BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G35715.1
Length=1522
Score E
Sequences producing significant alignments: (Bits) Value
Ahg898260 jgi|Araly1|898260|Al_scaffold_0005_2226 1504 0.0
Ahg898261 jgi|Araly1|898261|Al_scaffold_0005_2227 1339 0.0
Ahg323127 jgi|Araly1|323127|fgenesh1_pm.C_scaffold_5000671 1024 0.0
Ahg938228 jgi|Araly1|938228|scaffold_502419.1 1022 0.0
Ahg484387 jgi|Araly1|484387|fgenesh2_kg.5__379__AT3G26190.1 946 0.0
> Ahg898260 jgi|Araly1|898260|Al_scaffold_0005_2226
Length=1521
Score = 1504 bits (814), Expect = 0.0
Identities = 1291/1519 (85%), Gaps = 41/1519 (3%)
Strand=Plus/Plus
Query 9 GTCTATCTTACTATG-TTTCTTCTTCCTTTTCCCTCTCCTTTTAACCCTCTTTAAGAAGC 67
||||||||| ||||| |||| | ||||| ||||||||| |||| | | ||||| |||
Sbjct 3 GTCTATCTTCCTATGTTTTC-TATTCCTCTTCCCTCTCTTTTTGATTATATTTAAAAAGA 61
Query 68 TTTTACCTTCG-AAATGGAAGCTTCCTCCCGGACCTACAGGTCTTCCGATCATCGGAAAC 126
||| ||||||| |||| |||||||||||| |||||||| ||||||||||| || |||||
Sbjct 62 TTTCACCTTCGAAAAT-GAAGCTTCCTCCGGGACCTACGGGTCTTCCGATTATAGGAAAT 120
Query 127 TTGCACCAAGCTTGGAAGATTGCTTCATAGTTCTTTTCACAAGCTCTCTTTAGAACATGG 186
||||||| || |||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 121 TTGCACC-AGTTTGGAAGATTGCTTCACAGTTCTCTTCACAAGCTCTCTTTAGAACATGG 179
Query 187 ACCAGTGATGCTTCTCCGTTTCGGGGTCGTCCC-GATGGTTGTTATCTCTTCCAAGGAAG 245
|||||||||||||||||||||||||||||||| | | || || ||||| ||||||||||
Sbjct 180 GCCAGTGATGCTTCTCCGTTTCGGGGTCGTCCCTG-TAGTCGTAATCTCCTCCAAGGAAG 238
Query 246 CAGCTAAACAAGTTCTAAAGTCTCGCGATCTAGAGACATGCTCCCGACCTAAGCTGGTTG 305
|||||||| ||||||| ||| ||| || |||||||| ||| ||||||||||| ||||
Sbjct 239 CAGCTAAAGAAGTTCTCAAGACTCATGACCTAGAGACTTGCACCCGACCTAAGATGGTCA 298
Query 306 CGAA-CGGGTTGTTTACTCGCAACTTCAAAGACATTGCTTTCGCTCAGTATGGTGAGGAC 364
| || ||| |||||| || ||||||||||||||||| ||| |||| ||||| ||||||
Sbjct 299 C-AACCGGTTTGTTTTCTTACAACTTCAAAGACATTGGTTTTACTCAATATGGCGAGGAC 357
Query 365 TGGCGAGAGATGAAAAAGCTCGTGGGGCTTGAGCTCTTCAATCC-AAAGAAGCACAAA-T 422
||||||||||||||||||||||||||||| |||||||| | ||| ||| || || ||| |
Sbjct 358 TGGCGAGAGATGAAAAAGCTCGTGGGGCTCGAGCTCTTTAGTCCGAAAAAA-CA-AAAGT 415
Query 423 -TTTTCAGGTATATCAGAGAGGAAGAGGGTGACTTGCTGGTCAAGAAACTATCCAAATCT 481
|||| ||||| ||||||||||||||| |||||||||||||||||||| | || ||||||
Sbjct 416 CTTTT-AGGTACATCAGAGAGGAAGAGAGTGACTTGCTGGTCAAGAAAATTTCAAAATCT 474
Query 482 TCTCAAACACAAACTTTAGTGGATTTGAGAAAAGCCTTTTTCTCCTTCACCGCGGGTATC 541
||||||||||||| |||||||||| |||||||| |||||||||||||||| |||||
Sbjct 475 ACTCAAACACAAACCCAAGTGGATTTGGGAAAAGCCCTTTTCTCCTTCACCGCCGGTATT 534
Query 542 ATATTTAGAGTCT-CCTTTGGACAGAACTTCCGCGAGTGCGATTTCATCGATATGGACAG 600
|||||||| | | |||||||||| |||||||||||||| ||||| ||||||||||| ||
Sbjct 535 TTATTTAGACT-TGCCTTTGGACAAAACTTCCGCGAGTGTGATTTTATCGATATGGAGAG 593
Query 601 ACTTGAAGAGTTGGTG-CAAGAGTCAGAGACCAACGTATTCAGCTTCGCATTCACTGACT 659
| | |||||| ||||| || ||| |||||||||||||| || ||| |||||||||||||
Sbjct 594 AGTCGAAGAGCTGGTGACA-GAGACAGAGACCAACGTAGGCACCTTGGCATTCACTGACT 652
Query 660 TCTTCCCAACGGGTCTCGGTTGGCTTGTAGACCGGATCTCCGGTCAACATTCGAGGATCG 719
||||||| ||||||||||| |||||| |||||||| |||| ||||| | ||||||||| |
Sbjct 653 TCTTCCCCACGGGTCTCGGATGGCTTATAGACCGGCTCTCTGGTCAGCGTTCGAGGAT-G 711
Query 720 AG-AAAGCCTTTTCAAAACTCACCAAGTTCTTTCAACATGTAATCGATGAGGAGTTGAAG 778
| |||| |||||| ||||||||||| || ||||||||||| || ||||| | || |||
Sbjct 712 AACAAAGTCTTTTCCAAACTCACCAATTTATTTCAACATGTGATTGATGATCATTTAAAG 771
Query 779 ATTGGACAATC-CCAAGATCACTCAAACCTCGTCAGTTCCATGTTGGATATGATCAATAG 837
| || |||| | || |||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct 772 ACTGAACAA-CACCGAGATCACTCAGACCTCATCAGTGCCATGTTGGATATGATCAATAA 830
Query 838 ATCC-ACTGA-ATACGGTTCTTTCAAGATCACTTCTGATCATCTCATAGCAATGATGACG 895
| || || | ||| || |||||||||||||||| |||||||||| || | | ||| ||
Sbjct 831 A-CCTACAAATATA-GGCACTTTCAAGATCACTTCCGATCATCTCAAAGGAGTCATGTCG 888
Query 896 GACATAGTTTTGGG-GGGAGTGAACGCAGGAACAATCACAATGATATGGACGATGACAGA 954
| | ||||| || |||||| ||||| || |||||| ||||||||||||||||||||
Sbjct 889 AATGT-GTTTTTGGCGGGAGTTAACGCCGGGGTAATCACGATGATATGGACGATGACAGA 947
Query 955 GCTAACCAGACATCCAAGAGTGATGAAGAAACTCCGAGAAGAGATTCGAGCAACACTTGG 1014
||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| ||
Sbjct 948 GCTAATTAGACATCCAAGAGTGATGAAGAAACTTCAAGAAGAGATTCGAGCAACACTCGG 1007
Query 1015 ACCCAACAAAGAGAGAATCACAGAAGAAGATCTAGAGAAAGTTGAGTACTTGAAGTTGGT 1074
|||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||
Sbjct 1008 GTCCAACAAAGAGAGAATCACAGAAGAAGATCTACAGAAAGTTGAGTACCTAAAGATGGT 1067
Query 1075 GATCAAAGAAACTTTCAGATTACATCCACCAGGTCCTTTCTTGCTCCCAAGAC-AAGTAA 1133
|||| | ||||| ||||||||||| ||||| | ||| |||||||||||||| || ||
Sbjct 1068 GATCGAGGAAACATTCAGATTACACCCACCTGCTCCAATCTTGCTCCCAAGATTAAC-AA 1126
Query 1134 TGTCCGACAT-AGAGATTCAAGGCTACCACATTCCCAAGAACGCACAT-ATCAAGATCAG 1191
|||||||||| | |||||||||||||| |||||||||| ||| | ||| || ||||||
Sbjct 1127 TGTCCGACATCA-AGATTCAAGGCTACAACATTCCCAAAAACAC-CATGATTGAGATCAA 1184
Query 1192 CACTTACGCCATAGGACGTGATCCCAAATGTTGGACTAATCCTGAAGAATTCAAT-CCTG 1250
|| |||| | ||||||||||||||||||||||||||||| ||||| ||||||| | ||||
Sbjct 1185 CATTTACACGATAGGACGTGATCCCAAATGTTGGACTAACCCTGACGAATTCA-TGCCTG 1243
Query 1251 AGAGGTTTG-CAAATACCTCAATCAACTACAAAGGTCAGCATTACGAGCTTTTACCCTTT 1309
| || ||| ||| ||| || || |||||||| |||||||||| |||||| || ||||||
Sbjct 1244 AAAGATTTTTCAA-TACTTCTATAAACTACAAGGGTCAGCATTTCGAGCTCTTGCCCTTT 1302
Query 1310 GGAGCCGGTCGTAGGAGCTGTCCTGGTATGACTTTGGGAATCACCATTCTTGAGCTAGGC 1369
||||| ||||||||||||||||| || ||| | || ||||||||||||||||||||||||
Sbjct 1303 GGAGCTGGTCGTAGGAGCTGTCCCGGGATGGCCTTAGGAATCACCATTCTTGAGCTAGGC 1362
Query 1370 CTTCTTAA-CATTCTTTACTACTTCGATTGGAGTTTACCCAATGGAATGACCATTAAAGA 1428
|||||||| | ||||||| | |||| |||||||||| ||| |||||||||||||| |||
Sbjct 1363 CTTCTTAATC-TTCTTTATTTCTTCAATTGGAGTTTGCCCGATGGAATGACCATTGCAGA 1421
Query 1429 CATTGACATGGAAGAAGATGGAGCTTTGACCATCGCCAAGAAAGTCCCTCTTGAGCTCAT 1488
|||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||| |
Sbjct 1422 TATTGACATGGAAGAAGTTGGAGCTTTAAACATCGCCAAGAAAATTCCTCTTGAGCTCGT 1481
Query 1489 ACCTACGCTCCCAGCATCA 1507
||| || || ||| |||||
Sbjct 1482 ACCAACTCTTCCATCATCA 1500
> Ahg898261 jgi|Araly1|898261|Al_scaffold_0005_2227
Length=1413
Score = 1339 bits (725), Expect = 0.0
Identities = 1053/1211 (87%), Gaps = 23/1211 (2%)
Strand=Plus/Plus
Query 9 GTCTATCTTACTATGTTTCTTCTTCCTTTTCCCTCTCCTTTTAACCCTCTTTAAGAAGCT 68
||||||||| ||| ||||| ||||||||||||||||| |||| | ||||||||| |||||
Sbjct 3 GTCTATCTTCCTAGGTTTCCTCTTCCTTTTCCCTCTCTTTTTGATCCTCTTTAAAAAGCT 62
Query 69 TTTACCTTCGAAATGGAAGCTTCCTCCCGGACCTACAGGTCTTCCGATCATCGGAAACTT 128
||||||||||||| ||||||||||||| ||||||| |||||| |||||||| ||||||||
Sbjct 63 TTTACCTTCGAAAAGGAAGCTTCCTCCAGGACCTAGAGGTCTCCCGATCATAGGAAACTT 122
Query 129 GCACCAAGCTTGGAAGATTGCTTCATAGT-TCTTTTCACAAGCTCTCTTTAGAACATGGA 187
||||| | |||||||||| ||||| ||| | ||||||||||||||||||||||||||||
Sbjct 123 GCACC-ATCTTGGAAGATCACTTCACAGTGT-TTTTCACAAGCTCTCTTTAGAACATGGA 180
Query 188 CCAGTGATGCTTCTCCGTTTCGGGGTCGTCCC-GATGGTTGT-TATCTCTTCCAAGGAAG 245
|||||||||||||||| |||||| || ||||| | |||| || | |||||||||| |||
Sbjct 181 CCAGTGATGCTTCTCCATTTCGGAGTTGTCCCTG-TGGTCGTCT-TCTCTTCCAAAGAAA 238
Query 246 CAGCTAAACAAGTTCT-AAAGTCTCGCGATCTAGAGACATGCTCCCGACCTAAGCTGGTT 304
|||||||| ||||||| ||| ||| || |||||||| ||| ||||||||||||||||
Sbjct 239 CAGCTAAAGAAGTTCTCAAAA-CTCATGACCTAGAGACTTGCACCCGACCTAAGCTGGTG 297
Query 305 GCGAACGGGTTGTTTACTCGCAACTTCAAAGACATTGCTTTCGCTCAGTATGGTGAGGAC 364
||||| ||||||||| ||||||||||||||||||||| |||| ||||||| ||||| |||
Sbjct 298 GCGAATGGGTTGTTTTCTCGCAACTTCAAAGACATTGGTTTCACTCAGTACGGTGAAGAC 357
Query 365 TGGCGAGAGATGAAAAAGCTCGTGGGGCTTGAGCTCTTCAATCC-AAAGAAGCACAAATT 423
|||| ||||||||||||||| |||||||| |||||||| | ||| ||| ||||| ||| |
Sbjct 358 TGGCAAGAGATGAAAAAGCTGGTGGGGCTCGAGCTCTTTAGTCCGAAA-AAGCA-AAAGT 415
Query 424 -TTTCAGGTATATCAGAGAGGAAGAGGGTGACTTGCTGGTCAAGAAACTATCCAAATCTT 482
|||||||||||||||||| ||||| || |||||||||||||||||| |||| |||||
Sbjct 416 CTTTCAGGTATATCAGAGAAGAAGAAGGAGACTTGCTGGTCAAGAAAATATCAAAATCCG 475
Query 483 CTCAAACACAAACTTTAGTGGATTTGAGAAAAGCCTTTTTCTCCTTCACCGCGGGTATCA 542
||||||||||||| || | |||||||||||||||| ||||||||||||||| |||| ||
Sbjct 476 CTCAAACACAAACCCTAATAGATTTGAGAAAAGCCTCTTTCTCCTTCACCGCTGGTACCA 535
Query 543 TATTTAGAGTCTCCTTTGGACAGAACTTCCGCGAGTGCGATTTCATCGATATGGACAGAC 602
| |||||| | |||||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct 536 TCTTTAGACTAGCCTTTGGACAGAACTTCCACGAGTGTGATTTCATCGATATGGGCAGAC 595
Query 603 TTGAAGAGTTGGTGCAAGAGTCAGAGACCAACGTATT-CAGCTTCGCATTCACTGACTTC 661
|||||||| |||||| |||| | || |||||||| || || ||| ||| |||||||||||
Sbjct 596 TTGAAGAGCTGGTGCTAGAGGCGGAAACCAACGT-TTGCATCTTGGCACTCACTGACTTC 654
Query 662 TT-CCCAACGGGTCTCGGTTGGCTTGTAGACCGGATCTCCGGTCAACATTCGAGGATCGA 720
|| |||| ||||||| |||||||||| ||||||||| || |||| |||||||||||| ||
Sbjct 655 TTACCCA-CGGGTCTTGGTTGGCTTGCAGACCGGATATCTGGTCGACATTCGAGGAT-GA 712
Query 721 G-AAAGCCTTTTCAAAACTCACCAAGTTCTTTCAACATGTAATCGATGAGGAGTTGAAGA 779
||||||||||||||||||||||| || ||||||||||| ||||||||| | || ||||
Sbjct 713 ACAAAGCCTTTTCAAAACTCACCAATTTATTTCAACATGTGATCGATGAGCAATTAAAGA 772
Query 780 TTGGACAA-TCCCAAGATCACTCAAACCTCGTCAGTTCCATGTTGGATATGATCAATAGA 838
|||||||| ||| ||||||| || |||||||||||| |||||||||||||||||||||||
Sbjct 773 TTGGACAACTCC-AAGATCATTCCAACCTCGTCAGTGCCATGTTGGATATGATCAATAGA 831
Query 839 TCCACTGAATACGGTTCTTTCAAGATCACTTCTGATCATCTCATAGCAATGATGACGGAC 898
|| || ||| | |||||||||| |||||||| | ||||||||||| |||||| |||
Sbjct 832 CCCTCTAAATTCAGTTCTTTCAATATCACTTCCAACCATCTCATAGCCATGATGTCGGGT 891
Query 899 ATAGTTTTGGGGGGAGTGAACGCAGGAACAATCACAATGATATGGACGATGACAGAGCTA 958
| ||||||| ||||||||||| ||||||||||| ||| |||||| |||||||| |||
Sbjct 892 GTGGTTTTGGCCGGAGTGAACGCGGGAACAATCACGATGGTATGGATAATGACAGAACTA 951
Query 959 ACCAGACATCCAAGAGTGATGAAGAAACTCCGAGAAGAGATTCGAGCAACACTTGGACCC 1018
| |||||||||||| |||||||| ||||||| || |||||||||| ||||||| ||| ||
Sbjct 952 ATCAGACATCCAAGGGTGATGAAAAAACTCCAAGCAGAGATTCGAACAACACTCGGATCC 1011
Query 1019 AACAAAGAGAGAATCACAGAAGAAGATCTAGAGAAAGTTGAGTACTTGAAG-TTGGTGAT 1077
|||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||||
Sbjct 1012 AACAAAGAGAGAATCACAGAAGAAGATCTACAGAAAGTCGAGTACTTGAAGCTTG-TGAT 1070
Query 1078 CAAAGAAACTTTCAGATTACATCCACCAGGTCCTTTCTTGCTCCCAAGACAAGTAATGTC 1137
||||||||| |||||||||||||||||| |||| ||||||| |||||| || ||||||
Sbjct 1071 CAAAGAAACATTCAGATTACATCCACCATCTCCTCTCTTGCTACCAAGAGAAACAATGTC 1130
Query 1138 CGACATAGAGATTCAAGGCTACCACATTCCCAAGAACGCACATATCAAGATCAGCACTTA 1197
||| || |||||||||||||||||||||||||||||||| | ||||| ||||| ||||||
Sbjct 1131 CGATATCGAGATTCAAGGCTACCACATTCCCAAGAACGCCCTTATCAGGATCAACACTTA 1190
Query 1198 CGCCATAGGAC 1208
| | |||||||
Sbjct 1191 CACGATAGGAC 1201
Score = 287 bits (155), Expect = 2e-76
Identities = 190/207 (92%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 1239 AATTCAATCCTGAGAGGTTTGCAAATACCTCAATCAACTACAAAGGTCAGCATTACGAGC 1298
|||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||||
Sbjct 1202 AATTCAATCCTGAGAGGTTTTCGAATACCTCGATCAACTACAAAGGTCAGGATTACGAGC 1261
Query 1299 TTTTACCCTTTGGAGCCGGTCGTAGGAGCTGTCCTGGTATG-ACTTTGGGAATCACCATT 1357
| || || |||||||| || ||||| ||||||||||||||| || |||||||||||||||
Sbjct 1262 TCTTGCCATTTGGAGCAGGCCGTAGAAGCTGTCCTGGTATGAAC-TTGGGAATCACCATT 1320
Query 1358 CTTGAGCTAGGCCTTCTTAACATTCTTTACTACTTCGATTGGAGTTTACCCAATGGAATG 1417
||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 1321 CTTGAGCTAGGCCTTCTTAACATTCTTTACTTCTTTGATTGGAGTTTGCCCAATGGAATG 1380
Query 1418 ACCATTAAAGACATTGACATGGAAGAA 1444
|||||| |||||||||||||||| |||
Sbjct 1381 ACCATTGAAGACATTGACATGGAGGAA 1407
> Ahg323127 jgi|Araly1|323127|fgenesh1_pm.C_scaffold_5000671
Length=1500
Score = 1024 bits (554), Expect = 0.0
Identities = 1212/1521 (80%), Gaps = 80/1521 (5%)
Strand=Plus/Plus
Query 9 GTCTATCTTACTATGTTTCTTCTTCCTTTTCCCTCTCCT-TTTAACCCTCTTTAAGAA-G 66
|||| |||| || |||||| |||| || |||| ||| || |||| | ||||||| || |
Sbjct 3 GTCTGTCTTCCTTTGTTTCCTCTTACTCTTCCTTCT-CTCTTTAGTCTTCTTTAA-AAGG 60
Query 67 CTTTTACCTTCGAAATGG-AAGCTTCCTCCCGGACCTACAGGTCTTCCGATCATCGGAAA 125
|||||||| |||||| || ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 61 CTTTTACCGTCGAAA-GGAAAGCTTCCTCCTGGACCTACGGGTCTACCGATCATCGGAAA 119
Query 126 CTTGCACCAAGCTTGG-AAGATTGCTTCA-TAGTTCTTTTCACAAGCTCTCTTTAGAACA 183
||| |||| ||||||| ||| || ||||| | ||||||||||| |||| |||| |
Sbjct 120 CTTACACC-AGCTTGGAAAGGTT-CTTCACCA-ATCTTTTCACAAAATCTCCCAAGAATA 176
Query 184 TGGACCAGTGATGCTTCTCCGTTTCGGGGTCGTCCCGA-TGGTTGTTATCTCTTCCAAGG 242
|||||||||| ||||||||| ||||||||| ||||| | || | ||| |||| ||||| |
Sbjct 177 TGGACCAGTGGTGCTTCTCCATTTCGGGGTAGTCCC-AGTGATCGTTGTCTCCTCCAAAG 235
Query 243 AAGCAGCTAAACAAGTTCT-AAAGTCTCGCGATCTAGAGACATGCT-CCCGACC-TAAGC 299
||| |||| | |||| || ||| ||| ||||| ||||| || | |||||| || |
Sbjct 236 AAGGAGCTGAGGAAGTGCTCAAA-ACTCATGATCTTGAGACTTG-TAGCCGACCGAAAAC 293
Query 300 TGGTTGCGAACGGGTTGTTTACTCGCAACTTCAAAGACATTGCTTTCGCTCAGTATGGTG 359
| ||| || ||||||||| |||||| |||||||||| |||||||| | |||||
Sbjct 294 -AGCCGCGGTTGGCTTGTTTACTTACAACTTTAAAGACATTGGTTTCGCTCCCTTTGGTG 352
Query 360 AGGACTGGCGAGAGATGA--AAAAGCTCGTGGGGCTTGAGCTCTTCA-ATCCAAAGAAGC 416
|||||||| ||||||||| |||| || |||||||||||| | | ||| || |
Sbjct 353 AGGACTGGAGAGAGATGAGGAAAA--TCACAATGCTTGAGCTCTTTAGCTTGAAA-AAAC 409
Query 417 ACAAAT-TTTTCAGGTATATCAGAGAGGAAGAGGGTGACTTGCTGGTCAAGAAACTATCC 475
||| | |||| ||||| || ||||| |||||| |||| ||| ||||||||||| |||||
Sbjct 410 TCAAGTCTTTT-AGGTACATTAGAGAAGAAGAGAGTGAATTGTTGGTCAAGAAATTATCC 468
Query 476 AAATCTTCT--C-AAACACAAA-CT--TTAGTGGATTTGAGAAAAGCCTTTTTCTCCTTC 529
|||||| || | | || ||| || ||||| ||||||| |||| |||||||||||||
Sbjct 469 AAATCTGCTGACGAGTCAGAAACCTCATTAGTTAATTTGAGGAAAGTCTTTTTCTCCTTC 528
Query 530 ACCGCGGGTATCATATT-TAGAGTCT-CCTTTGGACAGAACTTCCGCGAGTGCGATTTCA 587
|| || | ||||| || |||| | | |||||||||||||||||| | || |||||||
Sbjct 529 ACAGCAAGCATCAT-TTGTAGACT-TGCCTTTGGACAGAACTTCCACCAGCGCGATTTTG 586
Query 588 TCGATATGGACAGACTTGAAGAGTTGGTGCAAGAGTCAGAGACCAACGTATTCAGCTTCG 647
| |||||||| ||| | |||||||||||| ||||||||||||||| | || ||| |
Sbjct 587 TTGATATGGAGAGAGTGGAAGAGTTGGTGGTTGAGTCAGAGACCAACCTCGGCACCTTGG 646
Query 648 CATTCACTGACTTCTTCCCAACGGGTCTCGGTTGGCTTGTAGACCGGATCTCCGGTCAAC 707
| ||| | || ||||| || | || || ||||| |||||||||| |||||||| |
Sbjct 647 CGTTCGCCGATTTCTT-CC--CTGG---AGGATGGCTCATAGACCGGATATCCGGTCATC 700
Query 708 ATTCGA-GGATCG-AGAAAGCCTTTTCAAAACTCACCAAGTTCTTTCAACATGTAATCGA 765
|||||| || | | | ||||||||||| |||||| |||| |||||| |||||||||||||
Sbjct 701 ATTCGACGG-T-GCACAAAGCCTTTTCCAAACTCGCCAATTTCTTTAAACATGTAATCGA 758
Query 766 TGAGGAGTTGAAGATTGGACAATCCCAAGATCACTCAAACCTCGTCAGT-TCCATGTTGG 824
||| | ||||||| ||||| | ||||||||||| || |||| ||| | ||||||||
Sbjct 759 TGATCATTTGAAGACTGGAC---CTCAAGATCACTCGGACATCGTTAGTGT-CATGTTGG 814
Query 825 ATATGATCAATAGATCC-ACTGAA-TACGGTTCTTTC-AAGATCACTTCTGATCATCTCA 881
|||||||||||| | || || || | || ||||||| ||| ||||| ||| |||||||
Sbjct 815 ATATGATCAATA-AACCAACAAAAGT-CGATTCTTTCAAAG-TCACTGATGACCATCTCA 871
Query 882 TAGCAATGATGACGGACATAG-TTTTGGGGGGAGTGAACGCAGGAACAATCACAATGATA 940
|| | | ||| | || || | |||||| |||||| | | ||| | ||||| || ||
Sbjct 872 AAGGAGTCATGTCTGATAT-GTTTTTGGCTGGAGTGGATGGGGGAGCCATCACGTTGTTA 930
Query 941 TGGACGATGACAGAGCTAACCAGACATCCAAGAGTGATGAAGAAACTCCGAGAAGAGATT 1000
||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||
Sbjct 931 TGGACAATGACAGAGCTAAGCAGACATCCGAGAGTGATGAAGAAACTCCAAGAAGAGATA 990
Query 1001 CGAGCAACACTTGGACCCAACAAAGAGAGAATCACAGAAGAAGATCTAGAGAAAGTTGAG 1060
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 991 CGAGCAACTCTTGGACCCAACAAAGAGAGAATCACAGAAGAAGTTCTAGAAAAAGTTGAG 1050
Query 1061 TACTTGAAGTTGGTGATCAAAGAAACTTTCAGATTACATCCACCAGGTCCTTTCTTGCTC 1120
|||||||| ||||||||| ||||| ||||||||||| ||||||| |||| ||||||||
Sbjct 1051 TACTTGAAACTGGTGATCATGGAAACATTCAGATTACACCCACCAGCTCCTCTCTTGCTC 1110
Query 1121 CCAAGAC-AAGTAATGTCCGACAT-AGAGATTCAAGGCTACCACATTCCCAAGAACGCAC 1178
||||||| || || || | ||||| | |||||||||||||| |||||||||||||| | |
Sbjct 1111 CCAAGACTAACTA-TGGCTGACATCA-AGATTCAAGGCTACAACATTCCCAAGAACAC-C 1167
Query 1179 AT-ATCAAGATCAGCACTTACGCCATAGGACGTGATCCCAAATGTTGGACTAATCCT-GA 1236
|| ||| | |||| ||| ||| | |||||| ||||||| |||| |||| ||||| |
Sbjct 1168 ATGATCCACATCAACACGTACACGATAGGATGTGATCCTAAATACTGGAAAAATCCCAGT 1227
Query 1237 AGAATTCAATCCT-GAGAGGTTTG-CAAATA-CCTCAATC-AACTACAAAGGTCAGCATT 1292
|| |||| ||| ||||||||| | | || ||| | || || || || || || ||||
Sbjct 1228 -GAGTTCA-TCCCCGAGAGGTTTCTCGA-TAACCTTA-TCGAA-TATAACGGCCAACATT 1282
Query 1293 ACGAGCTTTTACCCTTTGGAGCCGGTCGTAGGAGCTGTCCTGGTATGACTTTGGGAATCA 1352
||||| || || |||||| |||| ||||||| ||||||||| ||||| ||| ||||
Sbjct 1283 TTGAGCTATTGCCGTTTGGATCCGGACGTAGGATCTGTCCTGGAATGACCACGGGGATCA 1342
Query 1353 CCATTCTT-GAGCTAGGCCTTCTTAACATTCTTTACTACTTCGATTGGAGTTTACCCAAT 1411
|||| | | ||||| |||||||||||| ||||||||| ||||||||||||||| ||||||
Sbjct 1343 CCAT-CGTCGAGCTCGGCCTTCTTAACCTTCTTTACTTCTTCGATTGGAGTTTGCCCAAT 1401
Query 1412 GGAATGACCATTAAAGACATTGACATGGAAGAAGATGGAGCTTT-GACCATCGCCAAGAA 1470
|||||||||| | |||||||||||||||||||||||||| ||| | | || ||||||||
Sbjct 1402 GGAATGACCACTGCAGACATTGACATGGAAGAAGATGGAGGTTTCG-CTATGGCCAAGAA 1460
Query 1471 AGTCCCTCTTGAGCTCATACC 1491
||||||||||| |||||||||
Sbjct 1461 AGTCCCTCTTGTGCTCATACC 1481
> Ahg938228 jgi|Araly1|938228|scaffold_502419.1
Length=1537
Score = 1022 bits (553), Expect = 0.0
Identities = 1217/1527 (80%), Gaps = 88/1527 (6%)
Strand=Plus/Plus
Query 6 AAA-GTCTATCTTACTATGTTTCTTCTTCCT-TTTCC-CTCTCCTTTTAACCCTCTTTAA 62
||| ||||||||| || |||||| |||| || || || |||||| || | | |||| ||
Sbjct 19 AAATGTCTATCTTCCTTTGTTTCCTCTTACTCTTGCCTCTCTCC-ATT-ATCTTCTTAAA 76
Query 63 GAAGCTTTTACCTTCGAAATGGAAGCTTCCTCCCGGACCTACA-GGTCTTCCGATCATCG 121
||||||||||| || ||| ||||||||||||| ||||||| | ||||||||||||||||
Sbjct 77 AAAGCTTTTACCGTCAAAAGGGAAGCTTCCTCCGGGACCTA-AGGGTCTTCCGATCATCG 135
Query 122 GAAACTTGCACCAAGCTTGGAAGATTGCTTCATAGTTCTTTTCACAAGCTCTCTTTAGAA 181
|||||||||||| ||||||||||||| ||||| | ||| ||||||| ||||| | ||
Sbjct 136 GAAACTTGCACC-AGCTTGGAAGATTTCTTCACAAATCTCTTCACAAAATCTCTCAAAAA 194
Query 182 CATGGACCAGTGATGCTTCTCCGTTTCGGGGTCGTCCC-GATGGTTGTTATCTCTTCCAA 240
||||||| ||||||||||||| ||||||||| ||||| | || | || ||||||||||
Sbjct 195 TATGGACCGGTGATGCTTCTCCATTTCGGGGTAGTCCCTG-TGATCATTGTCTCTTCCAA 253
Query 241 GGAAGCAGCTAAACAAGTTCTAAAGTCTCGCGATCTAGAGACATGCT-CCCGACCTAAG- 298
|||| |||| | |||| || ||| ||| ||||| ||||| || | ||||||||||
Sbjct 254 AGAAGGAGCTGAGGAAGTGCTCAAGACTCATGATCTTGAGACTTG-TAGCCGACCTAAGA 312
Query 299 CTGGTTGCGAACGGGTTGTTTACTCGCAACTTCAAAGACATTGCTTTCGCTCAGTATGGT 358
| ||| | || ||||||||||||| |||||||||||| |||| ||| |||| |||||||
Sbjct 313 C-GGTGGGGAGCGGGTTGTTTACTTACAACTTCAAAGATATTGGTTTTGCTCCGTATGGT 371
Query 359 GAGGACTGGCGAGAGATGA--AAAAGCTCGTGGGGCTTGAGCTCTTCA-ATCCAAAGAAG 415
||| ||||||||||||||| |||| ||| || ||| |||||||| | ||||| |||
Sbjct 372 GAGAACTGGCGAGAGATGAGGAAAA--TCGCGGTGCTCGAGCTCTTTAGCCCCAAA-AAG 428
Query 416 CACAAATTTTTCAGGTATATCAGAGAGGAAGAGGGTGACTTGCTGGTCAAGAAACTATCC 475
| || | |||||||||||| |||||||||||| || || |||||||| ||| |
Sbjct 429 CTTAAGTCTTTCAGGTATATTAGAGAGGAAGAGAACGAGTTTTTGGTCAAGCGGGTAT-C 487
Query 476 AA-ATCT--TC-TCAAACACAAACTT--T-AGTGGATTTGAGAAAAG-CCTTTTTCTCCT 527
|| ||| || | | |||| ||||| | ||| ||||||| |||| | ||||| |||
Sbjct 488 AAGTTCTGCTCGTGAGACACCAACTTCATCAGTTAATTTGAGGAAAGTCATTTTT-ACCT 546
Query 528 TCACCGCGGGTATCATATT-TAGAGTCT-CCTTTGGACAGAACTTCCGCGAGTGCGATTT 585
| | || | ||||| || |||| | | | |||||||| || || | ||||||||
Sbjct 547 TTGCGGCAAGCATCAT-TTGTAGACT-TGCTTTTGGACA-AAATT--TC---TGCGATTT 598
Query 586 CATCGATATGGACAGACTTGAAGAGTTGGTGCAAGAGTCAGAGACCAACGT--ATTCAGC 643
|||||||||| | | | ||||||||||||| ||||| ||| ||||| | ||| |
Sbjct 599 TGTCGATATGGAGACAGTGGAAGAGTTGGTGCTTGAGTCGGAGTCCAACCTCGGTTC--C 656
Query 644 TTCGCATTCACTGACTTCTTCCCAACGGGTCTCGGTTGGCTTGTAGACCGGATCTCCGGT 703
|| || || |||||||||| || | | || ||| | |||| ||||||||||||
Sbjct 657 TTGGCTTTTGCTGACTTCTT----ACCTG-C-AGGGTGGATCATAGATCGGATCTCCGGT 710
Query 704 CAACATTCGAGGATCG-AGAAAGCCTTTTCAAAACTCACCAAGTTCTTTCAACATGTAAT 762
|| ||||| ||| | | | ||||||||| | ||||||||||| |||||| ||| ||| ||
Sbjct 711 CAGCATTCCAGGGT-GAACAAAGCCTTTGCCAAACTCACCAATTTCTTTGAACTTGTGAT 769
Query 763 CGATGAGGAGTTGAAGATTGG-ACAATCCCAAGATCACTCAAACCTCGTCAGT-TCCATG 820
||||| | ||||||| ||| | ||| ||||||||||||| || || ||||| | ||||
Sbjct 770 TGATGATCATTTGAAGAGTGGAAAAAT-CCAAGATCACTCAGACATCATCAGTGT-CATG 827
Query 821 TTGGATATGATCAATAGATCCACTGAA-TACGGTTCTT-TCAAGATCACTTCTGATCATC 878
|||||||||||||||| | ||||| || | |||||||| | ||| |||| ||| ||||
Sbjct 828 TTGGATATGATCAATAAACCCACTAAAGT-CGGTTCTTATAAAG-TCACCGATGACCATC 885
Query 879 TCATAGCAATGATGACGGACATAG-TTTTGGGGGGAGTGAACGCAGGAACAATCACAATG 937
||| || | | ||| |||| | | |||||| ||||||||||| ||| | |||||||||
Sbjct 886 TCAAAGGAGTTATGTCGGATGT-GTTTTTGGCTGGAGTGAACGCGGGATCCATCACAATG 944
Query 938 ATATGGACGATGACAGAGCTAACCAGACATCCAAGAGTGATGAAGAAACTCCGAGAAGAG 997
|||||||||||||||||||||| ||| ||||| ||||||||||| ||||| | |||||||
Sbjct 945 ATATGGACGATGACAGAGCTAAGCAGGCATCCGAGAGTGATGAAAAAACTTCAAGAAGAG 1004
Query 998 ATTCGAGCAACACTTGGACCCAACAAAGAGAGAATCACAGAAGAAGATCTAGAGAAAGTT 1057
||||||||||| || |||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1005 ATTCGAGCAACGCTCGGACCCAACAAAGAGAAAATCACAGAAGAAGACCTAGAGAAAGTT 1064
Query 1058 GAGTACTTGAAGTTGGTGATCAAAGAAACTTTCAGATTACATCCACCAGG-TCCTTTCTT 1116
|||||||||||| | |||||| | ||| | ||||||||||| ||||| || |||| ||||
Sbjct 1065 GAGTACTTGAAGCTCGTGATCGAGGAAGCATTCAGATTACACCCACC-GGCTCCTCTCTT 1123
Query 1117 GCTCCCAAGAC-AAGTAATGTCCGACAT-AGAGATTCAAGGCTACCACATTCCCAAGAAC 1174
||||||||||| || |||||| ||||| | |||||||||||||| ||||||||||||||
Sbjct 1124 GCTCCCAAGACTAAC-AATGTCGGACATCA-AGATTCAAGGCTACAACATTCCCAAGAAC 1181
Query 1175 GCACAT-ATC-AAGATCAGCACTTACGCCATAGGACGTGATCCCAAATGTTGGACT-AAT 1231
| ||| ||| ||| ||| ||||||| | || ||||||||||||||| ||||| ||
Sbjct 1182 AC-CATGATCCAAG-TCAACACTTACACGATTGGACGTGATCCCAAAACCTGGACAGAAC 1239
Query 1232 CCTGAAGAATTCAATCCT-GAGAGGTTTG-CAAATA-CCTCAATC-AACTACAAAGGTCA 1287
|| || || |||| ||| |||||||||| | | || || | ||| || ||||| |||||
Sbjct 1240 CC-GACGAGTTCA-TCCCCGAGAGGTTTGTCGA-TAACC-CTATCGAA-TACAAGGGTCA 1294
Query 1288 GCA-TTACGAGCTTTTACCCTTTGGAGCCGGTCGTAGGAGCTGTCCTGGTATGACTTTGG 1346
||| || ||||| || || ||||||||||| ||||||| |||||| || ||| | ||
Sbjct 1295 GCACTTT-GAGCTATTGCCGTTTGGAGCCGGACGTAGGATCTGTCCCGGGATGGCCACGG 1353
Query 1347 GAATCACCATTCTT-GAGCTAGGCCTTCTTAACATTCTTTACTACTTCGATTGGAGTTTA 1405
| || ||||| | | ||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct 1354 GGATTACCAT-CGTCGAGCTCGGCCTTCTTAACCTTCTTTACTTCTTCGATTGGAGTTTG 1412
Query 1406 CCCAATGGAATGACCATTAAAGACATTGACATGGAAGAAGATGGAGCTTT-GACCATCGC 1464
|| ||||||||||||| |||||| ||||||||||||||||| |||||||| | | |||||
Sbjct 1413 CCTAATGGAATGACCACTAAAGATATTGACATGGAAGAAGACGGAGCTTTTGTC-ATCGC 1471
Query 1465 CAAGAAAGTCCCTCTTGAGCTCATACC 1491
||||||| || ||||||||||| ||||
Sbjct 1472 CAAGAAAATCTCTCTTGAGCTCGTACC 1498
> Ahg484387 jgi|Araly1|484387|fgenesh2_kg.5__379__AT3G26190.1
Length=1512
Score = 946 bits (512), Expect = 0.0
Identities = 1192/1515 (79%), Gaps = 68/1515 (4%)
Strand=Plus/Plus
Query 6 AAA-GTCTATCTTACTATGTTTCTTCTTCCTTTTCCCTCTCCTTT-TAACCCTCTTTAAG 63
||| ||| ||||| || |||||| || | || || ||||| |||| | ||| |||
Sbjct 1 AAATGTCGATCTTTCTCTGTTTCCTCCTGCTCTTACCTCT-CTTTCTTGTTTTCTACAAG 59
Query 64 AAGCTTTTACCTTCGAAATGGAAGCTTCCTCCCGGACCTACAGGTCTTCCGATCATCGGA 123
| ||||| ||| || ||| ||||||||||||| ||||||| |||||||||||||||||||
Sbjct 60 AGGCTTTCACCGTCAAAAGGGAAGCTTCCTCCGGGACCTATAGGTCTTCCGATCATCGGA 119
Query 124 AACTTGCACCAAGCTTGGAAGAT-TGCTTCATAGTTCTTTTCACAAGCTCTCTTTAGAAC 182
|||||||||||| ||||||| || | ||||| || |||||||| || ||||| ||
Sbjct 120 AACTTGCACCAA-CTTGGAAAATCT-CTTCACAGATCTTTTCATAAACTCTCCCAAGTGT 177
Query 183 ATGGACCAGTGATGCTTCTCCGTTTCGGGGTCGTCCC-GATGGTTGT-TATCTCTTCCAA 240
||||||| |||||| |||| |||||||| || ||||| | |||| || | ||||| | ||
Sbjct 178 ATGGACCCGTGATGTTTCTTCGTTTCGGTGTGGTCCCTG-TGGTAGTGT-TCTCTACAAA 235
Query 241 GGAAGCAGCTAAACAAGTTCTAAAGTCTCGCGATCTAGAGACATGCT-CCCGACCTAAGC 299
||||| || || ||||| ||||| ||| ||||| ||||| || | ||||||| ||||
Sbjct 236 AGAAGCTGCCGAAGAAGTTTTAAAGACTCATGATCTCGAGACTTG-TACCCGACCAAAGC 294
Query 300 TGGT-TGCGAACGGGTTGTTTACTCGCAACTTCAAAGACATTG-CTTTCGCTCAGTATGG 357
| | ||||| |||||||||| || ||||| |||||| |||| |||| || ||||| ||
Sbjct 295 TA-TCTGCGACCGGGTTGTTTTCTTACAACTACAAAGATATTGGCTTT-GCACAGTACGG 352
Query 358 TGAGGACTGGCGAGAGATGAAAAAGCTCGTGGGGCTTGAGCTCTTCAA-TCCAAAGAAGC 416
||| |||||| ||||||||| |||||| | | ||| |||||||| | || ||| |||
Sbjct 353 TGAAGACTGGAGAGAGATGAGAAAGCTTGCGATGCTCGAGCTCTTTAGCTCAAAA-AAGT 411
Query 417 ACAAATT-TTTCAGGTATATCAGAGAGGAAGAGGGTGACTTGCTGGTCAAGAAACTATCC 475
||| |||||||||||| ||||| |||||| |||| ||||| ||||||||| | ||
Sbjct 412 T-AAAGGCTTTCAGGTATATTAGAGAAGAAGAGAGTGAATTGCTAGTCAAGAAAGTCTCG 470
Query 476 AAATCTTCTCAAACACAAACTTTAGTGGATTTGAGAAAAGC-CTTTTTCTCCT-TCACCG 533
| ||| |||||||||||||||| |||||||||||||| || ||||| ||| | | ||||
Sbjct 471 GACTCTGCTCAAACACAAACTTTGGTGGATTTGAGAAAGGCTCTTTT-CTCTTAT-ACCG 528
Query 534 CGGGTATCATATTTAGAGTCTCCTTTGGACAGAACTTCCGCGAGTGCGATTTCATCGATA 593
| ||||| ||| |||| || | |||||||||||||||| ||||||||||| ||||||
Sbjct 529 CTAGTATCGTATGTAGACTCGCTTTTGGACAGAACTTCCATGAGTGCGATTTTGTCGATA 588
Query 594 TGGACAGACTTGAAGAG-TTGGTGCAAGAGTCAGAGACCAA-CGTAT-TCAGCTTCGCAT 650
|||| | | |||||||| ||| ||| ||||| |||||||| | | ||| |||||||
Sbjct 589 TGGATAAAGTTGAAGAGCTTG-TGCTTGAGTCTGAGACCAATCTTGGCTCA--TTCGCAT 645
Query 651 TCACTGACTTCTTCCCAACGGGTCTCGGTTGG-CT-TGTAGACCGGATCTCCGGTCAACA 708
||| |||||||||||| | ||||| || ||| || | | || ||||| |||||||||||
Sbjct 646 TCATTGACTTCTTCCCTGCCGGTCTTGGGTGGGCTAT-T-GATCGGATATCCGGTCAACA 703
Query 709 TTCGAGGAT-CGAGAAAGCCTTTTCAAAACTCACCAAGTTCTTTCAACATGTAATCGATG 767
||||||| | | | ||||||||| | | ||| | || |||||||||||||| |||||||
Sbjct 704 TTCGAGGTTGC-ACAAAGCCTTTGCTAGACTAAGTAATTTCTTTCAACATGTGATCGATG 762
Query 768 AGGAGTTGAAGATTGGACAATCCCAAGATCACTCAAACCTCGTCAGT-TCCATGTTGGAT 826
| | |||||| ||| ||||| |||||||| ||| || || | || || |||||||||
Sbjct 763 ATCACTTGAAGCCTGGGCAATCTCAAGATCATTCAGACATCATTGGTGTC-ATGTTGGAT 821
Query 827 ATGATCAATAGATCCA-CTGAA-TACGGTTC-TTTCAAGATCACTTCTGATCATCTCATA 883
|||||||||| | | | || | ||| || ||| ||| |||| | ||||||||| | |
Sbjct 822 ATGATCAATAAAGAGAGCA-AAGT-CGGCTCCTTTAAAG-TCACCTATGATCATCTAAAA 878
Query 884 GCAATGATGACGGACATAGTTTTGGGGGGAGTGAACGCAGGAACAATCACAATGATATGG 943
| | | ||| |||| || |||||| ||||||||||||||| | |||||| ||||||||
Sbjct 879 GGAGTCATGTCGGATGTATTTTTGGCCGGAGTGAACGCAGGAGCGATCACATTGATATGG 938
Query 944 ACGATGACAGAGCTAACCAGACATCCAAGAGTGATGAAGAAACTCCGAGAAGAGATTCGA 1003
||||||| ||| |||| |||||||| ||||||||||||||||| | | |||||||||||
Sbjct 939 GCGATGACCGAGTTAACAAGACATCCGAGAGTGATGAAGAAACTTCAACAAGAGATTCGA 998
Query 1004 GCAACACTTGGACCCAACAAAGAGAGAATCACAGAAG-AAGATCTAGAGAAAGTTGAGTA 1062
| || ||| ||| ||||||||| | |||||| || | ||||||| || |||||| | ||
Sbjct 999 GAAATACTCGGAGACAACAAAGAAAAAATCACGGA-GCAAGATCTCGAAAAAGTTCACTA 1057
Query 1063 CTTGAAG-TTGGTGATCAAAGAAACTTTCAGATTACATCCACCAGGTCCTTTCTTGCTCC 1121
| |||| ||| ||||| ||||||| ||| || |||| ||||| | |||| |||||||||
Sbjct 1058 CCTGAAACTTG-TGATCCAAGAAACATTCCGACTACACCCACCCGCTCCTCTCTTGCTCC 1116
Query 1122 CAAGACA-AGTAATGTCCGACAT-AGAGATTCAAGGCTACCACATTCCCAAGAACGCACA 1179
||||| | | |||||| || | | |||||| ||| ||| |||||||||| ||| || |
Sbjct 1117 CAAGAGAGAC-AATGTCTGATGTCA-AGATTCTAGGTTACGACATTCCCAAAAACACA-A 1173
Query 1180 T-ATCAAGATCAGCACTTACGCCATAGGACGTGATCCCAAATGTTGGACTAATCCTGAA- 1237
| ||| |||||| ||||||||| ||||||||||||||||| || ||||| || ||| ||
Sbjct 1174 TGATCGAGATCAACACTTACGCAATAGGACGTGATCCCAATTGCTGGACAAACCCT-AAC 1232
Query 1238 GAATTCAATCC-TGAGAGGTTTGCAAATA-CCTCAATCAACTACAAAGGTCAGCATTACG 1295
|| || | ||| ||||||||||| ||| || | ||| ||||||| |||||||||| |
Sbjct 1233 GAGTTTA-TCCCTGAGAGGTTTGTTGATAGCC-CTATCGACTACAAGGGTCAGCATTTTG 1290
Query 1296 AGCTT-TTACCCTTTGGAGCCGGTCGTAGGAGCTGTCCTGGTATGACTTT-GGGAATCAC 1353
| || || || || || | || ||||||| |||||| || ||| | |||| | ||
Sbjct 1291 AA-TTGTTGCCATTCGGTGGAGGCCGTAGGATCTGTCCCGGGATGGCCACAGGGA-TGAC 1348
Query 1354 CATTCTTG-AGCTAGGCCTTCTTAACATTCTTTACTACTTCGATTGGAGTTTACCCAATG 1412
||| | || | || ||||| |||||| ||||||| | ||||||||||||||||||| |||
Sbjct 1349 CAT-CGTGGAACTTGGCCTCCTTAACGTTCTTTATTTCTTCGATTGGAGTTTACCCGATG 1407
Query 1413 GAATGACCATTAAAGACATTGACATGGAAGAAGATGGAGCTTT-GACCATCGCCAAGAAA 1471
|||||| ||| ||||||| |||||||||||| ||||||||| | | || |||||||||
Sbjct 1408 GAATGAATATTGCAGACATTAACATGGAAGAAGCTGGAGCTTTCGTC-ATTGCCAAGAAA 1466
Query 1472 GTCCCTCTTGAGCTC 1486
||||| |||||||||
Sbjct 1467 GTCCCACTTGAGCTC 1481
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56983006520
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5