BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G34885.1
Length=711
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494722 jgi|Araly1|494722|fgenesh2_kg.8__538__AT5G42955.1 571 2e-162
Ahg948919 jgi|Araly1|948919|scaffold_800806.1 540 6e-153
Ahg952316 jgi|Araly1|952316|scaffold_58500002.1 536 7e-152
Ahg948923 jgi|Araly1|948923|scaffold_800810.1 536 7e-152
Ahg948921 jgi|Araly1|948921|scaffold_800808.1 536 7e-152
Ahg948918 jgi|Araly1|948918|scaffold_800805.1 534 3e-151
Ahg948916 jgi|Araly1|948916|scaffold_800803.1 534 3e-151
Ahg949066 jgi|Araly1|949066|scaffold_800953.1 531 3e-150
Ahg948917 jgi|Araly1|948917|scaffold_800804.1 531 3e-150
Ahg952224 jgi|Araly1|952224|scaffold_47400001.1 521 2e-147
Ahg497471 jgi|Araly1|497471|fgenesh2_kg.585__1__AT5G42955.1 488 2e-137
Ahg494746 jgi|Araly1|494746|fgenesh2_kg.8__562__AT5G42955.1 477 5e-134
Ahg333428 jgi|Araly1|333428|fgenesh1_pm.C_scaffold_1006000001 455 2e-127
Ahg497449 jgi|Araly1|497449|fgenesh2_kg.474__9__AT5G42955.1 226 2e-58
Ahg497454 jgi|Araly1|497454|fgenesh2_kg.474__14__AT5G42957.1 211 5e-54
Ahg315391 jgi|Araly1|315391|fgenesh1_pm.C_scaffold_2000424 128 5e-29
> Ahg494722 jgi|Araly1|494722|fgenesh2_kg.8__538__AT5G42955.1
Length=414
Score = 571 bits (309), Expect = 2e-162
Identities = 379/414 (92%), Gaps = 0/414 (0%)
Strand=Plus/Plus
Query 30 TAAAATAAAAATATTTCTTGTACATTTCAATCATAAGTAGATATGGCTAAATTTAACTCT 89
|||||||| |||| |||||||||||||||| | |||||||||||| ||||||||| ||||
Sbjct 1 TAAAATAAGAATAATTCTTGTACATTTCAAGCGTAAGTAGATATGTCTAAATTTAGCTCT 60
Query 90 CAGATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCA 149
|| ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||
Sbjct 61 CATATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGTGTTTGTTCCGGTTTTCTCA 120
Query 150 GTCAAAGAAGCTGAAGCAAATTTATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAG 209
||| |||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||
Sbjct 121 GTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAG 180
Query 210 TGTGCGTTAGATATAATTGCTGCTGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGC 269
|||||||| |||||||| | || |||||| ||||||||||| || |||||||||||||||
Sbjct 181 TGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGC 240
Query 270 AACGATCTTGTCAAAGAAGGAAAAGTGTGTCACGATACGCTTATTAAATATATTGCAGAT 329
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 241 AACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGCTTATTAAATATATTGCAGAT 300
Query 330 AAACCCATGTTAATTGCTCACGAAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAA 389
|||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 301 AAACCCATGTTACTTGCCCACGAAACAGAATACTTGAAGAAGAGTGCTGACTTGTGGAAT 360
Query 390 CATTGTGTCTCAATCTCCAAAAGTGCTTGAAATGTATATTGCGTGTACTATTTT 443
||||||||||||||||| ||||||||||||||| | |||||| |||||||||||
Sbjct 361 CATTGTGTCTCAATCTCGAAAAGTGCTTGAAATATGTATTGCTTGTACTATTTT 414
> Ahg948919 jgi|Araly1|948919|scaffold_800806.1
Length=390
Score = 540 bits (292), Expect = 6e-153
Identities = 357/389 (92%), Gaps = 2/389 (1%)
Strand=Plus/Plus
Query 53 ATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGT 112
|||| || | |||||||||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct 3 ATTTTAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGT 62
Query 113 TGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTT 172
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 63 TGTAGCTTTGGTGTGTGCGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATC 122
Query 173 ATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGC 232
|||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||
Sbjct 123 ATTATGGAATACTTGTGTTGTTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGT 182
Query 233 TGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAA-GGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||| ||||
Sbjct 183 TGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAA 242
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 243 AA-TGTGTCACGATACACTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 301
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 302 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAA 361
Query 412 GTGCTTGAAATGTATATTGCGTGTACTAT 440
|| |||||| | | ||||| ||||||||
Sbjct 362 GTACTTGAACTTTGTATTGTTTGTACTAT 390
> Ahg952316 jgi|Araly1|952316|scaffold_58500002.1
Length=389
Score = 536 bits (290), Expect = 7e-152
Identities = 356/389 (92%), Gaps = 0/389 (0%)
Strand=Plus/Plus
Query 52 CATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTG 111
|||||||| | |||||||||||| ||||||||| |||||| ||||||||||||||||| |
Sbjct 1 CATTTCAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCG 60
Query 112 TTGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATT 171
|||||||||||||||||| |||||||| |||||||||| |||||||| ||||||| |
Sbjct 61 TTGTAGCTTTGGTGTGTGTGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTAAAGCAAAAT 120
Query 172 TATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTG 231
||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| | ||
Sbjct 121 CATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTG 180
Query 232 CTGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAAGGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct 181 TTGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGA 240
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 241 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 300
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 301 AAACAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAA 360
Query 412 GTGCTTGAAATGTATATTGCGTGTACTAT 440
||||||||||| | |||||| ||||||||
Sbjct 361 GTGCTTGAAATATGTATTGCTTGTACTAT 389
> Ahg948923 jgi|Araly1|948923|scaffold_800810.1
Length=389
Score = 536 bits (290), Expect = 7e-152
Identities = 358/391 (92%), Gaps = 4/391 (1%)
Strand=Plus/Plus
Query 52 CATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTG 111
|||||||| | |||||||||||| ||||||||| |||||| ||||||||||||||||| |
Sbjct 1 CATTTCAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCG 60
Query 112 TTGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATT 171
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 61 TTGTAGCTTTGGTGTGTGTGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAAT 120
Query 172 TATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTG 231
||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||
Sbjct 121 CATTATGGAATACTTGTCTTGTTAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTG 180
Query 232 CTGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAAGGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct 181 TTGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGA 240
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 241 AAGTGTGTCACGATACACTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 300
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 301 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCGAAAA 360
Query 412 GTGCTTGA-A-ATGTATATTGCGTGTACTAT 440
|||||||| | |||||| || | ||||||||
Sbjct 361 GTGCTTGATATATGTAT-TT-CTTGTACTAT 389
> Ahg948921 jgi|Araly1|948921|scaffold_800808.1
Length=389
Score = 536 bits (290), Expect = 7e-152
Identities = 358/391 (92%), Gaps = 4/391 (1%)
Strand=Plus/Plus
Query 52 CATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTG 111
|||||||| | |||||||||||| ||||||||| |||||| ||||||||||||||||| |
Sbjct 1 CATTTCAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAAATTACTACGCTATTCATCG 60
Query 112 TTGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATT 171
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 61 TTGTAGCTTTGGTGTGTGTGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAAT 120
Query 172 TATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTG 231
||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| | ||
Sbjct 121 CATTATGGAATACTTGTCTTGTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTG 180
Query 232 CTGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAAGGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct 181 TTGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGA 240
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 241 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 300
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 301 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCGAAAA 360
Query 412 GTGCTTGA-A-ATGTATATTGCGTGTACTAT 440
|||||||| | |||||| || | ||||||||
Sbjct 361 GTGCTTGATATATGTAT-TT-CTTGTACTAT 389
> Ahg948918 jgi|Araly1|948918|scaffold_800805.1
Length=390
Score = 534 bits (289), Expect = 3e-151
Identities = 356/389 (92%), Gaps = 2/389 (1%)
Strand=Plus/Plus
Query 53 ATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGT 112
|||| || | |||||||||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct 3 ATTTTAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGT 62
Query 113 TGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTT 172
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 63 TGTAGCTTTGGTGTGTGCGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATC 122
Query 173 ATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGC 232
|||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||
Sbjct 123 ATTATGGAATACTTGTGTTGTTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGT 182
Query 233 TGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAA-GGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| || |||||| ||||
Sbjct 183 TGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTTAAAGAAGGGAA 242
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 243 AA-TGTGTCACGATACACTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 301
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 302 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAA 361
Query 412 GTGCTTGAAATGTATATTGCGTGTACTAT 440
|| |||||| | | ||||| ||||||||
Sbjct 362 GTACTTGAACTTTGTATTGTTTGTACTAT 390
> Ahg948916 jgi|Araly1|948916|scaffold_800803.1
Length=390
Score = 534 bits (289), Expect = 3e-151
Identities = 356/389 (92%), Gaps = 2/389 (1%)
Strand=Plus/Plus
Query 53 ATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGT 112
|||| || | |||||||||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct 3 ATTTTAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGT 62
Query 113 TGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTT 172
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 63 TGTAGCTTTGGTGTGTGCGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATC 122
Query 173 ATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGC 232
||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct 123 ATTATGGAATACTTGTCTTGTTAAACTCACTCCTAAGTGTGCGTTGGATATAATCGCTGT 182
Query 233 TGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAA-GGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||| ||||
Sbjct 183 TGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAA 242
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
|| |||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 243 AA-TGTGTCACGAAACACTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 301
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 302 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAA 361
Query 412 GTGCTTGAAATGTATATTGCGTGTACTAT 440
|| |||||| | | ||||| ||||||||
Sbjct 362 GTACTTGAACTTTGTATTGTTTGTACTAT 390
> Ahg949066 jgi|Araly1|949066|scaffold_800953.1
Length=390
Score = 531 bits (287), Expect = 3e-150
Identities = 356/390 (91%), Gaps = 2/390 (1%)
Strand=Plus/Plus
Query 53 ATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGT 112
||||||| | |||||||||||| |||||||| |||||||||||||||||||||||| ||
Sbjct 2 ATTTCAAGCGTAAGTAGATATGTCTAAATTTTGCTCTCAGATTACTACGCTATTCATCGT 61
Query 113 TGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTT 172
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 62 TGTAGCTTTGGTGTGTGCGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATC 121
Query 173 ATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGC 232
||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||
Sbjct 122 ATTATGGAATACTTGTCTTGTTAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGT 181
Query 233 TGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAAGGAAA 292
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| ||
Sbjct 182 TGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAA 241
Query 293 AGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGA 352
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 242 AGTTTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGA 301
Query 353 AACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCT-CAATCTCCAAAA 411
|||||||||||||||||||||| ||||||| ||||| |||||||| | ||||||||||||
Sbjct 302 AACAGAATACTTGAAGAAGAGTAATGACTTATGGAATCATTGTGT-TACAATCTCCAAAA 360
Query 412 GTGCTTGAAATGTATATTGCGTGTACTATT 441
|||| |||||| | |||||| |||||||||
Sbjct 361 GTGCATGAAATATGTATTGCTTGTACTATT 390
> Ahg948917 jgi|Araly1|948917|scaffold_800804.1
Length=390
Score = 531 bits (287), Expect = 3e-150
Identities = 348/378 (92%), Gaps = 2/378 (1%)
Strand=Plus/Plus
Query 64 AAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGTTGTAGCTTTGG 123
||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 14 AAGTAGATATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGG 73
Query 124 TGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTTATTATGGAATA 183
||||||| |||||||| |||||||||| |||||||||||||||| | |||||||||||
Sbjct 74 TGTGTGCGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATA 133
Query 184 CTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGCTGTCTTCGAAA 243
|||||||||||||| |||| |||||||||||||| ||||||||||||| |||||| ||||
Sbjct 134 CTTGTCTTGTTAAAATCACACCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAA 193
Query 244 ATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAA-GGAAAAGTGTGTCAC 302
||||||| || ||||||||||| ||||||||||| ||||||||| |||||| ||||||||
Sbjct 194 ATGGAACCATCTCTGATCCTTGCTGCAACGATCTCGTCAAAGAAGGGAAAA-TGTGTCAC 252
Query 303 GATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAACAGAATAC 362
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 253 GATACACTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATAC 312
Query 363 TTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGAAAT 422
|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
Sbjct 313 TTGAAGAAGAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTACTTGAACT 372
Query 423 GTATATTGCGTGTACTAT 440
| ||||| ||||||||
Sbjct 373 TTGTATTGTTTGTACTAT 390
> Ahg952224 jgi|Araly1|952224|scaffold_47400001.1
Length=390
Score = 521 bits (282), Expect = 2e-147
Identities = 354/390 (91%), Gaps = 0/390 (0%)
Strand=Plus/Plus
Query 52 CATTTCAATCATAAGTAGATATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTG 111
||||| || | |||||||||||| ||||||||| |||||| ||||||| ||||||||| |
Sbjct 1 CATTTGAAGCGTAAGTAGATATGTCTAAATTTAGCTCTCAAATTACTATGCTATTCATCG 60
Query 112 TTGTAGCTTTGGTGTGTGCATTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATT 171
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |
Sbjct 61 TTGTAGCTTTGGTGTGTGTGTTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAAT 120
Query 172 TATTATGGAATACTTGTCTTGTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTG 231
||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||| | ||
Sbjct 121 CATTATGGAATACTTGTCTTGTAAAAATCAATCCTAAGTGTGCGTTGGATATAATCGGTG 180
Query 232 CTGTCTTCGAAAATGGAACAATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAAGGAA 291
|||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct 181 TTGTCTTTGAAAATGGAACCATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGA 240
Query 292 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 241 AAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACG 300
Query 352 AAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAA 411
||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 301 AAACACAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAA 360
Query 412 GTGCTTGAAATGTATATTGCGTGTACTATT 441
||||||||||| | |||||| |||||||||
Sbjct 361 GTGCTTGAAATATGTATTGCTTGTACTATT 390
> Ahg497471 jgi|Araly1|497471|fgenesh2_kg.585__1__AT5G42955.1
Length=348
Score = 488 bits (264), Expect = 2e-137
Identities = 320/348 (92%), Gaps = 0/348 (0%)
Strand=Plus/Plus
Query 72 ATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCA 131
||| ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||
Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACTATGCTATTCATCGTTGTAGCTTTGGTGTGTGTG 60
Query 132 TTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTTATTATGGAATACTTGTCTT 191
|||||||| |||||||||| |||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120
Query 192 GTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGCTGTCTTCGAAAATGGAACA 251
|| ||| ||||||||||||||||||| |||||||| | || |||||| |||||||||||
Sbjct 121 GTAAAAATCACTCCTAAGTGTGCGTTGGATATAATCGGTGTTGTCTTTGAAAATGGAACC 180
Query 252 ATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAAGGAAAAGTGTGTCACGATACGCTT 311
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 181 ATCTCTGATCCTTGTTGCAACGATCTCGTCAAAGAAGGGAAAGTGTGTCACGATACGCTT 240
Query 312 ATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAACAGAATACTTGAAGAAG 371
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 241 ATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGAAG 300
Query 372 AGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 419
|||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 301 AGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTGCTTGA 348
> Ahg494746 jgi|Araly1|494746|fgenesh2_kg.8__562__AT5G42955.1
Length=348
Score = 477 bits (258), Expect = 5e-134
Identities = 319/349 (91%), Gaps = 2/349 (1%)
Strand=Plus/Plus
Query 72 ATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCA 131
||| ||||||||| |||||| ||||| || ||||| ||||||||| |||||||||||||
Sbjct 1 ATGTCTAAATTTAGCTCTCAAATTACCACTCTATTTATTGTTGTAACTTTGGTGTGTGCG 60
Query 132 TTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTTATTATGGAATACTTGTCTT 191
||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 61 TTTGTTCTGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATTATTATGGAATACTTGTCTT 120
Query 192 GTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGCTGTCTTCGAAAATGGAACA 251
||||| |||||||||| |||||||| |||||||| |||| |||||| |||||||||||
Sbjct 121 CTTAAAATCACTCCTAACTGTGCGTTGGATATAATCGCTGTTGTCTTTGAAAATGGAACC 180
Query 252 ATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAA-GGAAAAGTGTGTCACGATACGCT 310
|| ||||||||||||||||||||||| |||||||| |||||| |||||||||||| |||
Sbjct 181 ATCTCTGATCCTTGTTGCAACGATCTCATCAAAGAAGGGAAAA-TGTGTCACGATAAGCT 239
Query 311 TATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAACAGAATACTTGAAGAA 370
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 240 TATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGAA 299
Query 371 GAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTGCTTGA 419
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 300 GAGTGATGACTTGTGGAATCATTGTGTCTCAATCTCCAAAAGTGCTTGA 348
> Ahg333428 jgi|Araly1|333428|fgenesh1_pm.C_scaffold_1006000001
Length=390
Score = 455 bits (246), Expect = 2e-127
Identities = 299/325 (92%), Gaps = 2/325 (1%)
Strand=Plus/Plus
Query 72 ATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCA 131
||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1 ATGTCTAAATTTAGCTCTCAGATTACTACGCTATTCATCGTTGTAGCTTTGGTGTGTGCG 60
Query 132 TTTGTTCCAACTTTCTCAGTCAAAGAAGCTGAAGCAAATTTATTATGGAATACTTGTCTT 191
|||||||| |||||||||| |||||||||||||||| | |||||||||||||||||||
Sbjct 61 TTTGTTCCGGTTTTCTCAGTCGAAGAAGCTGAAGCAAAATCATTATGGAATACTTGTCTT 120
Query 192 GTTAAATTCACTCCTAAGTGTGCGTTAGATATAATTGCTGCTGTCTTCGAAAATGGAACA 251
||||| ||||||||||||||||||| ||||||||||||| |||||| |||| ||| ||
Sbjct 121 ATTAAAATCACTCCTAAGTGTGCGTTGGATATAATTGCTGTTGTCTTTGAAATTGGTACC 180
Query 252 ATGTCTGATCCTTGTTGCAACGATCTTGTCAAAGAA-GGAAAAGTGTGTCACGATACGCT 310
|| ||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| ||
Sbjct 181 ATCTCTGATCCTTGCTGCAACGATCTCGTCAAAGAAGGGAAAA-TGTGTCACGATACACT 239
Query 311 TATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAACAGAATACTTGAAGAA 370
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 240 TATTAAATATATTGCAGATAAACCCATGTTAATTGCCCACGAAACAGAATACTTGAAGAA 299
Query 371 GAGTGATGACTTGTGGAAACATTGT 395
|||||||||||||||||| ||||||
Sbjct 300 GAGTGATGACTTGTGGAATCATTGT 324
> Ahg497449 jgi|Araly1|497449|fgenesh2_kg.474__9__AT5G42955.1
Length=384
Score = 226 bits (122), Expect = 2e-58
Identities = 140/149 (94%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 295 TGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATTGCTCACGAAA 354
|||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 236 TGTGTCACGATATGCTTATTAAATATATTGCAGATAAACCCATGTTCATTGCCCACGAAA 295
Query 355 CAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATCTCCAAAAGTG 414
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 296 CAGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATCTCGAAAAGTG 355
Query 415 CTTGAAATGTATATTGCGTGTACTATTTT 443
|||||||| | |||||| |||||||||||
Sbjct 356 CTTGAAATATGTATTGCTTGTACTATTTT 384
> Ahg497454 jgi|Araly1|497454|fgenesh2_kg.474__14__AT5G42957.1
Length=291
Score = 211 bits (114), Expect = 5e-54
Identities = 128/135 (95%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 285 GAAGGAAAAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATT 344
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 157 GAAGGGAAAGTGTGTCACGATACGCTTATTAAATATATTGCAGATAAACCCATGTTAATT 216
Query 345 GCTCACGAAACAGAATACTTGAAGAAGAGTGATGACTTGTGGAAACATTGTGTCTCAATC 404
|| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 217 GCCCACGAAACTGAATACTTGAAGAAGAGTGCTGACTTGTGGAATCATTGTGTCTCAATC 276
Query 405 TCCAAAAGTGCTTGA 419
|| |||| |||||||
Sbjct 277 TCGAAAATTGCTTGA 291
> Ahg315391 jgi|Araly1|315391|fgenesh1_pm.C_scaffold_2000424
Length=309
Score = 128 bits (69), Expect = 5e-29
Identities = 107/125 (86%), Gaps = 4/125 (3%)
Strand=Plus/Plus
Query 72 ATGGCTAAATTTAACTCTCAGATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCA 131
||||||||| ||| ||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTAAACTTAGCTCCCATATTACTACGCTATTCATTGTTGTAGCTTTGGTGTGTGCG 60
Query 132 TTTGTTCCA--ACTTTCTCAGTCAAAGAAGCTGAAGCAAATTTATTATGGAATACTTGTC 189
|||||||| | ||| ||||| ||||||| || ||||| | ||||||| | |||||||
Sbjct 61 TTTGTTCCTGTA-TTT-TCAGTTGAAGAAGCCGAGGCAAAATCATTATGGGACACTTGTC 118
Query 190 TTGTT 194
|||||
Sbjct 119 TTGTT 123
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 26152321062
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5