BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G36150.1 Length=2283 Score E Sequences producing significant alignments: (Bits) Value Ahg896878 jgi|Araly1|896878|Al_scaffold_0005_844 2283 0.0 Ahg916218 jgi|Araly1|916218|Al_scaffold_0008_969 1498 0.0 Ahg316749 jgi|Araly1|316749|fgenesh1_pm.C_scaffold_2001782 1439 0.0 > Ahg896878 jgi|Araly1|896878|Al_scaffold_0005_844 Length=2127 Score = 2283 bits (1236), Expect = 0.0 Identities = 1716/1949 (88%), Gaps = 27/1949 (1%) Strand=Plus/Plus Query 1 ATGTGGAGGCTGAGGATCGGAGCTAAGGCAGGAGATGACCCTCACTTGTGCACCACCAAC 60 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 ATGTGGAAGCTGAGGATCGGAGCTAAGGCAGGAGATGATCCTCACTTGTGCACCACCAAC 60 Query 61 AACTTCTTGGGAAGGCAGATATGGGAGTTTGATGCCAACGCAGGCTCTCCAGCGGAACTC 120 |||| | | |||||||||||||||||||||||| || | ||||||||||| | |||||| Sbjct 61 AACTACCTCGGAAGGCAGATATGGGAGTTTGATACCCATGCAGGCTCTCCGGAAGAACTC 120 Query 121 TCTGAGGTTGATCAGGCTCGACAAAATTTCTCAAACAATAGGTCACAATACAAGGCTTGT 180 | ||||||||| |||||||||| |||||||| |||||||||||||||||||| ||| || Sbjct 121 TTTGAGGTTGAGCAGGCTCGACGGAATTTCTCCAACAATAGGTCACAATACAAAGCTAGT 180 Query 181 GCCGATCTCCTT-TGGCGTATGCAGTTTCTAAGGGAGAAGAATTTCGAGCAAAAGATTCC 239 |||||||| || |||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct 181 GCCGATCT-GTTGTGGCGTATGCAGTTTCTAAGGGAGAAAAAGTTCGAACAAAATATTCC 239 Query 240 ACGAGTGAGAATAGAGGATGCCAAGAAAATAACATTTGAAGACGCAAAAAATACACTGAG 299 || |||| || | | |||||| |||||||||||| |||||| || || | ||||||| Sbjct 240 GCGGGTGA-AA-ATA-GATGCCGAGAAAATAACATATGAAGAAGCGAATACGGCACTGAG 296 Query 300 AAGAGGAATACATTATATGGCAGCGTTGCAATCTGATGATGGACATTGGCCTTCCGAAAA 359 |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| | ||||| Sbjct 297 AAGAGGTATACACTATATGGCAGCGTTGCAGTCTGATGATGGACATTGGCCTGCTGAAAA 356 Query 360 CGCTGGTTGCATTTTCTTCAATGCCCCCTTTGTTATATGTTTGTATATCACTGGCCATCT 419 | |||||||||| ||||| || || |||||||| |||||||||||||||||||||||||| Sbjct 357 CTCTGGTTGCATGTTCTTTAACGCTCCCTTTGTCATATGTTTGTATATCACTGGCCATCT 416 Query 420 GGATA-AAGTTTTCTCTGAAGAGCATCGGAAAGAGATGTTGCGTTACATGTACAACCATC 478 |||| || | |||||| |||||||||| ||||||||||||||||| ||||||||||||| Sbjct 417 AGATACAA-TCTTCTCTCAAGAGCATCGCAAAGAGATGTTGCGTTATATGTACAACCATC 475 Query 479 AGAACGACGATGGTGGATGGGGAATAGACGTAGAAAGCCATAGTTTTATGTTTTGCACGG 538 |||| ||||||||||| ||||| ||||||| ||||||||||||| ||||| ||||||| Sbjct 476 AGAATGACGATGGTGGGTGGGGGCTAGACGTCGAAAGCCATAGTTCAATGTTCTGCACGG 535 Query 539 TCATCAACTACATCTGCCTACGAATCT-TCGG-AGTAGATCCCGATCATGATGGT---GA 593 |||||||||| |||||||||||||| | | || ||| ||||| ||| |||||||| | Sbjct 536 TCATCAACTATATCTGCCTACGAAT-TAT-GGAAGTGGATCCTGATTATGATGGTAAAAA 593 Query 594 AAGTGCTTGTGCAAGGGCTCGTAAATGGATCATTGACCACGGTGGCGCTACCTATACGCC 653 || |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 594 AAATGCTTGTGCAAGGGCTCGTAAATGGATCATTGACCACGGTGGTGCTACCTATACACC 653 Query 654 ATTATTTGGAAAAGCCTGGCTTTCGGTTCTTGGAGTATATGAATGGTCTGGTTGCAAACC 713 ||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 654 ATTGTTTGGAAAAGCTTGCCTTTCGGTTCTTGGAGTGTATGAATGGTCTGGTTGCAAACC 713 Query 714 CATACCCCCAGAGTTCTGGTTTTTTCCTTCCTATTTTCCTATTAATGGAGGCACTCTCTG 773 ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| | || Sbjct 714 TATACCACCAGAGTTCTGGTTATTTCCTTCTTATTTCCCTATTAATGGAGGCACTGTTTG 773 Query 774 GATATATTTACGGGATACTTTCATGGCAATGTCCTATTTGTATGGTAAAAAATTTGTTGC 833 ||| ||||| || ||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 774 GATTTATTTGCGTGATACTTTCATGGCACTGTCCTATTTGTATGGTAAAAAATTTGTAGC 833 Query 834 TAAACCAACACCTCTCATTCTACAACTTCGTGAAGAACTTTATCCTCAACCTTATGCTGA 893 || |||||||| ||||||||||| || || ||||| ||||||||||| |||||||||| Sbjct 834 TACTCCAACACCCCTCATTCTACAGCTCCGAGAAGAGCTTTATCCTCAGGCTTATGCTGA 893 Query 894 AATTGTTTGGAGCCAAGCTCGCAGTCGATGTGCGAA-GGAAGATCTATATTATCCACAAT 952 |||||||||||| |||||||| | |||||| || || |||||||||||| |||||||||| Sbjct 894 AATTGTTTGGAGTCAAGCTCGGAATCGATGCGC-AATGGAAGATCTATACTATCCACAAT 952 Query 953 CAT-TGGTACAAGACTTGTTTTGGAAACTTGTTCACATGTTTTCGGAGAATATCTTAAAT 1011 ||| || |||||||||||||||||||| |||||| ||||| || ||||||||||||||| Sbjct 953 CATATG-TACAAGACTTGTTTTGGAAAAGTGTTCATATGTTCTCTGAGAATATCTTAAAT 1011 Query 1012 CGATGGCCTTTCAACAAGCTCATTAGAGAAAAAGCTATTCGAACGGCAATGGAACTCATT 1071 |||||||||||||| |||||||| ||||| | |||||| |||| |||||||||||| || Sbjct 1012 CGATGGCCTTTCAAGAAGCTCATAAGAGAGAGAGCTATGCGAAGGGCAATGGAACTTATC 1071 Query 1072 CACTACCATGACGAAGCCACCCGGTACATTACAGGTGGAGCAGTGCCAAAGGTGTTTCAT 1131 || ||| ||||||||||| ||| |||||||| ||||||| |||||||||||||||||| Sbjct 1072 CATTACTATGACGAAGCCTCCCAATACATTACCGGTGGAGGTGTGCCAAAGGTGTTTCAT 1131 Query 1132 ATGCTTGCTTGTTGGGTTGAAGATCCAGAGAGTGATTATTTTAAAAAACATCTTGCGCGA 1191 |||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||| | Sbjct 1132 ATGCTTGCTTGTTGGGCTGAGGATCCCGAGAGTGAATATTTTAAAAAACATCTTGCTTGT 1191 Query 1192 GTCTCTCATTTCATATGGATTGCGGAGGACGGCTTGAAAATCCAGACTTTTGGTAGCCAA 1251 |||||| || |||||||||| ||||||||||| | |||||||||| |||||| |||||| Sbjct 1192 GTCTCTGGTTACATATGGATTTCGGAGGACGGCCTAAAAATCCAGAGTTTTGGCAGCCAA 1251 Query 1252 ATATGGGATACAGCCTTCGTT-CTCCAAGTCATGTTAGCGGCTGATGTTGACGATGAGAT 1310 |||||||||||| |||| ||| || |||||||||||||| |||||| |||| |||||||| Sbjct 1252 ATATGGGATACAACCTT-GTTGCTACAAGTCATGTTAGCCGCTGATATTGATGATGAGAT 1310 Query 1311 AAGGCCAACGCTCATAAAGGGATACTCTTACTTGAGGAAATCCCAATTTACAGAGAATCC 1370 ||| |||||||||||||||||||||||| |||||||||||| || ||| ||||||||| Sbjct 1311 AAGATCAACGCTCATAAAGGGATACTCTTTCTTGAGGAAATCTCAGCTTATAGAGAATCC 1370 Query 1371 TCCCGGTGACTATATCAATATGTTTAGAGACATATCCAAAGGAGGGTGGGGCTATTCAGA 1430 ||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| | ||| || Sbjct 1371 TCCTGGTGACTATATCAAAATGTTCAGAGACATATCAAAAGGAGGATGGGGTTTTTCGGA 1430 Query 1431 CAAAGATCAAGGATGGCCTGTTTCAGATTGTATTTCTGAGAGTTTAGAGTGCTGCCTGAT 1490 |||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||| Sbjct 1431 CAAAGATCAAGGATGGCCAGCTTCAGATTGTACTTCCGAGAGTTTAGAGTGCTGCCTGAT 1490 Query 1491 CTTTGAGAGTATGTCATCCGAATT-CATTGGTGAGAAAATGGAAGTGGAGAGGCTTTATG 1549 ||||||||| ||| | || |||| |||||||||||||||||| |||||||||||||||| Sbjct 1491 CTTTGAGAGCATGCCGTCT-AATTTCATTGGTGAGAAAATGGACGTGGAGAGGCTTTATG 1549 Query 1550 ATGCCGTCAATATGCTTCTCTATATGCAGAGCAGAAATGGAGGGATATCTATATGGGAAG 1609 |||| ||||||||| |||||||| ||||||||| ||||||||| ||| || ||||||| | Sbjct 1550 ATGCAGTCAATATGATTCTCTATTTGCAGAGCAAAAATGGAGGTATAGCTGTATGGGA-G 1608 Query 1610 C-AGCGAGTGGGAAAAAATGGCTAGAGTGGCTTAGTCCCATAGAGTTTATTGAAGACACT 1668 | ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct 1609 CCAGCGAGTGGGAAAAAATGGCTAGAGTGGCTTAGCCCCATAGAGTTTATGGAAGATACA 1668 Query 1669 ATCCTCGAGCATGAGTATCTAGAATGCACGGGGTCAGCGATAGTGGTGTTGGCACGCTTC 1728 || |||||||||||||||||||||||||||||||||||| |||| |||||| | |||| | Sbjct 1669 ATACTCGAGCATGAGTATCTAGAATGCACGGGGTCAGCGGTAGTAGTGTTGACTCGCTAC 1728 Query 1729 ATGAAACAGTTTCCAGGGCATAGAACAGAAGAAGTCAAAAA-ATTTATAACAAAGGGAGT 1787 |||||||||||||| |||||||||||| ||||| | | ||| ||||||| |||||| ||| Sbjct 1729 ATGAAACAGTTTCCCGGGCATAGAACAAAAGAAAT-AGAAACATTTATAGCAAAGGCAGT 1787 Query 1788 GAAATACATAGAAAGCTTACAAATTGCGGATGGTTCGTGGTACGGAAACTGGGGAATATG 1847 |||||||||||||| || |||| ||||||||||||||||| ||||| |||||| | || Sbjct 1788 AAAATACATAGAAAGTTTGCAAACGGCGGATGGTTCGTGGTATGGAAATTGGGGAGTGTG 1847 Query 1848 TTTTATATATGGGACTTTCTTTGCTGTCCGAGGTTTAGTGGCCGCGGGAAACACTTACGA 1907 || || |||| ||| |||||||||||||||||||||||||| ||||| || |||||| | Sbjct 1848 CTTCATCTATGCGACATTCTTTGCTGTCCGAGGTTTAGTGGCTGCGGGCAAGACTTACCA 1907 Query 1908 TAACTGTGAGGCAATCCGTAGAGC-AGTT 1935 || || |||| | ||||||||||| |||| Sbjct 1908 TAGCTCTGAGCCGATCCGTAGAGCTAGTT 1936 Score = 241 bits (130), Expect = 2e-62 Identities = 171/191 (90%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 1981 AGTTTTCTTTCTTGCCCCAACAA-AAATTATATTCCTTTGGAGGGGAACAAGACCGATGT 2039 |||||||| ||||| |||||||| ||| |||||||| ||||| |||||||||||| |||| Sbjct 1933 AGTTTTCTCTCTTGTCCCAACAAGAAA-TATATTCCATTGGAAGGGAACAAGACCAATGT 1991 Query 2040 GGTGAATACAGGACAAGCATTGATGGTTCTAATAATGGGTGGTCAGATGGATAGAGATCC 2099 ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct 1992 GGTAAATACGGGACAAGCAATGATGGTTCTAATAATGGGTGGTCAGATGGAGAGAGACCC 2051 Query 2100 TTTACCGGTTCACCGCGCTGCAAAAGTATTAATCAATTCACAAATGGATAACGGTGATTT 2159 |||||| ||||| || ||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct 2052 TTTACCAGTTCATCGTGCTGCGAAAGTTTTAATTAATTCGCAAATGGATAACGGTGATTT 2111 Query 2160 TCCACAGCAGG 2170 |||||| |||| Sbjct 2112 TCCACAACAGG 2122 > Ahg916218 jgi|Araly1|916218|Al_scaffold_0008_969 Length=2301 Score = 1498 bits (811), Expect = 0.0 Identities = 1850/2337 (79%), Gaps = 129/2337 (6%) Strand=Plus/Plus Query 1 ATGTGGAGGCTGAGGA-TCGGAGCTAAGGCAGGAGATGACCCTCACTTGTGCACCACCAA 59 ||||||||||||| || | ||| | ||||| ||||| || ||||||||| ||||||||| Sbjct 1 ATGTGGAGGCTGA-GACTTGGACCGAAGGCCGGAGAAGATACTCACTTGTTCACCACCAA 59 Query 60 CAACT-T-CTTGGGAAGGCAGATATGGGAGTTTGATGCCAACGCAGGCTCTCCAGCGGAA 117 ||||| | | ||| |||||||| |||||||| |||||||||||||||||||||| |||| Sbjct 60 CAACTATGC-CGGG-AGGCAGATTTGGGAGTTCGATGCCAACGCAGGCTCTCCAGAGGAA 117 Query 118 CTCT-CTGAGGTTGATCAGGCTCGACAAAATTTCTCAAACAATAGGTCACAATACAAGGC 176 || | | ||||| || | ||||| || ||||| |||||||| |||||| | |||| | Sbjct 118 CT-TGCCGAGGTAGAGGATGCTCGTCAGAATTTTTCAAACAACCGGTCACGTTTCAAGAC 176 Query 177 TTGTGCCGATCTCCTTTGGCGTATGCAGTTTCTAAGGGAGAAGAATTTCGAGCAAAAGAT 236 |||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 177 CAGTGCAGATCTCCTATGGCGGATGCAGTTTCTCAGGGAGAAGAAATTCGAGCAAAAGAT 236 Query 237 TCCACGAGTGAGAATAGAGGATGCCAAGAAAATAACA-TTTGAAGACGCAAAAAATACAC 295 ||||||||||| | |||||||||| | |||||||| | | ||||| ||||| | || Sbjct 237 TCCACGAGTGATAGTAGAGGATGCGAGGAAAATAA-AGTACGAAGATGCAAAGACCGCAT 295 Query 296 TGAGAAGAGGAATACAT-TATATGGCAGCGTTGCAATCTGATGATGGACATTGGCCTTCC 354 |||||||||| ||| | ||| | |||| ||||| ||||||||||||| ||||| | Sbjct 296 TGAGAAGAGGGTTAC-TCTATTTCACAGCCTTGCAGGCTGATGATGGACACTGGCCAGCT 354 Query 355 GAAAACGCTGGTTGC-ATTTTCTTCAATG-CCC-CCTTTGTT-ATATGTTTGTATATCAC 410 |||||| |||| | | | |||| | | | ||| ||||| || ||||| |||| ||||| Sbjct 355 GAAAACTCTGG-TCCAAATTTC-T--ACGCCCCACCTTTTTTGATATGCCTGTACATCAC 410 Query 411 TGGCCATCTGGATAAAGTTTTCTCTGAAGAGCATCG-GAAAGAGATGTTGCGTTACATGT 469 ||| ||||||| ||| | ||| || |||||| | |||||| | | ||| |||| | Sbjct 411 TGGAAATCTGGAGAAAATCTTCACTCCCGAGCAT-GTTAAAGAGTTACTACGTCACATCT 469 Query 470 ACAACCAT-CAGAACGACGATGGTGGATGGGGAATAGACGTAGAAAGCCATAGTTTTATG 528 |||| ||| |||||||| |||||||| |||||| || ||||||||||||| ||| ||||| Sbjct 470 ACAA-CATGCAGAACGAAGATGGTGGGTGGGGATTACACGTAGAAAGCCACAGTGTTATG 528 Query 529 TTTTGCACGGTCATCAACTACATCTGCCTACGAATCT-TCGGAGTAG-ATCCCGATCATG 586 || || || |||||||||||||| || || |||| | | || | || | || | ||||| Sbjct 529 TTCTGTACAGTCATCAACTACATTTGTTTAAGAAT-TGTGGGCGAAGAAGCCAG-TCATG 586 Query 587 ATGGT----GAAAGTGCTTGTGCAAGGGCTCGTAAATGGATCATTGACCACGGTGGCGCT 642 ||| | |||| || |||||||| ||||| ||| |||||||| ||||| ||||| ||| Sbjct 587 ATGATCAAGGAAA-TGGTTGTGCAAAGGCTCATAAGTGGATCATGGACCATGGTGGTGCT 645 Query 643 ACCTATACGCCATT-ATTTGGAAAAGCCTGGCTTTCGGTTCTTGGAGTATATGAATGGTC 701 ||||| ||||| || | | |||||||| | || |||||||||||||| ||||| ||||| Sbjct 646 ACCTACACGCCCTTGA-TAGGAAAAGCGTTACTATCGGTTCTTGGAGTGTATGATTGGTC 704 Query 702 TGGTTGCAAACCCATACCCCCAGAGTTCTGGTTTTTTCCTTCCTATTTTCCTATTAATGG 761 ||| ||||| || ||||| |||||||||||||| |||| || | ||||||| ||||||| Sbjct 705 TGGATGCAATCCTATACCTCCAGAGTTCTGGTTGCTTCCGTCTTCTTTTCCTGTTAATGG 764 Query 762 A-G--GCACTCTCTGGATATATTTACGGGATACTTTCATGGCAATGTCCTATTTGTATGG 818 | | | ||||||||||| ||||||||||||||||| |||| |||| || |||||||| Sbjct 765 AGGTTGGACTCTCTGGATTTATTTACGGGATACTTTTATGGGGTTGTCATACTTGTATGG 824 Query 819 TAAAAAATTTGTTGCTAAAC-CAACACCTCTCATTCTACAA-CTTCGTGAAGAACTTTAT 876 |||||||||||| ||| | |||||||||||||||| ||| || || ||||| |||||| Sbjct 825 TAAAAAATTTGTGGCT-GCCTCAACACCTCTCATTCT-CAAGCTCCGAGAAGAGCTTTAT 882 Query 877 CCTCAACCTTATGCTGAAATTGTTTGGAGC-CAAGCTCGCAGTCGATGTGCGAAGGAAGA 935 || | |||||||| |||| ||||| | ||| | || | |||||||| |||||||| Sbjct 883 CCGGAGCCTTATGCAAAAATCAATTGGA-CGCAAACACGAAACCGATGTGCAAAGGAAGA 941 Query 936 TCTATATTATCCACAATCATTGGTACAAGACTTGTTTTGGAAACTTGTTCACATGTTTTC 995 ||| || ||||||| ||||| ||||||| |||||||||||| |||||||||||| || Sbjct 942 TCTCTACTATCCACGCTCATTTTTACAAGATTTGTTTTGGAAAAGTGTTCACATGTTCTC 1001 Query 996 GGAGAATATCTTAAATCGATGGCCTTTCAACAAGCTCATTAGAGAAAAAGCTATTCGAAC 1055 ||||| |||| || ||||||||||||| ||||| || || ||||| | |||| ||||| | Sbjct 1002 GGAGAGTATCCTAGATCGATGGCCTTTAAACAAACTAATAAGAGAGAGAGCTCTTCGATC 1061 Query 1056 GGCAATGGAACTCATTCACTACCATGACGAAGCCACCCGGTACATTACAGGTGGA-GCAG 1114 | ||| |||||||||||| ||||| ||| ||||| | || |||||||| ||| || Sbjct 1062 CACTATGTCACTCATTCACTATCATGATGAATCCACCAGATATATTACAGGCGGATGC-C 1120 Query 1115 TGCCAAAGGTGTTTCATATGCTTGCTTGTTGGGTTGAAGATCCAGAGAGTGATTATTTTA 1174 ||||||||| |||||||||||||| |||||| | ||||| || |||||||||||||||| Sbjct 1121 TGCCAAAGGCCTTTCATATGCTTGCATGTTGGATAGAAGACCCTGAGAGTGATTATTTTA 1180 Query 1175 AAAAACATCTTGCGCGAGTCTCTC-ATTTCATATGGATTG-CGGAGGACGGCTTGAAAAT 1232 ||||||||||||| ||||| || | | | ||||||||||| || |||| ||| ||||||| Sbjct 1181 AAAAACATCTTGCTCGAGT-TCGCGAATACATATGGATTGGCG-AGGATGGCCTGAAAAT 1238 Query 1233 CCAGACTTTTGGTAGCCAAATATGGGATACAGCCTT--CGTTCTCCAAGTCATGTTAG-C 1289 ||| |||||||||||||| ||||||||||| |||| || || || ||| |||||| | Sbjct 1239 TCAGTCTTTTGGTAGCCAATTATGGGATACATCCTTATCG--CTACATGTCTTGTTAGAC 1296 Query 1290 GGC-T-GATGT---TGACG---ATGAGATAAGGCCAACGCTCAT-AAAGGGATACTC-TT 1339 || | |||| ||| | ||||||| || |||||||| | ||||| ||| | || Sbjct 1297 GGTATTGATGAGCATGATGTTGATGAGATTAGAACAACGCTCGTTAAAGG-ATA-TGATT 1354 Query 1340 ACTTGAGGAAATCCCAATTTACAGAGAATCCTCCCGGTGA-CTA-TATC-AATATGTTTA 1396 |||||| |||||| ||| |||||||||| |||| |||||| | | | || || |||||| Sbjct 1355 ACTTGAAGAAATCTCAAATTACAGAGAACCCTCGCGGTGATC-ACT-TCCAA-ATGTTTC 1411 Query 1397 GAGACATATCCAAA-GGAGGGTGGG-GCTATTCAGA-CAAAGATCAAGGATGGCCTGTTT 1453 | |||| | |||| || || ||| | | |||||| ||| ||||||||||||||||||| Sbjct 1412 GTCACAT-TACAAAAGGTGGATGGACGTT-TTCAGATCAA-GATCAAGGATGGCCTGTTT 1468 Query 1454 CAGATTGTATTTCTGAGAGTTTAGAGTGCTGCCTGAT-CTTTGAGAG-TATGTCATCCGA 1511 ||||||||| | |||| ||||||||||| || || || ||| ||||| | || |||| || Sbjct 1469 CAGATTGTACTGCTGAAAGTTTAGAGTGTTGTCT-ATTCTTCGAGAGCT-TGCCATCAGA 1526 Query 1512 ATTCATTGGTGAGAAAA-TGGAAGTGGAGAGGCTTTATGATGCCGTCAAT-ATGCTTCTC 1569 | || || || |||| |||| |||| || || |||||||| || || || |||||| Sbjct 1527 GCTAATCGG-GAAAAAAATGGATGTGGGGAAACTGTATGATGCTGTTGATTAT-CTTCTC 1584 Query 1570 TATATGCAGAGCAGA-AATGGAGGGATATCTAT-ATGGGAAGCAGC-GAGTGGGAAAAAA 1626 ||| ||||||| || |||||||| ||| | | |||| || | | || ||||||| Sbjct 1585 TATCTGCAGAGT-GATAATGGAGGCATAGC-AGCATGGCAACCGGTTGA-TGGGAAAGCC 1641 Query 1627 TGGCTAGAGTGGCTTAGTCCCA-TAGAGTTTATTGAAGACACTATCCTCGAGCATGAGTA 1685 ||| |||||||||||||||| | | |||||| |||||||| | | ||||| ||||||| Sbjct 1642 TGGTTAGAGTGGCTTAGTCC-AGTGGAGTTTCTTGAAGACGCGGTGGTCGAGTATGAGTA 1700 Query 1686 TCTAGAATGCACGGGGTCAGCGATAGTGGTGTTGGC-ACGCTT-CATGAAACAGTTTCCA 1743 | ||||||| |||||||||||||| || | |||||| | | || | | |||||||||||| Sbjct 1701 TGTAGAATGTACGGGGTCAGCGATTGTCGCGTTGGCTAAGTTTAC-T-AAACAGTTTCCA 1758 Query 1744 GGGCATAGAA-CAGAAGAAGTCAAAAAATTTATAACAAAGGGAGTGAAA-TACATAGAA- 1800 | | ||| || | | ||| || ||| | |||||||||||||| | ||| ||||| ||| Sbjct 1759 GAGTATAAAAAC-GCAGAGGTTAAACAGTTTATAACAAAGGGTGC-AAAGTACATTGAAG 1816 Query 1801 AGCTTACAAATTGCGGATGGTTCGTGGTACGGAAACTGGGGAATATGTTTTATATATGGG 1860 | | | |||| | ||||||||| ||||||||||| |||||| | ||||||||||||||| Sbjct 1817 A-CATGCAAACGGTGGATGGTTCATGGTACGGAAATTGGGGAGTGTGTTTTATATATGGG 1875 Query 1861 ACTTTCTTTGCTGTCCGAGGT-TTAGTGGCCGC-GGGAAACACTTACGATAACTGTGAGG 1918 || |||||||| || ||||| || ||||| || ||||| ||||||| ||||||||| | Sbjct 1876 ACCTTCTTTGCGGTAAGAGGTCTT-GTGGCTGCTGGGAAG-ACTTACGGTAACTGTGAAG 1933 Query 1919 CAATCCGTAGAGCAGTTCGATTCCTTCTTGATATACAAAA-CGGTGAAGGCGGTTGGGGA 1977 |||| |||| ||||||||| || ||||| || | |||||| | | || || || |||||| Sbjct 1934 CAATTCGTAAAGCAGTTCGTTTTCTTCTCGACACACAAAATCTG-GAGGGTGGATGGGGA 1992 Query 1978 GAGAGTTTTCTTTCTTGCCCCAA-CAAAA-ATTATATTCCTTTGGAGGGGAACAAG-ACC 2034 ||||| ||||| ||||| || || ||| | || | | ||||||| | || |||| | || Sbjct 1993 GAGAGCTTTCTCTCTTGTCC-AAGCAAGATAT-ACACTCCTTTGAAAGGAAACA-GCACA 2049 Query 2035 GATGTGGTG-AATACAGGACAAGCA-TTGATGGTTCTAATAATGGGTGGTCAGATGGATA 2092 |||||||| || |||||||||||| || || || ||||| |||| || ||| ||||| | Sbjct 2050 AATGTGGTGCAA-ACAGGACAAGCACTT-ATAGTGCTAATTATGGCTGATCAAATGGAGA 2107 Query 2093 GAGATCCTTTACCGGTTCACCGCGCTGCAAAAGTATTAATCAATTCACAAATGGATAACG 2152 ||||||||||||||||||| |||||||| ||||| || ||||||||||| ||||||| | Sbjct 2108 GAGATCCTTTACCGGTTCATCGCGCTGCCAAAGTGTTGATCAATTCACAGTTGGATAATG 2167 Query 2153 GTGATTTTCCACAGCAGGAAATAAGGGGT--GTTTACAAAATGAA-TGTGATGCTAAATT 2209 | ||||||||||| |||||||||| ||| ||| || | ||| ||||||||| ||| Sbjct 2168 GCGATTTTCCACAACAGGAAATAATGGGAACGTT--CATGA-GAACTGTGATGCTCCATT 2224 Query 2210 TTCCAACCTTTAGAAACTCTTTCACTCTTTGGGCACTAACACACTACAC-CAAGGCT 2265 ||||||||| ||| ||| | ||| |||||||||| || ||||| ||||| || |||| Sbjct 2225 TTCCAACCTATAGGAACACGTTCTCTCTTTGGGCTCTCACACATTACACACA-GGCT 2280 > Ahg316749 jgi|Araly1|316749|fgenesh1_pm.C_scaffold_2001782 Length=2256 Score = 1439 bits (779), Expect = 0.0 Identities = 1825/2316 (79%), Gaps = 128/2316 (6%) Strand=Plus/Plus Query 1 ATGTGGAGGCTGAGGATCGGAGCT-AAGGCAGGAGATGACCCTCACTTGTGCACCACCAA 59 |||||||| || || || | |||| || || ||||| | |||||||| ||| ||||| Sbjct 1 ATGTGGAGACTAAGAATTGCAGCTGAA-GCTGGAGACAAGAATCACTTGTTCACAACCAA 59 Query 60 CAACTTCTTG--GGAAGGCAGATATGGGAGTTTGATGCCAACGCAGGCTCTCCAGCGGAA 117 | | || || || || ||||| ||||| |||||||| || |||||||| || | |||| Sbjct 60 C-AGTT-ATGCCGGTAGACAGATTTGGGAATTTGATGCTAAGGCAGGCTCGCCTGAGGAA 117 Query 118 CTCTCTGAGGTTGATCAGGCTCGACAAAATTTCTCAAACAATAGGTCACAATACAAGGCT 177 | |||| || || ||| |||||| || ||||||| |||| | | | | |||| || Sbjct 118 TTAGCTGAAGTCAATAAGGTTCGACAGAAGTTCTCAAGCAATCCGCCTCGTTTCAAGTCT 177 Query 178 TGTGCCGATCTCCTTTGGCGTATGCAGTTTCTAAGGGAGAAGAATTTCGAGCAAAAGATT 237 |||| ||||| |||||||| |||||||||||||||||||||| ||| ||||| |||||| Sbjct 178 AGTGCTGATCTACTTTGGCGCATGCAGTTTCTAAGGGAGAAGAGTTTTGAGCAGAAGATT 237 Query 238 CCACGAGTGAGAATAGAGGATGCCA-AGAAAATAACATTTGAAGACGCAAAAAAT-ACAC 295 || ||||||| |||||| |||| | |||| ||||||| ||||||||| || || ||| Sbjct 238 CCGCGAGTGATAATAGATGATG-AACAGAAGATAACATATGAAGACGC-CAAGATGGCAC 295 Query 296 TGAGAAGAGGAATACAT-TATATGGCAGCGTTGCAATCTGATGATGGACATTGGCCTTCC 354 | | |||||| |||| | ||| | || || |||||| | ||||||||||| |||||| | Sbjct 296 TTAAAAGAGGGATAC-TCTATTTTGCGGCCTTGCAAGCCGATGATGGACACTGGCCTGCT 354 Query 355 GAAAACGCTGGTTGCATTTTCTTC-AATGCCCCCTTTGTTATATGTTTGTATATCACTGG 413 ||||| ||||| | | |||||| || || |||||||| ||| | |||||||||||||| Sbjct 355 GAAAATTCTGGTCCCCTGTTCTTCGAA-GCTCCCTTTGTCATAAGCTTGTATATCACTGG 413 Query 414 CCATCTGGATAAAGTTTTCTCTGAAGAGCATCGGAAAGAGATGTTGCGTTACATGTACAA 473 |||||||||||| | |||||| |||||||||| |||||| || |||||||||||||||| Sbjct 414 GCATCTGGATAAAATCTTCTCTCAAGAGCATCGCAAAGAGCTGATGCGTTACATGTACAA 473 Query 474 CCATCAGAACGACGATGGTGGATGGGGAATAGACGTAGAAAGCCATAGTTTTATGTTT-T 532 |||||||||||| ||||||||||||||| || | || ||| |||| ||| || || || | Sbjct 474 CCATCAGAACGATGATGGTGGATGGGGATTACATGTGGAAGGCCACAGTGTT-TGGTTCT 532 Query 533 GCACGGTCATCAACTACATCTGCCTACGAATCTTCGG-AGTAGATCCCGATCATGATGGT 591 | ||||| ||||||||||| || ||| |||| || || | |||| || || || || Sbjct 533 GTACGGTTATCAACTACATATGTCTAAGAATTTTTGGGA-TAGAGCCTGACCAAGA---- 587 Query 592 GAAAGTGCTTGTGCAAGGGCTCGTAAA-TGGATCATTGACCACGGTGGCGCTACCTATAC 650 ||| || ||||||||||||||| ||| |||||| | ||||||||||| ||||| ||||| Sbjct 588 -AAA-TGTTTGTGCAAGGGCTCG-AAAGTGGATCCTCGACCACGGTGGTGCTACTTATAC 644 Query 651 GCCATT-ATTTGGAAAAGCCT-GGCTTTCGGTTCTTGGAGTATATGAATGGTCTGGTTGC 708 || || || ||||| | | ||||||||||||||||||| ||||| |||||||||||| Sbjct 645 ACCTTTGATC-GGAAA-GATTTGGCTTTCGGTTCTTGGAGTGTATGATTGGTCTGGTTGC 702 Query 709 AAACCCATACCCCCAGAGTTCTGGTTTTTTCCTTCCTATTTTCCTATTAATGGAGGCACT 768 ||||||||||| || ||||| ||| | | ||||| | || |||| | |||||||||||| Sbjct 703 AAACCCATACCACCGGAGTTTTGGATGCTCCCTTCTTCTTCTCCTGTCAATGGAGGCACT 762 Query 769 CTCTGGATATATTTACGGGATACTTTCATGGCAATGTCCTATTTGTATGGTAAAAAATTT 828 || ||||| ||||| ||||| | ||| ||||| |||| || |||||||| ||||||||| Sbjct 763 CTATGGATTTATTTCCGGGACATTTTTATGGCTGTGTCATACTTGTATGGCAAAAAATTT 822 Query 829 GTTGCTAAACCAACACCTCTCATT-CTACAACTTCGTGAAGAACTTTATCCTCAACCTTA 887 || ||||| |||||||||| ||| | ||| || || ||||| ||||||||||| | ||| Sbjct 823 GTCACTAAAACAACACCTCTAATTGC-ACAGCTCCGGGAAGAGCTTTATCCTCAGCGTTA 881 Query 888 T-GCTGAAATTGTTTGGAGCCAAGCTCGC-AGTCGATGTGCGAAGGAAGATCTATATTAT 945 | || |||||| |||||||||||||||| | | ||| || |||||||||||||| ||| Sbjct 882 TAGCA-AAATTGATTGGAGCCAAGCTCGCCAA-CAATGCGCAAAGGAAGATCTATACTAT 939 Query 946 CCACAATCATTGGTACAAGACTTGTTTTGGAAACTTGTTCACATGTTTTCGGAGAATATC 1005 ||||||||||| |||||| |||||||||||| | |||||| ||||| || |||||| || Sbjct 940 CCACAATCATTTGTACAAAACTTGTTTTGGAGAGGTGTTCATATGTTGTCAGAGAATGTC 999 Query 1006 TTAAATC-GATGGCCTTTCAACAAGCTCATTAGAGAAAAAGCTATTCG-AACGGCAATGG 1063 || |||| | |||||||||||||| ||||| ||| ||| ||| | || || |||||| Sbjct 1000 TTGAATCAG-TGGCCTTTCAACAAACTCATAAGACAAAGAGCGCTCCGGAAAA-CAATGG 1057 Query 1064 AACTCATTCACTACCATGACGAAGCCACCCGGTACATTACAGGTGGA-GCAGTGCCAAAG 1122 ||||||||||||||||| |||||| |||| | |||||||| |||||| | |||| ||| Sbjct 1058 AACTCATTCACTACCATAACGAAGTCACCAGATACATTACTGGTGGATGT-GTGCAAAAT 1116 Query 1123 GTGTTTCATATGCTTGCTTGTTGGGTTGAAGATCCAGAGAGTGATTATTTTAAAAAACAT 1182 ||||||||||||||||||||| | ||||| |||||||||||||| ||||| || ||| Sbjct 1117 CCATTTCATATGCTTGCTTGTTGGATAGAAGACCCAGAGAGTGATTACTTTAAGAAGCAT 1176 Query 1183 CTTGCGCGAGTCTCTCATTTCATATGGATTGCG-GAGGACGG-CTTGAAAATCCAGACTT 1240 || | ||||| | ||| ||||||||||| | ||||| || || ||||||||| | | Sbjct 1177 CTCACTAGAGTCGCAGATTACATATGGATTG-GAGAGGATGGTCTA-AAAATCCAGTCGT 1234 Query 1241 TTGGTAGCCAAATATGGGATACAGCC-T-TCGTTCTCCAAGTCATGTTAGC-G--GCTGA 1295 |||||||||| | |||||||| ||| | || |||||||||||||||| | ||||| Sbjct 1235 TTGGTAGCCAGTTGTGGGATACGGCCCTATCA--CTCCAAGTCATGTTAGGTGCTGCTGA 1292 Query 1296 TGTT---GACGATGAGA-TA--AG-GCCAACGCTCATAAAGGGATACTC-TTACTTG-AG 1346 |||| || ||||||| || | || |||| | | ||||||||| || |||| || Sbjct 1293 TGTTATTGATGATGAGAGTATTAAAGC-AACGTTGGTCAAGGGATACAAATT-CTTGGAG 1350 Query 1347 GAAATCCCA-ATTTACAGAGAATCCTCCCGGTGACTATATCAATATGTTTAGAGACATAT 1405 || || || || ||| ||||||||||||||||| |||| || ||||| || |||| | Sbjct 1351 -AATTCTCAGATA-ACACAGAATCCTCCCGGTGACCATATGAAAATGTTCCGACACAT-T 1407 Query 1406 CCAAA-GGAGGGTGGGGCTATT-CAGACAAAGATCAAGGATGGCCTGTTTCAGATTGTAT 1463 |||| || || ||| || || ||||| |||||||||||||||||||||| ||||| | Sbjct 1408 ACAAAAGGTGGATGGA-CTTTTTCAGACCAAGATCAAGGATGGCCTGTTTCTGATTGCAC 1466 Query 1464 TTCTGAGAGTTTAGAGTGCTGCCTGATCTTTGAGAGT-ATGTCATCCGA-ATTCATTGGT 1521 | |||||||||||||||| ||||| |||||||| || | | | | || || ||||||| Sbjct 1467 TGCTGAGAGTTTAGAGTGTTGCCTAATCTTTGAAAGCCA-GCCGTTTGAGAT-CATTGGT 1524 Query 1522 GAGAAAATGGAAGTGGAGAGGCTTTATGATGCCGTCAATATGCTTCTCTATATGCAGAGC 1581 ||||||||||| || |||| |||||||| | | | || || | | | | | Sbjct 1525 GAGAAAATGGATGTCAAGAGACTTTATGA--C-G-C--TA-GC------A-A-G-A-A-- 1565 Query 1582 AGAAATGGAGGGATATCTATATGGGAAGC-AGCGAGTGGGAAAAAATGGCTAGAGTGGCT 1640 |||||| ||||| ||||| || ||| |||||||| |||||||||||||| Sbjct 1566 -----TGGAGGTATATCGGCGTGGGA-GCCAGCCCTTGGGAAAACCTGGCTAGAGTGGCT 1619 Query 1641 TAGTCCCA-TAGAGTTTATTGAAGACACTATCCTCGAGCATGAGTATCTAGAATGCACGG 1699 ||||| | | ||||| || ||| |||| ||| | ||||| |||||| |||||||||| | Sbjct 1620 CAGTCC-AGTGGAGTTCATGGAAAACACAATCGTGGAGCACGAGTATGTAGAATGCACAG 1678 Query 1700 GGTCAGCGATAGTGGTGTTGG-CACGCTTCATGAAACAGTTTCCAGGGCATAGAACAGAA 1758 | |||| |||| | | |||| || | |||| | |||||||||||| || ||| ||||| Sbjct 1679 GATCAGTGATAATAGCATTGGTCAGG-TTCAAGCAACAGTTTCCAGCTCACAGAGCAGAA 1737 Query 1759 GAAGTCAAAAAATTTATAACAAAGGGAGTGAAATACATAGAA-AGCTTACAAATTGCGGA 1817 || || ||| |||||| ||||||||||||||||||||| | ||||||| | | ||| Sbjct 1738 GAGGTTGAAAGGTTTATAGTAAAGGGAGTGAAATACATAGAGGA-CTTACAACTGGTGGA 1796 Query 1818 TGGTTCGTGGTACGGAAACTGGGGAATATGTTTTATATATGGGA-C-TTTCTTTGCTGTC 1875 |||||| ||||| || ||||||||| | ||||| || ||||| | | ||| |||||| | Sbjct 1797 TGGTTCATGGTATGGCAACTGGGGAGTGTGTTTCATGTATGG-ATCCTTT-TTTGCTATA 1854 Query 1876 CGAGGTTTAGTGGCCGCGGGAAACACTTAC-GATAACTGTGAGGCAATCCGTAGAGCAGT 1934 ||||| ||||||| || ||||| ||||| | |||||| |||| || ||||||||||| Sbjct 1855 AGAGGTCTAGTGGCTGCAGGAAAGACTTATAG-TAACTGCAAGGCGATTCGTAGAGCAGT 1913 Query 1935 TC-GATTCCTTCTTGATATACAAAACGGTGAAGGCGGTTGGGGAGAGAGTTTTCTTTCTT 1993 || | ||| |||| | | |||||||| ||||||||||||||||||||||||||| |||| Sbjct 1914 TCAG-TTCTTTCTCAACACACAAAACGTTGAAGGCGGTTGGGGAGAGAGTTTTCTCTCTT 1972 Query 1994 GCCCCAACAA-AAATTATATTCCTTTGGAGGGGAACAAGACCGATGTGGTGAATACAGGA 2052 |||||||||| |||| |||||||| | || || ||||||| |||| |||||||||||| Sbjct 1973 GCCCCAACAAGAAAT-ATATTCCTCTAGAAGGAAACAAGAGTAATGTAGTGAATACAGGA 2031 Query 2053 CAAGCAT-TGATGGTTCTAATAATGGGTGGTCAGATGGATAGAGATCCTTTACCGGTTCA 2111 ||||| | | |||| |||||| ||||||||||||||||| || | || ||||| ||||| Sbjct 2032 CAAGC-TCTAATGGGTCTAATTATGGGTGGTCAGATGGAGCGAAACCCGTTACCAGTTCA 2090 Query 2112 CCGCGCTGCAAAAGTATTAATCAATTCACAAATGGATAACGGTGATTTTCCACA-GCAGG 2170 ||| ||||| ||||| || ||||||| || |||||||||||||||||||| || | ||| Sbjct 2091 CCGTGCTGCCAAAGTGTTGATCAATTTGCAGATGGATAACGGTGATTTTCCCCAAG-AGG 2149 Query 2171 AAATAAG-GG-GTGTTTACAAAATGAATGTGATGCTAAATTTTCCAACCTTTAGAAAC-T 2227 ||||||| || ||||||| | | |||||||| ||||| ||| |||||| | ||| ||| | Sbjct 2150 AAATAAGAGGAGTGTTTA-AGA-TGAATGTGCTGCTACATTATCCAACATATAGGAACAT 2207 Query 2228 CTTTCACTCTTTGGGCACTAACACACTACAC-CAAG 2262 || |||||| |||||||| ||| | || || |||| Sbjct 2208 ATT-CACTCTCTGGGCACTCACATATTATACTCAAG 2242 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85969682965 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5