--A-A---AGGAGG----CTT-A-GT-C-- 726
|||||||||| | ||||||| ||||| | | | |||||| | | | |
Sbjct 715 CGATACTGGAGACTAGGATTTAACCCAAAGGGAGATGGAGGAGGAAGACCACATGCACTT 774
Query 727 CCAATCTTCCTATATGCTCAAGGCTTTAAGGCAAACGCAGTTGTTACAACCACTTATGCA 786
||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| | |
Sbjct 775 CCAATCTTCCTATTTGCTCAAGGCCATAAGGCAAACGCAGTTGTTACAAACACTTGGGGA 834
Query 787 GCGACTAATCTGCGGTTAAAGAATCAACGAAGCAGCAACCAC-GTAACAACATATA--CT 843
||| ||||||||||||||||||||||||||||| | ||||| | | ||| ||||| ||
Sbjct 835 GCGGTTAATCTGCGGTTAAAGAATCAACGAAGCACCGACCACAG-A-CAA-ATATATTCT 891
Query 844 GCATATTGGTACCTGATTCCAAGCGGATTA-GGTTTGGGAGTGAACACTAT-ACC--GTT 899
||| |||||||| ||||| |||||| ||| ||| |||||||||||| ||| | |||
Sbjct 892 GCAGCTTGGTACCCGATTCGAAGCGG-TTATGGTGTGGGAGTGAACAATATCATATTGTT 950
Query 900 ATCAGATGTAAAAGATGCATCGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAGT 959
| ||||| |||| |||||||||||||| ||| ||||||||||| |||||||| ||||||
Sbjct 951 AGCAGATTTAAACGATGCATCGAAAGGGTATTTGGTGAATGATGCCATTATCTTTGAAGC 1010
Query 960 TGAAATGCTTACGGTCTCGGTGACGAACATTGTATCCGCTTAA 1002
||||||| ||| |||||| || || ||||| || |||||||||
Sbjct 1011 TGAAATGGTTAAGGTCTCTGTAACCAACATCGTCTCCGCTTAA 1053
> Ahg930743 jgi|Araly1|930743|scaffold_303200.1
Length=938
Score = 689 bits (373), Expect = 0.0
Identities = 749/923 (81%), Gaps = 56/923 (6%)
Strand=Plus/Plus
Query 123 TGGAGTGACAAGAGTGTGGAGGGATGACCGACCATCGGATAAGATTCTTTCGATAACCAG 182
|||||||||| || ||||||| ||||| |||||| | | ||||| || | ||||| ||
Sbjct 8 TGGAGTGACAGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAG 67
Query 183 CTTCTCAATAATT--AGGACGAGACCTGAACCCTATGAATCCTCTGTTTTTGAGGCTGTT 240
||||| | ||| ||| |||| |||||||| ||||||||||| |||||||| | |
Sbjct 68 TTTCTCCGTGATTCAAGG--GAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGT 125
Query 241 GGTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATGAAAAGGACGGTGGAAA-AGA 299
||||||||||||||||| ||||||||||||||||||||| |||| || |||||||| | |
Sbjct 126 GGTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATA-A 184
Query 300 TCATGTTTCACTTTACGCGAAGATCGTAGAGACAGAATCTCTTCC-AGTAGGATGGGAAG 358
|||| |||||||||||| || ||||| |||||||||||||||||| || ||| |||||||
Sbjct 185 TCATATTTCACTTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAG-AGGCTGGGAAG 243
Query 359 TGAATGTTGATCTCAAACTCTTTGTCTACAATGGAAAGCTAA-ACAAATATTTGATTGTT 417
| |||||||| ||||||||||||||||||||||| |||| || ||| ||||||| ||||
Sbjct 244 TCAATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGC-AACGCAAGTATTTGACTGTT 302
Query 418 AC---------AGTGAAACGATACAACAATGCGACAAAAGAGTTGGGTTACGGACAACTT 468
|| |||||||||||||||| |||||| |||||||| ||| |||||| || ||
Sbjct 303 ACAGATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGA-AAATT 361
Query 469 -ATTCCTCAAT-CAACATT-CTACGACGGGAACGATGGGTACCGTGAGCAGGACACTGGT 525
||||||| | ||||||| || ||| |||| | || |||| |||||||||||||| |
Sbjct 362 GATTCCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCT 419
Query 526 ACATTTGGTGCTGAGATCTACATCGTTAAACCAGCCCAACAAAAAGAGAAAGTCACATTC 585
| |||||||||||||| | ||||| || ||| | ||| | ||||||||||||| |||
Sbjct 420 TCTTTTGGTGCTGAGATTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTC 479
Query 586 ATATCAAACCCTCCAGACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 645
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 539
Query 646 GATAAAGTCTATCAGTCTAACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTA 705
|||||| ||||| | ||| | || |||||||||| |||||||||||||| ||||||||
Sbjct 540 GATAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTT 599
Query 706 AACCCGAAAGG-A--GGC--T------T-A---G---TCCCAATCTTCCTATATGCTCAA 747
||||| ||||| | || | | | | |||||||||||||||||||||||
Sbjct 600 AACCCAAAAGGTACTGGAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
Query 748 GG-CTTTAAGGCAAACGCAGTTGTTACAACCACTTATGCAGCGACTAATCTGCGGTTAAA 806
|| | | ||| |||| ||||||| ||||| ||||| | |||| |||||||||||||||
Sbjct 660 GGTCAT-AAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAA 718
Query 807 GAATCAACGAAGCAGCAACCACGTAACAACATATA--CTGCATATTGGTACCTGATTCCA 864
|||||||||| || ||||||| ||||| ||||| ||||| |||||||| | || |
Sbjct 719 GAATCAACGAGGCTCCAACCACA-AACAA-ATATATTCTGCAGCTTGGTACCCCACTCGA 776
Query 865 AGCGGATTA-GGTTTGGGAGTGAACACTAT-AC--CGTTATCAGA-TGTAAAAGATGCAT 919
|||| |||| ||| ||||||| |||||||| | ||||| |||| | | || |||||||
Sbjct 777 AGCG-ATTATGGTGTGGGAGTTAACACTATCATATCGTTAGCAGAAT-TCAATGATGCAT 834
Query 920 CGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAGTTGAAATGCTTACGGTCTCGG 979
||||||| ||| ||||||||||| |||||||| |||||| ||||||| | | |||||| |
Sbjct 835 CGAAAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTG 894
Query 980 TGACGAACATTGTATCCGCTTAA 1002
|||| ||||| || |||| ||||
Sbjct 895 TGACCAACATCGTCTCCGTTTAA 917
> Ahg930742 jgi|Araly1|930742|scaffold_303199.1
Length=938
Score = 689 bits (373), Expect = 0.0
Identities = 749/923 (81%), Gaps = 56/923 (6%)
Strand=Plus/Plus
Query 123 TGGAGTGACAAGAGTGTGGAGGGATGACCGACCATCGGATAAGATTCTTTCGATAACCAG 182
|||||||||| || ||||||| ||||| |||||| | | ||||| || | ||||| ||
Sbjct 8 TGGAGTGACAGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAG 67
Query 183 CTTCTCAATAATT--AGGACGAGACCTGAACCCTATGAATCCTCTGTTTTTGAGGCTGTT 240
||||| | ||| ||| |||| |||||||| ||||||||||| |||||||| | |
Sbjct 68 TTTCTCCGTGATTCAAGG--GAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGT 125
Query 241 GGTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATGAAAAGGACGGTGGAAA-AGA 299
||||||||||||||||| ||||||||||||||||||||| |||| || |||||||| | |
Sbjct 126 GGTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATA-A 184
Query 300 TCATGTTTCACTTTACGCGAAGATCGTAGAGACAGAATCTCTTCC-AGTAGGATGGGAAG 358
|||| |||||||||||| || ||||| |||||||||||||||||| || ||| |||||||
Sbjct 185 TCATATTTCACTTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAG-AGGCTGGGAAG 243
Query 359 TGAATGTTGATCTCAAACTCTTTGTCTACAATGGAAAGCTAA-ACAAATATTTGATTGTT 417
| |||||||| ||||||||||||||||||||||| |||| || ||| ||||||| ||||
Sbjct 244 TCAATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGC-AACGCAAGTATTTGACTGTT 302
Query 418 AC---------AGTGAAACGATACAACAATGCGACAAAAGAGTTGGGTTACGGACAACTT 468
|| |||||||||||||||| |||||| |||||||| ||| |||||| || ||
Sbjct 303 ACAGATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGA-AAATT 361
Query 469 -ATTCCTCAAT-CAACATT-CTACGACGGGAACGATGGGTACCGTGAGCAGGACACTGGT 525
||||||| | ||||||| || ||| |||| | || |||| |||||||||||||| |
Sbjct 362 GATTCCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCT 419
Query 526 ACATTTGGTGCTGAGATCTACATCGTTAAACCAGCCCAACAAAAAGAGAAAGTCACATTC 585
| |||||||||||||| | ||||| || ||| | ||| | ||||||||||||| |||
Sbjct 420 TCTTTTGGTGCTGAGATTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTC 479
Query 586 ATATCAAACCCTCCAGACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 645
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 539
Query 646 GATAAAGTCTATCAGTCTAACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTA 705
|||||| ||||| | ||| | || |||||||||| |||||||||||||| ||||||||
Sbjct 540 GATAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTT 599
Query 706 AACCCGAAAGG-A--GGC--T------T-A---G---TCCCAATCTTCCTATATGCTCAA 747
||||| ||||| | || | | | | |||||||||||||||||||||||
Sbjct 600 AACCCAAAAGGTACTGGAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
Query 748 GG-CTTTAAGGCAAACGCAGTTGTTACAACCACTTATGCAGCGACTAATCTGCGGTTAAA 806
|| | | ||| |||| ||||||| ||||| ||||| | |||| |||||||||||||||
Sbjct 660 GGTCAT-AAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAA 718
Query 807 GAATCAACGAAGCAGCAACCACGTAACAACATATA--CTGCATATTGGTACCTGATTCCA 864
|||||||||| || ||||||| ||||| ||||| ||||| |||||||| | || |
Sbjct 719 GAATCAACGAGGCTCCAACCACA-AACAA-ATATATTCTGCAGCTTGGTACCCCACTCGA 776
Query 865 AGCGGATTA-GGTTTGGGAGTGAACACTAT-AC--CGTTATCAGA-TGTAAAAGATGCAT 919
|||| |||| ||| ||||||| |||||||| | ||||| |||| | | || |||||||
Sbjct 777 AGCG-ATTATGGTGTGGGAGTTAACACTATCATATCGTTAGCAGAAT-TCAATGATGCAT 834
Query 920 CGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAGTTGAAATGCTTACGGTCTCGG 979
||||||| ||| ||||||||||| |||||||| |||||| ||||||| | | |||||| |
Sbjct 835 CGAAAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTG 894
Query 980 TGACGAACATTGTATCCGCTTAA 1002
|||| ||||| || |||| ||||
Sbjct 895 TGACCAACATCGTCTCCGTTTAA 917
> Ahg930741 jgi|Araly1|930741|scaffold_303198.1
Length=938
Score = 689 bits (373), Expect = 0.0
Identities = 749/923 (81%), Gaps = 56/923 (6%)
Strand=Plus/Plus
Query 123 TGGAGTGACAAGAGTGTGGAGGGATGACCGACCATCGGATAAGATTCTTTCGATAACCAG 182
|||||||||| || ||||||| ||||| |||||| | | ||||| || | ||||| ||
Sbjct 8 TGGAGTGACAGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAG 67
Query 183 CTTCTCAATAATT--AGGACGAGACCTGAACCCTATGAATCCTCTGTTTTTGAGGCTGTT 240
||||| | ||| ||| |||| |||||||| ||||||||||| |||||||| | |
Sbjct 68 TTTCTCCGTGATTCAAGG--GAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGT 125
Query 241 GGTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATGAAAAGGACGGTGGAAA-AGA 299
||||||||||||||||| ||||||||||||||||||||| |||| || |||||||| | |
Sbjct 126 GGTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATA-A 184
Query 300 TCATGTTTCACTTTACGCGAAGATCGTAGAGACAGAATCTCTTCC-AGTAGGATGGGAAG 358
|||| |||||||||||| || ||||| |||||||||||||||||| || ||| |||||||
Sbjct 185 TCATATTTCACTTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAG-AGGCTGGGAAG 243
Query 359 TGAATGTTGATCTCAAACTCTTTGTCTACAATGGAAAGCTAA-ACAAATATTTGATTGTT 417
| |||||||| ||||||||||||||||||||||| |||| || ||| ||||||| ||||
Sbjct 244 TCAATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGC-AACGCAAGTATTTGACTGTT 302
Query 418 AC---------AGTGAAACGATACAACAATGCGACAAAAGAGTTGGGTTACGGACAACTT 468
|| |||||||||||||||| |||||| |||||||| ||| |||||| || ||
Sbjct 303 ACAGATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGA-AAATT 361
Query 469 -ATTCCTCAAT-CAACATT-CTACGACGGGAACGATGGGTACCGTGAGCAGGACACTGGT 525
||||||| | ||||||| || ||| |||| | || |||| |||||||||||||| |
Sbjct 362 GATTCCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCT 419
Query 526 ACATTTGGTGCTGAGATCTACATCGTTAAACCAGCCCAACAAAAAGAGAAAGTCACATTC 585
| |||||||||||||| | ||||| || ||| | ||| | ||||||||||||| |||
Sbjct 420 TCTTTTGGTGCTGAGATTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTC 479
Query 586 ATATCAAACCCTCCAGACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 645
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 539
Query 646 GATAAAGTCTATCAGTCTAACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTA 705
|||||| ||||| | ||| | || |||||||||| |||||||||||||| ||||||||
Sbjct 540 GATAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTT 599
Query 706 AACCCGAAAGG-A--GGC--T------T-A---G---TCCCAATCTTCCTATATGCTCAA 747
||||| ||||| | || | | | | |||||||||||||||||||||||
Sbjct 600 AACCCAAAAGGTACTGGAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
Query 748 GG-CTTTAAGGCAAACGCAGTTGTTACAACCACTTATGCAGCGACTAATCTGCGGTTAAA 806
|| | | ||| |||| ||||||| ||||| ||||| | |||| |||||||||||||||
Sbjct 660 GGTCAT-AAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAA 718
Query 807 GAATCAACGAAGCAGCAACCACGTAACAACATATA--CTGCATATTGGTACCTGATTCCA 864
|||||||||| || ||||||| ||||| ||||| ||||| |||||||| | || |
Sbjct 719 GAATCAACGAGGCTCCAACCACA-AACAA-ATATATTCTGCAGCTTGGTACCCCACTCGA 776
Query 865 AGCGGATTA-GGTTTGGGAGTGAACACTAT-AC--CGTTATCAGA-TGTAAAAGATGCAT 919
|||| |||| ||| ||||||| |||||||| | ||||| |||| | | || |||||||
Sbjct 777 AGCG-ATTATGGTGTGGGAGTTAACACTATCATATCGTTAGCAGAAT-TCAATGATGCAT 834
Query 920 CGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAGTTGAAATGCTTACGGTCTCGG 979
||||||| ||| ||||||||||| |||||||| |||||| ||||||| | | |||||| |
Sbjct 835 CGAAAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTG 894
Query 980 TGACGAACATTGTATCCGCTTAA 1002
|||| ||||| || |||| ||||
Sbjct 895 TGACCAACATCGTCTCCGTTTAA 917
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 37246089909
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5