BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT5G28160.1

Length=975
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg327005 jgi|Araly1|327005|fgenesh1_pm.C_scaffold_6002225           935    0.0  
  Ahg942435 jgi|Araly1|942435|scaffold_602979.1                        872    0.0  
  Ahg351806 jgi|Araly1|351806|fgenesh1_pg.C_scaffold_6002399           745    0.0  
  Ahg338454 jgi|Araly1|338454|fgenesh1_pg.C_scaffold_2000553           281    5e-75
  Ahg931168 jgi|Araly1|931168|scaffold_303625.1                       75.0    1e-12
  Ahg943935 jgi|Araly1|943935|scaffold_700164.1                       56.5    4e-07


> Ahg327005 jgi|Araly1|327005|fgenesh1_pm.C_scaffold_6002225
Length=1077

 Score =  935 bits (506),  Expect = 0.0
 Identities = 813/959 (85%), Gaps = 29/959 (3%)
 Strand=Plus/Plus

Query  26    CGTTTTTGTCACTACCTGATGAAATCATCTTGAGCTGTTTAGCCCGCATATCGAGATCGT  85
             |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||  
Sbjct  128   CGTTTTTGTCGCTCCCTGATGAAATCATCTTGAACTGTTTAGCCCGCATATCGAGATCAC  187

Query  86    ACTATCCGAAACTCTCCCTAGTTTGCAAGACCTTCCGCACTCTCCTCATATCTAATGAGC  145
             |||| |||||||||||||| || | ||||||||| ||| | || ||||| ||  || |||
Sbjct  188   ACTACCCGAAACTCTCCCTTGTCTCCAAGACCTTTCGCTCCCTTCTCATGTCCCATAAGC  247

Query  146   TCATTGTGGCGCGATTGCACCTCAAAACCCA-TGAAACCTTTTGTCATGTCTGCTTAAAG  204
             |||  |||| |||||| ||||| |||| ||| |||||| |||| ||||||||||||||||
Sbjct  248   TCAACGTGGAGCGATTTCACCTTAAAA-CCACTGAAACTTTTTTTCATGTCTGCTTAAAG  306

Query  205   TTTCCTGATAAACCTAATCCGTCAATGTTCACCCTCTGGATAAAACCTGGTAC-AATCTT  263
              ||||||||| ||||| ||| || ||||||||||| ||||||||||||||| | |||| |
Sbjct  307   CTTCCTGATAGACCTAGTCCCTCCATGTTCACCCTTTGGATAAAACCTGGT-CAAATCCT  365

Query  264   AACCAACCAACTTGAGAAGAACAAGAGGTCTACAAGAGATACTCGGTTGGTACAAATACC  323
             ||  |||||||| ||||||||  ||||||||||  |||||||||||||||||||||||||
Sbjct  366   AATGAACCAACTCGAGAAGAAGGAGAGGTCTACCGGAGATACTCGGTTGGTACAAATACC  425

Query  324   TTCTTCATATTATTATAATGTACCGTTTTACCTCGTTA-TGGTTGGTTCCGAAGTATACG  382
             ||| ||||||||| |||| |||||  ||||  || ||| | |||||||||||| | ||||
Sbjct  426   TTCGTCATATTATAATAAAGTACCACTTTATGTCATTACT-GTTGGTTCCGAATTGTACG  484

Query  383   GACTCAGCCAACGCAATGATCCGTCCTCCAACATGTTTGTCCGTAATAAGGGGGATAttt  442
             ||||||||||||||||||||||||||||||||||||| || |||||||||| |  | |||
Sbjct  485   GACTCAGCCAACGCAATGATCCGTCCTCCAACATGTTGGTGCGTAATAAGGAGT-T-TTT  542

Query  443   -ttttGT-GTAAAGC-CCCAAACATGACTGTAGCTCGAGCTAAAGCCAGTGCAGTTGTCT  499
              |||||  ||||  | ||||| ||||| ||||||||||||||||||| ||||||| ||||
Sbjct  543   GTTTTGCCGTAATTCTCCCAA-CATGATTGTAGCTCGAGCTAAAGCCCGTGCAGTCGTCT  601

Query  500   TCAATGGGAAAATATATGTGATGGGAGGTTGCATGGCTGATGAATCCGTGAATTGGGGTG  559
             || |||||||||||||||||||||||||||||  |||| ||||||||| |||||||||||
Sbjct  602   TCTATGGGAAAATATATGTGATGGGAGGTTGCGCGGCTAATGAATCCGCGAATTGGGGTG  661

Query  560   AAGTTTTTGACATAAAGACTCAAACTTGGGAAGCTTTACCTGACCCTGGTCCTGAGTTCC  619
             | |||||||||  ||||||||||| |||||||||||||||||||||||| || ||| |||
Sbjct  662   AGGTTTTTGACCCAAAGACTCAAATTTGGGAAGCTTTACCTGACCCTGGCCCGGAGCTCC  721

Query  620   GTTTTTCTTCAATTAGAAAAATAGATGTGTTCCAAGAAAAGCTTTACGTTAGAAGCAACG  679
             | |||||||||||||||  |||||| ||| || ||| |||||||||| ||||||||||||
Sbjct  722   GCTTTTCTTCAATTAGAGGAATAGAGGTGATCGAAGGAAAGCTTTACATTAGAAGCAACG  781

Query  680   AG-AAGAAAGACTCTGTTTATGATCCAAAAGAAG--AA-TGGAGA-GTGGTCAAAGGTTT  734
             || || ||||||||||||||||||||||||||||  || ||| || || | ||||    |
Sbjct  782   AGGAA-AAAGACTCTGTTTATGATCCAAAAGAAGGTAAATGG-GATGTTG-CAAAAAAAT  838

Query  735   AGACATGTTGAACAGGAATCTT-GGTTGTGGTACGATTGAAATTGTTCACTATGGCGGAA  793
               |||  | | | | | ||  | |||||||| | ||||||||| | | ||||||| || |
Sbjct  839   C-ACACCT-GCA-ATGTATGATAGGTTGTGGAATGATTGAAATAGCTAACTATGGTGGTA  895

Query  794   AACTCTTAATCTTATGGGACAAGGTAGATCTTTCTCATGACAAAGATATTTGGTGTGCGG  853
             ||||||||||||||||||||||| | | || |||||| || |||||||||||||||||  
Sbjct  896   AACTCTTAATCTTATGGGACAAGATTGGTCCTTCTCAAGAAAAAGATATTTGGTGTGCCT  955

Query  854   TGATTGCGCTTGAAAAACGTCATGGTAGTGATGAAGTTTGGGGAAACATTGAATGGGCT-  912
             |||||||| |||| |||||| |||||| |||||||||||||||||| ||||| |||||| 
Sbjct  956   TGATTGCGATTGAGAAACGTGATGGTATTGATGAAGTTTGGGGAAAAATTGAGTGGGCTA  1015

Query  913   GATATTGTGCTGACGGTTCC-TAGCTCATACGTTTTCGTGAATAGTCTAG-AAACTGGT  969
             | ||||||||| |||||||| | |||||||||||||| || ||||||||  |||| |||
Sbjct  1016  G-TATTGTGCTTACGGTTCCGT-GCTCATACGTTTTCTTGTATAGTCTACTAAACAGGT  1072


> Ahg942435 jgi|Araly1|942435|scaffold_602979.1
Length=1136

 Score =  872 bits (472),  Expect = 0.0
 Identities = 641/721 (89%), Gaps = 18/721 (2%)
 Strand=Plus/Plus

Query  1    ATGAATTCTGAAGTCG-AACGTCCATCGTTTTTGTCACTACCTGATGAAATCATCTTGAG  59
            |||| ||||||| ||| || ||||||||||||||||||| ||| |||||||| || | | 
Sbjct  25   ATGACTTCTGAATTCGCAA-GTCCATCGTTTTTGTCACTTCCTCATGAAATCGTCCTAAA  83

Query  60   CTGTTTAGCCCGCATATCGAGATCGTACTATCCGAAACTCTCCCTAGTTTGCAAGACCTT  119
            ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct  84   CTGTTTAGCTCGCATATCGAGATCGTACTATCCGAAACTCTCCCTAGTCTGCAAGACATT  143

Query  120  CCGCACTCTCCTCATATCTAATGAGCTCATTGTGGCGCGATTGCACCTCAAAACCCATGA  179
             |||||||||||||||||||| |||||||  ||||||||| ||||||| |||||||| ||
Sbjct  144  TCGCACTCTCCTCATATCTAAAGAGCTCACCGTGGCGCGAGTGCACCTTAAAACCCACGA  203

Query  180  AACCTTTTGTCATGTCTGCTTAAAGTTTCCTGATAAACCTAATCCGTCAATGTTCACCCT  239
            |||||||| ||||||||||||| |||| ||||||| ||||||||| ||||||||||||||
Sbjct  204  AACCTTTTTTCATGTCTGCTTACAGTTACCTGATAGACCTAATCCTTCAATGTTCACCCT  263

Query  240  CTGGATAAAACCTGGTAC-AATCTTAACCAACCAACTTGAGAAGAACAAGAGGTCTACAA  298
            |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||  
Sbjct  264  CTGGATAAAACCTGGT-CAAATCTTAACCAACCAACTTGAGAAGAACGAGAGGTCTACCG  322

Query  299  GAGATACTCGGTTGGTACAAATACCTTCTTCATATTATTATAATGTACCGTTTTACCTCG  358
            ||||||||||||||||||||||||||||||||||||||| ||| |||||   |||  || 
Sbjct  323  GAGATACTCGGTTGGTACAAATACCTTCTTCATATTATTCTAAAGTACCACCTTATGTCA  382

Query  359  TTA-TGGTTGGTTCCGAAGTA-TACGGACTCAGCCAAC-GCAATGATCCGTCCTCCAACA  415
            ||| || ||||||||||| |  |||||||||||||| | |||||||||||||||||| ||
Sbjct  383  TTACTG-TTGGTTCCGAA-TCGTACGGACTCAGCCA-CTGCAATGATCCGTCCTCCATCA  439

Query  416  TGTTTGTCCGTAATAAGGGGGATAttttt-ttGT-GTAAAGCCCCAAACATGACTGTAGC  473
            |||  || ||||| |||||| |  ||||| |||  |||||||||||||||||||||||||
Sbjct  440  TGTGGGTTCGTAAGAAGGGG-AC-TTTTTGTTGGCGTAAAGCCCCAAACATGACTGTAGC  497

Query  474  TCGAGCTAAAGCCAGTGCAGTT-GTCTTCAATGGGAAAATATATGTGATGGGAGGTTGCA  532
            |||||| ||||||  ||| ||  ||| ||| ||||||||||||||| |||||||||||||
Sbjct  498  TCGAGCCAAAGCCCTTGC-GTGCGTCCTCAGTGGGAAAATATATGTCATGGGAGGTTGCA  556

Query  533  TGGCTGATGAATCCGTGAATTGGGGTGAAGTTTTTGACATAAAGACTCAAACTTGGGAAG  592
             |||||||||| ||||||||||| |||| ||||| ||||||||| |||||||||||||| 
Sbjct  557  GGGCTGATGAACCCGTGAATTGGTGTGAGGTTTTCGACATAAAGTCTCAAACTTGGGAAC  616

Query  593  CTTTACCTGACCCTGG-TCCTGAGTTCCGTTTTTCTTCAATTAGAAAAATAGATGTGTTC  651
            |||||||||||||||| || |||| ||||||||||||||||||||||| |||| ||||||
Sbjct  617  CTTTACCTGACCCTGGCTC-TGAGCTCCGTTTTTCTTCAATTAGAAAATTAGAGGTGTTC  675

Query  652  CAAGAAAAGCTTTACGTTAGAAGCAACGAGAAGAAAGACTCTGTTTATGATCCAAAAGAA  711
             ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct  676  AAAGAAAAGCTTTACGTTAGAAGCAATGAGGAGAAAGACTCTGTTTATGATCCAAAAGAA  735

Query  712  G  712
            |
Sbjct  736  G  736


 Score =  302 bits (163),  Expect = 4e-81
 Identities = 231/262 (88%), Gaps = 11/262 (4%)
 Strand=Plus/Plus

Query  710   AAGAATGGAGAGTGGTCAAAGGTTTAGACATGTTGAACAGGAATCTTGGTTGTGGTACGA  769
             ||||||| ||| |||||| ||||||||| |||||||||  ||||||||||||||| | ||
Sbjct  842   AAGAATGTAGACTGGTCAGAGGTTTAGATATGTTGAACCTGAATCTTGGTTGTGGAATGA  901

Query  770   TTGAAATTGTTCACTATGGCGGA-AAACTCTTAATCTTATGGGACAAG---GTAGATC--  823
             ||||||| | | |||||||  || ||||||||||||||||||||||||   ||  |||  
Sbjct  902   TTGAAATAGCTAACTATGG-TGAGAAACTCTTAATCTTATGGGACAAGTTTGTTCATCGT  960

Query  824   --T--TTCTCATGACAAAGATATTTGGTGTGCGGTGATTGCGCTTGAAAAACGTCATGGT  879
               |  || ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  961   GGTACTTGTCAAGACAAAGATATTTGGTGTGCGGTGATTGCGCTTGAAAAACGTGATGGT  1020

Query  880   AGTGATGAAGTTTGGGGAAACATTGAATGGGCTGATATTGTGCTGACGGTTCCTAGCTCA  939
             |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct  1021  AGTGATGAAGTTTGGGGAAACATTGAGTGGGCTGATATTGTGATGACGGTTTCTAGCTCA  1080

Query  940   TACGTTTTCGTGAATAGTCTAG  961
             ||||||||||||||||||||||
Sbjct  1081  TACGTTTTCGTGAATAGTCTAG  1102


> Ahg351806 jgi|Araly1|351806|fgenesh1_pg.C_scaffold_6002399
Length=1038

 Score =  745 bits (403),  Expect = 0.0
 Identities = 605/700 (86%), Gaps = 23/700 (3%)
 Strand=Plus/Plus

Query  26   CGTTTTTGTC---ACTACCTGATGAAATCATCTTGAGCTGTTTAGCCCGCATATCGAGAT  82
            ||||||||||    || |||||||||||| |||||| |||||||||||||||||||||||
Sbjct  128  CGTTTTTGTCGTTGCTCCCTGATGAAATCGTCTTGAACTGTTTAGCCCGCATATCGAGAT  187

Query  83   CGTACTATCCGAAACTCTCCCTAGTTTGCAAGACCTTCCGCACTCTCCTCATATCTAATG  142
            | |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct  188  CATACTATGCGAAACTCTCCCTAGTCTGCAAGACCTTCCGCACTCTCCTCATTTCTAATG  247

Query  143  AGCTCATTGTGGCGCGATTGCACCTCAAAACCCATGAAACCTT-TTGTCATGTCTGCTTA  201
            |||||| ||||||| |||||||||| ||||||||| ||||||| || |||||||||||||
Sbjct  248  AGCTCACTGTGGCGAGATTGCACCTTAAAACCCATAAAACCTTATT-TCATGTCTGCTTA  306

Query  202  AAG-TTTCCTGATAAACCTAATCCGTCAATGTTCACCCTCTGGATAAAACCTGGTAC-AA  259
             || ||||| |||||||||  | | ||  ||||   ||||||||||||||||||| | ||
Sbjct  307  CAGTTTTCC-GATAAACCTTGTTCATCCTTGTTTGTCCTCTGGATAAAACCTGGT-CAAA  364

Query  260  TCTTAACCAACCAACTTGAGAAGAACAAGAGGTCTA-CAAGAGATACTCGGTTGGTACAA  318
             | ||||||||||||| ||||||||  |||| |||| |  |||||||||||||||||| |
Sbjct  365  CCCTAACCAACCAACTCGAGAAGAAGGAGAGATCTATC-GGAGATACTCGGTTGGTACCA  423

Query  319  ATACCTTCTTCATATTATTATAATGTACCGTTTTAC-CTCGTTAT-GGTTGGTTCCGAAG  376
            ||||||||||| |||| || ||  ||||| |||||| | | || |  |||||||| ||||
Sbjct  424  ATACCTTCTTCCTATTGTTCTACGGTACCATTTTACAC-CATT-TCAGTTGGTTCAGAAG  481

Query  377  TATACGGACTCAGCCAACGCAATGATCCGTCCTCCAACATGTTTGTCCGTAATAAGGGGG  436
            | ||||||||||  |||   |||||||| |||||||  ||||  ||||||||||| |  |
Sbjct  482  TGTACGGACTCAAACAATATAATGATCCATCCTCCATGATGTGGGTCCGTAATAA-GAAG  540

Query  437  ATA-tt-tttttGTGTAAAGCCCCAAACATGACTGTAGCTCGAGCTAAAGCCAGTGCA-G  493
            | | || |||| | |||||||||| |||||||||||||||||||| ||||||| |||| |
Sbjct  541  A-ACTTGTTTTGGCGTAAAGCCCCCAACATGACTGTAGCTCGAGCGAAAGCCATTGCACG  599

Query  494  TTGTCTTCAATGGGAAAATATATGTGATGGGAGGTTGCATGGCTGATGAATCCGTGAATT  553
              |||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct  600  -CGTCCACAATGGGAAAATATATGTAATGGGAGGTTGCAGGGCTGATGAATCCGCGAATT  658

Query  554  GGGGTGAAGTTTTTGACATAAAGACTCAAACTTGGGAAGCTTTACCTGACCCTGGTC-CT  612
            ||||||| ||||| ||||||| |||||||||||||||| |||||||||||||||| | ||
Sbjct  659  GGGGTGAGGTTTTCGACATAATGACTCAAACTTGGGAACCTTTACCTGACCCTGG-CGCT  717

Query  613  GAGTTCCGTTTTTCTTCAATTAGAAAAATAGATGTGTTCCAAGAAAAGCTTTACGTTAGA  672
            ||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct  718  GAGCTCCGCTTTTCTTCAATTAGAAAAATAGAAGTGTTCCAAGGAAAGCTTTACGTTAGA  777

Query  673  AGCAACGAGAAGAAAGACTCTGTTTATGATCCAAAAGAAG  712
            ||||| ||||||||||||||||||||||||||||||||||
Sbjct  778  AGCAATGAGAAGAAAGACTCTGTTTATGATCCAAAAGAAG  817


 Score =  187 bits (101),  Expect = 1e-46
 Identities = 178/213 (84%), Gaps = 13/213 (6%)
 Strand=Plus/Plus

Query  763   GGTACGATTGAAATTGTTCACTATGGCGGAAAACTCTTAATCTTATGGGACAA----G-G  817
             |||| ||||||||| | | ||||||| || |||||||||||||||||||||||    | |
Sbjct  817   GGTATGATTGAAATAGCTAACTATGGTGGGAAACTCTTAATCTTATGGGACAAGTTTGTG  876

Query  818   --T-A-GAT-CTTTCTCATGACAAAGATATTTGGTGTGCGGTGATTGCGCTTGAAAAACG  872
               | | | | | || ||| || |||||||||||||||||  ||||||||||||||| |||
Sbjct  877   CTTCATGGTAC-TTGTCAAGAGAAAGATATTTGGTGTGCCCTGATTGCGCTTGAAAGACG  935

Query  873   TC-ATGGTAGTGATGAAGTTTGGGGAAACATTGAATGGGCTGATATTGTGCTGACGGTTC  931
              | ||||||||||||||||||||||||||||||| |||||| |||||||| |||| ||||
Sbjct  936   -CGATGGTAGTGATGAAGTTTGGGGAAACATTGACTGGGCTAATATTGTGTTGACCGTTC  994

Query  932   CTAGCTCATACGTTTTCGTGAATAGTCTAGAAA  964
             ||| | |||| ||||| |||||||||||| |||
Sbjct  995   CTAACGCATATGTTTTTGTGAATAGTCTAAAAA  1027


> Ahg338454 jgi|Araly1|338454|fgenesh1_pg.C_scaffold_2000553
Length=816

 Score =  281 bits (152),  Expect = 5e-75
 Identities = 326/407 (80%), Gaps = 24/407 (6%)
 Strand=Plus/Plus

Query  21   TCCATCGTTTTTGTCACTACCTGATGAAATCATCTTGAGCTGTTTAGCCCGCATATCGAG  80
            |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||
Sbjct  36   TCCATCATTTTTGTCACTTCCTGAAGAAATCATCTTGACCTGTTTAGCCCGCATACCGAG  95

Query  81   ATCGTACTATCCGAAACTCTCCCTAGTTTGCAAGACCTTCCGCACTCTCCTCATATCTAA  140
            ||||||||||||||||||||||||||| ||||||||||| ||| ||||| || |||| ||
Sbjct  96   ATCGTACTATCCGAAACTCTCCCTAGTCTGCAAGACCTTTCGCTCTCTCATCGTATCAAA  155

Query  141  TGAGCTCATTGTGGCGCGATTGCACCTCAAAACCCATGAAACCTTTTGTCATGTCTG-CT  199
             |||||||  |  || ||||| ||||| ||||| || |||||| | | ||| ||||| ||
Sbjct  156  AGAGCTCAACGACGCCCGATTTCACCTTAAAACACAAGAAACCGTGTATCAAGTCTGTCT  215

Query  200  TAAAGTTT-CCTGATAAACCTAATCCGTCAATGTT-CACCCTCTGGATAAAACCTGGTAC  257
             | ||||| || ||||| ||| |||| ||  || | |||||||||||||||||||||| |
Sbjct  216  -ACAGTTTACC-GATAATCCTCATCCCTCT-TGGTACACCCTCTGGATAAAACCTGGT-C  271

Query  258  AA-TCTTAACCAACCAACTTGAGAAGAACAAGAGGTCTACAAGAGAT-ACTCGGTTGGTA  315
            || || ||||||||||||| ||| |||| | || ||||| |  | || | ||||||||||
Sbjct  272  AAATCCTAACCAACCAACTCGAGGAGAAGACGAAGTCTA-ACCATATTATTCGGTTGGTA  330

Query  316  CAAATACCTTCTTCATATTATTATAATGTACCGTTTTAC-C-TCGTTATG-GTTGGTTCC  372
             |    | |||||| | ||| | | ||||||| ||  || | | ||| |  |||||||| 
Sbjct  331  -A----C-TTCTTCTTGTTACTCTTATGTACCATT--ACGCATAGTT-TCCGTTGGTTCA  381

Query  373  GAAGTATACGGACTCAGCCAA-CGCAATGATCCGTCCTCCAACATGT  418
            ||| | |||||| |||||| | | || || ||||||||| |||||||
Sbjct  382  GAAATGTACGGAATCAGCCGATC-CAGTGCTCCGTCCTCGAACATGT  427


> Ahg931168 jgi|Araly1|931168|scaffold_303625.1
Length=225

 Score = 75.0 bits (40),  Expect = 1e-12
 Identities = 65/76 (86%), Gaps = 5/76 (7%)
 Strand=Plus/Plus

Query  841  ATTTGGTGTGCGGTGATTGCGCTTGAAAAACGTCATGGTAGTGATGA-AGTTTGGGGAAA  899
            |||||||||||||||||||||||||||| ||  || | |||||| || | ||||||||||
Sbjct  70   ATTTGGTGTGCGGTGATTGCGCTTGAAAGACA-CA-G-TAGTGAAGAGA-TTTGGGGAAA  125

Query  900  CATTGAATGGGCTGAT  915
             ||||| |||| ||||
Sbjct  126  GATTGAGTGGGTTGAT  141


> Ahg943935 jgi|Araly1|943935|scaffold_700164.1
Length=1232

 Score = 56.5 bits (30),  Expect = 4e-07
 Identities = 33/34 (97%), Gaps = 1/34 (3%)
 Strand=Plus/Plus

Query  836   AAGAT-ATTTGGTGTGCGGTGATTGCGCTTGAAA  868
             ||||| ||||||||||||||||||||||||||||
Sbjct  1071  AAGATGATTTGGTGTGCGGTGATTGCGCTTGAAA  1104



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 36216771150


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5