BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G27630.1 Length=2247 Score E Sequences producing significant alignments: (Bits) Value Ahg489567 jgi|Araly1|489567|fgenesh2_kg.6__2701__AT5G27630.1 3000 0.0 Ahg477830 jgi|Araly1|477830|fgenesh2_kg.3__531__AT3G05420.2 1495 0.0 Ahg900335 jgi|Araly1|900335|Al_scaffold_0004_985 220 3e-56 Ahg907815 jgi|Araly1|907815|Al_scaffold_0002_896 217 4e-55 > Ahg489567 jgi|Araly1|489567|fgenesh2_kg.6__2701__AT5G27630.1 Length=2177 Score = 3000 bits (1624), Expect = 0.0 Identities = 1952/2105 (93%), Gaps = 43/2105 (2%) Strand=Plus/Plus Query 11 AAATTAGTATTAATCCGAAAACTTGAAACTGTGGCTTCCTCCTCAAATCTCCGATCAACG 70 |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 2 AAATTAGTATTAATCCGAAAACTTGAAACTTTGGCTTCTTCCTCAAATCTCCGAT----- 56 Query 71 GAAACAAAATGGCTCACATGGTGAGAGCGAGCTCTGGCCTTTCTTACCCGGAGAGATTCT 130 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 57 ----CAAAATGGCTCACATGGTGAGAGCGAGCTCTGGCCTTGCTTACCCGGAGAGATTCT 112 Query 131 ACGCCGCCGCATCGTACGTCGGCCTCGACGGATCTCAATCGTCGGTCAAACAACTCAGCT 190 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 113 ACGCCGCCGCATCGTACGTTGGCCTCGACGGATCTCAATCGTCGGTGAAACAACTCAGCT 172 Query 191 CCAAATTCTCCAACGATACCTCTTTGCTTCTCTACACGTTGCACCAGCAGGCTACTCTAG 250 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 173 CCAAATTCTCCAACGATACCTCTTTGCTTCTCTACGCGTTGCACCAGCAGGCTACTCTAG 232 Query 251 GACCTTGTAGTATTCCAAAACCGAGTGCGTGGAATCCAGTAGAGCAAAGCAAATGGAAAA 310 ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 233 GACCTTGCAATATTCCAAAACCTAGTGCGTGGAATCCAGTAGAGCAAAGCAAATGGAAAA 292 Query 311 GTTGGCAGGGGCTTGGAACCATGCCCTCCATTGAGGCAATGCGTCTATTTGTGAAAATCT 370 |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct 293 GTTGGCAGGGGCTTGGAACCATGCTCTCCATTGAAGCAATGCGTCTCTTTGTGAAAATTT 352 Query 371 TGGAGGAAGCAGATCCTGGTTGGTATCCAAGGACATCTAACTCTGTTCTTGACCCTGCTG 430 | ||| ||| ||||||||| |||||||||||| |||||||||||||||| || ||||||| Sbjct 353 TAGAGAAAGAAGATCCTGGCTGGTATCCAAGGGCATCTAACTCTGTTCTAGAGCCTGCTG 412 Query 431 TACATGTCCAAATCAATAGCACAAAGGCTGAGCCTAGTTTTGAGAGTGGAGCTTCATTTG 490 || |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 413 TAGATGTCCAAGTCAGTAGCACAAAGGCCGAGCCTAGTTTTGAGAGTGGAGCTTCATTTG 472 Query 491 GTGAGACAAAGACGATTACTTCTGAGGATGGGCGCTTGACAGAAACGCAAGATAAAGATG 550 ||||||||||||||||| || | ||||||| ||||||||| | ||||||||||||||||| Sbjct 473 GTGAGACAAAGACGATTTCTACCGAGGATGAGCGCTTGACGGTAACGCAAGATAAAGATG 532 Query 551 TAGTTTTGGAAGACCCAGATACTGTTTCTGTGTATAATCAGTGGACTGCACCACGAACAT 610 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 533 TAGTTTTGGAAGACCCAAATACTGTTTCTGTGTATAATAAGTGGACTGCACCACGAACAC 592 Query 611 CAGGTCAGCCACCAAAAGCCCGATATCAGCATGGAGCAGCGGTTATTCAAGATAAGATGT 670 ||||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| Sbjct 593 CAGGTCAGCCACCAAAAGCTCGGTATGAGCATGGAGCAGCGGTTATTCAGGATAAGATGT 652 Query 671 ATATGTATGGTGGAAACCACAACGGCCGTTATCTAGGTGATCTTCATGTTCTGGATTTAA 730 |||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||| Sbjct 653 ATATGTATGGTGGAAACCACAATGGGCGTTATTTAGGTGATCTTCATGTTCTAGATTTAA 712 Query 731 AAAACTGGACTTGGTCAAGAGTTGAAACCAAGGTTGTGACTGGATCACAGGAAACATCAT 790 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 713 AAAACTGGACTTGGTCAAGAGTTGAAACCAAGGTTGTAACTGAATCACAGGAAACTTCAT 772 Query 791 CTCCAGCAAAACTAACTCACTGTGCTGGTCATTCTTTGATACCATGGGATAA-CCAGCTT 849 ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| Sbjct 773 CTCCAGCAAAACTAACTCACTGTGCTGGTCATTCTTTGATACCATGGGA-AAGCAAGCTT 831 Query 850 TTGTCTATCGGTGGTCATACAAAAGATCCTTCAGAATCCATGCCAGTGATGGTCTTTGAT 909 |||||| | |||||||||||||| ||||| ||||||| |||| ||||| || |||||| Sbjct 832 TTGTCTGTAGGTGGTCATACAAAGGATCCCTCAGAATACATGATAGTGAAGGAATTTGAT 891 Query 910 CTACATTGCTGTTCATGGTCAATCTTAAAGACATACGGGAAGCCACCGATTTCGCGTGGA 969 || | | |||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 892 CTGCGTAGCTGTTCATGGTCAATCTTAAAGACACACGGGAAGCCACCGATTTCCCGTGGA 951 Query 970 GGTCAGTCAGTGACCCTTGTGGGAAAAAGCTTGGTGATATTTGGTGGCCAGGATGCAAAG 1029 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 952 GGTCAGTCAGCGACCCTTGTGGGAAAAAGCTTGGTGATATTTGGTGGCCAGGATGGAAAG 1011 Query 1030 AGATCGCTTCTGAACGATTTGCATATACTTGATTTAGATACCATGACCTGGGAGGAAATT 1089 | |||||| || |||||||||||||||||| || ||||||||||||||||||| || || Sbjct 1012 AAATCGCTCCTAAACGATTTGCATATACTTCATCTAGATACCATGACCTGGGATGAGATG 1071 Query 1090 GATGCCGTGGGTTCTCCTCCAACTCCAAGGTCTGATCATGCTGCTGCAGTGCACGCTGAG 1149 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1072 GATGTCGTGGGTTCTCCTCCAACTCCAAGGTCTGATCATGCTGCTGCAGTGCACGCTGAG 1131 Query 1150 CGTTACCTTCTAATCTTTGGTGGAGGATCACATGCAACTTGTTTTGATGATCTGCACGTC 1209 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 1132 CGTTACCTTCTAATCTTTGGTGGAGGATCACATACAACTTGTTTTGATGATCTGCATGTC 1191 Query 1210 CTTGATCTGCAAACTATGGAATGGTCAAGACATACACAACAAGGTGACGCACCAACTCCA 1269 || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1192 CTCGATCTGCAAACTATGGAGTGGTCAAGACATACACAACAAGGTGAAGCACCAACTCCA 1251 Query 1270 CGTGCTGGACACGCTGGTGTGACGATTGGGGAAAATTGGTATATTGTTGGTGGTGGAGAT 1329 |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 1252 CGTGCTGGACACGCCGGTGTGACAATTGGTGAAAATTGGTATATTGTTGGTGGTGGAGAT 1311 Query 1330 AACAAAAGCGGGGCATCTAAGACTGTTGTATTAAATATGTCAACTCTTGCATGGTCAGTT 1389 ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1312 AACAAAACCGGGGCATCTAAGACTGTTGTATTAAATATGTCAACTCTTGCGTGGTCAGTA 1371 Query 1390 GTCACTTCAGTCCAAGAACATGTACCTCTCGCTAGTGAGGGATTGAGTTTAGTTGTGAGC 1449 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1372 GTCACTTCAGTCCAAGGACATGTACCTCTCGCTAGTGAGGGATTGAGTTTAGTTGTGAGC 1431 Query 1450 TCATACAATGGAGAAGACATAGTGGTTGCTTTTGGTGGATACAACGGACATTACAACAAT 1509 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1432 TCATACAATGGCGAAGACATAGTTGTTGCTTTTGGTGGATACAACGGACATTACAACAAC 1491 Query 1510 GAAGTGAATGTTCTTAAACCAAGCCACAAATCAAGCTTGAAATCCAAGATTATGGGAGCT 1569 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1492 AAAGTGAATGTTCTTAAACCAAGCCACAAATCAAGCTTGAAATCCAAGATTATGGGAGCT 1551 Query 1570 TCTGCTGTGCCAGATAGTTTTTCCGCTGTTAATAACGCCACGACTAGAGATATTGAGTCT 1629 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 1552 TCTGCTGTGCCAGATAGTTTTTCCGCTGTTAATAATGCCACGACTAGAGATATTGAGTTT 1611 Query 1630 GAGATCAAGGTTGAAGGAAAAGCCGACCGCATTATCACAACCCTTAAATCCGAAAAAGAA 1689 |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 1612 GAGATCGAGGTTGAAGGAAAAGCCGAACGCATTATCACAACCCTTGAATCCGAAAAAGAA 1671 Query 1690 GAAGTGGAGGCATCACTCAACAAGGAAAAGATACAAACTCTCCAACTAAAGGAAGAGTTA 1749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1672 GAAGTGGAGGCATCACTCAACAAGGAAAAGATACAAACTCTCCAACTAAAGGAAGAGTTA 1731 Query 1750 GCAGAGATAGACACACGAAATACAGAGTTATACAAGGAACTTCAATCTGTGCGGAACCAA 1809 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 1732 GCAGAGATTGACACACGAAATACAGAGTTGTACAAGGAACTTCAATCTGTGCGGAATCAA 1791 Query 1810 CTTGCAGCGGAACAATCAAGGTGTTTCAAACTAGA-GGT------T-----------G-- 1849 ||||||| |||||||||||||||||| || || || ||| | | Sbjct 1792 CTTGCAGTGGAACAATCAAGGTGTTTGAATCTCGATGGTGAAACATTCCTCTCCAATGTT 1851 Query 1850 -AAGTTGCAGAGCTAAGACAAAAGCTTCAGACAATGGAAACACTTCAAAAGGAACTCGAA 1908 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1852 GAAGTTGCAGAACTAAGACAAAAGCTTCAGACAATGGAAACACTTCAAAAGGAACTTGAA 1911 Query 1909 CTCCTCCAACGTCAAAGAGCCGTTGCGTCTGAACAAGCCGCCACCATGAACGCCAAACGA 1968 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1912 CTCCTCCAACGTCAAAGAGCCGTTGCGTCTGAACAAGTAGCCACCATGAACGCCAAACGA 1971 Query 1969 CAAAGCTCTGGTGGCGTCTGGGGTTGGCTCGCTGGAACTCCTCCGCCTAAAACATGAGTG 2028 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1972 GAGAGCTCTGGTGGCGTCTGGGGTTGGCTCGCTGGAACTCCTCCGCCTAAAACATGA-TC 2030 Query 2029 CCC----ATGAAACtttttt-t--CGGGTAACTCTTTTTT---GTCATTACCAATATCAG 2078 ||| |||||| |||||| | | | || ||||||||| ||||||||||||||||| Sbjct 2031 CCCCCCCATGAAATTTTTTTGTTTCCGATACCTCTTTTTTTTTGTCATTACCAATATCAG 2090 Query 2079 TATTT 2083 ||||| Sbjct 2091 TATTT 2095 > Ahg477830 jgi|Araly1|477830|fgenesh2_kg.3__531__AT3G05420.2 Length=2322 Score = 1495 bits (809), Expect = 0.0 Identities = 1306/1543 (85%), Gaps = 46/1543 (3%) Strand=Plus/Plus Query 113 CTTACCCGGAGAGATTCTACGCCGCCGCATCGTACGTCGGCCTCGACGGATCTCAATCGT 172 ||||||||||||| ||||||||||||||||| |||||||| |||||||||||| | |||| Sbjct 131 CTTACCCGGAGAGGTTCTACGCCGCCGCATCTTACGTCGGTCTCGACGGATCTGATTCGT 190 Query 173 CGGTC-AAACAAC-TCAGCTCCAAATTCTCCAACGATACCT-CTTTGCTTCTCTACACGT 229 ||| | ||| ||| ||| ||| ||||||||| | |||| || | | |||||||| || Sbjct 191 CGG-CGAAA-AACGTCATCTCGAAATTCTCCGATGATA-CTGCACTACTTCTCTATGCGC 247 Query 230 TGCACCAGCAGGCTACTCTAGGACCTTGTAGTATTCCAAAACCGAGTGCGTGGA-ATCCA 288 || |||| ||||||||| ||||||| || | | ||| ||||| ||||| |||| | ||| Sbjct 248 TGTACCATCAGGCTACTGTAGGACCATGCAACACTCCGAAACCTAGTGCATGGAGA-CCA 306 Query 289 GTAGAGCAAAGCAAATGGAAAAGTTGGCAGGGGCTTGGAACCATGCCCTCCATTGAGGCA 348 || |||||||||||||||| |||||||||||| || |||||||||||||||||||||||| Sbjct 307 GTGGAGCAAAGCAAATGGAGAAGTTGGCAGGGACTCGGAACCATGCCCTCCATTGAGGCA 366 Query 349 ATGCGTCTATTTGTGAAAAT-CTTGGAGGAAGCA-GATCCTGGTTGGTATCCAAGGACAT 406 |||||||| ||||||||||| || |||||||| | ||||| ||||||||| ||||| ||| Sbjct 367 ATGCGTCTCTTTGTGAAAATTCT-GGAGGAAG-ATGATCCGGGTTGGTATTCAAGGGCAT 424 Query 407 CTAACTC-TGTTCTTGACCCTG-CTGTACATGTCCAAATCAAT-AGC-A-C-AAAGGCTG 460 |||| | | ||| || |||| | ||| |||||||||| ||| || | | |||| || Sbjct 425 CTAA-TGATATTCCAGATCCTGTC-GTAGATGTCCAAATTAATCAGAGAACGAAAGA-TG 481 Query 461 AGCCTAGTT-TTGAGAGTGG-AGCTTCATTTGGTGAGACAAAGACGATTACTTCTGAGGA 518 ||||| ||| |||||| ||| | || ||||||||||||||||||| ||| || ||||| | Sbjct 482 AGCCT-GTTGTTGAGAATGGGAACT-CATTTGGTGAGACAAAGACAATTTCTACTGAGAA 539 Query 519 TGGGCGCTTGACAGAAACGCAAGATAAAGATGTAGTTTTGGAAGACCCAGATACTGTTTC 578 ||| || ||| | ||||| || |||||||||||||| | |||||| || |||||||||| Sbjct 540 TGGACGTTTGGCTGAAACCCAGGATAAAGATGTAGTCTCAGAAGACTCAAATACTGTTTC 599 Query 579 TGTGTATAATCAGTGGACTGCACCACGAACATCAGGTCAGCCA-CCAAAAGCCCGATATC 637 ||| ||||| |||||||||||||| | |||||||||||||| | ||||||||||| || | Sbjct 600 TGTATATAACCAGTGGACTGCACCCCAAACATCAGGTCAGC-AGCCAAAAGCCCGTTA-C 657 Query 638 -AGCATGGAGCAGCGGTTATTCAAGATAAGATGTATATGTATGGTGGAAACCACAACGGC 696 ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct 658 GAGCATGGAGCAGCAGTTATTCAAGATAAGATGTATATATATGGTGGAAATCACAATGGC 717 Query 697 CGTTATCTAGGTGATCTTCATGTTCTGGATTTAAAAAACTGGACTTGGTCAAGAGTTGAA 756 ||||| || ||||||||||||||||| ||||||||||| |||| |||||||||||||||| Sbjct 718 CGTTACCTTGGTGATCTTCATGTTCTAGATTTAAAAAATTGGAGTTGGTCAAGAGTTGAA 777 Query 757 ACCAAGGTTGTGACTGGAT-CACAGGAAACATCATCTCCAGCAAAACTAACTCACT-GTG 814 |||||||||| |||| || |||||||||||||| ||||| || | || ||| || ||| Sbjct 778 ACCAAGGTTGCAACTG-ATGCACAGGAAACATCAACTCCAACATTATTAGCTC-CTTGTG 835 Query 815 CTGGTCATTCTTTGATACCATGGGATAACCAGCTT-TTGTCTATCGGTGGTCATACAAAA 873 ||||||||||||||||| ||||||| ||| |||| || |||||||||||||||||||| Sbjct 836 CTGGTCATTCTTTGATAGCATGGGACAACAAGCTGCTT-TCTATCGGTGGTCATACAAAG 894 Query 874 GATCCTTCAGAATCCATGCCAGTGATGGTCTTTGATCTACATTGCTGTTCATGGTCAATC 933 ||||| |||||||| |||| ||||| ||||||||||| ||| | || |||||||||| Sbjct 895 GATCCCTCAGAATCTATGCAAGTGAAGGTCTTTGATCCCCATACCAGTACATGGTCAATG 954 Query 934 TTAAAGACATACGGGAAGCCACCGATTTCGCGTGGAGGTCAGTCAGTGACCCTTGTGGGA 993 ||||||||||| || || |||||| |||| |||||||| |||||||| || | ||||| Sbjct 955 TTAAAGACATATGGAAAACCACCGGTTTCACGTGGAGGCCAGTCAGTTACAATGGTGGGT 1014 Query 994 AAAAGCTTGGTGATATTTGGTGGCCAGGATGCAAAGAGATCGCTTCTGAACGATTTGCAT 1053 |||| ||||||||||||||| || || |||||||||||||| |||||||||||||||||| Sbjct 1015 AAAACCTTGGTGATATTTGGCGGGCAAGATGCAAAGAGATCACTTCTGAACGATTTGCAT 1074 Query 1054 ATACTTGATTTAGATACCATGACCTGGGAGGAAATTGATGCCGTGGGT-TCTCCTCCAAC 1112 ||||||||| |||| || ||||||||||| || || |||||||||||| | || |||| | Sbjct 1075 ATACTTGATCTAGACACGATGACCTGGGATGAGATAGATGCCGTGGGTGTATC-TCCATC 1133 Query 1113 TCCAAGGTCTGATCATGCTGCTGCAGTGCACGCTGAGCGTTACCTTCTAATCTTTGGTGG 1172 ||| |||||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct 1134 TCCGAGGTCTGATCATGCTGCTGCAGTGCATGCAGAACGTTACCTTCTTATCTTTGGTGG 1193 Query 1173 AGGATCACATGCAACTTGTTTTGATGATCTGCACGTCCTTGATCTGCAAACTATGGAATG 1232 |||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||| || Sbjct 1194 GGGATCACATGCAACCTGTTTCGATGACCTGCATGTCCTTGATTTGCAGACTATGGAGTG 1253 Query 1233 GTCAAGAC-ATACACAACAAGGTGACGCACCAACTCCACGTGCTGGACACGCTGGTGTGA 1291 |||||||| | ||||||||||||| |||||||||||| | |||||||| ||||| |||| Sbjct 1254 GTCAAGACCAG-CACAACAAGGTGATGCACCAACTCCAAGAGCTGGACATGCTGGCGTGA 1312 Query 1292 CGATTGGGGAAAATTGGTATATTGTTGGTGGTGGAGATAACAAAAGCGGGGCATCTAAGA 1351 | |||||||| || |||| |||||||||||| || |||||||| || |||||||| ||| Sbjct 1313 CAATTGGGGAGAACTGGTTTATTGTTGGTGGCGGTGATAACAAGAGTGGGGCATCGGAGA 1372 Query 1352 CTGTTGTATTAAATATGTCAACTCTTGCATGGTCAGTTGTCACTTCAGTCCAAGAACATG 1411 ||||||| |||| |||||||||||| ||||||| || || ||||||| |||| || || Sbjct 1373 GTGTTGTACTAAACATGTCAACTCTTTCATGGTCGGTAGTTGCTTCAGTTCAAGGACGTG 1432 Query 1412 TACCTCTCGCTAGTGAGGGATTGAGTTTAGTTGTGAGCTCATACAATGGAGAAGACATAG 1471 ||||||| ||||| |||||||| |||||||| ||||| ||||||||||| ||||| || Sbjct 1433 TACCTCTTGCTAGCGAGGGATTAAGTTTAGTGGTGAGTTCATACAATGGTGAAGATGTAC 1492 Query 1472 TGGTTGCTTTTGGTGGATACAACGGACATTACAACAATGAAGTGAATGTTCTTAAACCAA 1531 | || ||||||||||||||||| |||| ||||||||| ||| | ||| |||||||||||| Sbjct 1493 TAGTCGCTTTTGGTGGATACAATGGACGTTACAACAACGAAATTAATCTTCTTAAACCAA 1552 Query 1532 GCCACAAATCAAGC-TTG-AAATCCAAGATTATGGGAGCTTCTGCTGTGCCAGATAGTTT 1589 |||||||||||| | ||| ||| | |||| | ||| ||| || | |||||| |||| | Sbjct 1553 GCCACAAATCAA-CATTGCAAA-CAAAGACTCTGGAAGCGCCT--T-TGCCAGGTAGTCT 1607 Query 1590 TTCCGCTGTTAATAACGCCACGACTAGAGATATTGAGTCTGAG 1632 ||| ||||||||||||||||| || ||||| |||||||||||| Sbjct 1608 TTCTGCTGTTAATAACGCCACAACCAGAGACATTGAGTCTGAG 1650 > Ahg900335 jgi|Araly1|900335|Al_scaffold_0004_985 Length=240 Score = 220 bits (119), Expect = 3e-56 Identities = 138/147 (94%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 1639 GTTGAAGGAAAAGCCGACCGCATTATCACAACCCTTAAATCCGAAAAAGAAGAAGTGGAG 1698 ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| Sbjct 1 GTTCAAGGAAAAGCCGAACGCATTATCACAACCCTTAAATTCGAAAAAGAAGAA--GGAG 58 Query 1699 GCATCACTCAACAAGGAAAAGATACAAACTCTCCAACTAAAGGAAGAGTTAGCAGAGATA 1758 |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 59 ACATCACTCAACAAGGAAAAGATACTAACTCTTCAACTAAAGGAAGAGTTAGCAGAGATA 118 Query 1759 GACACACGAAATACAGAGTTATACAAG 1785 |||||||||||||||||||| |||||| Sbjct 119 GACACACGAAATACAGAGTTGTACAAG 145 > Ahg907815 jgi|Araly1|907815|Al_scaffold_0002_896 Length=492 Score = 217 bits (117), Expect = 4e-55 Identities = 140/151 (93%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 1635 CAAGGTTGAAGGAAAAGCCGACCGCATTATCACAACCCTTAAATCCGAAAAAGAAGAAGT 1694 ||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 246 CAAAGTTCAAGGAAAAGCCGAACGCATTATCACAACCCTTAAATTCGAAAAAGAAGAA-- 303 Query 1695 GGAGGCATCACTCAACAAGGAAAAGATACAAACTCTCCAACTAAAGGAAGAGTTAGCAGA 1754 |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 304 GGAGACATCACTCAACAAGGAAAAGATACTAACTCTTCAACTAAAGGAAGAGTTAGCAGA 363 Query 1755 GATAGACACACGAAATACAGAGTTATACAAG 1785 |||||| ||||||||||||||||| |||||| Sbjct 364 GATAGAGACACGAAATACAGAGTTGTACAAG 394 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84598434145 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5