BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G26751.1
Length=1666
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489503 jgi|Araly1|489503|fgenesh2_kg.6__2637__AT5G26751.1 2115 0.0
Ahg477878 jgi|Araly1|477878|fgenesh2_kg.3__579__AT3G05840.1 1349 0.0
Ahg933625 jgi|Araly1|933625|scaffold_401613.1 453 2e-126
Ahg470656 jgi|Araly1|470656|fgenesh2_kg.1__610__AT1G06390.1 375 4e-103
> Ahg489503 jgi|Araly1|489503|fgenesh2_kg.6__2637__AT5G26751.1
Length=1523
Score = 2115 bits (1145), Expect = 0.0
Identities = 1430/1559 (92%), Gaps = 53/1559 (3%)
Strand=Plus/Plus
Query 120 AAACCCACAAATCCTTACTCGTACGGATCTCTCTCTCTTTAATATCCTAATTCTTCTCTT 179
||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||
Sbjct 1 AAACCCACAAATCCTTAATCGTACGGA--TCTCTCTC-TTCGTATCCTAATTC--ATCTT 55
Query 180 CATCGATCTGAGATTTTTACGTTTTCAT-CGGCTTGAAAGTTTG-AA-GAGTTTTGTAGC 236
| ||||||||||| ||||| |||||| | | | | |||| | || | |||||||||
Sbjct 56 CCTCGATCTGAGA-TTTTAGGTTTTCTTCCAG-AT-AAAGAAAGAAACTATTTTTGTAGC 112
Query 237 CTGAAAAATGGCGTCAGTGGGTATAGCTCCTAATCCTGGAGCAAGAG----------AC- 285
||||||||||| |||||||||||||||||||||||||| ||||||| ||
Sbjct 113 TTGAAAAATGGCATCAGTGGGTATAGCTCCTAATCCTGGGGCAAGAGACTCTACTACACA 172
Query 286 T-CTACTGGTGTTGATAAATTGCCTGAAGAAATGAATGACATGAAAATTCGTGACGATAA 344
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 173 TACTACTGGTGTTGATAAATTACCTGAAGAAATGAATGACATGAAAATTCGTGACGATAA 232
Query 345 AGAAATGGAAGCGACAGTGGTAGATGGAAATGGAACAGAGACTGGACATATCATTGTGAC 404
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 233 AGAAATGGAAGCGACAGTGGTAGATGGAAATGGAACAGAGACTGGACATATCATAGTGAC 292
Query 405 TACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTACATGGCTGAGCGTGT 464
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 293 TACTATTGGTGGAAGAAATGGCCAACCAAAACAGACAATTAGCTACATGGCTGAACGTGT 352
Query 465 TGTTGGTCACGGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTCTTGAGACAGGAGAAAC 524
|||||| || |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 353 TGTTGGACATGGATCTTTTGGTGTTGTGTTCCAAGCGAGATGTCTTGAGACGGGAGAAAC 412
Query 525 TGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAACCGTGAGCTTCAAACCAT 584
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 413 TGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAATCGTGAGCTTCAAACCAT 472
Query 585 GAGGCTACTTGACCATCCTAATGTTGTGTCTCTGAAACATTGTTTCTTCTCAACCACTGA 644
||||||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||
Sbjct 473 GAGGCTACTTGACCATCCTAATGTTGTGTCTTTGAAACACTGCTTCTTTTCAACCACTGA 532
Query 645 AAAAGATGAGCTTTACCTCAATCTTGTTCTTGAGTACGTTCCAGAAACTGTTCATCGTGT 704
||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct 533 AAAAGATGAGCTTTACCTCAATCTTGTTCTTGAATACGTCCCAGAAACTGTGCATCGTGT 592
Query 705 TATCAAACACTACAACAAACTGAATCAGAGAATGCCTCTTATATACGTCAAACTTTACAC 764
|||||||||||| ||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct 593 TATCAAACACTATAACAAACTGAACCAGAGAATGCCTCTCATATACGTCAAGCTATACAC 652
Query 765 TTATCAGATTTTTAGAGCCTTATCTTACATTCACCGATGCATTGGTGTGTGTCATCGTGA 824
||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 653 TTATCAGATTTTTAGGGCCTTATCTTACATTCACCGATGTATTGGTGTGTGTCACCGTGA 712
Query 825 CATAAAACCTCAAAACTTGTTGGTAAATCCGCACACTCATCAAGTAAAGCTATGTGATTT 884
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 713 CATAAAGCCTCAAAACTTGTTGGTAAATCCGCACACTCATCAAGTAAAACTATGTGATTT 772
Query 885 TGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAACATTTCCTACATCTGCTCGAGGTA 944
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 773 TGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAACATCTCCTACATCTGCTCGAGGTA 832
Query 945 TTACAGAGCACCTGAACTTATTTTTGGAGCAACCGAGTATACGACAGCCATTGATGTCTG 1004
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 833 TTACAGAGCACCTGAACTTATTTTTGGAGCAACTGAGTATACAACAGCCATTGATGTCTG 892
Query 1005 GTCTGCAGGATGTGTTCTAGCTGAACTATTGCTTGGACAGCCCTTGTTCCCTGGTGAGAG 1064
|||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 893 GTCTGCGGGATGTGTTCTAGCTGAACTATTACTTGGACAGCCTTTGTTCCCTGGTGAGAG 952
Query 1065 CGGTGTTGATCAACTTGTAGAGATTATCAAGGTCTTGGGAACGCCTACTAGAGAAGAAAT 1124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 953 CGGTGTTGATCAACTTGTAGAGATTATCAAGGTCTTGGGAACGCCTACTAGGGAAGAAAT 1012
Query 1125 CAAGTGCATGAACCCAAACTACACGGAATTCAAATTCCCTCAGATTAAAGCTCATCCATG 1184
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1013 CAAGTGTATGAACCCTAACTACACAGAATTCAAATTCCCTCAGATTAAAGCTCATCCATG 1072
Query 1185 GCACAAGATTTTCCACAAACGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGACTTCT 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 GCACAAGATTTTCCACAAACGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGACTTCT 1132
Query 1245 TCAATACTCTCCTAATCTACGAAGTGCCGCTCTCGACACATTAGTCCACCCATTCTTTGA 1304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1133 TCAATACTCTCCTAATCTACGAAGTGCCGCTCTCGACACATTGGTCCACCCATTCTTTGA 1192
Query 1305 TGAGTTAAGAGACCCAAACGCACGTCTACCTAATGGACGTTTCCTTCCACCGCTTTTCAA 1364
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1193 TGAGCTAAGAGACCCAAACGCACGTCTACCTAATGGACGTTTCCTTCCACCACTTTTCAA 1252
Query 1365 CTTCAAGCCTCACGAGCTGAAAGGTGTACCATTGGAGATGGTAGCTAAGTTAGTACCTGA 1424
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1253 CTTCAAGCCTCACGAGCTGAAAGGTGTACCATTGGAGATGGTATCTAAGTTAGTACCTGA 1312
Query 1425 GCATGCAAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTTCCTCTTAATGTAGCATGAAC 1484
||||||||||||||||||||||||||||||||||||||||||| | || | | | ||
Sbjct 1313 GCATGCAAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTTCCT-TAAA---ACCCT-AA- 1366
Query 1485 ACAACAAACACTTCTTATAAATTACCTCTCTATGTATCAATATGTCACAAACTGATATGC 1544
| | | || | | | | || |||||||||||||||||| ||| ||||||||
Sbjct 1367 A-ATGTAGCA-TGA--ACACA--ACA-CTCTATGTATCAATATGTTACAGTCTGATATGT 1419
Query 1545 ACCCTTTGTTTGTTGTATGAGTAGAGaaaaaaaGAGTTATTACTATGGTTGGTTGGTTCA 1604
| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1420 ATCCTTTGTTTGTTGTATGAGTAGAGAAAAAAAGAGTTATTACTAT-------------A 1466
Query 1605 TAATGTAAAAGCCCACCAAGATTTTTTATCTA-GATAAA-GAGTTTGCTACTTCTGCTT 1661
| |||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||
Sbjct 1467 -A-TGTAAAAGCCCACCAAGAATTTTTATCTAAGATAAAAGAGTTTGCTTCTTCTGCTT 1523
> Ahg477878 jgi|Araly1|477878|fgenesh2_kg.3__579__AT3G05840.1
Length=1693
Score = 1349 bits (730), Expect = 0.0
Identities = 1039/1188 (87%), Gaps = 22/1188 (2%)
Strand=Plus/Plus
Query 288 TACTGGTGTTGATAAATTGCCTGAAGAAATGAATGACATGAAAATTCGTGACGATAAAGA 347
||||| |||||||| ||| ||||| || ||||| ||||||||||||| || ||||||||
Sbjct 281 TACTGATGTTGATAGATTACCTGAGGAGATGAAGGACATGAAAATTCAAGATGATAAAGA 340
Query 348 AATGGAAGCGACAGTGGT-AGATGGAAATG-GAACAGAGACTGGACATATCATTGTGACT 405
||||||||| ||| | || | |||| |||| | || |||||||| ||||| || || |||
Sbjct 341 AATGGAAGCTACAATTGTCA-ATGGCAATGTG-ACTGAGACTGGCCATATTATAGTAACT 398
Query 406 ACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTACATGGCTGAGCGTGTT 465
||||| || || ||||||||||| |||||||||||||| || |||||||| ||||| |||
Sbjct 399 ACTATAGGAGGAAGAAATGGCCAGCCAAAACAGACAATCAGTTACATGGCGGAGCGAGTT 458
Query 466 GTTGGTCACGGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTCTT-GAGACAGGAGAAAC 524
||||| ||||| || |||||||||||||| || ||||| || ||| || || ||||||||
Sbjct 459 GTTGGACACGGCTCCTTTGGTGTTGTGTTTCAGGCGAAGTG-CTTGGAAACTGGAGAAAC 517
Query 525 TGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAACCGTGAGCTTCAAACCAT 584
||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| ||
Sbjct 518 TGTTGCGATAAAGAAAGTTCTGCAAGATCGGAGGTACAAGAACCGTGAGCTTCAAACAAT 577
Query 585 GAGGCTACTTGACCATCCTAATGTTGTGTCTCTGAAACATTGTTTCTTCTCAACCACTGA 644
|||||||||||||||||| |||||||||||| |||||||||| |||||||| || |||||
Sbjct 578 GAGGCTACTTGACCATCCGAATGTTGTGTCTTTGAAACATTGCTTCTTCTCTACAACTGA 637
Query 645 AAAAGATGAGCTTTACCTCAATCTT-GTTCTTGAGTACGTTCCAGAAACTGTTCATCGTG 703
|||||| |||||||| || || ||| || || || ||||||||||||||||| ||||| |
Sbjct 638 AAAAGACGAGCTTTATCTTAA-CTTGGTCCTGGAATACGTTCCAGAAACTGTGCATCGCG 696
Query 704 TTATCAAACACTACAACAAACTGAATCAGA-GAATGCCTCTTATATACGTCAAACTTTAC 762
| |||||||||||||||||||| || || | |||||||||| | |||||||||||||||
Sbjct 697 TCATCAAACACTACAACAAACTTAACCA-ACGAATGCCTCTCGTTTACGTCAAACTTTAC 755
Query 763 ACTTATCAGATTTTTAGAG-CCTTATCTTACATTCACCGATGCATTGGTGTGTGTCATCG 821
|| |||||||||||||| | |||| || |||||||||||||| || ||||||||||||||
Sbjct 756 ACATATCAGATTTTTAG-GTCCTTGTCCTACATTCACCGATGTATCGGTGTGTGTCATCG 814
Query 822 TGACATAAAACCTCAAAACTTGTTGGTAAATCCGCACACTCATCAAGT-AAAGCTATGTG 880
||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |
Sbjct 815 TGACATAAAACCTCAAAACTTGTTGGTAAATCCACACACTCATCAAGTGAAA-CTATGCG 873
Query 881 ATTTTGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAACATTTCCTACATCTGCTCGA 940
||||||||||||| |||||||||||||||||||| ||||||||||| || || ||||| |
Sbjct 874 ATTTTGGAAGTGCGAAAGTATTGGTAAAAGGAGAGCCAAACATTTCATATATTTGCTCAA 933
Query 941 GGTATTACAGAGCACCTGAACTTATTTTTGGAGCAACCGAGTATACGACAGCCATTGATG 1000
||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||
Sbjct 934 GGTATTACAGAGCACCTGAGCTCATTTTTGGAGCCACCGAGTATACTACAGCCATTGATG 993
Query 1001 TCTGGTCTGCAGGATGTGTTCTAGCTGAACTA-TTGCTTGGACAGCCCTTGTTCCCTGGT 1059
|||||||||||||||||||||| || || || || || || ||||| ||||||||||||
Sbjct 994 TCTGGTCTGCAGGATGTGTTCTCGCCGAGCTTCTT-CTCGGGCAGCCATTGTTCCCTGGT 1052
Query 1060 GAGAGCGGTGTTGATCAACTTGTAGAGATTATCAAGGTCTTGGGAACGCCTACTAGAGAA 1119
|||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||||
Sbjct 1053 GAGAGCGGTGTTGATCAACTTGTAGAGATTATAAAGGTTTTGGGAACACCAACAAGAGAA 1112
Query 1120 GAAATCAAGTGCATGAACCCAAACTACACGGAATTCAAATTCCCTCAGATTAAAGCTCAT 1179
|||||||| |||||||||||||| ||||| || |||||||| |||||||| |||||||||
Sbjct 1113 GAAATCAAATGCATGAACCCAAATTACACAGAGTTCAAATTTCCTCAGATAAAAGCTCAT 1172
Query 1180 CCATGGCACAAGATTTTCCACAA-ACGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAG 1238
|||||||| ||||| |||||||| | | ||||||||||||||||||||||| ||||||||
Sbjct 1173 CCATGGCATAAGATATTCCACAAGA-GAATGCCTCCAGAAGCTGTTGATTTAGTCTCAAG 1231
Query 1239 ACTTCTTCAATACTCTCCTAATCTACGAAGTGCCGCTCTCGACACATTAGTCCACCCATT 1298
||||||||||||||||| ||||| || |||| ||||| || |||| |||||||||||
Sbjct 1232 GCTTCTTCAATACTCTCCCAATCTCCGTTGTGCTGCTCTTGATTCATTGGTCCACCCATT 1291
Query 1299 CTTTGATGAGTTAAGAGACCCAAACGCACG-TCTACCTAATGGACGTTTCCTTCCACCGC 1357
|||||| ||| ||||||| || || || || | |||| || |||||||||||||||||||
Sbjct 1292 CTTTGACGAGCTAAGAGATCCGAATGCGCGAT-TACCCAACGGACGTTTCCTTCCACCGC 1350
Query 1358 TTTTCAACTTCAAGCCTCACGAGCTGAAAGGTGTACCAT-TGGAGATGGTAGCTAAGTTA 1416
| |||||||| |||||||| ||||| |||||||| || | |||||||||| |||||||||
Sbjct 1351 TCTTCAACTTTAAGCCTCATGAGCTTAAAGGTGTGCC-TGTGGAGATGGTGGCTAAGTTA 1409
Query 1417 GTACCTGAGCATGCAAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTT 1464
|| || || ||||| |||||||| ||||| ||||| ||||||||||||
Sbjct 1410 GTTCCAGAACATGCGAGGAAGCAATGTCCGTGGCTTGGTTTGTGATTT 1457
> Ahg933625 jgi|Araly1|933625|scaffold_401613.1
Length=1279
Score = 453 bits (245), Expect = 2e-126
Identities = 689/899 (77%), Gaps = 48/899 (5%)
Strand=Plus/Plus
Query 391 CATATCA-TTGTGACTACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTA 449
||||||| || | ||||| |||||||| | |||||| |||| |||||||| ||||| ||
Sbjct 177 CATATCATTTCT-ACTACAATTGGTGGCAAAAATGGTGAACCTAAACAGACTATTAGTTA 235
Query 450 CATGGCTGAGCGTGTTGTTGGTCAC-GGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTC 508
|||||| || || |||||||| || ||||| || || |||| ||||| || ||||| |
Sbjct 236 CATGGCCGAACGGGTTGTTGG-AACAGGATCATTCGGAATTGTATTCCAGGCAAAATG-C 293
Query 509 TT-GAGACAGGAGAAACTGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAAC 567
|| || || |||||| | || || || ||||| ||||| |||||| | | || || |||
Sbjct 294 TTGGAAACTGGAGAATCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGCTATAAAAAC 353
Query 568 CGTGAGCTT-CAAACCATGAGGCTACTTGACCATCCTAATGTTGTGT-CTCTGAAACATT 625
|| ||| || ||| ||| | ||| | ||||| || ||||| || | || |||| ||||
Sbjct 354 CGAGAG-TTACAATTAATGCGACTAATGGACCACCCAAATGTGGTTTCCT-TGAAGCATT 411
Query 626 GTTTC-T-TCT-CAACCACTGAAAAAGATGAGCT-TTACCTCAATCTTGTTCTTGAGTAC 681
||||| | ||| |||||||| | ||||||||| || ||||||||| ||| | |||||
Sbjct 412 GTTTCTTCTCTACAACCACT---AGAGATGAGCTCTT-CCTCAATCTGGTTATGGAGTAT 467
Query 682 GTTCCAGA-A-ACTGTTCATCGTGTTATCAAACACTACAACAAACT-GAATCAGAGAATG 738
|| ||||| | ||| | | || ||| | || ||||| || | || ||| | |||
Sbjct 468 GTACCAGAGACGCTG-T-ACCGGGTTTTGAAGCACTA-TACTGGTTCAAACCAGCGGATG 524
Query 739 CCTCTTATATACGTCAAACTTTACACTTATCAGATTTTTAGAGCCTTATCTTACATTCAC 798
||| || | || |||||||||||||| || || || || |||| ||| |||| | || |
Sbjct 525 CCTATTTTCTATGTCAAACTTTACACATACCAAATCTTCAGAGGCTTGGCTTATA-TC-C 582
Query 799 CGA-TGCAT--TGGTGTGTGTCATC-GTGACATAAAACCTCAAAA-CTTGTTGGTAAATC 853
| ||| | |||||| || || | | || | ||||||||||| ||| ||||| |||
Sbjct 583 ATACTGC-TCCTGGTGTCTGCCA-CAGAGATGTGAAACCTCAAAATCTT-TTGGTTGATC 639
Query 854 CGCACACTCATCAAGT-AAAGCTATGTGATTTTGGAAGTGCAAAAGTATTGGTAAAAGGA 912
| | ||| |||| ||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 640 CCCTCACCCATC-AGTGTAAGCTCTGTGATTTTGGAAGTGCAAAAGTATTGGTGAAAGGT 698
Query 913 GAACCAAACATTTCCTACATCTGCTCGAGGTATTACAGAGCACCTGAACTTATTTTTGGA 972
||| ||||||| || || ||||| || |||||||| |||| || ||||| || |||||
Sbjct 699 GAAGCAAACATATCATATATCTGTTCTCGGTATTACCGAGCTCCAGAACTCATCTTTGGG 758
Query 973 GCAACCGAGTATACGA-CAGCCATTGATGTCTGGTCTGCAGGATGTGTTCTAGCTGAACT 1031
|| || |||||||| | || |||||||| | |||||||| || |||||||| || || ||
Sbjct 759 GCTACAGAGTATAC-ATCATCCATTGATATATGGTCTGCTGGTTGTGTTCTGGCAGAGCT 817
Query 1032 ATTGCTTGGACAGCCCTTGTTCCCTGGTGAGAGCGGTGTTGATCAACTTGTAGAGATTAT 1091
| ||||| ||||| || ||||| || |||| | ||| ||||| || || ||||| ||
Sbjct 818 CCTACTTGGCCAGCCGTTATTCCCCGGAGAGAACTCTGTGGATCAGCTAGTGGAGATCAT 877
Query 1092 CAAGGT-CTTGGGAACGCCTACTAGAGAAGAAAT-CAAGTGCATGAACCCAAACTACACG 1149
||||| ||||| | | || ||| |||||||||| | | ||||||||||||||||||||
Sbjct 878 AAAGGTTCTTGGTA-CTCCAACTCGAGAAGAAATTCGA-TGCATGAACCCAAACTACACC 935
Query 1150 GAATTCAAATTCCCTCAGATTAAAGCTCATCCATGGCACAAGATTTTCCACAAACGCATG 1209
|| |||| |||||| || || |||||||| || ||||| ||| |||||||||| || |||
Sbjct 936 GACTTCAGATTCCCACAAATCAAAGCTCACCCTTGGCATAAGGTTTTCCACAAGCGGATG 995
Query 1210 CCTCCAGAAGCTGTTGATTTGG--TCTCAAGACTTCTTCAATACTCTCCTAA-TCTACG 1265
||||||||||| |||| | | |||| |||||||||||||||| || || ||||||
Sbjct 996 CCTCCAGAAGCCATTGACCTCGCATCTC--GACTTCTTCAATACTCACC-AAGTCTACG 1051
> Ahg470656 jgi|Araly1|470656|fgenesh2_kg.1__610__AT1G06390.1
Length=1604
Score = 375 bits (203), Expect = 4e-103
Identities = 754/1013 (74%), Gaps = 66/1013 (7%)
Strand=Plus/Plus
Query 391 CATATCATTGT-GACTACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTA 449
||||||||| | ||||| ||||| || | |||||| |||| || ||||| ||||| ||
Sbjct 199 CATATCATT-TCCACTACCATTGGGGGCAAAAATGGTGAACCGAAGCAGACCATTAGTTA 257
Query 450 CATGGCTGAGCGTGTTGTTGGTCAC-GGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTC 508
|||||||||||| |||||||| || || || || || |||| ||||| |||||||| |
Sbjct 258 CATGGCTGAGCGGGTTGTTGG-AACAGGTTCATTCGGAATTGTTTTCCAGGCGAAATG-C 315
Query 509 TT-GAGACAGGAGAAACTGTTGCGA-TAAAGAAAGTTTTACAAGATAGGA-GGTACAAGA 565
|| || || |||||| | || || | |||| || || || |||||| || | ||||| |
Sbjct 316 TTGGAAACTGGAGAATCAGTAGCCATTAAA-AAGGTCTTGCAAGAT-CGACGCTACAAAA 373
Query 566 ACCGTGAGCTT-CAAAC-CATGAGGCTACTTGACCATCCTAATGTTGTGT-CTCTGAAAC 622
|||||||| || | ||| ||| | | | | || || || ||||| | | || |||| |
Sbjct 374 ACCGTGAG-TTGC-AACTAATGCGACCAATGGATCACCCAAATGTCATCTCCT-TGAAGC 430
Query 623 ATTGTTTCTTCTCAACCACTGAA--AAAGATGAGCT-TTACCTCAATCTTGTTCTTGAGT 679
||||||||||||| || || || | ||||||||| || |||||| |||||| | ||||
Sbjct 431 ATTGTTTCTTCTCTACAAC--AAGTAGAGATGAGCTCTT-CCTCAACCTTGTTATGGAGT 487
Query 680 ACGTTCCAGAAACTGTT-CATCGTGTTATCAAACACTACAACAAACT-GAATCAGAGAAT 737
| || || || ||| || | || ||| | | ||||| || | | |||||||| ||
Sbjct 488 ATGTACCTGAGACT-TTGTACCGGGTTTTGAGGCACTA-TACTAGTTCAAATCAGAGGAT 545
Query 738 GCCTCTTATATACGTCAAACTTTACACTTATCAGATTTTTAGAGCCTTATCTTACATTC- 796
||| || | || |||||||||||||| ||||| || ||||||| || ||||||| |
Sbjct 546 GCCAATTTTCTATGTCAAACTTTACACATATCAAATCTTTAGAGGTTTGGCTTACATCCA 605
Query 797 -ACCGATGCATTGGTGTGTGTCATC-GTGACATAAAACCTCAAAACT-TGTTGGTAAATC 853
|| | | | ||||| || || | | || | ||||| ||||| | ||||||| |||
Sbjct 606 TACTG-TTC-CCGGTGTTTGCCA-CAGAGATGTGAAACCACAAAA-TCTGTTGGTTGATC 661
Query 854 CGC-ACACTCATCAAGTAAAGCTATGTGATTTTGGAAGTGCAAAAGTATTGGTAAAAGGA 912
| | || ||||| || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 662 C-CTTGACCCATCAGGTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTATTGGTCAAAGGT 720
Query 913 GAACCAAACATTTCCTACATCTGCTCGAGGTATTA-CAGAGCACCTGAACTTATTTTTGG 971
||| ||||||| || || |||||||| | ||||| | |||| || ||||| || |||||
Sbjct 721 GAAGCAAACATATCATATATCTGCTCCCGTTATTATC-GAGCTCCAGAACTCATCTTTGG 779
Query 972 AGCAACCGAGTATAC-GACAGCCATTGATGTCTGGTCTGCAGGATGTGTTCTAGCTGAAC 1030
|| || |||||||| | || |||| ||| | ||||| || || |||||||| || || |
Sbjct 780 CGCCACAGAGTATACAG-CATCCATAGATATATGGTCCGCTGGTTGTGTTCTGGCAGAGC 838
Query 1031 TA-TTGCTTGGACAGCCCTTGTTCCCTGGTGAGAGCGGTGTTGATCAACTTGTAGAGATT 1089
| || ||||| ||||| || || || || || | |||||||| ||||| |||||
Sbjct 839 TTCTT-CTTGGCCAGCCGTTATTTCCAGGAGAAAATTCAGTTGATCAGCTTGTGGAGATC 897
Query 1090 ATCAAGGT-CTTGGGAACGCCTACTAGAGAAGAAAT-CAAGTGCATGAACCCAAACTACA 1147
|| ||||| ||||| | | || ||| | |||||||| | | || ||||||||||||||||
Sbjct 898 ATAAAGGTTCTTGGTA-CTCCAACTCGTGAAGAAATTCGA-TGTATGAACCCAAACTACA 955
Query 1148 CGGAATTCAAATTCCCTCAGATTAAAGCTCATCCATGGCACAAGATTTTCCACAAACGCA 1207
| || || | ||||| || || |||||||| || ||| ||||| |||| || || || |
Sbjct 956 CAGACTTTAGGTTCCCACAAATCAAAGCTCACCCTTGGTACAAGGTTTTTCATAAGCGGA 1015
Query 1208 TGCCTCCAGAAGCTGTTGAT-TTGG-TCTCAAGACTTCTTCAATACTCTCCTAATC-TAC 1264
||||||||||||| |||| ||| |||| | ||||||||||| || || || | |||
Sbjct 1016 TGCCTCCAGAAGCCATTGACCTTGCATCTCG-G-CTTCTTCAATATTCACC-AAGCCTAC 1072
Query 1265 GAAGTGC-C-GCTCTCGACA-CAT-TAGTCCACCCATTCTTTGA-TGAGTTAAGAGACCC 1319
| ||| | || ||||| | ||| | | ||| || || ||| | ||| | |||| ||
Sbjct 1073 GC--TGCACTGCGCTCGA-AGCATGT-GCCCATCCGTT-TTTCAATGAACTCCGAGAGCC 1127
Query 1320 AAACGCACGTCTACCTAATGGACGTTTCC-TT-CCACCGCTTTTCAACTTCAA 1370
|||||| ||||| || ||||| ||| || || || || || ||||| |||||
Sbjct 1128 AAACGCCCGTCTTCCAAATGGTCGT--CCATTACCGCCACTGTTCAATTTCAA 1178
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62468001800
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5