BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G27010.1
Length=2592
Score E
Sequences producing significant alignments: (Bits) Value
Ahg326918 jgi|Araly1|326918|fgenesh1_pm.C_scaffold_6002138 3291 0.0
Ahg932954 jgi|Araly1|932954|scaffold_400942.1 2254 0.0
Ahg487444 jgi|Araly1|487444|fgenesh2_kg.6__578__AT5G06350.1 2060 0.0
> Ahg326918 jgi|Araly1|326918|fgenesh1_pm.C_scaffold_6002138
Length=2586
Score = 3291 bits (1782), Expect = 0.0
Identities = 2352/2621 (90%), Gaps = 64/2621 (2%)
Strand=Plus/Plus
Query 1 ATGTCTCGCTCCAAGGCTCCTGCAAGGAAGCAGCAAAAGAAAGGAATCGATTTCAAGAAA 60
||| |||||||||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGGCTCGCTCCAAGGGTCTTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAA 60
Query 61 ATCAAGAGAAAGCTCGGG-AGAAAATTACCTCCACCAAATAATGCAACTAACACAGAGAT 119
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 ATCAAGAGAAAGCT-GGGAAGAAAATTACCTCCACCAAATAATGCAACTAACACCGAGAT 119
Query 120 TAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGAAAGAGATGGCTTCGC 179
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct 120 TAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGAAAAAGATGGTTTAGC 179
Query 180 TACAAGTAAGAAAGGTTTGACCTTGCTTGAGCTTAAG-AACCGAACTGGGCATCCCAATG 238
||||||||| ||||| ||||||||| || ||| || | |||||| |||| |||||
Sbjct 180 TACAAGTAAAAAAGGCTTGACCTTGAAGGAACTTCAGCTA-CGAACTTCACATCACAATG 238
Query 239 CTAAAGTTCGCAAAGATGCATTACATGGTATCAAAGATCTTTTAAAACATCATCCTGCAG 298
||||||||| ||||||| ||||||||||| || |||| ||||| ||||||||||| ||||
Sbjct 239 CTAAAGTTCTCAAAGATACATTACATGGTTTCCAAGACCTTTTTAAACATCATCCAGCAG 298
Query 299 AGCTGCTGTCAAATAAATATGCTACT-ACACA-TAAACTTAGAGAACTCATTACTGATGA 356
|||||| |||||||||||| || | | ||| | |||||| ||||||||| | ||||
Sbjct 299 AGCTGCAATCAAATAAATATACT-GTCATACAGT-GTCTTAGAAAACTCATTAGTCATGA 356
Query 357 TGATAAGTTAGTAAGAGACGATTTTTAT-ACACTA-TT-G-ACTGGGATCTTTCTTGCTT 412
|||| |||||| ||||| | ||||||| | |||| || | ||| |||||||| |||||
Sbjct 357 TGATGGGTTAGTGAGAGAAGCTTTTTATGA-ACTATTTAGAACTCAGATCTTTCGTGCTT 415
Query 413 GTAAAGAGGATATTAACAAGGGTCTTATGGTTTCAAGTTTGATGCCATACATATTTACCG 472
||||||||| | ||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct 416 GTAAAGAGG--A-TAACAAGGGCCTTATGGTGTCACTTTTGATGCCATACATATTTACCG 472
Query 473 CTATGACTAAGTCATCTATTGAAGTTCGTTTGATGGCTTTCAAATTTTTCCGCCTTGTTT 532
|||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct 473 CTATGACTAATTCATCTATTGATGTTCGTTTGATGGCTTTCAATTTTTTCCACCTTGTTT 532
Query 533 TGGAGTTTTACTCGCCTACCTTCTCCTTATATGCTGAAAAGATTCTCGAAAACTACAAGG 592
|||||| |||| ||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 533 TGGAGTATTACCCGCCTACGTTTTCCTTATATGCTGAAAAGATTCTTGAAAACTACAAGG 592
Query 593 ATGTTATTCATAATAACCATTTTTATATACAAGATAAAAAGAAGCTTA-AGGTAGTTCTT 651
|||||||||| || |||||||||||| ||||||||||||| |||| || |||||||||||
Sbjct 593 ATGTTATTCAGAAAAACCATTTTTATGTACAAGATAAAAACAAGC-TAGAGGTAGTTCTT 651
Query 652 TTGGGGTTGGCAGATTGCTTGTCGCTGTTGCCATGTGATCAGAGCGACAATGAATCAAAG 711
| ||||||||| |||||||||||||||||||||||||| ||||| | | ||| ||| ||
Sbjct 652 TCCGGGTTGGCACATTGCTTGTCGCTGTTGCCATGTGATGAGAGCAATACTGATTCACAG 711
Query 712 AAAAAGGGACTTTTACAGTATGAAACGCTACTCGCCTGTGAGCAAGATGCTGCGAAAGAA 771
| || | || |||||||||||||||||| |||| |||||||||||||||||
Sbjct 712 ----A--GA-----A-AGAATGAAACGCTACTCGCCTATGAGGAAGATGCTGCGAAAGAA 759
Query 772 TGTGTTCGTTTTGCCCATGTCTCTGGGATACTGAAGGAGATTGTTGCAGTCTTAATCAAT 831
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 760 TGTGTTCGTTTTGCCCATGTCTCTGGGATATTGAAGGAGATTGTTGGAGTCTTAATCAAT 819
Query 832 TGTTTCCAAGATTTCCTTCCATTAATTCATGCTTCGCAAAGAATCAATAAAGAATCATTT 891
||||||||||||||| ||||||| ||||| || ||| | || |||||||| | ||||||
Sbjct 820 TGTTTCCAAGATTTCATTCCATTGATTCAAACTCCGCGAGGATTCAATAAACATTCATTT 879
Query 892 GATTGCATCCGCCATATACTTCGTAGCATAGGTTATGCAATCAAGTTTTCCATTCGTAGG 951
|||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 880 GATTGCATACTCCATATACTTCGCAGCATAGGTTATGCAATCAAGTTTTCCATTCGTAGG 939
Query 952 CACACTCAAAGACACACTAAATGGCTACCTTCACCTGAAGAAAATACTCTGATGATACTG 1011
||| |||||||||| ||| |||||||||| || |||||||||||||||| |||||| ||
Sbjct 940 CACTCTCAAAGACAGGCTACATGGCTACCTGCATCTGAAGAAAATACTCTTATGATATTG 999
Query 1012 GAT-CGTGACATTGCATCAATGTTATCGAAAAAGTTACTTGGTTCTTTTCCACTTAATCA 1070
||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1000 GATCCGT-ACATTGCATCATTGTTATCGAAAAAGTTACTTGGTTCTTTTCCCCTTAATTG 1058
Query 1071 CGAAAACAATTTTTCT-----GTA-GA-GAA--CAATGGTGTATTGACAGAAATCTTTTT 1121
|||||||||| ||||| | | || ||| ||| |||| ||||||||||| |||||
Sbjct 1059 CGAAAACAATCTTTCTGGAAAGAATGATGAACTCAACAGTGTTTTGACAGAAATATTTTT 1118
Query 1122 GGAAGTAAGTGAATGGAGCCA-CCTTCCTTGTGATCTTTCCAATAGATTTCTAGAATTTA 1180
|||||||||||||||||| || |||||||| | ||||||||||||||||||| ||||||
Sbjct 1119 GGAAGTAAGTGAATGGAG-CAGCCTTCCTTCTAATCTTTCCAATAGATTTCTGGAATTTC 1177
Query 1181 TTGAGAATGCCTTACTAGGAAAGATCACCAGAAGCAAT-AGTCTTGA-TAAGACTTTACT 1238
||||||||||| ||| ||| ||||||||||| |||||| || ||| | ||||| ||||||
Sbjct 1178 TTGAGAATGCCCTACAAGGCAAGATCACCAGGAGCAATAAG-CTT-AGTAAGAGTTTACT 1235
Query 1239 TGCACTCTTGCCCTTTGTTCCAAAACTTCTTCTGAGGGTGGACCGTGATCGGAGAGATAA 1298
| ||||||||||||||||||| |||||| || |||||||||||| ||||| |||||||||
Sbjct 1236 TTCACTCTTGCCCTTTGTTCCGAAACTTATTTTGAGGGTGGACCATGATCAGAGAGATAA 1295
Query 1299 TCTTATGCAGGCATTTACTATTACCTTCAACAATTGCAAACCAGAGTCTTCACTTAAATT 1358
|||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct 1296 TCTTATGCAGGCATTTACTATTACCTTCAATGATTGCAAACCAGACTCTCCACTTAAATT 1355
Query 1359 AGCCTGCATTTCAGTTGTTAAAGATTTGATTATCCCTAATGGAGATATCCTTTATCCCAA 1418
||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||
Sbjct 1356 AGCCTGCATTTCAGTCGTTAAAGATGTGATTATCCATAATGGAGATATCCTTTATCACAA 1415
Query 1419 TGATCCAACCGTAAATAACTACCAGCGCGCTTGGGTCAACAAACTTCCATCACTGCTTAA 1478
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1416 TGATCCAACCGTAAATAACTATCAGCGCGCTTGGGTCAACAAACTTCCGTCACTGCTTAA 1475
Query 1479 CCAGTTGGGTGATAAGCATCATGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCT 1538
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1476 CCAGTTGGGTGATAAGCATCCCGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCT 1535
Query 1539 TGCGCGAGTTGGATGTCTGAATGCTTCTCCAACATTTGAAGAAGAGATAAG-AAGCTTCT 1597
|||||||||||| |||||||||||||| |||||||||||||||||||| || || |||||
Sbjct 1536 TGCGCGAGTTGGGTGTCTGAATGCTTCCCCAACATTTGAAGAAGAGATCAGCAA-CTTCT 1594
Query 1598 TCATCCCTTTTCATGGAGAAGGTGAGGTGCCAGGTGGACCTTTTGTAAGTCTCCCTAGGG 1657
||||||||| ||| ||||||||||| | ||| |||||| |||||| ||||||||||||||
Sbjct 1595 TCATCCCTTGTCAGGGAGAAGGTGATGAGCCTGGTGGAACTTTTGCAAGTCTCCCTAGGG 1654
Query 1658 AAGTACAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCATCATAGACAATTTCAGCTCCC 1717
|||| |||||||||||||||||||||||||||||||||| | |||||||||| |||||||
Sbjct 1655 AAGTCCAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCACCGTAGACAATTTTAGCTCCC 1714
Query 1718 CTATGCTGAAAGCAATAGTTTCATGCTGTTTATATGAACAACTTGAACCAGCTGTGTTGT 1777
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1715 GTATGCTGAAAGCAATAGTTTCATGTTGTTTATATCAACAACTTGAACCAGCTGTGTTGT 1774
Query 1778 ATCGGATAGTGGAAATTCTTCAAACTGCCTATAGAGGTGGATATATTCAGATTACAGATC 1837
||||||||||||||||||||| | ||| |||| || ||||||||| |||||||||||||
Sbjct 1775 TTCGGATAGTGGAAATTCTTCACAGTGCTTATAAAGCTGGATATATCCAGATTACAGATC 1834
Query 1838 ATTTTAGCTTCTTCATTACCTTGATTTCACGTTTCAAAGTTGTCCCAGAGAAACTGAACT 1897
|||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| | |
Sbjct 1835 ATTTCAGCTTCTTCATCACCTTAATTGCACGTTTCAAAGTTGTCCCAGAGAAACTGGAGT 1894
Query 1898 CGGCGATTGAGTGTGATGAG-AGGAAGGCAAATTGTGGCACATTTAAA-ACACTTACAAA 1955
| |||||||||||||||||| ||| || || ||||||||||||||||| | |||||||||
Sbjct 1895 CAGCGATTGAGTGTGATGAGCAGG-AGACATATTGTGGCACATTTAAAGA-ACTTACAAA 1952
Query 1956 CCTTGTGTGCTCATATTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGA 2015
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1953 CCTTGTGTGCTCATGTTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGA 2012
Query 2016 GAAAGTTTTTGTCGAACAAATAATTTTGAAGCCTGCGTTGGACAATGGGTGTGCTATACT 2075
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 2013 GAAAGTTTTTGTTGAACAAATAATTTCGAAGCCTGCGTTGGACAATGGGTGTGCCATACT 2072
Query 2076 CAGGATGATCTGCGCGTTAGACTCTAAACCTACAAGACTTTCTGAAATCAGTGTAACCAC 2135
||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2073 CAGGATGATCTGCACGTTGGACTCTAAACCTACAAGACTTTCTGAAAGCAGTGTAACCA- 2131
Query 2136 TCTAAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAATTGTATACCAGAAGATAA 2195
| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 2132 T--AAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAAATGTAAACCAGAAGATAA 2189
Query 2196 AGAGAGA-TCTTACCTTTATATGCAAACATGTCTGTACTATTTATTACCTTGCTACTTCC 2254
|||| | ||||||||||| || ||||||||||| ||||||||| |||||||||||||||
Sbjct 2190 GGAGA-ACTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTACCTTGCTACTTCC 2248
Query 2255 TGTTCGACCGGAGCTCCAAACTCACAGAACAGGTTCTGAAAAGAATGCGATCT-ATGGTT 2313
|||||||||| ||||||||||||||||||||||||||||||||| || | | | ||||||
Sbjct 2249 TGTTCGACCGAAGCTCCAAACTCACAGAACAGGTTCTGAAAAGATTGAGCT-TGATGGTT 2307
Query 2314 AGTGAAAATG-TAAAAGCATTGGAATCGGTTCAAGACAGGGAGAGTGGTCGAGACTCATT 2372
|||||||| |||| || |||||||||| |||||||||||||| |||| |||||||||
Sbjct 2308 AGTGAAAACACTAAA-GCGCTGGAATCGGTCCAAGACAGGGAGAGCGGTCAAGACTCATT 2366
Query 2373 GAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACAACGATGTCAAAGTTAG 2432
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2367 GAATTTGATACAATGCATTATCTCTGTGATCCTGCTGATGCACAACGACGTCAAAGTTAG 2426
Query 2433 GAAGATAATATCATCATCCAAGTCAGAGATTGATTTGATTCTGCAGAACGTT-TACACAT 2491
||||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||| |
Sbjct 2427 GAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGCAGAACGTTAT-CACGT 2485
Query 2492 TGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCATATGATGAAAATTGCAG 2551
||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||
Sbjct 2486 TGCAGGCCTCACGAAGCACGAGCTTGATTGTAGAAGGAAAACATATGATGAAAATCGCAG 2545
Query 2552 CAGAGCGACTTAGCATTGCATCCAATAGCTTACTCGCATAA 2592
|||||||||||| ||||||||||| |||||||||||||||
Sbjct 2546 GAGAGCGACTTAGGATTGCATCCAAAAGCTTACTCGCATAA 2586
> Ahg932954 jgi|Araly1|932954|scaffold_400942.1
Length=2659
Score = 2254 bits (1220), Expect = 0.0
Identities = 2186/2628 (83%), Gaps = 163/2628 (6%)
Strand=Plus/Plus
Query 45 AATCGATTTCAAGAAAATCAAGAGAAAGCTCGGGAGAAAATTACCTCCACCAAATAATGC 104
||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 56 AATTGATTTCAAGAAAATCAAGAGAAAGCTGGGGAGAAAATTACCTCCACCAAAAAATGC 115
Query 105 AACTAACACAGAGATTAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGA 164
|||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct 116 AACTAACACAGAGATTAAATCCAAAGAAATTATAATTCCTGAGCAAAGTGTGGCAGCAGA 175
Query 165 AAGAGA-TGGCTTCGCTACAAGTAAGAAAGGTTTGACCTTGCTTGAGCTT-AAGAACCGA 222
|| ||| |||||| ||||||||||| ||| ||||||||| |||||| || | |||
Sbjct 176 AA-AGACTGGCTTTGCTACAAGTAATAAAAACTTGACCTTGGAGGAGCTTCTAGTA-CGA 233
Query 223 ACTGGGCATCCCAATGCTAAAGTTCGCAAAGATGCATTACATGGTATCAAAGATCTTTTA 282
| | | |||||||||||||||||||||||| |||| |||| ||||||| |||| ||||||
Sbjct 234 AGTCGTCATCCCAATGCTAAAGTTCGCAAAAATGCGTTACTTGGTATCCAAGACCTTTTA 293
Query 283 AAACA-TCATCCTGCAGAGCTGCTGTCAAATAAATATGCTA-C-TACACATAAACTT-AG 338
||| | |||||| | |||||||| |||||| |||||| ||| | |||| || ||| ||
Sbjct 294 AAA-AGTCATCCAGTAGAGCTGCAGTCAAAGAAATATACTATCATACA-AT-GTCTTAAG 350
Query 339 AGAACTCATTACTGATGATGATAAGTTAGTAAGAGACGATTTTTAT-ACACTA-TTG--A 394
| || ||||| ||||||||||||| ||| ||| | | ||||||| | |||| ||| |
Sbjct 351 -GGACGCATTAATGATGATGATAAGCAAGTGAGAAAAGCTTTTTATGA-ACTATTTGACA 408
Query 395 CTGGGATCTTTC-TTGCTTGT--A-AAGAGGATATTAACAAGGGTCTTATGGTTTCAAGT 450
|| |||||||| || |||| | ||||||||| | |||||| |||||||| ||| |
Sbjct 409 CTCAGATCTTTCGTT-TTTGTAAACAAGAGGATA-T--CAAGGGACTTATGGTGTCACCT 464
Query 451 TTGATGCCATACATATTTAC-CGCTATGACTAAGTCATCT-ATTGAAGTTCGTTT-GATG 507
||||||| || ||||||| | ||||||| |||| |||| | ||||| |||||||| |||
Sbjct 465 TTGATGCTATCCATATTT-CACGCTATGGCTAATTCAT-TGATTGATGTTCGTTTGGAT- 521
Query 508 GCTTTCAAATTTTTCCGCCTTGTTTTGGAGTTTTACTCGCCTACCTTCTCCTTATATGCT 567
|||||| ||||| | ||||||| |||| | ||| ||||| | || ||| | ||| ||
Sbjct 522 GCTTTCGCTTTTTTACACCTTGTTGTGGACTACTACCCGCCTTCATTTTCCATGTATCCT 581
Query 568 GAAAAGATTCTCGAAAACTACAAGG--AT-GTTATTCATAATAACCATTTTTATATACAA 624
||| ||||||| ||||||||||||| || ||||||| | |||||||||||| | |||
Sbjct 582 GAAGAGATTCTTGAAAACTACAAGGATATCATTATTCAGAGCAACCATTTTTATGTGCAA 641
Query 625 GATAAAAAGAAGCTTAAGGTAGTTCTTTTGGGGTTGGCAGATTGCTTGTCGCTGTTGCCA 684
||||||| || || ||||||| ||||| |||||| || ||||| | ||||||||||||
Sbjct 642 GATAAAACCAATCTAAAGGTAGCTCTTTCCGGGTTGTCACATTGCCTCTCGCTGTTGCCA 701
Query 685 TGTGATCAGAGCGACAATGAATCAAAGAAAAAGGGACTTT--TACAGTATGAAACGCTAC 742
|||||| ||| | ||| ||||| ||||||| | | ||| ||| ||||||| ||||
Sbjct 702 TGTGATGAGATCCACACCAAATCACAGAAAAA-GCA-TTTCCAACAAAATGAAACCCTAC 759
Query 743 TCGCCTGTGAGCAAGATGCTGCGAAAGAATGTGTTCGTTTTGCCCATGTCTCTGGGATAC 802
|||||| ||||||||||||||| |||||| | |||||||||| ||||||| || |
Sbjct 760 TCGCCTATGAGCAAGATGCTGCAAAAGAA---G---GTTTTGCCCACGTCTCTGTGAGAT 813
Query 803 TGAAGGAGATTGTTGCAGTCTTAATCAATTGTTTCCAAGATTTCCTTCCATTAATTCATG 862
||||||||||||||| || ||||||||||||||||||||||||| ||||| | ||| ||
Sbjct 814 TGAAGGAGATTGTTGGAGCCTTAATCAATTGTTTCCAAGATTTCATTCCACTGCTTCGTG 873
Query 863 CTTCGCAAAGAATCAATAAAGAATCA-T--TTGATTGCATCCGCCATATACTTC-GTAGC 918
|| | | | || | || | ||||| | |||||||| | | |||||| | || | |||
Sbjct 874 CTCCACGAGGATTGGATCCACAATCATTAATTGATTGCGTGCACCATAT-CCTCTGCAGC 932
Query 919 ATAGGTTATGCAATCAAGTTTTCCATTCGTAGGCACACTCAAAGACACACTAAATGGCTA 978
||| ||||||| |||||| || ||| |||||||| ||||||| | | | || |
Sbjct 933 ATATGTTATGCCATCAAG--TT---TTC----GCACACTC--AGACACA-T-ACT-GC-A 977
Query 979 CCTTCACCTGAAGAAAATACTCTGATGATACTGGATCGTGACATTGCATCAATGTTATCG 1038
|| | |||||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct 978 ACTGAAGAAGAAGAAGTTACTCTGATGAAACTGGATCACCACATTTCATCAATGTTATCA 1037
Query 1039 AAAAAGTTACTTGGTTCTTTTCCACTTAATCACGAAAA-CAATTTTTCT-----G--T-A 1089
||||||||||||| ||||||||| |||| || | |||| | ||||| | | |
Sbjct 1038 AAAAAGTTACTTGCTTCTTTTCCCCTTATTC-CCAAAATCTGCGTTTCTAAAAGGAATGA 1096
Query 1090 -G--AG--A----A----CAATGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATG 1136
| || | | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1097 TGAAAGCTACTTTATCCTCAACGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATG 1156
Query 1137 GAGCCACCTTCCTTGTGATCTTTCCAATAGATTTCTAGAATTTATTGAGAATGCCTTACT 1196
|||||||||||||||||| |||||| |||||||||| ||||||||||||||| || ||||
Sbjct 1157 GAGCCACCTTCCTTGTGACCTTTCCTATAGATTTCTGGAATTTATTGAGAATACCCTACT 1216
Query 1197 AGGAAAGATCACCAGAAGCAATAGT----C--TT---G-ATAAGACTTTACTTGCACTCT 1246
||| ||||||| ||| |||| |||| | || | | ||| |||| |||||||||
Sbjct 1217 AGGCAAGATCATCAGGAGCATTAGTCCACCTATTCACGAAAAAG-CTTTGCTTGCACTCG 1275
Query 1247 TGCCCTTTGTTCCAAAACTT-CTTCTGAGGGTGGACCGTGATCGGAGAGATAATCTTATG 1305
|||| ||||||||||||||| ||| ||||||||||||||||| |||||||||| || |||
Sbjct 1276 TGCCTTTTGTTCCAAAACTTACTT-TGAGGGTGGACCGTGATTGGAGAGATAAACTGATG 1334
Query 1306 CAGGCATTTACTATTACCTTCAA-CAATTGCAAACCAGAGTCTTCACTTAAATTAGCCTG 1364
||||| || ||||||| ||| || | ||||||||||||||||| ||||| ||||||||||
Sbjct 1335 CAGGCGTTCACTATTA-CTTTAAGCGATTGCAAACCAGAGTCTCCACTTCAATTAGCCTG 1393
Query 1365 CATTTCAGTTGTTAAAGATTTGATTATCCCTAATGGAGATATCCTTTATCCCAATGATCC 1424
||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1394 CATTTCAATTGTTAGAGAACTGATTATCCCTAATGGAAATATCCTTTATCCCAATGATCC 1453
Query 1425 AACCGTAAATAACTACCAGCGCGCTTGGGTCAACAAACTTCCATCACTGCTTAACCAGTT 1484
||||||| ||||||||||||| |||||||||||||||||||| ||||||||| | |||||
Sbjct 1454 AACCGTAGATAACTACCAGCGTGCTTGGGTCAACAAACTTCCGTCACTGCTTCATCAGTT 1513
Query 1485 GGGTGATAAGCATCATGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCTTGCGCG 1544
|||||||||||||| || |||||| |||||||||||||||||||||| ||||||| |||
Sbjct 1514 GGGTGATAAGCATCCCGTTTCTACCCAGGTTGTTTTGCAACTTTTGCTTGACCTTGGGCG 1573
Query 1545 AGTTGGATGTCT---GAATGCTTCTCCAACATTTGAAGAA-GAGATAAGAAGCTTCTTCA 1600
|||||| | ||| |||| |||| || ||||||||||| | | | |||| ||||||||
Sbjct 1574 AGTTGGGTTTCTGAAGAATACTTCCCCTGCATTTGAAGAAGGCG-TCAGAAACTTCTTCA 1632
Query 1601 TCCCTTTTCATGGAGAAGGTGAGGTGCCAGGTGGACCTTTTGTAAGTCTCCCTAGGGAAG 1660
||||| ||| ||||||||||| ||||| |||||||| |||| |||||||||||||||||
Sbjct 1633 ACCCTTATCAGGGAGAAGGTGATGTGCCTGGTGGACCATTTGCAAGTCTCCCTAGGGAAG 1692
Query 1661 TACAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCATCATAGACAATTTCAGCTCCCCTA 1720
|||||| | ||||||| ||||||||||||||||| ||||||| |||||||||||||||
Sbjct 1693 CCCAAGAACTTGCTCTCTCTTTCCTTTACTACTTCACCATAGACCATTTCAGCTCCCCTA 1752
Query 1721 TGCTGAAAGCAATAGTTTCATGCTGTTTATATGAACAACTTGAACCAGCTGTGTTGTATC 1780
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1753 TGCTGAGAGCAATAGTTTCATGCTGTTTATATGAACAACTTAAACCAGCTGTGTTGTATC 1812
Query 1781 GGATAGTGGAAATTCTTCAAACTGCCTATAGAGGTGGATATATTCAGATTACAGATCATT 1840
||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1813 GGATAGTGGAAATTCTTCACACTGCGTATAGAGATGGATATATTCAGATTACAGATCATT 1872
Query 1841 TTAGCTTCTTCATTAC-CTTGATTTCACGTTTCAAAGTTGTCCCAG-AGAAACTGAACTC 1898
||||||||||||| || || ||| | ||||||||||||||||| ||| | ||
Sbjct 1873 TTAGCTTCTTCATCACTCTA-ATTGCGCGTTTCAAAGTTGTCCCTCCAGAGA-TG----- 1925
Query 1899 GGCGATTGAGTGTGATGAGAGGAAGGCAAATTGTGGCA-CATTTAAAACACTTACAAACC 1957
|| |||||||||||||||| || || | | || |||| ||| ||||||||||||
Sbjct 1926 GG-GATTGAGTGTGATGAGCGGCGGG-AGA------CAACATTCAAAGCACTTACAAACC 1977
Query 1958 TTGTGTGCTCATATTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGA 2017
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1978 TTGTGTGCTCATGTTTGTCAGGAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGA 2037
Query 2018 AAGTTTTTGTCGAACAAATA---A--T--TTT-----GAAGCCTGCGTTGGACAATGGGT 2065
||| |||||||||||||||| | | ||| ||||||||| |||||||||||||
Sbjct 2038 AAGCTTTTGTCGAACAAATAGGCAAATACTTTATTTTGAAGCCTGCTTTGGACAATGGGT 2097
Query 2066 GTG-CTATACTCAGGATGATCTGCGCGTTAGACTCTAAACCTACAAGACTTTCTGAAATC 2124
||| | |||||||||||||||||| |||| ||||||||||| || ||||||||||||| |
Sbjct 2098 GTGGC-ATACTCAGGATGATCTGCACGTTGGACTCTAAACCCACCAGACTTTCTGAAAGC 2156
Query 2125 AGTGTAACCACTCTAAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAATTGTATA 2184
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 2157 AGTGTAACCACTCTAAGTGAATTCTTGCCGGGGTATTTGATGGATATAGTCAATTGTATA 2216
Query 2185 CCAGAAGATAAAGAGA-GA-T-CTTACCTTTATATGCAAACATGTCTGTACTATTTATTA 2241
||||||||||| |||| | | |||||||||| || ||||||||||| ||||||||| ||
Sbjct 2217 CCAGAAGATAAGGAGAAGTCTTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2276
Query 2242 CCTTGCTACTTCCTGTTCGACCGGAGCTCCAAACTCACAGAACAGGTTCTGAAAAGAATG 2301
||||||| || ||||| |||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2277 CCTTGCTTTTTGCTGTTTGACCGGAGCTCCAAACTCACAGAAGAGGTTCTGAAAAGATTG 2336
Query 2302 CGATCT-ATGGTTAGTGAAAATG-TAAAAGC-AT--TGGAATCGGTTCAAGACAGGGAGA 2356
|||| | |||||||||||||| |||| || || ||||||| | | | ||||||
Sbjct 2337 CGAT-TGATGGTTAGTGAAAACACTAAA-GCGATGCTGGAATCAC--CG-GTCTGGGAGA 2391
Query 2357 GTGGTCGAGACTCATTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACA 2416
| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2392 GCAGTCGAAACTTGTTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACA 2451
Query 2417 ACGATGTCAAAGTTAGGAAGATAATATCATCATCCAAGTCAGAGATTGATTTGATTCTGC 2476
|||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 2452 ACGACGTCAGAGTTAGGAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGC 2511
Query 2477 AGAACGTT-TACACATTGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCAT 2535
| | |||| | ||| ||||||||||| || ||| || | | |||||||||||||||
Sbjct 2512 ACAGCGTTGT-CACGTTGCAGTCCTC--GA-GCATGA-C---A--GTAGAAGGAAAGCAT 2561
Query 2536 ATGATGAAAATTGCAGCAGAGCGACTTAGCATTGCATCCAATAGCTTA 2583
|||||||| ||||||| |||||||||||| ||||||||||||||||||
Sbjct 2562 ATGATGAAGATTGCAGGAGAGCGACTTAGGATTGCATCCAATAGCTTA 2609
> Ahg487444 jgi|Araly1|487444|fgenesh2_kg.6__578__AT5G06350.1
Length=2800
Score = 2060 bits (1115), Expect = 0.0
Identities = 1631/1871 (87%), Gaps = 72/1871 (4%)
Strand=Plus/Plus
Query 779 GTTTTGCCCATGTCTCTGGGATACTGAAGGAGATTGTTGCAGTCTTAATCAATTGTTTCC 838
||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||
Sbjct 818 GTTTTGCCCATGTCTGTGGGAGATTGAAGGAGATTGTTGGTGTCTTAATCAATTGTTTCC 877
Query 839 AAGATTTCCTTCCATTAATTCATGCTTCGCAAAGAATCAATAAAGAATCATTTGATTGCA 898
| |||||| ||||||| ||||||||| ||| | || || || ||| |||||||||||||
Sbjct 878 AGGATTTCATTCCATTGATTCATGCTCCGCGAGGATTCGATGCAGATTCATTTGATTGCA 937
Query 899 TCCGCCATATACTTCGTAGCATAGGTTA-TGCAATCAAGTTTTCCATTCGTAGGCACACT 957
| | |||| || |||| |||||||| || ||||||||||||||||||||||||||||| |
Sbjct 938 TACACCATCTATTTCGCAGCATAGG-TATTGCAATCAAGTTTTCCATTCGTAGGCACA-T 995
Query 958 -CAAAGACACACTAAATGGCTACCTTCACCTGAAGAAAATACTCTGATGATACTGGATC- 1015
|||||||| ||| ||||| |||| || |||||||| ||||||||||||| ||||||
Sbjct 996 GCAAAGACAGACTGCATGGCAACCTGCATCTGAAGAAGTTACTCTGATGATATTGGATCA 1055
Query 1016 GTGACATTGCATCAATGTTATCGAAAAAGTTACTTGGTTCTTTTCCACTTAAT-CACGAA 1074
| |||||||||||||| | | ||||| ||||||||||| ||||| || ||| || |||
Sbjct 1056 G-GACATTGCATCAATACTGTTAAAAAAATTACTTGGTTCATTTCCTCTCAATCCA-GAA 1113
Query 1075 AACAAT-TTT-T-------CTG-T---A-G-A---GA-A--CAATGGTGTATTGACAGAA 1113
|||||| ||| | || | | | | | | ||| ||||||||||||||
Sbjct 1114 AACAATCTTTATGGAAAGGGTGATGAAAGGTACTTTACACTCAACAGTGTATTGACAGAA 1173
Query 1114 ATCTTTTTGGAAGTAAGTGAATGGAGCCACCTTCCTTGTGATCTTTCCAATAGATTTCTA 1173
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1174 ATCTTTTTGGAAGTAAGTGAATGGAGCCAACTTCCTACTGATCTTTCCAATAGATTTCTG 1233
Query 1174 GAATTTATTGAGAATGC-CTTACTAGGAAAGATCACC---AG-A--A-GC--A--ATAG- 1220
||||||||||||||| | | ||||||| ||||||||| || | | || | | ||
Sbjct 1234 GAATTTATTGAGAATACAC-TACTAGGCAAGATCACCAGGAGCATTAGGCTTAGTAAAGA 1292
Query 1221 TCTT---GATAAGACTTTACTTGCACTCTTGCCCTTTGTTCCAAAACTTCTTCTGAGGGT 1277
| || || |||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1293 TATTCACGAAAAGACTTTACTTACACTCTTGCCCTTTGTTCCAAAACTTATTCTGAGGGT 1352
Query 1278 GGACCGTGATCGGAGAGATAATCTTATGCAGGCATTTACTATTACCTTCAACAATTGCAA 1337
|||||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||||
Sbjct 1353 GGACCGTGATTGGAGAGATAATCTTCTGCAGGCATTTACTATTGCCTTCAGCGATTGCAA 1412
Query 1338 ACCAGAGTCTTCACTTAAATTAGCCTGCATTTCAGTTGTTAAAGATTTGATTATCCCTAA 1397
|||||||||| ||| |||||||||||||||||| |||||| ||| |||||||||||||
Sbjct 1413 ACCAGAGTCTGAACTCAAATTAGCCTGCATTTCAATTGTTAGAGACATGATTATCCCTAA 1472
Query 1398 TGGAGATATCCT-TTAT-CC----CAA-TGATCCAACCGTAAATAACTACCA-GCGCGCT 1449
|||||||||||| || | || ||| ||||||||| |||||||||||||| | | |||
Sbjct 1473 TGGAGATATCCTCTT-TCCCAATGCAAGTGATCCAACGGTAAATAACTACCAGGTG-GCT 1530
Query 1450 TGGGTCAACAAACTTCCATCACTGCTTAACCAGTTGGGTGATAAGCATCATGTATCTACC 1509
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1531 TGGGTCAACAAACTTCCATCACTGCTTAATCAGTTGGGTGATAAGCATCCCGTATCTACC 1590
Query 1510 AAGGTTGTTTTGCAACTTTTGCTCGACCTTGCGCGAGTTGGATGTCTGAATGCTTCTCCA 1569
|||||||||||||||| || |||||||||| ||||||||| ||||||||| |||| ||
Sbjct 1591 CAGGTTGTTTTGCAACTCTTACTCGACCTTGGGCGAGTTGGGTGTCTGAATACTTCCCCC 1650
Query 1570 ACATTTGAAGAAGAGATAAGAAGCTTCTTCATCCCTTT-TCATGGAGAAGGTGAGGTGCC 1628
|||| |||||| || || |||| |||||||| ||||| ||| ||||||||||| |||||
Sbjct 1651 ACATGTGAAGATGACATCAGAAACTTCTTCA-GCCTTTGTCAGGGAGAAGGTGATGTGCC 1709
Query 1629 AGGTGGACCTTTTGTAAGTCTCCCTAGGGAAGT-ACAAGAAGTGGCTCTCTGTTTCCTTT 1687
||||||||||||| ||||||||| ||||| | |||||| ||||||||||||||||||
Sbjct 1710 CGGTGGACCTTTTGCGAGTCTCCCTCGGGAA-TCCCAAGAACTGGCTCTCTGTTTCCTTT 1768
Query 1688 ACTACTTCATCATAGACAATTTCAGCTCCCCTATGCTGAAAGCAATAGTTTCATGCTGTT 1747
||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 1769 ACTACTTCACCACAGACAAATTCAGCTCCCCTATGATGAAAGCAATAGTTTCATGCTGTT 1828
Query 1748 TATATGAACAACTTGAACCAGCTGTGTTGTATCGGATAGTGGAAATTCTTCAAACTGCCT 1807
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1829 TATATCCACAACTTGAACCAGCTGTGTTGTATCGGATAGTGGAAATTCTTCACACTGCCT 1888
Query 1808 ATAGAGGTGGATATATTCAGATTACAGATCATTTTAGC-TTCTTCATTACCTTGATTTCA 1866
|||||| ||||||||| ||||||||||||||||||||| ||||| || ||||| ||| ||
Sbjct 1889 ATAGAGCTGGATATATCCAGATTACAGATCATTTTAGCTTTCTT-ATCACCTTAATTGCA 1947
Query 1867 CGTTTCAAAGTTGTCCCAGAGAAACTGAACTCGGCGATTGAGTGTGATGAGAGGAAGGCA 1926
||||||||||||| |||||||||||| | || |||| |||||| ||||| || || ||
Sbjct 1948 CGTTTCAAAGTTGCCCCAGAGAAACTTCAGTCACCGATAGAGTGTAATGAGCGGGAGACA 2007
Query 1927 AATTGTGGCACATTTAAA-ACACTTACAAACCTTGTGTGCTCATATTTGTCAGAAATGGG 1985
||||||||||||||||| | | ||||||| ||||||||||||| |||||||||||||||
Sbjct 2008 TATTGTGGCACATTTAAAGA-AGTTACAAAGCTTGTGTGCTCATGTTTGTCAGAAATGGG 2066
Query 1986 TGATAGCTCTCTTGTCCTCCAGATTCTAGAGAAAGTTTTTGTCGAACAAATAATTTTGAA 2045
|||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||
Sbjct 2067 TGATAGTTCTCTTGTCCTTCAGATTGTAGAGAAAGTTTTACTCGAACAAATAATTTTGAA 2126
Query 2046 GCCTGCGTTGGACAATGGGTGTGCTATACTCAGGATGATCTGCGCGTTAGACTCTAAACC 2105
|||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||| ||
Sbjct 2127 GCCTGCTTTGGACAATGGGTGTGCCATACTCAGGATGATCTGCGTGTTGGACTCTACCCC 2186
Query 2106 TA-CAAGACTTTCTGAAATCAGTGTAACCACTCTAAGTGAATTCTTACCGGGATATTTGA 2164
|| | ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||
Sbjct 2187 TATC-AGACTTTCTGAAAGGAGTGTAACCACTCTAAGTGAGTTCTTACCGGGATATATGA 2245
Query 2165 TCGATATAGTCAATTGTATACCAGAAGATAAAGAGAGA-TCTTACCTTTATATGCAAACA 2223
|||| |||||||||||||||||||||||||| |||| | ||||||||||| || ||||||
Sbjct 2246 TCGACATAGTCAATTGTATACCAGAAGATAAGGAGA-ACTCTTACCTTTACATACAAACA 2304
Query 2224 TGTCTGTACTATTTATTACCTTGCTACTTCCTGTTCGACCGGAGCTCCAAACTCACAGAA 2283
||||| ||||||||| |||||||||| ||| ||||| | ||||||||||||||||||||
Sbjct 2305 TGTCTCTACTATTTAGTACCTTGCTATTTCTTGTTCAATCGGAGCTCCAAACTCACAGAG 2364
Query 2284 CAGGTTCTGAAAAGAATGCGATCT-ATGGTTAGTGAAAATGTAAAAGCATTGGAATCGGT 2342
|||||||||| ||||||||||| | ||| |||||||||| ||| || | |||| |||
Sbjct 2365 CAGGTTCTGATAAGAATGCGAT-TAATGATTAGTGAAAACACAAATGCGCTAGAATTGGT 2423
Query 2343 TCAAGACAGGGAGAGTGGTCGAGACTCATTGAATTTGATACAATGCATTGTCTCTGTGAT 2402
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2424 ACAAGACAGGGAGAGTGGTCGAAACTCATTGAATTTGATACAATGCATTATCTCTGTGAT 2483
Query 2403 CCTGCTGATGCACAACGATGTCAAAGTTAGGAAGATAATATCATCATCCAAGTCAGAGAT 2462
||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||
Sbjct 2484 CCTGCTGATGCACAATGACGTCAAAGTTAGGAAGATAATATCATCATTCAAGTCAGAGAT 2543
Query 2463 TGATTTGATTCTGCAGAACGTTTA-CACATTGCAGTCCTCACGAAGCACGAGCTTGACTG 2521
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 2544 CGATTTGATTCTGCAGAACG-TTATCACATTGCAGTCCTCACGAAGCACGAGCTTGACTG 2602
Query 2522 TAGAAGGAAAGCATATGATGAAAATTGCAGCAGAGCGACTTAGCATTGCATCCAATAGCT 2581
|||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||
Sbjct 2603 TAGAAGGAAAGCATATGATGAAAATTGCGGGAGAGCGACTTAGGATTGCATCCAAAAGCT 2662
Query 2582 TACTCGCATAA 2592
||||||| |||
Sbjct 2663 TACTCGCGTAA 2673
Score = 833 bits (451), Expect = 0.0
Identities = 678/785 (86%), Gaps = 26/785 (3%)
Strand=Plus/Plus
Query 6 TCGCTCCAAGGCTCCTGCAAGGAAGCAGCAAAAGAAAGGAATCGATTTCAAGAAAATCAA 65
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct 6 TCGCTCCAAGGCTCCTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAAATTAA 65
Query 66 GAGAAAGCTCGGGAGAAAATTACCTCCACCAAATAATGCAACTAACACAGAGATTAAATC 125
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 66 GAGAAAGCTCGGGAGAAAATTACCTCCACCGAATAATGCAACTAACACTGAGATTAAATC 125
Query 126 CAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGAAA-GAGATGGCTTCGCTACAA 184
||||||||||||||||| ||||||||||||||| || |||| ||| ||||||||||||||
Sbjct 126 CAAAGCAATTATACTTCCTGAGCAAAGTGTGGCTGCTGAAAAGAG-TGGCTTCGCTACAA 184
Query 185 GTAAGAAAGGTTTGACCTTGCTTGAGCTTAAG-AACCGAACTGGGCATCCCAATGCTAAA 243
|||||||||| || |||||| |||||| | ||| |||| | |||| ||||||||||
Sbjct 185 GTAAGAAAGGCTTAACCTTGAAGGAGCTTCTGCAACA-AACTCGTCATCACAATGCTAAA 243
Query 244 GTTCGCAAAGATGCATTACATGGTATCAAAGATCTTTTAAA-ACATCATCCTGCAGAGCT 302
|||||||||||||||||| ||||||||||||| ||||| || | ||||||| | ||||||
Sbjct 244 GTTCGCAAAGATGCATTATATGGTATCAAAGACCTTTTTAAGA-ATCATCCAGAAGAGCT 302
Query 303 GCTGTCAAATAAATATGCTA-CTACACATAAACTTAGAGAACTCATTACTGATGATGATA 361
|| |||| |||||||||||| | | ||| ||||| || |||| ||||| |||||||||||
Sbjct 303 GCAGTCACATAAATATGCTATC-ATACAGAAACTCAGGGAACGCATTAGTGATGATGATA 361
Query 362 AGT-TAGTAAGAGACGATTTTTATACA-CTATTGA---CTGGGATCTTTCTTGCTTGTAA 416
| | |||| ||||| | ||||||| || ||||| | ||| ||||||| |||||||||
Sbjct 362 A-TCTAGTGAGAGATGCTTTTTAT-CAACTATTTAAAACTGACATCTTTCCTGCTTGTAA 419
Query 417 AGAGGATATTAACAAGGGTCTTATGGTTTCAAGTTTGATGCCATACATATTTACCGCTAT 476
|||||||| | || ||| | |||||| ||| |||||||||||||||||||| ||||||
Sbjct 420 AGAGGATA--ACCA-GGGCCCTATGGTGTCACTTTTGATGCCATACATATTTAGCGCTAT 476
Query 477 GACTAAGT-CA-TCTATTGAAGTTCGTTTGATGGCTTTCAAATTTTTCCGCCTTGTTTTG 534
| ||| || || | |||||| |||||||||||||||||||||||||||| ||||||| ||
Sbjct 477 GGCTA-GTTCAGT-TATTGATGTTCGTTTGATGGCTTTCAAATTTTTCCACCTTGTTGTG 534
Query 535 GAGTTTTACTCGCCTACCTTCTCCTTATATGCTGAAAAGATTCTCGAAAACTACAAGGAT 594
|||| ||| |||||||||| ||||| |||||||||||||||||||||||||||| |||
Sbjct 535 GAGTACTACCCGCCTACCTTTTCCTTGGATGCTGAAAAGATTCTCGAAAACTACAAAGAT 594
Query 595 GTTATTCATAATAACCATTTTTATATACAAGATAAAAAGAAGCTTAAGGTAGTTCTTT-T 653
|||| || || || ||||||||| | ||||||||||| ||||| ||||||| ||||| |
Sbjct 595 ATTATACAGAAAAATCATTTTTATGTGCAAGATAAAAACAAGCTAAAGGTAGCTCTTTCT 654
Query 654 GGGGTTGGCAGATTGCTTGTCGCTGTTGCCATGTGATCAGAGCGACAATGAATCA-AAGA 712
||| |||||| ||||| | |||||||||||||||||| | ||||||| |||||| || |
Sbjct 655 GGG-TTGGCACATTGCCTCTCGCTGTTGCCATGTGATGAAAGCGACACCGAATCACAA-A 712
Query 713 AAAAGGGACTTTTACAGTATGAAACGCTACTCGCCTGTGAGCAAGATGCTGCGAAAGAAT 772
||||||||| || |||| ||||||| |||||||||| ||||||||||||||| ||||| |
Sbjct 713 AAAAGGGACCTTCACAGAATGAAACACTACTCGCCTATGAGCAAGATGCTGCAAAAGATT 772
Query 773 GTGTT 777
|||||
Sbjct 773 GTGTT 777
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97739568670
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5