BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G36730.1 Length=1233 Score E Sequences producing significant alignments: (Bits) Value Ahg333398 jgi|Araly1|333398|fgenesh1_pm.C_scaffold_769000001 254 1e-66 Ahg929516 jgi|Araly1|929516|scaffold_301973.1 165 7e-40 Ahg342623 jgi|Araly1|342623|fgenesh1_pg.C_scaffold_3002386 143 3e-33 Ahg930559 jgi|Araly1|930559|scaffold_303016.1 100 2e-20 Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1 100 2e-20 Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1 100 2e-20 Ahg485308 jgi|Araly1|485308|fgenesh2_kg.5__1300__AT3G49510.1 97.1 3e-19 Ahg929515 jgi|Araly1|929515|scaffold_301972.1 93.5 3e-18 Ahg930371 jgi|Araly1|930371|scaffold_302828.1 84.2 2e-15 Ahg930556 jgi|Araly1|930556|scaffold_303013.1 75.0 1e-12 Ahg342182 jgi|Araly1|342182|fgenesh1_pg.C_scaffold_3001945 75.0 1e-12 Ahg312135 jgi|Araly1|312135|fgenesh1_pm.C_scaffold_1000915 75.0 1e-12 Ahg913019 jgi|Araly1|913019|Al_scaffold_0001_3273 73.1 4e-12 Ahg318446 jgi|Araly1|318446|fgenesh1_pm.C_scaffold_3001462 69.4 6e-11 Ahg333377 jgi|Araly1|333377|fgenesh1_pm.C_scaffold_672000001 62.1 1e-08 > Ahg333398 jgi|Araly1|333398|fgenesh1_pm.C_scaffold_769000001 Length=924 Score = 254 bits (137), Expect = 1e-66 Identities = 483/640 (75%), Gaps = 64/640 (10%) Strand=Plus/Plus Query 548 TTGAAATCTACAATTTTAACTCTGATTCATGGAAGGTT-TTATATTTCACTTGTGACTGG 606 ||||||| ||||| |||||||||||||||||||||||| || |||||||| |||| || Sbjct 272 TTGAAATTTACAACTTTAACTCTGATTCATGGAAGGTTGTT-GATTTCACTCCTGAC-GG 329 Query 607 AAATTA-CCG-TTTTCTCAACTTGTTGTGTCTCTCAAGGGAAATACTTACTGGTTTGCTC 664 | || || |||| | || || ||||||||||||||||||||||||||||||||| Sbjct 330 GGA-TAGGCGCTTTTTTGTACATGGCGTGTCTCTCAAGGGAAATACTTACTGGTTTGCTA 388 Query 665 GAGAG-ATGT-A--TAT-ACACG-G-ACCAAGAA-T-A-G-A-T-C-TCCCTGA-TTTCT 709 ||||| |||| | ||| | | | | | |||||| | | | | | | | || | ||||| Sbjct 389 GAGAGTATGTGAGGTATGA-AGGTGTA-CAAGAAGTAATGAATTACGTGGCT-AGTTTCT 445 Query 710 TGATTTGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTTCATCTGCCGTTTCAC- 768 |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| || Sbjct 446 TGATTTGTTTTGATTTTACAACAGAGAGATTTGGACCGCGACTTCCTCTGCCTTTTGACA 505 Query 769 TCTCGTTGTGTT-GATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTT 827 | | || | | |||| ||||| |||| | |||||||||||||||||||||| |||||| Sbjct 506 TTT--TTATAATCGATAATGTGAGTCTCTCGAGTGTTAGAGAAGAGCAGCTTGTGGTGTT 563 Query 828 ATTTCAGGACTCAA--AAACGTTGATCCTAGAGGTATGGATAACG-ACTAAGATTGAGCC 884 | ||| | | | ||| |||| | ||| ||||| | | | | |||||||||||| Sbjct 564 ACATCACCAATGGATGAAA--TTGAGGATGGAGATATGGGTTA-GTAATAAGATTGAGCC 620 Query 885 TAATGCGGTCTCATGGAGCAGCAAGGTGTTCTTAGAAGTGAATATGAGTCCACTCAC-TG 943 |||||| || || ||||| | ||| |||| ||| || |||||||| ||| | || | Sbjct 621 TAATGCAGTGTCGTGGAG-A--AAGTTGTT---AGAGGTTAATATGAGACCATT-ACCTC 673 Query 944 GTTTTCAGTTTAA-TCGT-AGCTTTGGGAGTTTCTTCATTGTTGAGGAGAAAAATGTCGT 1001 | | || |||| || | | | | |||||||||||||||| ||| |||| || ||||| Sbjct 674 GATATC-GTTTTCGTCTTGACCAT-GGGAGTTTCTTCATTGACGAGAAGAATAAGGTCGT 731 Query 1002 TGTGGTTCCT--ATTAAAG--GAGG-GCATTTCAAAC--GAAACCTAGCTTACATCATTG 1054 |||||||| | || |||| || | | | |||| | ||| ||| ||| |||||| Sbjct 732 TGTGGTTC-TGGAT-AAAGACGAAGAG-ACGG-AAACCCGCAACTTAGTTTATTTCATTG 787 Query 1055 GAAAGGATGAATACTTCAAAGAAGTGGATCTTGGAGTGCC-A-AGTTCATATATATATTT 1112 || |||||| ||| |||||||||||||| || |||| | | || || | | | || Sbjct 788 GAGAGGATGGATATTTCAAAGAAGTGGAACTGGGAGAATCTAGAGG-CA-A-A-A-ATGG 842 Query 1113 TTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGTACAA 1152 ||| ||| |||| |||||||||||||||||| ||| ||| Sbjct 843 TTCTCCATTTGTGAGCTCTTATGTTCCAAGTTCAGTGCAA 882 > Ahg929516 jgi|Araly1|929516|scaffold_301973.1 Length=1193 Score = 165 bits (89), Expect = 7e-40 Identities = 703/982 (72%), Gaps = 112/982 (11%) Strand=Plus/Plus Query 1 ATGGCGATGTCCAATCTTCCA-AGAGATTTGTTGGAGGAGGT-ACTCTCT-AGGGTTCCG 57 ||||||||||| ||||| || || |||||| | || ||||| | ||| | || |||||| Sbjct 21 ATGGCGATGTCGGATCTTACACAG-GATTTGGTAGAAGAGGTGA-TCT-TGAGAGTTCCG 77 Query 58 GTAA-AGTCT-ATAGCAGCAGTGAGATCCACTTGTAAAAATTGGAACTCTTTA---ACCT 112 ||| | ||| ||| ||||||| |||| ||||| ||||| |||||| ||||| | Sbjct 78 CTAACA-TCTCATA-AAGCAGTGCGATCTACTTGCAAAAACTGGAACACTTTATCGAAAA 135 Query 113 ACGGTCA-GAGCTT--CACGAAGAAGCTCTATGGTAAAACAATG-GCAACAAAGGAAA-- 166 || | | |||||| | | | || | || || ||| ||| | ||| | || ||| Sbjct 136 AC-TTGATGAGCTTGAAAGGGATAAAC-CT-TGCCAAAGCAA-GAGCAGC-AA-CAAAGC 189 Query 167 AGGAGTTTCTGGTGGTCATGACT-ATGGATTTGGAGGTTTATTTAATGAGGGTCAATCTC 225 ||||||||||| || ||| | |||||||| |||||||| ||||||| | ||||| Sbjct 190 AGGAGTTTCTGACAATCGTGA-TAATGGATTTTAAGGTTTATCTAATGAGCTTTGATCTC 248 Query 226 CATGGAATTCATAAAGATGATAACAATGTTAAATCATCTATCATGCAAAAAGCTAAACTC 285 | |||| ||| | | |||| ||| | || ||| |||||| | || | ||| |||||| Sbjct 249 CGTGGACTTC--ACA-ATGACAACGACGTGGAATTATCTATAAAGCGAGAAGGTAAACTG 305 Query 286 ATTAGGCTAAATGATGATCGAGTTCGAGT-CGATGATATATGTAAAGTCTTTCACTGCGA 344 ||||| ||||| ||| | | || |||| || || ||| || |||||| ||||| | Sbjct 306 ATTAGCCTAAACGAT-A-C-AGAGGGAGTCCG-TG---TATCTAGAGTCTTGCACTG-TA 357 Query 345 -CGGTTTATTGTTATGCATCA-C---TATTGGGAT-C-AGGCTTGTGGTTTGTAATCCTT 397 |||||| ||||||||||||| | | | || | |||||||||||||| || |||| Sbjct 358 GCGGTTTGTTGTTATGCATCACCAAAGAATATAATCCGAGGCTTGTGGTTTGGAACCCTT 417 Query 398 ATTGTGGGCAAACAAGGTGTATCAAAACC-AGAAGAGATTACCATATAACCG-ACAATTA 455 || ||| ||||||||||| ||| |||| ||| | |||||| | || | |||| || Sbjct 418 GTTCTGGACAAACAAGGTGGATC-GAACCTAGAGGTTCTTACCACA-AAAAGAACAACTA 475 Query 456 CGCTCTTGGACACGAGAAGATGAAGAACAGCCCACT-TCGTAA-CTACAAAATCTTG-G- 511 ||||| ||| || | |||||||||||| | | ||| || |||||| || ||| | Sbjct 476 TGCTCTCGGATAC--G-AGATGAAGAACAAATC-TTGTCG-AAGCTACAAGATTTTGAGA 530 Query 512 TGTTT-CATG-ATA-AATCCTTCCTCCAA-AATTC-----T-TG-GTTTGAAATCTACAA 560 | ||| ||| || | | || | || |||| | || |||| |||||||||| Sbjct 531 TATTTGGATGCGTATGA-CATTAGTGTAAGGATTCTATATTGTGAGTTTCAAATCTACAA 589 Query 561 TTTTAACTCTGATTCATGGAAGG-TTTTATATTTCACTTGT-GACTGGAAAT-TACCGTT 617 |||| | ||| | |||||||||| | || | |||| | | |||| ||| || | || Sbjct 590 TTTTGATTCTAACTCATGGAAGGCTGTT-CAGGCCACTCCTCG-CTGG-AATATA-CATT 645 Query 618 -TTCTCAACTTGTTGTGTCTCTCAAGGGAAATACTTACTGGTTTGCTCGAGAGATGTATA 676 || ||||| || |||||||||||||||||||||||||||||||||| | | | | Sbjct 646 ATTATCAACGTGGGGTGTCTCTCAAGGGAAATACTTACTGGTTTGCTC-A-A-A-G---- 697 Query 677 TACACGGACCAAGAATAGATCTCCCTGATTTCTTGA-TTTGTTTTGATTTTACAACAGAG 735 |||| | | || | ||| | | |||||| | ||||||||||||||||| | ||| Sbjct 698 --CACGAATCTAGGAG-GATATA---G-TTTCTT-ACTTTGTTTTGATTTTACAGCTGAG 749 Query 736 AGATTTGGACCGCGTCTTCATCTGCCG-TTTCACTCTCGTTGT-GTTGATACTGTGACTC 793 ||||||||||||| ||| | | |||| ||| | | |||||| | ||||| ||||||| Sbjct 750 AGATTTGGACCGCCTCTGCCTATGCCTATTTT-C-CACGTTGTTGAAGATACCGTGACTC 807 Query 794 TCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTTATTTCAG-GAC-TCAAAAACGTTGAT 851 | ||||||| ||||| ||||| || || ||||||||| || ||| | | || | Sbjct 808 TATCTAGTGTCAGAGATGAGCAACTCGCAGTGTTATTTAAGCGACGTGGTGCA--TT-A- 863 Query 852 CCTA-G-AGGTATGGATAACG-ACTAAGATTGAGCCTA-ATGCGGTCTCATGGAGCAGCA 907 | || | || ||||||| ||| | | |||||| ||| | | | ||| || ||||| |||| Sbjct 864 CATATGGAGATATGGATTACGTA-TGAGATTGGGCCCAGA-GAGGTGTCGTGGAGGAGCA 921 Query 908 AGGTGTTCTTAGAAGTGAATAT 929 || ||||||||| |||||||| Sbjct 922 AGTTGTTCTTAGCGGTGAATAT 943 > Ahg342623 jgi|Araly1|342623|fgenesh1_pg.C_scaffold_3002386 Length=1329 Score = 143 bits (77), Expect = 3e-33 Identities = 344/464 (74%), Gaps = 54/464 (12%) Strand=Plus/Plus Query 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTTCATCTGCCGTTTCACTCTCGT 774 ||||||||||| |||| |||||||||| || | ||| ||| ||||||| |||| | ||| Sbjct 679 TGTTTTGATTTCACAAGAGAGAGATTTAGATCACGTTTTCCTCTGCCGATTCAG-C-CGT 736 Query 775 -TGTGTT-GATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTTATTTC 832 | | || ||||| |||| ||| |||||||||||||||||||||| ||||| ||||||| Sbjct 737 ATATTTTAGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTC 796 Query 833 AG-GACTCAAAA--A-C-GTTGATCCTAGA-GGT-AT--GGATAACGACTAAGA-TTGAG 882 || | ||||| | | | | ||| ||| || || ||||||| || || | ||||| Sbjct 797 AGCG-CTCAAGATTATCAGA-GATGG-AGATGGAGATCTGGATAACCACGAA-ACTTGAG 852 Query 883 CCTAATGCGGTCTCATGGAGCAGCAAGGTGTTCTTAG-AAGTGAATAT-GAGTCCACTCA 940 || || ||||| || |||| ||||||||||||||||| || || |||| | | || ||| Sbjct 853 CCCAACGCGGTGTCGTGGAACAGCAAGGTGTTCTTAGCAA-TGGATATTG-G-CCT-TCA 908 Query 941 CTGGTTTTCAGTTT-AA-TC-GTAGCTTTGGGAGTTTCTTCATTGTTGAGGAGAA-AAAT 996 | || |||||| || | | |||| | |||||||| || | ||||||||| ||| Sbjct 909 AT--TT--CAGTTTCAAGTTAG-AGCT--GCAAGTTTCTTTATCGATGAGGAGAAGAAA- 960 Query 997 GTCGTTGTGGTTCCT-ATTAAAG-GAGGGCAT-TTCAA-----ACG-A-AACCTAGCTTA 1046 || ||||||||| | || |||| || || || | || | ||| ||||||| Sbjct 961 GTTGTTGTGGTTTTTGAT-AAAGAGAAAAAATATTTAGTGTCCACTCACAACATAGCTTA 1019 Query 1047 CATCATTGGAAAGGATGAATAC-TTCAAAGAAGTGGATCTTGGAGTGCCAAGTTCATATA 1105 |||| ||||| |||||| | || || || |||||||||||||| | | | || | | Sbjct 1020 CATCTTTGGAGAGGATGGA-ACCTTGGAACAAGTGGATCTTGGATTATCT-G--CAGACA 1075 Query 1106 TATATTT-TTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGT 1148 || ||| || |||| |||||||| |||||||||||||||||| Sbjct 1076 AAT-TTTGTTATCCACTTGTGTGCTGTTATGTTCCAAGTTTAGT 1118 > Ahg930559 jgi|Araly1|930559|scaffold_303016.1 Length=1149 Score = 100 bits (54), Expect = 2e-20 Identities = 176/232 (76%), Gaps = 20/232 (9%) Strand=Plus/Plus Query 6 GATGTCCAATCTTCCAAGAGATTTGTTG-GAGGAGGTACTCTCTAGGGTTCCGGT-AAAG 63 ||||||||||||||| || |||||| | |||||||| |||| ||| ||||| | | | Sbjct 30 GATGTCCAATCTTCCCAGCGATTTG-GGCGAGGAGGTGCTCTGTAGAATTCCGTTGACA- 87 Query 64 TCTAT-AGCAGCAGTGAGATCCACTTGTAAAAATTGGAACTCTTTAACCTACGGTCAGAG 122 ||| | || | ||| |||| ||||| ||||| |||||| ||||| | | ||| |||| Sbjct 88 TCTCTGAG-AAAAGTCCGATCTACTTGCAAAAAGTGGAACACTTTATTCAAAGGTGAGAG 146 Query 123 CTTCACGAAGAAGCT--CTATGGT-A--AA--ACAA-TGGCAACAAAGGAAAAGGAGTTT 174 ||| |||||||| | || |||| | || | || | ||| ||| |||||| |||||| Sbjct 147 CTTTGCGAAGAAG-TACCT-TGGTGATCAAGCAAAAGTAGCAGCAACGGAAAAAGAGTTT 204 Query 175 CTGGTGGTCATGACT-ATGGA-TTTGGAGGTTTATTTAATGAGGGTCAATCT 224 || ||||||||| | ||||| ||| | ||||||||| ||| | |||||||| Sbjct 205 ATGATGGTCATGA-TGATGGATTTTAG-GGTTTATTTGATGCGCGTCAATCT 254 > Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1 Length=1236 Score = 100 bits (54), Expect = 2e-20 Identities = 98/118 (83%), Gaps = 7/118 (6%) Strand=Plus/Plus Query 1046 ACATCATTGGAAAGGATGAATAC-TTCAAAGAAGTGGATCTTGGAGTGCCAAGTTCATAT 1104 ||||| | ||| ||| || |||| || |||||||||||||| |||| || | | | | Sbjct 1019 ACATCGTGGGAGAGGCTGGATACGTT-AAAGAAGTGGATCTAGGAGAACC-TGATGACA- 1075 Query 1105 ATATA-TTTTTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAA 1161 | ||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1076 A-ATACTTTTT-CCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAA 1131 > Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1 Length=1263 Score = 100 bits (54), Expect = 2e-20 Identities = 172/227 (76%), Gaps = 16/227 (7%) Strand=Plus/Plus Query 6 GATGTCCAATCTTCCAAGAGATTTGTTGGAGGAGGTACTCTCTAGGGTTCCGGT-AAAGT 64 |||||||||||||||||||||||||| ||||||||| |||| ||| ||||| | | | | Sbjct 79 GATGTCCAATCTTCCAAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGACA-T 137 Query 65 CTATAGCA-G-CAGTGAGATCCACTTGTAAAAATTGGAACTCTTTAACCTACGGTCAGAG 122 || | | | | | || |||| ||||| ||||| |||| | ||||| || | || ||| Sbjct 138 CTCT-G-AGGCCTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAG 195 Query 123 CTTCACGAAGAAGC-TCTATGGTAAAACAATGGCAACA-AAGGAAAAGGAGTTTC-TGGT 179 ||| | ||||||| || || | || ||| | | || || | ||||||| ||| |||| Sbjct 196 CTTTGCAAAGAAGCACCT-TGCTCAAGCAAAAGTAGCAGAA-GCAAAGGAG-TTCATGGT 252 Query 180 GGTCATGACT-ATGGA-TTTGGAGGTTTATTTAATGAGGGTCAATCT 224 |||||||| | | | | ||| | ||||||||| ||||| |||||||| Sbjct 253 GGTCATGA-TGAAGAATTTTAG-GGTTTATTTGATGAGAGTCAATCT 297 > Ahg485308 jgi|Araly1|485308|fgenesh2_kg.5__1300__AT3G49510.1 Length=2011 Score = 97.1 bits (52), Expect = 3e-19 Identities = 100/122 (82%), Gaps = 8/122 (7%) Strand=Plus/Plus Query 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTT-CATCTGCCGTTTCACTCTC- 772 |||||||||||||||||||||||||||||||| ||| || | ||||| ||||||| ||| Sbjct 719 TGTTTTGATTTTACAACAGAGAGATTTGGACCACGT-TTGCCTCTGCTGTTTCACCCTCC 777 Query 773 --GT--T-GTGTTGATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTT 827 || | || |||| ||||||||||| || | |||||||| ||| |||| || ||||| Sbjct 778 ATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGTGTT 837 Query 828 AT 829 || Sbjct 838 AT 839 > Ahg929515 jgi|Araly1|929515|scaffold_301972.1 Length=943 Score = 93.5 bits (50), Expect = 3e-18 Identities = 98/120 (82%), Gaps = 8/120 (7%) Strand=Plus/Plus Query 546 GTTTGAAATCTACAATTTTAACTCTGATTCATGGAAGGTT-TTATAT-TTCACTTGTGAC 603 |||||| ||||||||| || ||||| | ||||||||| || ||| || || ||| | | | Sbjct 494 GTTTGAGATCTACAATCTTGACTCTAACTCATGGAAGATTCTTA-ATGTT-ACTCGCGTC 551 Query 604 TGGAA-ATTACCGTT-TTCTCAACTTGTTGTGTCTCTCAAGGGAAATACTTACTGGTTTG 661 |||| | |||| || || ||||| || ||||||||||||||||||||||||||||||| Sbjct 552 GGGAAGA-TACC-TTATTATCAACGTGGCGTGTCTCTCAAGGGAAATACTTACTGGTTTG 609 > Ahg930371 jgi|Araly1|930371|scaffold_302828.1 Length=984 Score = 84.2 bits (45), Expect = 2e-15 Identities = 80/96 (83%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 329 AAGTCTTTCACTGCGACGGTTTATTGTTATGCATCACT-ATTGGGATC---AGGCTTGTG 384 ||||||||||||||||||||||||||||||||||| || | | | | ||||||||| Sbjct 285 AAGTCTTTCACTGCGACGGTTTATTGTTATGCATC-CTGAAAGACAACCCTAGGCTTGTG 343 Query 385 GTTTGTAATCCTTATTGTGGGCAAACAAGGTGTATC 420 ||||| || || |||||||||||||| |||| ||| Sbjct 344 GTTTGGAACCCGTATTGTGGGCAAACCCGGTGGATC 379 > Ahg930556 jgi|Araly1|930556|scaffold_303013.1 Length=272 Score = 75.0 bits (40), Expect = 1e-12 Identities = 137/181 (76%), Gaps = 17/181 (9%) Strand=Plus/Plus Query 247 AACAATGTTAAATCATCTATCATGCAAAAAGCTAAACTCATTAGGCTAAATGATGATCGA 306 ||||| ||| |||||| ||| | || |||||||||| ||||| ||| | ||| || | Sbjct 72 AACAACGTTGAATCATGTATAAAGCGTGAAGCTAAACTTATTAGCCTAGACGAT--TC-A 128 Query 307 GTTCG-AGTCGATGATATATGTAAAGTCT-TTCACTGCGACGGTTTATTGTTATGCATCA 364 ||| | ||| |||| || | | ||| | |||||||||||||||||||||||||||||| Sbjct 129 GTT-GAAGTAGATG-TA-A-CTCGAGT-TGTTCACTGCGACGGTTTATTGTTATGCATCA 183 Query 365 CTATTGGG-AT-C-AGGCTT-GTGGTTTGTAATCCTTATTGTGGG-CAAACAAGGTGTAT 419 ||| | | | | | || ||||||||||| || |||| |||| ||||| |||| || Sbjct 184 CTAAAGACTACACTAAG-TTCGTGGTTTGTAACCCGTATT-TGGGGCAAACCCGGTGGAT 241 Query 420 C 420 | Sbjct 242 C 242 > Ahg342182 jgi|Araly1|342182|fgenesh1_pg.C_scaffold_3001945 Length=981 Score = 75.0 bits (40), Expect = 1e-12 Identities = 83/103 (81%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 329 AAGTCTTTCACTGCGACGGTTTATTGTTATGCATCACT-ATTGGGATC---AGGCTTGTG 384 ||||||||||||||||||||||||||||||||||| || | | | | ||||| || Sbjct 221 AAGTCTTTCACTGCGACGGTTTATTGTTATGCATC-CTGAAAGACAACCCTAGGCTCGTT 279 Query 385 GTTTGTAATCCTTATTGTGGGCAAACAAGGTGTATCAAAACCA 427 |||| ||| || |||||||||||| || |||| ||| || ||| Sbjct 280 GTTTTTAACCCGTATTGTGGGCAACCACGGTGGATCGAAGCCA 322 > Ahg312135 jgi|Araly1|312135|fgenesh1_pm.C_scaffold_1000915 Length=1782 Score = 75.0 bits (40), Expect = 1e-12 Identities = 121/157 (77%), Gaps = 18/157 (11%) Strand=Plus/Plus Query 323 TATGTAAAGTCTTTCACTGCGACGGTTTATTGTTATGC--A-TCACT-ATTGG---GA-T 374 ||| |||| ||||||||||||||||||||||||||||| | ||| || | || | Sbjct 977 TATCTAAAATCTTTCACTGCGACGGTTTATTGTTATGCGTAATCAAAGAT-GACACGAAT 1035 Query 375 CAGGCT-TGTGGTTTGTAATCCTTATTGTGGG-CAAACAAGGTGTATCAAAACCAGA-AG 431 || || | |||| || |||||||||| |||| ||||| ||||| ||| || ||||| || Sbjct 1036 AAG-CTCT-TGGTCTGGAATCCTTATT-TGGGGCAAACGAGGTGGATCCAACCCAGACAG 1092 Query 432 AGATTAC-CATATAACCGACAATTACGCTCTTGGACA 467 || || | || || | |||| ||| ||||||||||| Sbjct 1093 AGTTTCCACAGATTA--GACAGTTATGCTCTTGGACA 1127 > Ahg913019 jgi|Araly1|913019|Al_scaffold_0001_3273 Length=1800 Score = 73.1 bits (39), Expect = 4e-12 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTTCATCTGCCGTTT 765 ||||||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct 1285 TGTTTTGATTTTACAACAGAGAGATTTGGACAGATTCTTCCTCTGCCGTTT 1335 > Ahg318446 jgi|Araly1|318446|fgenesh1_pm.C_scaffold_3001462 Length=918 Score = 69.4 bits (37), Expect = 6e-11 Identities = 42/44 (95%), Gaps = 1/44 (2%) Strand=Plus/Plus Query 631 GTGTCTCTCAAGGGAAATACTTACTGGTTTGCTCGAGAG-ATGT 673 ||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 388 GTGTCTCTCAAGGGAAATACTTACTGGTTTGCTAGAGAGTATGT 431 > Ahg333377 jgi|Araly1|333377|fgenesh1_pm.C_scaffold_672000001 Length=1047 Score = 62.1 bits (33), Expect = 1e-08 Identities = 73/91 (80%), Gaps = 7/91 (8%) Strand=Plus/Plus Query 335 TTCACTGCGACGGTTTATTGTTATGCATCACTATTGGG-AT-C-AGGCTT-GTGGTTTGT 390 ||||||||||||||||||||||||||||||||| | | | | | || ||||||||| Sbjct 251 TTCACTGCGACGGTTTATTGTTATGCATCACTAAAGACTACACTAAG-TTCGTGGTTTGT 309 Query 391 AATCCTTATTGTGGG-CAAACAAGGTGTATC 420 || || |||| |||| ||||| |||| ||| Sbjct 310 AACCCGTATT-TGGGGCAAACCCGGTGGATC 339 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46052483736 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5