BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G27750.1
Length=1652
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489554 jgi|Araly1|489554|fgenesh2_kg.6__2688__AT5G27750.1 1962 0.0
Ahg471537 jgi|Araly1|471537|fgenesh2_kg.1__1491__AT1G13780.1 1000 0.0
Ahg906917 jgi|Araly1|906917|Al_scaffold_0003_4045 676 0.0
> Ahg489554 jgi|Araly1|489554|fgenesh2_kg.6__2688__AT5G27750.1
Length=1548
Score = 1962 bits (1062), Expect = 0.0
Identities = 1372/1517 (90%), Gaps = 40/1517 (3%)
Strand=Plus/Plus
Query 14 TTTACCACTTAGCCTCTGACGCCAGAACTCCGGTCGATAATTCGCCGGAGAATCAAATCC 73
|||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 2 TTTATCACTTAGCCTCTGAAGCCAGAACTCCGGTCGATAATTCGCCGGAGAATCTAATCC 61
Query 74 ACGGGTTTTGTGTCTCGTGATGCCTGGGTTCGATAGAATTAGCGAATTACCGGAATCTCT 133
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
Sbjct 62 ACGGGTTTTGTGTCTCGTGATGCCTGGGTTTGATAGAATCAGCGAATTACCGGAATCTTT 121
Query 134 GATTACTCAAATACTCTTATGCCTTCCGACTAAAGATTCGGTGAAGACGAGTGTTTTATC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 GATTACTCAAATACTCTTATGCCTTCCGACTAAAGATTCGGTGAAGACGAGTGTTTTATC 181
Query 194 GACTAGGTGGAAGAATCTATGGCTAAATGTTCCCGGACTTGACTT-AACTTGCAGTGATT 252
||||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct 182 TACTAGATGGAAGAATCTATGGCTAAATGTTCCCGGACTTGACTTGAAC-TGCCGTGATT 240
Query 253 TCCCTTTTGAAGATGAAGAATATGAACAAGTGTTCATTAACTTCATCGACAGGTTTCTAG 312
| ||| | ||||||||||||||||| ||||||| ||||||||||||||||||||| |||
Sbjct 241 TACCTGATCAAGATGAAGAATATGAAGAAGTGTTTATTAACTTCATCGACAGGTTTTTAG 300
Query 313 AGTTTAATCCTGAGTCACGCCTGCAAACATTCGAGGTAGATTACAAAAGGCGTGAGATAC 372
||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||
Sbjct 301 AGTTTAATCCTGAGTCACGCCTGCAAAAATTCAAGGTAGATTACAGTAGGCGTGAGATAC 360
Query 373 GCGGGTTCAAGGATCGGATCGGTACAGCGATTAACCGCGGAATTCGACTTCTAGATGCTG 432
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 361 TTGGGTTCAAGGATCGGATCGGTACAGTGATTAACCGCGGAATTCGACTTCTTGATGCTG 420
Query 433 TGAGTAGTACCATG--TATTGGGAGGAGGAATGCATTATGTATCCTTATTTGGAGTTCAT 490
||||||||| | || ||| | ||||| || || |||||||||||||||| ||||||||
Sbjct 421 TGAGTAGTA-C-TGAATATCGAGAGGATGACGGCTTTATGTATCCTTATTTCGAGTTCAT 478
Query 491 GCCTCTGAATCTCTTTACAAGCAAGACGTTGGTTACTTTAAAGCTC-CGGGATTCGGCTC 549
|||||||||||| ||||| |||||||| |||||| ||||||||||| || | ||||| ||
Sbjct 479 GCCTCTGAATCTGTTTACGAGCAAGACATTGGTTTCTTTAAAGCTCTCGTG-TTCGGGTC 537
Query 550 TTAACGATCCGGG-TTTGCTTTCTATGCCTTGTCTT-AAGTTCATGATTCTTC-GTGAAG 606
||| |||||||| |||| ||||||||||||||||| ||| ||||| |||||| | |||
Sbjct 538 TTAGGGATCCGGGTTTTG-TTTCTATGCCTTGTCTTAAAG-TCATGTTTCTTCAG-GAAA 594
Query 607 TTCGATGGTCTGGTACCATG-AGTCTTGAGAAGCTTGTCTCTGGATGTCCTGTTCTTGAA 665
|||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||
Sbjct 595 TTCGATGGTCTGGTACTATGCA-TCTTGAAAAGCTTGTCTCTGGATGTCCTGTTCTTGAA 653
Query 666 GACCTGACCTTGGTAAGG-ACCTTGAT-ATGTCAT-ATTGATGACGATGAATTGCCGGTT 722
|| ||||||||||||||| | |||||| | | || | | || | || ||| || ||
Sbjct 654 GAACTGACCTTGGTAAGGTATCTTGATGA-G-GATGAAT--TG--G-TG-GTTG-CGCTT 704
Query 723 ACTCGTGTGAGATCTCGGAGTCTGAAGACGTTTTATGTTCCGCTCGCGTATGG-AGTAGG 781
||||||||||||||| ||||||||||||||||||||||||||||| | ||||| |||
Sbjct 705 ACTCGTGTGAGATCTTGGAGTCTGAAGACGTTTTATGTTCCGCTCACATATGGAAGT-TT 763
Query 782 TTGTAGGTCAAGAGTCCCAGACAAAGTACTTGAGATTGATGCTCCAGGACTAGAGAATAT 841
|||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||
Sbjct 764 TTGTAGATCAAGAGTCCTAGACACAGTACTTGAGATTGATGCTCCAGGACTAGAGTCTAT 823
Query 842 GACTCTCAAAGAAGACCATTTCGATG-GAATCGTGGTAAAGAACCTGACTTCTTTGTTCA 900
|||||||||||||||||||||||| | |||| | |||||||||||||||||||||||||
Sbjct 824 GACTCTCAAAGAAGACCATTTCGA-GAAAATCATAGTAAAGAACCTGACTTCTTTGTTCA 882
Query 901 TGATTGAACTTAATATCAAGTTTGCTGTCGATTACCG-CAGGAGTTTTGATCCAGAGGAC 959
||||||| ||| |||||||||||| |||| | || | ||| ||||||||||||||||||
Sbjct 883 TGATTGACCTTGATATCAAGTTTGTTGTCAAGTA-TGACAGTAGTTTTGATCCAGAGGAC 941
Query 960 TTATCGAAGAGAAATGAAATTGGTGATTTTCTCACTGGGATATCTCGTGCAAGACATATG 1019
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 942 TTATCGAAGACAAATGAAATCCTTGATTTTCTCACTGGGATATCTCGTGCAAGACATATG 1001
Query 1020 ATCATCTCTCAGAAAACAGTGAAGGCTCTTGAAAGTTACTCAAAAGTTGGATCGATTCCC 1079
||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct 1002 ATCATCTCTAAGAAAACAGTGAAGGCCCTTGATAGTTACTCAAAAGTAGGATCGATTCCC 1061
Query 1080 AAATTCAATAACTTGTCACATTTAAAAGCTGTGTTCCCGAGCCCCTTGTTACCGTTCTTG 1139
|||||||||||||| || | |||| | ||||||||||||||||||||||||||||| |||
Sbjct 1062 AAATTCAATAACTTATCCCGTTTACAGGCTGTGTTCCCGAGCCCCTTGTTACCGTTTTTG 1121
Query 1140 CCAGCCTTTCTTGAGAGTTTCCCGAATCTGAAAAACCTAATCTTGAAGATTGCTTTTGCA 1199
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1122 CCAGCCTTTCTTGAGAGTTTCCCGAATCTGAAAATCCTAATCCTGAAGATTGCTTTTGCA 1181
Query 1200 AAGGATGATGAGACGGAGGAGCTGAATCTCATAAACGTGCCTCGGTGTATCGTATCGACT 1259
|||||||| ||||||||||||||||||||| |||| |||||||||||| || ||||||||
Sbjct 1182 AAGGATGACGAGACGGAGGAGCTGAATCTCGTAAATGTGCCTCGGTGTTTCATATCGACT 1241
Query 1260 CTCGAGTGTGTTGAGATAAAAGGATTGTTTGAATGGGAGGAAGAGGAGATGAAAATAGCG 1319
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 CTCGAATGTGTTGAGATAAAAGGATTGTTTGAATGGGAGGAAGAGGAGATGAAAATAGCG 1301
Query 1320 AGGTACTTTCTTGAAAACGCAGCAGTCCTCAAGAAACTTACTATGAGTTTTATAGACTAC 1379
| |||||||||||||||| ||||||||||||||||||| ||| || |||| |||||||||
Sbjct 1302 AAGTACTTTCTTGAAAACTCAGCAGTCCTCAAGAAACTCACTCTGTGTTTCATAGACTAC 1361
Query 1380 CCTCGATATGCTTCAAATTCAGATGTCTACGAGGACCTTGATAAACTCACAAAACGTTCT 1439
||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 1362 CCTCGATATGCATCAAATTCAGATGTCTACGAGGAGCTTAATAAACTCACAAAACGTTCT 1421
Query 1440 C-AACAATGTCGAATTATCGTTGATGATGAGTGATGAAGATTGATCCGCAACCATGAATA 1498
| || | ||||||||||||||||||||||| ||||||| | ||||||||||||||||| |
Sbjct 1422 CGAAGA-TGTCGAATTATCGTTGATGATGACTGATGAATACTGATCCGCAACCATGAAGA 1480
Query 1499 A-G---CCCATGAGCAT 1511
| | |||||||||||
Sbjct 1481 AAGAAGCCCATGAGCAT 1497
> Ahg471537 jgi|Araly1|471537|fgenesh2_kg.1__1491__AT1G13780.1
Length=1413
Score = 1000 bits (541), Expect = 0.0
Identities = 1132/1404 (81%), Gaps = 93/1404 (7%)
Strand=Plus/Plus
Query 90 GTGATGCCTGGGTTCGATAGAATTAGCGAATTACCGGAATCTCTGATTACTCAAATACTC 149
|||||||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||
Sbjct 1 GTGATGCCTGGGTTCGATAGAATTAGCGAATTGCCGGAATCTTTGATTAGTCATATACTC 60
Query 150 TTATGCCTTCCGACTAAAGATTCGGTGAAGACGAGTGTTTTATCGACTAGGTGGAAGAAT 209
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 TTACACCTTCCGACTAAAGATTCGGTGAAGACGAGTGTTTTATCGACTAGATGGAAGAAT 120
Query 210 CTATGGCTAAATGTTCCCGGACTTGACTT-AACTTGCAGTGATTTCCCTTTTGAAGATGA 268
|||||||| |||||||||||||||||||| ||| ||| |||||||||||||| ||| |
Sbjct 121 CTATGGCTTAATGTTCCCGGACTTGACTTGAAC-TGCCGTGATTTCCCTTTT---GAT-A 175
Query 269 AGAA-TATGAACAAGTGTTCATTAACTTCATCGACAGGTTTCTAGAGTTTAATC-CTGAG 326
| || | ||| ||||||| ||| | ||||||||||| ||||| ||||||| | ||||
Sbjct 176 ACAACAACGAAAAAGTGTTGATTGATTTCATCGACAGATTTCTCCAGTTTAA-CAATGAG 234
Query 327 TCACGCCTGC-AAACATTCGAGGTAGATTACAAAAGGCG-TGAGATAC-GCGGGTTCAAG 383
|| ||||||| ||| |||| ||||| |||||| | | | |||||| | | |||| |
Sbjct 235 TCTCGCCTGCTAAA-ATTCAAGGTAAATTACAGTA-GAGATGAGAT-CATCAAGTTCTCG 291
Query 384 GATCGGATCGGTACA-GCGATTAACCGCGGAATTCGACTTCTAGATGCTGTGAGTAGTAC 442
||||||||| || | ||| |||||||| |||||||| || |||||| || ||| | |||
Sbjct 292 GATCGGATCCGT-GATGCGGTTAACCGCCGAATTCGAGTTTTAGATGTTGAGAGCAATAC 350
Query 443 C-ATGTATTGGGA-G--GAGGAATGCATTATGTATCCTTATTTGGAGTTCATGCCTCTGA 498
| || ||| || | || || || || | ||||||| | | ||||||||||||||||
Sbjct 351 CTAT-TATCAAGATGCTGATGACGGCCTTGTCTATCCTTGTATCGAGTTCATGCCTCTGA 409
Query 499 ATCTCTT-TACAAGCAAGACGTTGGTTACTTTAAAGC-TCCGGGATTCGGCTCTTAAC-G 555
|||| || ||| || ||||| |||||| |||| |||| | | | ||||| |||| | |
Sbjct 410 ATCT-TTATACGAGTAAGACATTGGTTTCTTTGAAGCTTTC-GTTTTCGGGTCTT-GCGG 466
Query 556 ATCCGGG-TTTGCTTT-CTATGCCTTGTCTTAAGTTCATG-ATTCTTCGTGAAGTTC--- 609
||||||| |||| ||| | ||||||||||| || |||||| | |||||| |||||||
Sbjct 467 ATCCGGGATTTG-TTTAC-ATGCCTTGTCTCAAATTCATGCA-TCTTCGAGAAGTTCGTT 523
Query 610 -G-ATGGT-CTGGTACCATGAGTCTTGAGAAGCTTGTCTCTGGATGTCCTGTTCTTGAAG 666
| || || |||||| |||| ||| || ||||||||||| |||||||||||||||||||
Sbjct 524 GGCATAGTAGTGGTACTATGAATCTGGACAAGCTTGTCTCAGGATGTCCTGTTCTTGAAG 583
Query 667 ACCTGACCTTGGTAAGGACCTTGATATGTCATATTGATGACGATGAATTGCCGGTTACTC 726
| | | | || || || || | ||| ||| ||||||||| ||||||||
Sbjct 584 A----A-C----T---GA--TT--TA--TC-T-TTG-TGATGATGAATTGGTGGTTACTC 622
Query 727 GTGTGAGATCTCGGAGTC-TGAAGACGTTTTATGTTCCGCTC-GCGTATGGAGTAGGTTG 784
||||||||||||| || | |||||| ||||| | ||||| || | | | |||| ||
Sbjct 623 GTGTGAGATCTCGAAG-CTTGAAGAGGTTTTCTATTCCG-TCTGAGCA--CAGTA-TTTC 677
Query 785 TAG--GTC-AAGAGT--CCCAGACAAAGTACTTGAGATTGATGCTCCAGGACTAGAGAAT 839
| | || ||||| | ||||| | | |||||||||||||||||||||||||| ||
Sbjct 678 TTGTTTTCGGAGAGTGGCACAGAC--A-T--TTGAGATTGATGCTCCAGGACTAGAGTAT 732
Query 840 ATGACTCTCAAAGAAGACCATTTCGATGGAATCGTGGTAAAGAACCTGACTTCTTTGTTC 899
|||| ||| |||||||||||||||||| || ||||||| ||||||||||||||||| |||
Sbjct 733 ATGAGTCTTAAAGAAGACCATTTCGATAGATTCGTGGTGAAGAACCTGACTTCTTTATTC 792
Query 900 ATGATTGAACTTAATATCAAGTTTGCTGTC-GATTACCGCAGGAGT-TTTGATCCAGAGG 957
|||||||| || ||||||| || | || | || || ||| | |||||||| ||||
Sbjct 793 ATGATTGACCTCGATATCAAATTCATTTTCGGGTT-TGGCCGGA-TGTTTGATCCGGAGG 850
Query 958 ACTTATCGAAGAGAAATGAAATTGGTGATTTTCTCACTGGGATATCTCGTGCAAGACATA 1017
|||| | || ||||||||||| ||||||||||||| ||||||||| || ||||||||
Sbjct 851 ACTTGGCAAATAGAAATGAAATCCGTGATTTTCTCACCGGGATATCTATTGTAAGACATA 910
Query 1018 TGATCATCTCTCAGAAAACAGTGAAGGCTCTTGAAAGTTACTCAAAAGTTGGATCGATTC 1077
||||||||||||| ||||||||||||| ||| | | ||||||| |||| ||| ||||||
Sbjct 911 TGATCATCTCTCATCAAACAGTGAAGGCCCTTCATATTTACTCAGAAGTAGGACCGATTC 970
Query 1078 CCAAATTCAATAACTTGTCACAT-TTAAAAGCTGTGTTCCCGAGCCCCTTGTTACCGTTC 1136
|||||||||||||| | || | | || | |||| |||||||||| ||||||||| |||
Sbjct 971 CCAAATTCAATAACGTATCCCGTCTT-CAGGCTGAGTTCCCGAGCTCCTTGTTACAGTTT 1029
Query 1137 TTGCCAGCCTTTCTTGAGAGTTTCCCGAATCTGAAAAACCTAATCTTGAAGATTGCTTT- 1195
|||||||||||||||||||||||||||||||||||| || |||||||||| |||| |||
Sbjct 1030 TTGCCAGCCTTTCTTGAGAGTTTCCCGAATCTGAAACACTTAATCTTGAAAATTG-TTTA 1088
Query 1196 TGCAAAGGATGATGAGACGGAGGAGCTGAATCTCATAAACGTGCCTCGGTGTATCGTATC 1255
| || |||| | ||| ||||||| | || ||| |||| |||||||| ||| |||||||
Sbjct 1089 TCCAGAGGAGG-TGAT--GGAGGAGTTAAAACTCGTAAATGTGCCTCGATGTTTCGTATC 1145
Query 1256 GACTCTCGAGTGTGTTGAGATAAAAGGATTGTTTGAATGGGAGGAAGAGGAGATGAAAAT 1315
|||||| ||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct 1146 GACTCTTGAGCGTGTTGAGATAAAAGGATTGTTTGACTGGGGGGAAGAGGATATGAAAAT 1205
Query 1316 AGCGAGGTACTTTCTTGAAAACGCAGCAGTCCTCAAGAAACTTACTATGAGTTTTATAGA 1375
|||||| ||||||||||||||| ||||||||||| ||||||| | | || |||| || |
Sbjct 1206 AGCGAGTTACTTTCTTGAAAACTCAGCAGTCCTCGAGAAACTGATTGTGTGTTTCATGGG 1265
Query 1376 CTACCCTCGATATGCTTCA-AATTCAGATGTCTACGAGGACCTTGATAAACTCACAAAAC 1434
| |||| | || ||| ||| ||||| |||||||||| |||||||||||||||||||
Sbjct 1266 TTGTCCTCAACATTATTCGGAAT-CAGATATCTACGAGGAGCTTGATAAACTCACAAAAC 1324
Query 1435 GTTCTC-AACAATGTCGAATTATC 1457
|||||| || | |||| |||||||
Sbjct 1325 GTTCTCTAAGA-TGTCAAATTATC 1347
> Ahg906917 jgi|Araly1|906917|Al_scaffold_0003_4045
Length=1125
Score = 676 bits (366), Expect = 0.0
Identities = 651/783 (83%), Gaps = 42/783 (5%)
Strand=Plus/Plus
Query 264 GATGAAGAATATGAACA-AGTGTTCATTAACTTCATCGACAGGTTTCTAGAGTTTAATCC 322
||||||||||||||| | |||||||||||||||||||||||||||||| || ||||||||
Sbjct 211 GATGAAGAATATGAA-ATAGTGTTCATTAACTTCATCGACAGGTTTCTCGATTTTAATCC 269
Query 323 TGAGTCAC-GCCTGCAAACATTCGAGGTAGATTACAA-AAGGCGTGAGATACGCGGGTTC 380
||| |||| | ||||| |||| |||||||| ||| ||| | |||||||| | ||||
Sbjct 270 TGATTCACAGAG-GCAAAAATTCAAGGTAGATGACAGTAAG-CATGAGATACTCATGTTC 327
Query 381 AAGGATCGGATCGGTACAGCGATTAACCGCGGAATTCGACTTCTAGATGCTGTGAGTAGT 440
||||||| | ||||||| |||||||||||||||||||||||| ||||||||||| |||
Sbjct 328 AAGGATCATAACGGTACAATGATTAACCGCGGAATTCGACTTCTTGATGCTGTGAGCAGT 387
Query 441 ACC-ATGTATTGGGAGGAGGAATGCATTATGTATCCTTATTTGGAGTTCATGCCTCTGAA 499
||| | ||| ||||| || ||||||||||||||||||| |||||||||||| ||||
Sbjct 388 ACCGAA-TATCAAGAGGATGACGGCATTATGTATCCTTATTTCGAGTTCATGCCTTTGAA 446
Query 500 TCTCTTTACAAGCAAGACGTTGGTTACTTTAAAGCTC-CGGGATTCGGCTCTTAACGATC 558
||| ||||| |||||||| | | || ||||||||||| | ||||| |||| ||||
Sbjct 447 TCTGTTTACGAGCAAGACATCGTTTTCTTTAAAGCTCTCTTT-TTCGGATCTTCGGGATC 505
Query 559 CGGGTTT-GCTTTCTATGCCTTGTCTTAA-GTTCATGATTCTTC-GTGAAGTTCGATGGT 615
||| ||| | ||||||||||||||||||| || |||| |||||| | ||| |||||||||
Sbjct 506 CGGATTTTG-TTTCTATGCCTTGTCTTAAAGT-CATGTTTCTTCAG-GAAATTCGATGGT 562
Query 616 CTGGTACCATG-AGTCTTGAGAAGCTTGTCTCTGGATGTCCTGTTCTTGAAGACCTGACC 674
||||||| ||| | |||||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct 563 CTGGTACTATGCA-TCTTGAAAAGCTTGTCTCAGGATGTCCTGTTCTTGAAGACTTGACC 621
Query 675 TTGGTAAGG-ACCTTGAT-ATG-TCATATTGATGACGATGAATTGCCGGTTACTCGT-GT 730
||||||||| | ||||| | | | | |||| || | | | || | |||| || ||
Sbjct 622 TTGGTAAGGTATCTTGACGAGGATGA-ATTGGTG-C--T---T-GC-GCTTACA-GTTGT 671
Query 731 GAGATCTCGGAGTCT-GAAGACGTTT-TATGTTCCGCTCGCGTATGGA-GT-AGGTTGTA 786
||| ||| |||| || |||||| ||| ||||||||| |||| |||||| || | |||||
Sbjct 672 GAGGTCTGGGAG-CTTGAAGAC-TTTATATGTTCCGTTCGCATATGGAAGTTA--TTGTA 727
Query 787 GGTCAAGAGTCCCAGACAAAGTACTTGAGATTGATGCTCCAGGACTAGAGAATATGACTC 846
| |||||||||||| ||| |||||||||||||||||||| |||||||||| |||||||||
Sbjct 728 GATCAAGAGTCCCAAACACAGTACTTGAGATTGATGCTCGAGGACTAGAGCATATGACTC 787
Query 847 TCAAAGAAGACCATTTCGATGGAA-TCGTGGTAAAGAACCTGACTTCTTTGTTCATGATT 905
|||||||| | |||||||| | || | | ||||||||||| |||| | |||||||||||
Sbjct 788 TCAAAGAAAAACATTTCGA-GAAAATTATAGTAAAGAACCTTACTTGTATGTTCATGATT 846
Query 906 GAACTTAATATCAAGTTTGCTGTCGATTACCGCAGGAGTTTTGATCCAGAGGACTTATCG 965
|| ||| || ||||||||| |||| | ||| |||| | ||||||||||||||| |||||
Sbjct 847 GACCTTGATTTCAAGTTTGTTGTCAAGTACGGCAGTATTTTTGATCCAGAGGATTTATCA 906
Query 966 AAGAGAAATGAAATTGGTGATTTTCTCACTGGGATATCTCGTGCAAGACATATGATCATC 1025
|||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 907 AAGACAAATGAAATCCTTGGTTTTCTCACTGGGATATCTCGTGCAAGACATATGATCATC 966
Query 1026 TCT 1028
|||
Sbjct 967 TCT 969
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61934738370
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5